메뉴 건너뛰기




Volumn 60, Issue 3, 2006, Pages 423-435

Lower levels of transgene silencing in roots is associated with reduced DNA methylation levels at non-symmetrical sites but not at symmetrical sites

Author keywords

DNA methylation; RNA silencing; Root tissue; Transposon silencing

Indexed keywords

DNA; RNA; TISSUE;

EID: 33644661422     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-005-4429-7     Document Type: Article
Times cited : (19)

References (44)
  • 1
    • 13944266825 scopus 로고    scopus 로고
    • Evidence that RNA silencing-mediated resistance to Beet necrotic yellow vein virus is less effective in roots than in leaves
    • I.B. Andika H. Kondo T. Tamada 2005 Evidence that RNA silencing-mediated resistance to Beet necrotic yellow vein virus is less effective in roots than in leaves Mol. Plant-Microbe Interact. 18 194 204
    • (2005) Mol. Plant-Microbe Interact. , vol.18 , pp. 194-204
    • Andika, I.B.1    Kondo, H.2    Tamada, T.3
  • 3
    • 0034724519 scopus 로고    scopus 로고
    • Double-stranded RNA as a template for gene silencing
    • B.L. Bass 2000 Double-stranded RNA as a template for gene silencing Cell 101 235 238
    • (2000) Cell , vol.101 , pp. 235-238
    • Bass, B.L.1
  • 4
    • 0035958551 scopus 로고    scopus 로고
    • A vicious cycle: RNA silencing and DNA methylation in plants
    • J. Bender 2001 A vicious cycle: RNA silencing and DNA methylation in plants Cell 106 129 132
    • (2001) Cell , vol.106 , pp. 129-132
    • Bender, J.1
  • 5
    • 0035905766 scopus 로고    scopus 로고
    • Role for a bidentate ribonuclease in the initiation step of RNA interference
    • E. Bernstein A.A. Caudy S.M. Hammond G.J. Hannon 2001 Role for a bidentate ribonuclease in the initiation step of RNA interference Nature 409 363 366
    • (2001) Nature , vol.409 , pp. 363-366
    • Bernstein, E.1    Caudy, A.A.2    Hammond, S.M.3    Hannon, G.J.4
  • 6
    • 0141450300 scopus 로고    scopus 로고
    • Plant stem cells: Divergent pathways and common themes in shoots and roots
    • M.E. Byrne C.A. Kidner R.A. Martienssen 2003 Plant stem cells: divergent pathways and common themes in shoots and roots Curr. Opin. Genet. Dev. 13 551 557
    • (2003) Curr. Opin. Genet. Dev. , vol.13 , pp. 551-557
    • Byrne, M.E.1    Kidner, C.A.2    Martienssen, R.A.3
  • 7
    • 0037046810 scopus 로고    scopus 로고
    • Role of the Arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing
    • X. Cao S.E. Jacobsen 2002 Role of the Arabidopsis DRM methyltransferases in de novo DNA methylation and gene silencing Curr. Biol. 12 1138 1144
    • (2002) Curr. Biol. , vol.12 , pp. 1138-1144
    • Cao, X.1    Jacobsen, S.E.2
  • 9
    • 0034716924 scopus 로고    scopus 로고
    • An RNA-dependent RNA polymerase gene in Arabidopsis is required for post-transcriptional gene silencing mediated by a transgene but not by a virus
    • T. Dalmay A. Hamilton S. Rudd S. Angell D.C. Baulcombe 2000 An RNA-dependent RNA polymerase gene in Arabidopsis is required for post-transcriptional gene silencing mediated by a transgene but not by a virus Cell 101 543 553
    • (2000) Cell , vol.101 , pp. 543-553
    • Dalmay, T.1    Hamilton, A.2    Rudd, S.3    Angell, S.4    Baulcombe, D.C.5
  • 10
    • 0034888594 scopus 로고    scopus 로고
    • Silencing of antibody genes in plants with single-copy transgene inserts as a result of gene dosage effects
    • C. De Wilde N. Podevin P. Windels A. Depicker 2001 Silencing of antibody genes in plants with single-copy transgene inserts as a result of gene dosage effects Mol. Genet. Genom. 265 647 653
    • (2001) Mol. Genet. Genom. , vol.265 , pp. 647-653
    • De Wilde, C.1    Podevin, N.2    Windels, P.3    Depicker, A.4
  • 11
    • 0030880142 scopus 로고    scopus 로고
    • Requirement of sense transcription for homology-dependent virus and trans-inactivation
    • J.J. English G.F. Davenport T. Elmayan H. Vaucheret D.C. Baulcombe 1997 Requirement of sense transcription for homology-dependent virus and trans-inactivation Plant J. 12 597 603
    • (1997) Plant J. , vol.12 , pp. 597-603
    • English, J.J.1    Davenport, G.F.2    Elmayan, T.3    Vaucheret, H.4    Baulcombe, D.C.5
  • 12
    • 0034633770 scopus 로고    scopus 로고
    • AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals
    • M. Fagard S. Boutet J.B. Morel C. Bellini H. Vaucheret 2000 AGO1, QDE-2, and RDE-1 are related proteins required for post-transcriptional gene silencing in plants, quelling in fungi, and RNA interference in animals Proc. Natl. Acad. Sci. USA 97 11650 11654
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 11650-11654
    • Fagard, M.1    Boutet, S.2    Morel, J.B.3    Bellini, C.4    Vaucheret, H.5
  • 13
    • 0024978849 scopus 로고
    • Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics
    • M.A. Grandbastien A. Spielmann M. Caboche 1989 Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics Nature 337 376 380
    • (1989) Nature , vol.337 , pp. 376-380
    • Grandbastien, M.A.1    Spielmann, A.2    Caboche, M.3
  • 14
    • 17844364875 scopus 로고    scopus 로고
    • Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing
    • A. Grishok A.E. Pasquinelli D. Conte N. Li S. Parrish I. Ha D.L. Baillie A. Fire G. Ruvkun C.C. Mello 2001 Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing Cell 106 23 34
    • (2001) Cell , vol.106 , pp. 23-34
    • Grishok, A.1    Pasquinelli, A.E.2    Conte, D.3    Li, N.4    Parrish, S.5    Ha, I.6    Baillie, D.L.7    Fire, A.8    Ruvkun, G.9    Mello, C.C.10
  • 15
    • 0033615491 scopus 로고    scopus 로고
    • A species of small antisense RNA in post-transcriptional gene silencing in plants
    • A.J. Hamilton D.C. Baulcombe 1999 A species of small antisense RNA in post-transcriptional gene silencing in plants Science 286 950 952
    • (1999) Science , vol.286 , pp. 950-952
    • Hamilton, A.J.1    Baulcombe, D.C.2
  • 16
    • 0037009520 scopus 로고    scopus 로고
    • Two classes of short interfering RNA in RNA silencing
    • A. Hamilton O. Voinnet L. Chappell D.C. Baulcombe 2002 Two classes of short interfering RNA in RNA silencing EMBO J. 21 4671 4679
    • (2002) EMBO J. , vol.21 , pp. 4671-4679
    • Hamilton, A.1    Voinnet, O.2    Chappell, L.3    Baulcombe, D.C.4
  • 17
    • 0034673638 scopus 로고    scopus 로고
    • An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells
    • S.M. Hammond E. Bernstein D. Beach G.J. Hannon 2000 An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells Nature 404 293 296
    • (2000) Nature , vol.404 , pp. 293-296
    • Hammond, S.M.1    Bernstein, E.2    Beach, D.3    Hannon, G.J.4
  • 18
    • 0037062951 scopus 로고    scopus 로고
    • RNA interference
    • G.J. Hannon 2002 RNA interference Nature 418 244 251
    • (2002) Nature , vol.418 , pp. 244-251
    • Hannon, G.J.1
  • 19
    • 14844295120 scopus 로고    scopus 로고
    • RNA polymerase IV directs silencing of endogenous DNA
    • A.J. Herr M.B. Jensen T. Dalmay D.C. Baulcombe 2005 RNA polymerase IV directs silencing of endogenous DNA Science 308 118 120
    • (2005) Science , vol.308 , pp. 118-120
    • Herr, A.J.1    Jensen, M.B.2    Dalmay, T.3    Baulcombe, D.C.4
  • 20
    • 0032739015 scopus 로고    scopus 로고
    • Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD
    • R.F. Ketting T.H. Haverkamp H.G. van Luenen R.H Plasterk 1999 mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD Cell 99 133 141
    • (1999) Cell , vol.99 , pp. 133-141
    • Ketting, R.F.1    Haverkamp, T.H.2    Van Luenen, H.G.3    Plasterk, R.H.4
  • 21
    • 0035887005 scopus 로고    scopus 로고
    • Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans
    • R.F. Ketting S.E. Fischer E. Bernstein T. Sijen G.J. Hannon R.H. Plasterk 2001 Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans Genes Dev. 15 2654 2659
    • (2001) Genes Dev. , vol.15 , pp. 2654-2659
    • Ketting, R.F.1    Fischer, S.E.2    Bernstein, E.3    Sijen, T.4    Hannon, G.J.5    Plasterk, R.H.6
  • 22
    • 0042266808 scopus 로고    scopus 로고
    • Gene silencing by expression of hairpin RNA in Lotus japonicus roots and root nodules
    • H. Kumagai H. Kouchi 2003 Gene silencing by expression of hairpin RNA in Lotus japonicus roots and root nodules Mol. Plant-Microbe Interact. 16 663 668
    • (2003) Mol. Plant-Microbe Interact. , vol.16 , pp. 663-668
    • Kumagai, H.1    Kouchi, H.2
  • 24
    • 0027145973 scopus 로고
    • Induction of highly specific antiviral state in transgenic plants: Implication of regulation of gene expression and virus resistance
    • J.A. Lindbo L. Silva-Rosales W.M. Proebsting W.G. Dougherty 1993 Induction of highly specific antiviral state in transgenic plants: implication of regulation of gene expression and virus resistance Plant Cell 5 1749 1759
    • (1993) Plant Cell , vol.5 , pp. 1749-1759
    • Lindbo, J.A.1    Silva-Rosales, L.2    Proebsting, W.M.3    Dougherty, W.G.4
  • 25
    • 8744234971 scopus 로고    scopus 로고
    • RNA-directed DNA methylation
    • O. Mathieu J. Bender 2004 RNA-directed DNA methylation J. Cell Sci. 117 4881 4888
    • (2004) J. Cell Sci. , vol.117 , pp. 4881-4888
    • Mathieu, O.1    Bender, J.2
  • 26
    • 0035837378 scopus 로고    scopus 로고
    • Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis
    • A. Miura S. Yonebayashi K. Watanabe T. Toyama H. Shimada T. Kakutani 2001 Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis Nature 411 212 214
    • (2001) Nature , vol.411 , pp. 212-214
    • Miura, A.1    Yonebayashi, S.2    Watanabe, K.3    Toyama, T.4    Shimada, H.5    Kakutani, T.6
  • 27
    • 0034649547 scopus 로고    scopus 로고
    • DNA methylation and chromatin structure affect transcriptional and post-transcriptional transgene silencing in Arabidopsis
    • J.B. Morel P. Mourrain C. Beclin H. Vaucheret 2000 DNA methylation and chromatin structure affect transcriptional and post-transcriptional transgene silencing in Arabidopsis Curr. Biol. 10 1591 1594
    • (2000) Curr. Biol. , vol.10 , pp. 1591-1594
    • Morel, J.B.1    Mourrain, P.2    Beclin, C.3    Vaucheret, H.4
  • 29
    • 0001359591 scopus 로고
    • Introduction of a chimeric chalcone synthase gene into Petunia results in reversible co-suppression of homologous genes in trans
    • C. Napoli C. Lemieux R. Jorgensen 1990 Introduction of a chimeric chalcone synthase gene into Petunia results in reversible co-suppression of homologous genes in trans Plant Cell 2 279 289
    • (1990) Plant Cell , vol.2 , pp. 279-289
    • Napoli, C.1    Lemieux, C.2    Jorgensen, R.3
  • 30
    • 0035798415 scopus 로고    scopus 로고
    • ATP requirements and small interfering RNA structure in the RNA interference pathway
    • A. Nykänen B. Haley P.D. Zamore 2001 ATP requirements and small interfering RNA structure in the RNA interference pathway Cell 107 309 321
    • (2001) Cell , vol.107 , pp. 309-321
    • Nykänen, A.1    Haley, B.2    Zamore, P.D.3
  • 31
    • 0030875953 scopus 로고    scopus 로고
    • Systemic acquired silencing: Transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions
    • J.C. Palauqui T. Elmayan J.M. Pollien H. Vaucheret 1997 Systemic acquired silencing: transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions EMBO J. 16 4738 4745
    • (1997) EMBO J. , vol.16 , pp. 4738-4745
    • Palauqui, J.C.1    Elmayan, T.2    Pollien, J.M.3    Vaucheret, H.4
  • 32
    • 0032212130 scopus 로고    scopus 로고
    • Urea improves efficiency of bisulphite-mediated sequencing of 5′-methylcytosine in genomic DNA
    • R. Paulin G.W. Grigg M.W. Davey A.A. Piper 1998 Urea improves efficiency of bisulphite-mediated sequencing of 5′-methylcytosine in genomic DNA Nucl. Acids Res. 26 5009 5010
    • (1998) Nucl. Acids Res. , vol.26 , pp. 5009-5010
    • Paulin, R.1    Grigg, G.W.2    Davey, M.W.3    Piper, A.A.4
  • 33
    • 0030992349 scopus 로고    scopus 로고
    • A similarity between viral defense and gene silencing in plants
    • F. Ratcliff B.D. Harrison D.C. Baulcombe 1997 A similarity between viral defense and gene silencing in plants Science 276 1558 1560
    • (1997) Science , vol.276 , pp. 1558-1560
    • Ratcliff, F.1    Harrison, B.D.2    Baulcombe, D.C.3
  • 34
    • 3643145804 scopus 로고    scopus 로고
    • Initiation and maintenance of virus-induced gene silencing
    • M.T. Ruiz O. Voinnet D.C. Baulcombe 1998 Initiation and maintenance of virus-induced gene silencing Plant Cell 10 937 946
    • (1998) Plant Cell , vol.10 , pp. 937-946
    • Ruiz, M.T.1    Voinnet, O.2    Baulcombe, D.C.3
  • 36
    • 4344673602 scopus 로고    scopus 로고
    • Transgene overexpression with cognate small interfering RNA in tobacco
    • R. Tomita T. Hamada G. Horiguchi K. Iba H. Kodama 2004 Transgene overexpression with cognate small interfering RNA in tobacco FEBS Lett. 573 117 120
    • (2004) FEBS Lett. , vol.573 , pp. 117-120
    • Tomita, R.1    Hamada, T.2    Horiguchi, G.3    Iba, K.4    Kodama, H.5
  • 37
  • 38
    • 0035933512 scopus 로고    scopus 로고
    • RNA silencing in plants - Defense and counterdefense
    • V. Vance H. Vaucheret 2001 RNA silencing in plants - defense and counterdefense Science 292 2277 2280
    • (2001) Science , vol.292 , pp. 2277-2280
    • Vance, V.1    Vaucheret, H.2
  • 39
    • 0030798444 scopus 로고    scopus 로고
    • Systemic signalling in gene silencing
    • O. Voinnet D.C. Baulcombe 1997 Systemic signalling in gene silencing Nature 389 553
    • (1997) Nature , vol.389 , pp. 553
    • Voinnet, O.1    Baulcombe, D.C.2
  • 40
    • 0032538348 scopus 로고    scopus 로고
    • Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA
    • O. Voinnet P. Vain S. Angell D.C. Baulcombe 1998 Systemic spread of sequence-specific transgene RNA degradation in plants is initiated by localized introduction of ectopic promoterless DNA Cell 95 177 187
    • (1998) Cell , vol.95 , pp. 177-187
    • Voinnet, O.1    Vain, P.2    Angell, S.3    Baulcombe, D.C.4
  • 41
    • 0032506226 scopus 로고    scopus 로고
    • Virus resistance and gene silencing in plants can be induced by simultaneous expression of sense and antisense RNA
    • P.M. Waterhouse M.W. Graham M.B. Wang 1998 Virus resistance and gene silencing in plants can be induced by simultaneous expression of sense and antisense RNA Proc. Natl. Acad. Sci. USA 95 13959 13964
    • (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 13959-13964
    • Waterhouse, P.M.1    Graham, M.W.2    Wang, M.B.3
  • 42
    • 0034634360 scopus 로고    scopus 로고
    • Transgene and transposon silencing in Chlamydomonas reinhardtii by a DEAH-box RNA helicase
    • D. Wu-Scharf B. Jeong C. Zhang H. Cerutti 2000 Transgene and transposon silencing in Chlamydomonas reinhardtii by a DEAH-box RNA helicase Science 290 1159 1162
    • (2000) Science , vol.290 , pp. 1159-1162
    • Wu-Scharf, D.1    Jeong, B.2    Zhang, C.3    Cerutti, H.4
  • 44
    • 0027260466 scopus 로고
    • Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs
    • Y. Yoshioka S. Matsumoto S. Kojima K. Ohshima N. Okada Y. Machida 1993 Molecular characterization of a short interspersed repetitive element from tobacco that exhibits sequence homology to specific tRNAs Proc. Natl. Acad. Sci. USA 90 6562 6566
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 6562-6566
    • Yoshioka, Y.1    Matsumoto, S.2    Kojima, S.3    Ohshima, K.4    Okada, N.5    MacHida, Y.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.