-
1
-
-
0000577868
-
The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex
-
Anderson JSJ, Parker RP (1998) The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex. EMBO J 17: 1497-1506
-
(1998)
EMBO J
, vol.17
, pp. 1497-1506
-
-
Anderson, J.S.J.1
Parker, R.P.2
-
2
-
-
0029758321
-
An essential component of the decapping enzyme required for normal rates of mRNA turnover
-
Beelman CA, Stevens A, Caponigro G, LaGrandeur TE, Hatfield L, Fortner DM, Parker R (1996) An essential component of the decapping enzyme required for normal rates of mRNA turnover. Nature 382: 642-646
-
(1996)
Nature
, vol.382
, pp. 642-646
-
-
Beelman, C.A.1
Stevens, A.2
Caponigro, G.3
LaGrandeur, T.E.4
Hatfield, L.5
Fortner, D.M.6
Parker, R.7
-
3
-
-
0024323801
-
Poly(A), poly(A) binding protein and the regulation of mRNA stability
-
Bernstein P, Ross J (1989) Poly(A), poly(A) binding protein and the regulation of mRNA stability, Trends Biochem Sci 14: 373-377
-
(1989)
Trends Biochem Sci
, vol.14
, pp. 373-377
-
-
Bernstein, P.1
Ross, J.2
-
4
-
-
0032567527
-
Characterization of c-myc 3′ to 5′ mRNA decay activities in an in vitro system
-
Brewer G (1998) Characterization of c-myc 3′ to 5′ mRNA decay activities in an in vitro system, J Biol Chem 273: 34770-34774
-
(1998)
J Biol Chem
, vol.273
, pp. 34770-34774
-
-
Brewer, G.1
-
5
-
-
0025762042
-
The multiple RNA-binding domains of the mRNA poly(A)-binding protein have different RNA-binding activities
-
Burd CG, Matunis EL, Dreyfuss G (1991) The multiple RNA-binding domains of the mRNA poly(A)-binding protein have different RNA-binding activities. Mol Cell Biol 11: 3419-3424
-
(1991)
Mol Cell Biol
, vol.11
, pp. 3419-3424
-
-
Burd, C.G.1
Matunis, E.L.2
Dreyfuss, G.3
-
6
-
-
0028809873
-
Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast
-
Caponigro G, Parker R (1995) Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast, Genes Dev 9: 2421-2432
-
(1995)
Genes Dev
, vol.9
, pp. 2421-2432
-
-
Caponigro, G.1
Parker, R.2
-
7
-
-
18044371822
-
AU binding proteins recruit the exosome to degrade ARE-containing mRNAs
-
Chen CY, Gherzi R, Ong SE, Chan EL, Raijmakers R, Pruijn GJ, Stoecklin G, Moroni C, Mann M, Karin M (2001) AU binding proteins recruit the exosome to degrade ARE-containing mRNAs. Cell 107: 451-464
-
(2001)
Cell
, vol.107
, pp. 451-464
-
-
Chen, C.Y.1
Gherzi, R.2
Ong, S.E.3
Chan, E.L.4
Raijmakers, R.5
Pruijn, G.J.6
Stoecklin, G.7
Moroni, C.8
Mann, M.9
Karin, M.10
-
8
-
-
0028095580
-
Mechanisms of mRNA degradation in eukaryotes
-
Decker CJ, Parker R (1994) Mechanisms of mRNA degradation in eukaryotes. Trends Biochem Sci 19: 336-340
-
(1994)
Trends Biochem Sci
, vol.19
, pp. 336-340
-
-
Decker, C.J.1
Parker, R.2
-
9
-
-
0033578927
-
Recognition of polyadenylate RNA by the poly(A)-binding protein
-
Deo RC, Bonanno JB, Sonenberg N, Burley SK (1999) Recognition of polyadenylate RNA by the poly(A)-binding protein. Cell 98: 835-845
-
(1999)
Cell
, vol.98
, pp. 835-845
-
-
Deo, R.C.1
Bonanno, J.B.2
Sonenberg, N.3
Burley, S.K.4
-
10
-
-
0033214061
-
The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif
-
Dunckley T, Parker R (1999) The DCP2 protein is required for mRNA decapping in Saccharomyces cerevisiae and contains a functional MutT motif. EMBO J 18: 5411-5422
-
(1999)
EMBO J
, vol.18
, pp. 5411-5422
-
-
Dunckley, T.1
Parker, R.2
-
11
-
-
0033557214
-
3′-Terminal RNA structures and poly(U) tracts inhibit initiation by a 3′ → 5′ exonuclease in vitro
-
Ford LP, Wilusz J (1999) 3′-Terminal RNA structures and poly(U) tracts inhibit initiation by a 3′ → 5′ exonuclease in vitro. Nucleic Acids Res 27: 1159-1167
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1159-1167
-
-
Ford, L.P.1
Wilusz, J.2
-
12
-
-
0023238720
-
Human mRNA polyadenylate binding protein: Evolutionary conservation of a nucleic acid binding motif
-
Grange T, de Sa CM, Oddos J, Pictet R (1987) Human mRNA polyadenylate binding protein: evolutionary conservation of a nucleic acid binding motif. Nucleic Acids Res 15: 4771-4787
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 4771-4787
-
-
Grange, T.1
De Sa, C.M.2
Oddos, J.3
Pictet, R.4
-
13
-
-
0027214097
-
Yeast cells lacking 5′ → 3′ exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5′ cap structure
-
Hsu CL, Stevens A (1993) Yeast cells lacking 5′ → 3′ exoribonuclease 1 contain mRNA species that are poly(A) deficient and partially lack the 5′ cap structure. Mol Cell Biol 13: 4826-4835
-
(1993)
Mol Cell Biol
, vol.13
, pp. 4826-4835
-
-
Hsu, C.L.1
Stevens, A.2
-
14
-
-
0036909093
-
The human LSml-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrnl in distinct cytoplasmic foci
-
Ingelfinger D, Arndt-Jovin DJ, Luhrmann R, Achsel T (2002) The human LSml-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrnl in distinct cytoplasmic foci. RNA 8: 1489-1501
-
(2002)
RNA
, vol.8
, pp. 1489-1501
-
-
Ingelfinger, D.1
Arndt-Jovin, D.J.2
Luhrmann, R.3
Achsel, T.4
-
15
-
-
0035823036
-
Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CBP20
-
Ishigaki Y, Li X, Serin G, Maquat LE (2001) Evidence for a pioneer round of mRNA translation: mRNAs subject to nonsense-mediated decay in mammalian cells are bound by CBP80 and CBP20. Cell 106: 607-617
-
(2001)
Cell
, vol.106
, pp. 607-617
-
-
Ishigaki, Y.1
Li, X.2
Serin, G.3
Maquat, L.E.4
-
16
-
-
0000577868
-
The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex
-
Jacobs JS, Anderson AR, Parker RP (1998) The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex. EMBO J 17: 1497-1506
-
(1998)
EMBO J
, vol.17
, pp. 1497-1506
-
-
Jacobs, J.S.1
Anderson, A.R.2
Parker, R.P.3
-
17
-
-
0029973094
-
Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells
-
Jacobson A, Peltz SW (1996) Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells. Annu Rev Biochem 65: 693-739
-
(1996)
Annu Rev Biochem
, vol.65
, pp. 693-739
-
-
Jacobson, A.1
Peltz, S.W.2
-
18
-
-
0036152693
-
Identification of target messenger RNA substrates for the murine deleted in azoospermia-like RNA-binding protein
-
Jiao X, Trifillis P, Kiledjian M (2002) Identification of target messenger RNA substrates for the murine deleted in azoospermia-like RNA-binding protein. Biol Reprod 66: 475-485
-
(2002)
Biol Reprod
, vol.66
, pp. 475-485
-
-
Jiao, X.1
Trifillis, P.2
Kiledjian, M.3
-
19
-
-
0026740718
-
Primary structure and binding activity of the hnRNP U protein: Binding RNA through RGG box
-
Kiledjian M, Dreyfuss G (1992) Primary structure and binding activity of the hnRNP U protein: binding RNA through RGG box. EMBO J 11: 2655-2664
-
(1992)
EMBO J
, vol.11
, pp. 2655-2664
-
-
Kiledjian, M.1
Dreyfuss, G.2
-
20
-
-
0029125496
-
Identification of two KH domain proteins in the alpha-globin mRNP stability complex
-
Kiledjian M, Wang X, Liebhaber SA (1995) Identification of two KH domain proteins in the alpha-globin mRNP stability complex. EMBO J 14: 4357-4364
-
(1995)
EMBO J
, vol.14
, pp. 4357-4364
-
-
Kiledjian, M.1
Wang, X.2
Liebhaber, S.A.3
-
21
-
-
0038063499
-
Xenopus poly(A) binding protein: Functional domains in RNA binding and protein-protein interaction
-
Kuhn U, Pieler T (1996) Xenopus poly(A) binding protein: functional domains in RNA binding and protein-protein interaction. J Mol Biol 256: 20-30
-
(1996)
J Mol Biol
, vol.256
, pp. 20-30
-
-
Kuhn, U.1
Pieler, T.2
-
22
-
-
0037009517
-
The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases
-
Liu H, Rodgers ND, Jiao X, Kiledjian M (2002) The scavenger mRNA decapping enzyme DcpS is a member of the HIT family of pyrophosphatases. EMBO J 21: 4699-4708
-
(2002)
EMBO J
, vol.21
, pp. 4699-4708
-
-
Liu, H.1
Rodgers, N.D.2
Jiao, X.3
Kiledjian, M.4
-
23
-
-
0036888905
-
Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay
-
Lykke-Andersen J (2002) Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay. Mol Cell Biol 22: 8114-8121
-
(2002)
Mol Cell Biol
, vol.22
, pp. 8114-8121
-
-
Lykke-Andersen, J.1
-
24
-
-
0030821226
-
The Elav-like proteins bind to AU-rich elements and to the poly(A) tail of mRNA
-
Ma WJ, Chung S, Furneaux H (1997) The Elav-like proteins bind to AU-rich elements and to the poly(A) tail of mRNA. Nucleic Acids Res 25: 3564-3569
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3564-3569
-
-
Ma, W.J.1
Chung, S.2
Furneaux, H.3
-
25
-
-
0038487811
-
Poly(A)-binding proteins: Multifunctional scaffolds for the post-transcriptional control of gene expression
-
Mangus DA, Evans MC, Jacobson A (2003) Poly(A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression. Genome Biol 4: 223
-
(2003)
Genome Biol
, vol.4
, pp. 223
-
-
Mangus, D.A.1
Evans, M.C.2
Jacobson, A.3
-
26
-
-
0030702085
-
The exosome: A conserved eukaryotic RNA processing complex containing multiple 3′ → 5′ exoribonucleases
-
Mitchell P, Petfalski E, Shevchenko A, Mann M, Tollervey D (1997) The exosome: a conserved eukaryotic RNA processing complex containing multiple 3′ → 5′ exoribonucleases. Cell 91: 457-466
-
(1997)
Cell
, vol.91
, pp. 457-466
-
-
Mitchell, P.1
Petfalski, E.2
Shevchenko, A.3
Mann, M.4
Tollervey, D.5
-
27
-
-
0028961870
-
Turnover mechanisms of the stable yeast PGK1 mRNA
-
Muhlrad D, Decker CJ, Parker R (1995) Turnover mechanisms of the stable yeast PGK1 mRNA. Mol Cell Biol 15: 2145-2156
-
(1995)
Mol Cell Biol
, vol.15
, pp. 2145-2156
-
-
Muhlrad, D.1
Decker, C.J.2
Parker, R.3
-
28
-
-
0037080834
-
The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements
-
Mukherjee D, Gao M, O'Connor JP, Raijmakers R, Pruijn G, Lutz CS, Wilusz J (2002) The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements. EMBO J 21: 165-174
-
(2002)
EMBO J
, vol.21
, pp. 165-174
-
-
Mukherjee, D.1
Gao, M.2
O'Connor, J.P.3
Raijmakers, R.4
Pruijn, G.5
Lutz, C.S.6
Wilusz, J.7
-
29
-
-
0025038919
-
The Xenopus laevis poly(A) binding protein is composed of multiple functionally independent RNA binding domains
-
Nietfeld W, Mentzel H, Pieler T (1990) The Xenopus laevis poly(A) binding protein is composed of multiple functionally independent RNA binding domains. EMBO J 9: 3699-3705
-
(1990)
EMBO J
, vol.9
, pp. 3699-3705
-
-
Nietfeld, W.1
Mentzel, H.2
Pieler, T.3
-
30
-
-
0041832085
-
Functional characterization of the mammalian mRNA decapping enzyme hDcp2
-
Piccirillo C, Khanna R, Kiledjian M (2003) Functional characterization of the mammalian mRNA decapping enzyme hDcp2. RNA 9: 1138-1147
-
(2003)
RNA
, vol.9
, pp. 1138-1147
-
-
Piccirillo, C.1
Khanna, R.2
Kiledjian, M.3
-
31
-
-
0037053430
-
Modulation of eukaryotic mRNA stability via the cap-blinding translation complex eIF4F
-
Ramirez CV, Vilela C, Berthelot K, McCarthy JE (2002) Modulation of eukaryotic mRNA stability via the cap-blinding translation complex eIF4F. J Mol Biol 318: 951-962
-
(2002)
J Mol Biol
, vol.318
, pp. 951-962
-
-
Ramirez, C.V.1
Vilela, C.2
Berthelot, K.3
McCarthy, J.E.4
-
32
-
-
0036909185
-
Regulated alpha-globin mRNA decay is a cytoplasmic event proceeding through 3′-to-5′ exosome-dependent decapping
-
Rodgers ND, Wang Z, Kiledjian M (2002) Regulated alpha-globin mRNA decay is a cytoplasmic event proceeding through 3′-to-5′ exosome-dependent decapping. RNA 8: 1526-1537
-
(2002)
RNA
, vol.8
, pp. 1526-1537
-
-
Rodgers, N.D.1
Wang, Z.2
Kiledjian, M.3
-
33
-
-
0023053281
-
H4 histone messenger RNA decay in cell-free extracts initiates at or near the 3′ terminus and proceeds 3′ to 5′
-
Ross J, Kobs G (1986) H4 histone messenger RNA decay in cell-free extracts initiates at or near the 3′ terminus and proceeds 3′ to 5′. J Mol Biol 188: 579-593
-
(1986)
J Mol Biol
, vol.188
, pp. 579-593
-
-
Ross, J.1
Kobs, G.2
-
34
-
-
0032778953
-
Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae
-
Schwartz DC, Parker R (1999) Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae. Mol Cell Biol 19: 5247-5256
-
(1999)
Mol Cell Biol
, vol.19
, pp. 5247-5256
-
-
Schwartz, D.C.1
Parker, R.2
-
35
-
-
0033773044
-
mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E
-
Schwartz DC, Parker R (2000) mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E. Mol Cell Biol 20: 7933-7942
-
(2000)
Mol Cell Biol
, vol.20
, pp. 7933-7942
-
-
Schwartz, D.C.1
Parker, R.2
-
36
-
-
0037968357
-
Decapping and decay of messenger RNA occur in cytoplasmic processing bodies
-
Sheth U, Parker R (2003) Decapping and decay of messenger RNA occur in cytoplasmic processing bodies. Science 300: 805-808
-
(2003)
Science
, vol.300
, pp. 805-808
-
-
Sheth, U.1
Parker, R.2
-
37
-
-
0037320851
-
Analysis of recombinant yeast decapping enzyme
-
Steiger M, Carr-Schmid A, Schwartz DC, Kiledjian M, Parker R (2003) Analysis of recombinant yeast decapping enzyme. RNA 9: 231-238
-
(2003)
RNA
, vol.9
, pp. 231-238
-
-
Steiger, M.1
Carr-Schmid, A.2
Schwartz, D.C.3
Kiledjian, M.4
Parker, R.5
-
38
-
-
0037121926
-
Human Dcp2: A catalytically active mRNA decapping enzyme located in specific cytoplasmic structures
-
Van Dijk E, Cougot N, Meyer S, Babajko S, Wahle E, Seraphin B (2002) Human Dcp2: a catalytically active mRNA decapping enzyme located in specific cytoplasmic structures. EMBO J 21: 6915-6924
-
(2002)
EMBO J
, vol.21
, pp. 6915-6924
-
-
Van Dijk, E.1
Cougot, N.2
Meyer, S.3
Babajko, S.4
Wahle, E.5
Seraphin, B.6
-
39
-
-
0142027794
-
DcpS can act in the 5′-3′ mRNA decay pathway in addition to the 3′-5′ pathway
-
van Dijk E, Le Hir H, Seraphin B (2003) DcpS can act in the 5′-3′ mRNA decay pathway in addition to the 3′-5′ pathway. Proc Natl Acad Sci USA 100: 12081-12086
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 12081-12086
-
-
Van Dijk, E.1
Le Hir, H.2
Seraphin, B.3
-
40
-
-
0033066673
-
An mRNA stability complex functions with poly(A)-binding protein to stabilize mRNA in vitro
-
Wang Z, Day N, Trifillis P, Kiledjian M (1999) An mRNA stability complex functions with poly(A)-binding protein to stabilize mRNA in vitro. Mol Cell Biol 19: 4552-4560
-
(1999)
Mol Cell Biol
, vol.19
, pp. 4552-4560
-
-
Wang, Z.1
Day, N.2
Trifillis, P.3
Kiledjian, M.4
-
42
-
-
0035861864
-
Functional link between the mammalian exosome and mRNA decapping
-
Wang Z, Kiledjian M (2001) Functional link between the mammalian exosome and mRNA decapping. Cell 107: 751-762
-
(2001)
Cell
, vol.107
, pp. 751-762
-
-
Wang, Z.1
Kiledjian, M.2
-
43
-
-
0032112017
-
Circularization of mRNA by eukaryotic translation initiation factors
-
Wells SE, Hillner PE, Vale RD, Sachs AB (1998) Circularization of mRNA by eukaryotic translation initiation factors. Mol Cell 2: 135-140
-
(1998)
Mol Cell
, vol.2
, pp. 135-140
-
-
Wells, S.E.1
Hillner, P.E.2
Vale, R.D.3
Sachs, A.B.4
-
44
-
-
0032823604
-
Identification and characterization of proteins binding A + U-rich elements
-
Wilson GM, Brewer G (1999) Identification and characterization of proteins binding A + U-rich elements. Methods 17: 74-83
-
(1999)
Methods
, vol.17
, pp. 74-83
-
-
Wilson, G.M.1
Brewer, G.2
-
45
-
-
0034761729
-
Poly(A)-binding proteins regulate both mRNA deadenylation and decapping in yeast cytoplasmic extracts
-
Wilusz CJ, Gao M, Jones CL, Wilusz J, Peltz SW (2001a) Poly(A)-binding proteins regulate both mRNA deadenylation and decapping in yeast cytoplasmic extracts. RNA 7: 1416-1424
-
(2001)
RNA
, vol.7
, pp. 1416-1424
-
-
Wilusz, C.J.1
Gao, M.2
Jones, C.L.3
Wilusz, J.4
Peltz, S.W.5
|