-
1
-
-
0027173542
-
Site-specific genetic recombination: Hops, flips, and flops
-
Sadowski P.D. Site-specific genetic recombination: Hops, flips, and flops. FASEB J. 7 (1993) 760-767
-
(1993)
FASEB J.
, vol.7
, pp. 760-767
-
-
Sadowski, P.D.1
-
2
-
-
0024236673
-
The mechanism of conservative site-specific recombination
-
Craig N.L. The mechanism of conservative site-specific recombination. Ann. Rev. Genet. 22 (1988) 77-105
-
(1988)
Ann. Rev. Genet.
, vol.22
, pp. 77-105
-
-
Craig, N.L.1
-
3
-
-
84959678845
-
A mechanism of gene conversion in fungi
-
Holliday R. A mechanism of gene conversion in fungi. Genet. Res. 5 (1964) 282-304
-
(1964)
Genet. Res.
, vol.5
, pp. 282-304
-
-
Holliday, R.1
-
4
-
-
0033594916
-
Asymmetric DNA bending in the Cre-loxP site-specific recombination synapse
-
Guo F., Gopaul D.N., and Van Duyne G.D. Asymmetric DNA bending in the Cre-loxP site-specific recombination synapse. Proc. Natl. Acad. Sci. USA 96 (1999) 7143-7148
-
(1999)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 7143-7148
-
-
Guo, F.1
Gopaul, D.N.2
Van Duyne, G.D.3
-
5
-
-
77049344680
-
Induction of the production of bacteriophages in lysogenic bacteria
-
Lwoff A., Siminovitch L., and Kjeldgaard N. Induction of the production of bacteriophages in lysogenic bacteria. Ann. Inst. Pasteur (Paris) 79 (1950) 815-859
-
(1950)
Ann. Inst. Pasteur (Paris)
, vol.79
, pp. 815-859
-
-
Lwoff, A.1
Siminovitch, L.2
Kjeldgaard, N.3
-
6
-
-
33645855496
-
Induction of lysis of a lysogenic bacterium without production of bacteriophages
-
Lwoff A., and Siminovitch L. Induction of lysis of a lysogenic bacterium without production of bacteriophages. C. R. Hebd. Seances Acad. Sci. 233 (1951) 1397-1399
-
(1951)
C. R. Hebd. Seances Acad. Sci.
, vol.233
, pp. 1397-1399
-
-
Lwoff, A.1
Siminovitch, L.2
-
8
-
-
0037716585
-
Prophage insertion sites
-
Campbell A. Prophage insertion sites. Res. Microbiol. 154 (2003) 277-282
-
(2003)
Res. Microbiol.
, vol.154
, pp. 277-282
-
-
Campbell, A.1
-
9
-
-
0002666144
-
Sensitive mutants of bacteriophage lambda
-
Campbell A. Sensitive mutants of bacteriophage lambda. Virology 14 (1961) 22-32
-
(1961)
Virology
, vol.14
, pp. 22-32
-
-
Campbell, A.1
-
10
-
-
77957094820
-
Episomes
-
Caspari E.W. (Ed), Academic Press, New York, NY
-
Campbell A.M. Episomes. In: Caspari E.W. (Ed). "Advances in Genetics" (1962), Academic Press, New York, NY 101-145
-
(1962)
"Advances in Genetics"
, pp. 101-145
-
-
Campbell, A.M.1
-
11
-
-
0014413366
-
Integration-negative mutants of bacteriophage lambda
-
Gottesman M.E., and Yarmolinsky M.B. Integration-negative mutants of bacteriophage lambda. J. Mol. Biol. 31 (1968) 487-505
-
(1968)
J. Mol. Biol.
, vol.31
, pp. 487-505
-
-
Gottesman, M.E.1
Yarmolinsky, M.B.2
-
13
-
-
0014140274
-
Mutants of bacteriophage lambda unable to integrate into the host chromosome
-
Gingery R., and Echols H. Mutants of bacteriophage lambda unable to integrate into the host chromosome. Proc. Natl. Acad. Sci. USA 58 (1967) 1507-1514
-
(1967)
Proc. Natl. Acad. Sci. USA
, vol.58
, pp. 1507-1514
-
-
Gingery, R.1
Echols, H.2
-
14
-
-
0014395168
-
Integration, excision, and transducing particle genesis by bacteriophage lambda
-
Gingery R., and Echols H. Integration, excision, and transducing particle genesis by bacteriophage lambda. Cold Spring Harb. Symp. Quant. Biol. 33 (1968) 721-727
-
(1968)
Cold Spring Harb. Symp. Quant. Biol.
, vol.33
, pp. 721-727
-
-
Gingery, R.1
Echols, H.2
-
15
-
-
0014413864
-
Integrative recombination function of bacteriophage lambda: Evidence for a site-specific recombination enzyme
-
Echols H., Gingery R., and Moore L. Integrative recombination function of bacteriophage lambda: Evidence for a site-specific recombination enzyme. J. Mol. Biol. 34 (1968) 251-260
-
(1968)
J. Mol. Biol.
, vol.34
, pp. 251-260
-
-
Echols, H.1
Gingery, R.2
Moore, L.3
-
16
-
-
0016796021
-
Integrative recombination of bacteriophage lambda DNA in vitro
-
Nash H.A. Integrative recombination of bacteriophage lambda DNA in vitro. Proc. Natl. Acad. Sci. USA 72 (1975) 1072-1076
-
(1975)
Proc. Natl. Acad. Sci. USA
, vol.72
, pp. 1072-1076
-
-
Nash, H.A.1
-
17
-
-
0018640151
-
Some properties of site-specific and general recombination inferred from int-initiated exchanges by bacteriophage lambda
-
Echols H., and Green L. Some properties of site-specific and general recombination inferred from int-initiated exchanges by bacteriophage lambda. Genetics 93 (1979) 297-307
-
(1979)
Genetics
, vol.93
, pp. 297-307
-
-
Echols, H.1
Green, L.2
-
19
-
-
0015753548
-
Attachment site mutants of bacteriophage lambda
-
Shulman M., and Gottesman M. Attachment site mutants of bacteriophage lambda. J. Mol. Biol. 81 (1973) 461-482
-
(1973)
J. Mol. Biol.
, vol.81
, pp. 461-482
-
-
Shulman, M.1
Gottesman, M.2
-
20
-
-
0023179984
-
Homology-dependent interactions in phage lambda site-specific recombination
-
Kitts P.A., and Nash H.A. Homology-dependent interactions in phage lambda site-specific recombination. Nature 329 (1987) 346-348
-
(1987)
Nature
, vol.329
, pp. 346-348
-
-
Kitts, P.A.1
Nash, H.A.2
-
21
-
-
0023667024
-
Site-specific recombination intermediates trapped with suicide substrates
-
Nunes-Düby S., Matsumoto L., and Landy A. Site-specific recombination intermediates trapped with suicide substrates. Cell 50 (1987) 779-788
-
(1987)
Cell
, vol.50
, pp. 779-788
-
-
Nunes-Düby, S.1
Matsumoto, L.2
Landy, A.3
-
22
-
-
0023430457
-
Isolation and characterization of intermediates in site-specific recombination
-
Hoess R., Wierzbicki A., and Abremski K. Isolation and characterization of intermediates in site-specific recombination. Proc. Natl. Acad. Sci. USA 84 (1987) 6840-6844
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 6840-6844
-
-
Hoess, R.1
Wierzbicki, A.2
Abremski, K.3
-
23
-
-
0343250277
-
Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements
-
Shapiro J.A. Molecular model for the transposition and replication of bacteriophage Mu and other transposable elements. Proc. Natl. Acad. Sci. USA 76 (1979) 1933-1937
-
(1979)
Proc. Natl. Acad. Sci. USA
, vol.76
, pp. 1933-1937
-
-
Shapiro, J.A.1
-
24
-
-
0018711170
-
Dissection of the transposition process: A transposon-encoded site-specific recombination system
-
Arthur A., and Sherratt D. Dissection of the transposition process: A transposon-encoded site-specific recombination system. Mol. Gen. Genet. 175 (1979) 267-274
-
(1979)
Mol. Gen. Genet.
, vol.175
, pp. 267-274
-
-
Arthur, A.1
Sherratt, D.2
-
25
-
-
0020360149
-
Transposon-mediated site-specific recombination: Identification of three binding sites for resolvase at the res sites of gamma delta and Tn3
-
Grindley N.D., Lauth M.R., Wells R.G., Wityk R.J., Salvo J.J., and Reed R.R. Transposon-mediated site-specific recombination: Identification of three binding sites for resolvase at the res sites of gamma delta and Tn3. Cell 30 (1982) 19-27
-
(1982)
Cell
, vol.30
, pp. 19-27
-
-
Grindley, N.D.1
Lauth, M.R.2
Wells, R.G.3
Wityk, R.J.4
Salvo, J.J.5
Reed, R.R.6
-
26
-
-
0019507482
-
Transposon-mediated site-specific recombination in vitro: DNA cleavage and protein-DNA linkage at the recombination site
-
Reed R.R., and Grindley N.D. Transposon-mediated site-specific recombination in vitro: DNA cleavage and protein-DNA linkage at the recombination site. Cell 25 (1981) 721-728
-
(1981)
Cell
, vol.25
, pp. 721-728
-
-
Reed, R.R.1
Grindley, N.D.2
-
27
-
-
0018405598
-
Symposium on DNA Replication and Recombination. Summary
-
Stahl F.W. Symposium on DNA Replication and Recombination. Summary. Cold Spring Harb. Symp. Quant. Biol. 43 Pt 2 (1979) 1353-1356
-
(1979)
Cold Spring Harb. Symp. Quant. Biol.
, vol.43 PART 2
, pp. 1353-1356
-
-
Stahl, F.W.1
-
28
-
-
0030816550
-
The integrase family of tyrosine recombinases: Evolution of a conserved active site domain
-
Esposito D., and Scocca J.J. The integrase family of tyrosine recombinases: Evolution of a conserved active site domain. Nucleic Acids Res. 25 (1997) 3605-3614
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3605-3614
-
-
Esposito, D.1
Scocca, J.J.2
-
29
-
-
0022669622
-
The integrase family of site-specific recombinases: Regional similarities and global diversity
-
Argos P., Landy A., Abremski K., Egan J.B., Haggard-Ljungquist E., Hoess R.H., Kahn M.L., Kalionis B., Narayana S.V., Pierson III L.S., Stemberg N., and Leong J.M. The integrase family of site-specific recombinases: Regional similarities and global diversity. EMBO J. 5 (1986) 433-440
-
(1986)
EMBO J.
, vol.5
, pp. 433-440
-
-
Argos, P.1
Landy, A.2
Abremski, K.3
Egan, J.B.4
Haggard-Ljungquist, E.5
Hoess, R.H.6
Kahn, M.L.7
Kalionis, B.8
Narayana, S.V.9
Pierson III, L.S.10
Stemberg, N.11
Leong, J.M.12
-
30
-
-
0038659759
-
Similarities and differences among 105 members of the Int family of site-specific recombinases
-
Nunes-Düby S.E., Kwon H.J., Tirumalai R.S., Ellenberger T., and Landy A. Similarities and differences among 105 members of the Int family of site-specific recombinases. Nucleic Acids Res. 26 (1998) 391-406
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 391-406
-
-
Nunes-Düby, S.E.1
Kwon, H.J.2
Tirumalai, R.S.3
Ellenberger, T.4
Landy, A.5
-
31
-
-
0001931646
-
-
Craig N.L., Craigie R., Gellert M., and Lambowitz A.M. (Eds), ASM Press, Washington DC Mobile DNA II.
-
Azaro M., and Landy A. In: Craig N.L., Craigie R., Gellert M., and Lambowitz A.M. (Eds). "Lambda Integrase and the Lambda Int Family" (2002), ASM Press, Washington DC Mobile DNA II.
-
(2002)
"Lambda Integrase and the Lambda Int Family"
-
-
Azaro, M.1
Landy, A.2
-
32
-
-
0033634688
-
Catalytic mechanism of DNA topoisomerase IB
-
Krogh B.O., and Shuman S. Catalytic mechanism of DNA topoisomerase IB. Mol. Cell 5 (2000) 1035-1041
-
(2000)
Mol. Cell
, vol.5
, pp. 1035-1041
-
-
Krogh, B.O.1
Shuman, S.2
-
33
-
-
0025840332
-
Recombination mediated by vaccinia virus DNA topoisomerase I in Escherichia coli is sequence specific
-
Shuman S. Recombination mediated by vaccinia virus DNA topoisomerase I in Escherichia coli is sequence specific. Proc. Natl. Acad. Sci. USA 88 (1991) 10104-10108
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 10104-10108
-
-
Shuman, S.1
-
34
-
-
0030061445
-
Resolution of Holliday junctions by eukaryotic DNA topoisomerase I
-
Sekiguchi J., Seeman N.C., and Shuman S. Resolution of Holliday junctions by eukaryotic DNA topoisomerase I. Proc. Natl. Acad. Sci. USA 93 (1996) 785-789
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 785-789
-
-
Sekiguchi, J.1
Seeman, N.C.2
Shuman, S.3
-
35
-
-
0034733003
-
DNA strand transfer catalyzed by vaccinia topoisomerase: Peroxidolysis and hydroxylaminolysis of the covalent protein-DNA intermediate
-
Krogh B.O., and Shuman S. DNA strand transfer catalyzed by vaccinia topoisomerase: Peroxidolysis and hydroxylaminolysis of the covalent protein-DNA intermediate. Biochemistry 39 (2000) 6422-6432
-
(2000)
Biochemistry
, vol.39
, pp. 6422-6432
-
-
Krogh, B.O.1
Shuman, S.2
-
36
-
-
0036161673
-
ResT, a telomere resolvase encoded by the Lyme disease spirochete
-
Kobryn K., and Chaconas G. ResT, a telomere resolvase encoded by the Lyme disease spirochete. Mol. Cell 9 (2002) 195-201
-
(2002)
Mol. Cell
, vol.9
, pp. 195-201
-
-
Kobryn, K.1
Chaconas, G.2
-
37
-
-
0034788112
-
The circle is broken: Telomere resolution in linear replicons
-
Kobryn K., and Chaconas G. The circle is broken: Telomere resolution in linear replicons. Curr. Opin. Microbiol. 4 (2001) 558-564
-
(2001)
Curr. Opin. Microbiol.
, vol.4
, pp. 558-564
-
-
Kobryn, K.1
Chaconas, G.2
-
38
-
-
0035875922
-
Telomere resolution in the Lyme disease spirochete
-
Chaconas G., Stewart P.E., Tilly K., Bono J.L., and Rosa P. Telomere resolution in the Lyme disease spirochete. EMBO J. 20 (2001) 3229-3237
-
(2001)
EMBO J.
, vol.20
, pp. 3229-3237
-
-
Chaconas, G.1
Stewart, P.E.2
Tilly, K.3
Bono, J.L.4
Rosa, P.5
-
39
-
-
0032832751
-
The plasmid prophage N15: A linear DNA with covalently closed ends
-
Rybchin V.N., and Svarchevsky A.N. The plasmid prophage N15: A linear DNA with covalently closed ends. Mol. Microbiol. 33 (1999) 895-903
-
(1999)
Mol. Microbiol.
, vol.33
, pp. 895-903
-
-
Rybchin, V.N.1
Svarchevsky, A.N.2
-
40
-
-
0037432717
-
Mechanisms of replication and telomere resolution of the linear plasmid prophage N15
-
Ravin N.V. Mechanisms of replication and telomere resolution of the linear plasmid prophage N15. FEMS Microbiol. Lett. 221 (2003) 1-6
-
(2003)
FEMS Microbiol. Lett.
, vol.221
, pp. 1-6
-
-
Ravin, N.V.1
-
41
-
-
0035812626
-
The protelomerase of the phage-plasmid N15 is responsible for its maintenance in linear form
-
Ravin N.V., Strakhova T.S., and Kuprianov V.V. The protelomerase of the phage-plasmid N15 is responsible for its maintenance in linear form. J. Mol. Biol. 312 (2001) 899-906
-
(2001)
J. Mol. Biol.
, vol.312
, pp. 899-906
-
-
Ravin, N.V.1
Strakhova, T.S.2
Kuprianov, V.V.3
-
42
-
-
0034608949
-
The protelomerase of temperate Escherichia coli phage N15 has cleaving-joining activity
-
Deneke J., Ziegelin G., Lurz R., and Lanka E. The protelomerase of temperate Escherichia coli phage N15 has cleaving-joining activity. Proc. Natl. Acad. Sci. USA 97 (2000) 7721-7726
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 7721-7726
-
-
Deneke, J.1
Ziegelin, G.2
Lurz, R.3
Lanka, E.4
-
43
-
-
0037155871
-
Phage N15 telomere resolution. Target requirements for recognition and processing by the protelomerase
-
Deneke J., Ziegelin G., Lurz R., and Lanka E. Phage N15 telomere resolution. Target requirements for recognition and processing by the protelomerase. J. Biol. Chem. 277 (2002) 10410-10419
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 10410-10419
-
-
Deneke, J.1
Ziegelin, G.2
Lurz, R.3
Lanka, E.4
-
44
-
-
0001350205
-
Resolvase-mediated site-specific recombination
-
Grindley N.D.F. Resolvase-mediated site-specific recombination. Nucl. Acids Mol. Biol. 8 (1994) 236-267
-
(1994)
Nucl. Acids Mol. Biol.
, vol.8
, pp. 236-267
-
-
Grindley, N.D.F.1
-
45
-
-
0036229438
-
Diversity in the serine recombinases
-
Smith M.C., and Thorpe H.M. Diversity in the serine recombinases. Mol. Microbiol. 44 (2002) 299-307
-
(2002)
Mol. Microbiol.
, vol.44
, pp. 299-307
-
-
Smith, M.C.1
Thorpe, H.M.2
-
47
-
-
0024364817
-
Site-specific recombination by Tn3 resolvase: Topological changes in the forward and reverse reactions
-
Stark W.M., Sherratt D.J., and Boocock M.R. Site-specific recombination by Tn3 resolvase: Topological changes in the forward and reverse reactions. Cell 58 (1989) 779-790
-
(1989)
Cell
, vol.58
, pp. 779-790
-
-
Stark, W.M.1
Sherratt, D.J.2
Boocock, M.R.3
-
48
-
-
0026438799
-
DNA inversions in phages and bacteria
-
van de Putte P., and Goosen N. DNA inversions in phages and bacteria. Trends in Genetics 8 (1992) 457-462
-
(1992)
Trends in Genetics
, vol.8
, pp. 457-462
-
-
van de Putte, P.1
Goosen, N.2
-
49
-
-
0021064075
-
Site-specific recombinational circularization of bacteriophage P1 DNA
-
Hochman L., Segev N., Sternberg N., and Cohen G. Site-specific recombinational circularization of bacteriophage P1 DNA. Virology 131 (1983) 11-17
-
(1983)
Virology
, vol.131
, pp. 11-17
-
-
Hochman, L.1
Segev, N.2
Sternberg, N.3
Cohen, G.4
-
50
-
-
0019415506
-
Control of circularization of bacteriophage P1 DNA in Escherichia coli
-
Segev N., and Cohen G. Control of circularization of bacteriophage P1 DNA in Escherichia coli. Virology 114 (1981) 333-342
-
(1981)
Virology
, vol.114
, pp. 333-342
-
-
Segev, N.1
Cohen, G.2
-
51
-
-
0019447996
-
A novel role for site-specific recombination in maintenance of bacterial replicons
-
Austin S., Ziese M., and Sternberg N. A novel role for site-specific recombination in maintenance of bacterial replicons. Cell 25 (1981) 729-736
-
(1981)
Cell
, vol.25
, pp. 729-736
-
-
Austin, S.1
Ziese, M.2
Sternberg, N.3
-
52
-
-
0028843052
-
The Flp recombinase of the 2-micron plasmid of Saccharomyces cerevisiae
-
Sadowski P.D. The Flp recombinase of the 2-micron plasmid of Saccharomyces cerevisiae. Progr. Nucl. Acids Res. Mol. Biol. 51 (1995) 53-91
-
(1995)
Progr. Nucl. Acids Res. Mol. Biol.
, vol.51
, pp. 53-91
-
-
Sadowski, P.D.1
-
53
-
-
85158066964
-
Site-specific recombination by the Flp protein of Saccharomyces cerevisiae
-
Craig R.C.N.L., Gellert M., and Lambowitz A.M. (Eds), ASM Press, Washington, DC
-
Jayaram M., Tribble G., and Grainge I. Site-specific recombination by the Flp protein of Saccharomyces cerevisiae. In: Craig R.C.N.L., Gellert M., and Lambowitz A.M. (Eds). "Mobile DNA II" (2002), ASM Press, Washington, DC 192-218
-
(2002)
"Mobile DNA II"
, pp. 192-218
-
-
Jayaram, M.1
Tribble, G.2
Grainge, I.3
-
54
-
-
0022596135
-
Copy number amplification of the 2 micron circle plasmid of Saccharomyces cerevisiae
-
Futcher A.B. Copy number amplification of the 2 micron circle plasmid of Saccharomyces cerevisiae. J. Theor. Biol. 119 (1986) 197-204
-
(1986)
J. Theor. Biol.
, vol.119
, pp. 197-204
-
-
Futcher, A.B.1
-
55
-
-
0022497169
-
Site-specific recombination promotes plasmid amplification in yeast
-
Volkert F.C., and Broach J.R. Site-specific recombination promotes plasmid amplification in yeast. Cell 46 (1986) 541-550
-
(1986)
Cell
, vol.46
, pp. 541-550
-
-
Volkert, F.C.1
Broach, J.R.2
-
56
-
-
0023431265
-
Roles of the 2 micron gene products in stable maintenance of the 2 micron plasmid of Saccharomyces cerevisiae
-
Reynolds A.E., Murray A.W., and Szostak J.W. Roles of the 2 micron gene products in stable maintenance of the 2 micron plasmid of Saccharomyces cerevisiae. Mol. Cell. Biol. 7 (1987) 3566-3573
-
(1987)
Mol. Cell. Biol.
, vol.7
, pp. 3566-3573
-
-
Reynolds, A.E.1
Murray, A.W.2
Szostak, J.W.3
-
57
-
-
0041853574
-
Bacterial chromosome dynamics
-
Sherratt D.J. Bacterial chromosome dynamics. Science 301 (2003) 780-785
-
(2003)
Science
, vol.301
, pp. 780-785
-
-
Sherratt, D.J.1
-
59
-
-
0041375463
-
New insight into site-specific recombination from Flp recombinase-DNA structures
-
Chen Y., and Rice P.A. New insight into site-specific recombination from Flp recombinase-DNA structures. Annu. Rev. Biophys. Biomol. Struct. 32 (2003) 135-159
-
(2003)
Annu. Rev. Biophys. Biomol. Struct.
, vol.32
, pp. 135-159
-
-
Chen, Y.1
Rice, P.A.2
-
60
-
-
0034991483
-
A structural view of Cre-loxP site-specific recombination
-
Van Duyne G.D. A structural view of Cre-loxP site-specific recombination. Annu. Rev. Biophys. Biomol. Struct. 30 (2001) 87-104
-
(2001)
Annu. Rev. Biophys. Biomol. Struct.
, vol.30
, pp. 87-104
-
-
Van Duyne, G.D.1
-
61
-
-
85158019877
-
Lambda Integrase and the Lambda Int family
-
Craig N.L., Craigie R., Gellert M., and Lambowitz A.M. (Eds), ASM Press, Washington, DC
-
Azaro M.A., and Landy A. Lambda Integrase and the Lambda Int family. In: Craig N.L., Craigie R., Gellert M., and Lambowitz A.M. (Eds). "Mobile DNA II" (2002), ASM Press, Washington, DC 118-148
-
(2002)
"Mobile DNA II"
, pp. 118-148
-
-
Azaro, M.A.1
Landy, A.2
-
62
-
-
0037001977
-
Cre/lox: One more step in the taming of the genome
-
Sauer B. Cre/lox: One more step in the taming of the genome. Endocrine 19 (2002) 221-228
-
(2002)
Endocrine
, vol.19
, pp. 221-228
-
-
Sauer, B.1
-
63
-
-
0025360095
-
Targeted insertion of exogenous DNA into the eukaryotic genome by the Cre recombinase
-
Sauer B., and Henderson N. Targeted insertion of exogenous DNA into the eukaryotic genome by the Cre recombinase. New Biologist 2 (1990) 441-449
-
(1990)
New Biologist
, vol.2
, pp. 441-449
-
-
Sauer, B.1
Henderson, N.2
-
64
-
-
0029316784
-
Genome engineering: The new mouse genetics
-
Rossant J., and Nagy A. Genome engineering: The new mouse genetics. Nat. Med. 1 (1995) 592-594
-
(1995)
Nat. Med.
, vol.1
, pp. 592-594
-
-
Rossant, J.1
Nagy, A.2
-
65
-
-
0035228342
-
Creation and use of a Cre recombinase transgenic database
-
Nagy A., and Mar L. Creation and use of a Cre recombinase transgenic database. Methods Mol. Biol. 158 (2001) 95-106
-
(2001)
Methods Mol. Biol.
, vol.158
, pp. 95-106
-
-
Nagy, A.1
Mar, L.2
-
66
-
-
0002123338
-
The Cre-lox Recombination System
-
Eckstein F., and Lilley D.M.J. (Eds), Springer-Verlag, Berlin, Germany
-
Hoess R.H., and Abremski K. The Cre-lox Recombination System. In: Eckstein F., and Lilley D.M.J. (Eds). "Nucleic Acids and Molecular Biology" (1990), Springer-Verlag, Berlin, Germany 99-109
-
(1990)
"Nucleic Acids and Molecular Biology"
, pp. 99-109
-
-
Hoess, R.H.1
Abremski, K.2
-
67
-
-
0030886293
-
Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse
-
Guo F., Gopaul D.N., and van Duyne G.D. Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse. Nature 389 (1997) 40-46
-
(1997)
Nature
, vol.389
, pp. 40-46
-
-
Guo, F.1
Gopaul, D.N.2
van Duyne, G.D.3
-
68
-
-
0032528271
-
Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination
-
Gopaul D.N., Guo F., and Van Duyne G.D. Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination. EMBO J. 17 (1998) 4175-4187
-
(1998)
EMBO J.
, vol.17
, pp. 4175-4187
-
-
Gopaul, D.N.1
Guo, F.2
Van Duyne, G.D.3
-
69
-
-
0036304839
-
The order of strand exchanges in Cre-LoxP recombination and its basis suggested by the crystal structure of a Cre-LoxP Holliday junction complex
-
Martin S.S., Pulido E., Chu V.C., Lechner T.S., and Baldwin E.P. The order of strand exchanges in Cre-LoxP recombination and its basis suggested by the crystal structure of a Cre-LoxP Holliday junction complex. J. Mol. Biol. 319 (2002) 107-127
-
(2002)
J. Mol. Biol.
, vol.319
, pp. 107-127
-
-
Martin, S.S.1
Pulido, E.2
Chu, V.C.3
Lechner, T.S.4
Baldwin, E.P.5
-
70
-
-
0344012172
-
Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
-
Ennifar E., Meyer J.E., Buchholz F., Stewart A.F., and Suck D. Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation. Nucleic Acids Res. 31 (2003) 5449-5460
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 5449-5460
-
-
Ennifar, E.1
Meyer, J.E.2
Buchholz, F.3
Stewart, A.F.4
Suck, D.5
-
71
-
-
0035850784
-
Quasi-equivalence in site-specific recombinase structure and function: Crystal structure and activity of trimeric Cre recombinase bound to a three-way Lox DNA junction
-
Woods K.C., Martin S.S., Chu V.C., and Baldwin E.P. Quasi-equivalence in site-specific recombinase structure and function: Crystal structure and activity of trimeric Cre recombinase bound to a three-way Lox DNA junction. J. Mol. Biol. 313 (2001) 49-69
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 49-69
-
-
Woods, K.C.1
Martin, S.S.2
Chu, V.C.3
Baldwin, E.P.4
-
72
-
-
1842394365
-
P1 site-specific recombination: Nucleotide sequence of the recombining sites
-
Hoess R.H., Ziese M., and Sternberg N. P1 site-specific recombination: Nucleotide sequence of the recombining sites. Proc. Natl. Acad. Sci. USA 79 (1982) 3398-3402
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, pp. 3398-3402
-
-
Hoess, R.H.1
Ziese, M.2
Sternberg, N.3
-
73
-
-
0022419150
-
Mechanism of strand cleavage and exchange in the Cre-lox site-specific recombination system
-
Hoess R.H., and Abremski K. Mechanism of strand cleavage and exchange in the Cre-lox site-specific recombination system. J. Mol. Biol. 181 (1985) 351-362
-
(1985)
J. Mol. Biol.
, vol.181
, pp. 351-362
-
-
Hoess, R.H.1
Abremski, K.2
-
74
-
-
0021697873
-
The nature of the interaction of the P1 recombinase Cre with the recombining site loxP
-
Hoess R., Abremski K., and Sternberg N. The nature of the interaction of the P1 recombinase Cre with the recombining site loxP. Cold Spring Harbor Sympos. Quant. Biol. 49 (1984) 761-768
-
(1984)
Cold Spring Harbor Sympos. Quant. Biol.
, vol.49
, pp. 761-768
-
-
Hoess, R.1
Abremski, K.2
Sternberg, N.3
-
75
-
-
0025600971
-
DNA specificity of the Cre recombinase resides in the 25 kDa carboxyl domain of the protein
-
Hoess R., Abremski K., Irwin S., Kendall M., and Mack A. DNA specificity of the Cre recombinase resides in the 25 kDa carboxyl domain of the protein. J. Mol. Biol. 216 (1990) 873-882
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 873-882
-
-
Hoess, R.1
Abremski, K.2
Irwin, S.3
Kendall, M.4
Mack, A.5
-
77
-
-
0032541483
-
Role of nucleotide sequences of loxP spacer region in Cre-mediated recombination
-
Lee G., and Saito I. Role of nucleotide sequences of loxP spacer region in Cre-mediated recombination. Gene 216 (1998) 55-65
-
(1998)
Gene
, vol.216
, pp. 55-65
-
-
Lee, G.1
Saito, I.2
-
78
-
-
0023046599
-
The role of the loxP spacer region in P1 site-specific recombination
-
Hoess R.H., Wierzbicki A., and Abremski K. The role of the loxP spacer region in P1 site-specific recombination. Nucl. Acids Res. 14 (1986) 2287-2300
-
(1986)
Nucl. Acids Res.
, vol.14
, pp. 2287-2300
-
-
Hoess, R.H.1
Wierzbicki, A.2
Abremski, K.3
-
79
-
-
0026731049
-
Stoichiometry of the Cre recombinase bound to the lox recombining site
-
Mack A., Sauer B., Abremski K., and Hoess R. Stoichiometry of the Cre recombinase bound to the lox recombining site. Nucl. Acids Res. 20 (1992) 4451-4455
-
(1992)
Nucl. Acids Res.
, vol.20
, pp. 4451-4455
-
-
Mack, A.1
Sauer, B.2
Abremski, K.3
Hoess, R.4
-
80
-
-
0032573418
-
Comparative kinetic analysis of FLP and cre recombinases: Mathematical models for DNA binding and recombination
-
Ringrose L., Lounnas V., Ehrlich L., Buchholz F., Wade R., and Stewart A.F. Comparative kinetic analysis of FLP and cre recombinases: Mathematical models for DNA binding and recombination. J. Mol. Biol. 284 (1998) 363-384
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 363-384
-
-
Ringrose, L.1
Lounnas, V.2
Ehrlich, L.3
Buchholz, F.4
Wade, R.5
Stewart, A.F.6
-
82
-
-
0141480265
-
Identification of Cre residues involved in synapsis, isomerization, and catalysis
-
Lee L., and Sadowski P.D. Identification of Cre residues involved in synapsis, isomerization, and catalysis. J. Biol. Chem. 278 3 (2003) 36905-36915
-
(2003)
J. Biol. Chem.
, vol.278
, Issue.3
, pp. 36905-36915
-
-
Lee, L.1
Sadowski, P.D.2
-
84
-
-
0023660545
-
A mutational analysis of the bacteriophage P1 recombinase Cre
-
Wierzbicki A., Kendall M., Abremski K., and Hoess R. A mutational analysis of the bacteriophage P1 recombinase Cre. J. Mol. Biol. 195 (1987) 785-794
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 785-794
-
-
Wierzbicki, A.1
Kendall, M.2
Abremski, K.3
Hoess, R.4
-
85
-
-
0001706341
-
Synapsis in the Cre-lox Site Specific Recombination System
-
Sarma R.H., and Sarma M.H. (Eds), Adenine Press, Guilderland, NY
-
Hoess R.H., Wierzbicki A., and Abremski K. Synapsis in the Cre-lox Site Specific Recombination System. In: Sarma R.H., and Sarma M.H. (Eds). "Structure & Methods, Vol. 1: Human Genome Initiative & DNA Recombination" (1990), Adenine Press, Guilderland, NY 203-213
-
(1990)
"Structure & Methods, Vol. 1: Human Genome Initiative & DNA Recombination"
, pp. 203-213
-
-
Hoess, R.H.1
Wierzbicki, A.2
Abremski, K.3
-
86
-
-
0034730731
-
Trans complementation of variant cre proteins for defects in cleavage and synapsis
-
Shaikh A.C., and Sadowski P.D. Trans complementation of variant cre proteins for defects in cleavage and synapsis. J. Biol. Chem. 275 (2000) 30186-30195
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 30186-30195
-
-
Shaikh, A.C.1
Sadowski, P.D.2
-
87
-
-
0032549763
-
Conservation of structure and mechanism between eukaryotic topoisomerase I and site-specific recombinases
-
Cheng C., Kussie P., Pavletich N., and Shuman S. Conservation of structure and mechanism between eukaryotic topoisomerase I and site-specific recombinases. Cell 92 (1998) 841-850
-
(1998)
Cell
, vol.92
, pp. 841-850
-
-
Cheng, C.1
Kussie, P.2
Pavletich, N.3
Shuman, S.4
-
88
-
-
0030759204
-
Mechanism of DNA transesterification by vaccinia topoisomerase: Catalytic contributions of essential residues Arg-130, Gly-132, Tyr-136, and Lys-167
-
Wittschieben J., and Shuman S. Mechanism of DNA transesterification by vaccinia topoisomerase: Catalytic contributions of essential residues Arg-130, Gly-132, Tyr-136, and Lys-167. Nucleic Acids Res. 25 (1997) 3001-3008
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3001-3008
-
-
Wittschieben, J.1
Shuman, S.2
-
89
-
-
0038677710
-
Cre induces an asymmetric DNA bend in its target loxP site
-
Lee L., Chu L.C., and Sadowski P.D. Cre induces an asymmetric DNA bend in its target loxP site. J. Biol. Chem. 278 (2003) 23118-23129
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 23118-23129
-
-
Lee, L.1
Chu, L.C.2
Sadowski, P.D.3
-
90
-
-
0021112721
-
Role for DNA homology in site-specific recombination. The isolation and characterization of a site affinity mutant of coliphage lambda
-
Weisberg R.A., Enquist L.W., Foeller C., and Landy A. Role for DNA homology in site-specific recombination. The isolation and characterization of a site affinity mutant of coliphage lambda. J. Mol. Biol. 170 (1983) 319-342
-
(1983)
J. Mol. Biol.
, vol.170
, pp. 319-342
-
-
Weisberg, R.A.1
Enquist, L.W.2
Foeller, C.3
Landy, A.4
-
91
-
-
0025894959
-
Behavior of a cross-linked attachment site: Testing the role of branch migration in site-specific recombination
-
Cowart M., Benkovic S.J., and Nash H.A. Behavior of a cross-linked attachment site: Testing the role of branch migration in site-specific recombination. J. Mol. Biol. 220 (1991) 621-629
-
(1991)
J. Mol. Biol.
, vol.220
, pp. 621-629
-
-
Cowart, M.1
Benkovic, S.J.2
Nash, H.A.3
-
92
-
-
0028999728
-
Effects of Holliday junction position on Xer-mediated recombination in vitro
-
Arciszewska L., Grainge I., and Sherratt D. Effects of Holliday junction position on Xer-mediated recombination in vitro. EMBO J. 14 (1995) 2651-2660
-
(1995)
EMBO J.
, vol.14
, pp. 2651-2660
-
-
Arciszewska, L.1
Grainge, I.2
Sherratt, D.3
-
93
-
-
0028096839
-
Resolution of immobile chi structures by the FLP recombinase of 2 micron plasmid
-
Dixon J.E., and Sadowski P.D. Resolution of immobile chi structures by the FLP recombinase of 2 micron plasmid. J. Mol. Biol. 243 (1994) 199-207
-
(1994)
J. Mol. Biol.
, vol.243
, pp. 199-207
-
-
Dixon, J.E.1
Sadowski, P.D.2
-
94
-
-
0029052633
-
Junction mobility and resolution of Holliday structures by Flp site-specific recombinase. Testing partner compatibility during recombination
-
Lee J., Lee J., and Jayaram M. Junction mobility and resolution of Holliday structures by Flp site-specific recombinase. Testing partner compatibility during recombination. J. Biol. Chem. 270 (1995) 19086-19092
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 19086-19092
-
-
Lee, J.1
Lee, J.2
Jayaram, M.3
-
95
-
-
0029240229
-
Swapping DNA strands and sensing homology without branch migration in lambda site-specific recombination
-
Nunes-Düby S.E., Azaro M.A., and Landy A. Swapping DNA strands and sensing homology without branch migration in lambda site-specific recombination. Curr. Biol. 5 (1995) 139-148
-
(1995)
Curr. Biol.
, vol.5
, pp. 139-148
-
-
Nunes-Düby, S.E.1
Azaro, M.A.2
Landy, A.3
-
97
-
-
0024280885
-
The structure of the Holliday junction and its resolution
-
Duckett D.R., Murchie A.I., Diekmann S., von Kitzing E., Kemper B., and Lilley D.M. The structure of the Holliday junction and its resolution. Cell 55 (1988) 79-89
-
(1988)
Cell
, vol.55
, pp. 79-89
-
-
Duckett, D.R.1
Murchie, A.I.2
Diekmann, S.3
von Kitzing, E.4
Kemper, B.5
Lilley, D.M.6
-
100
-
-
0002686249
-
The lox-Cre site-specific recombination system of bacteriophage P1
-
McMacken R., and Kelly T. (Eds), Alan R. Liss, Inc., New York
-
Hoess R., Abremski K., Frommer B., Wierzbicki A., and Kendall M. The lox-Cre site-specific recombination system of bacteriophage P1. In: McMacken R., and Kelly T. (Eds). "DNA Replication and Recombination" (1987), Alan R. Liss, Inc., New York 745-756
-
(1987)
"DNA Replication and Recombination"
, pp. 745-756
-
-
Hoess, R.1
Abremski, K.2
Frommer, B.3
Wierzbicki, A.4
Kendall, M.5
-
101
-
-
0037436327
-
Sequence of the loxP site determines the order of strand exchange by the Cre recombinase
-
Lee L., and Sadowski P.D. Sequence of the loxP site determines the order of strand exchange by the Cre recombinase. J. Mol. Biol. 326 (2003) 397-412
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 397-412
-
-
Lee, L.1
Sadowski, P.D.2
-
102
-
-
0035903186
-
Directional resolution of synthetic Holliday structures by the Cre recombinase
-
Lee L., and Sadowski P.D. Directional resolution of synthetic Holliday structures by the Cre recombinase. J. Biol. Chem. 276 (2001) 31092-31098
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 31092-31098
-
-
Lee, L.1
Sadowski, P.D.2
-
103
-
-
0034698020
-
DNA recognition, strand selectivity, and cleavage mode during integrase family site-specific recombination
-
Tribble G., Ahn Y.T., Lee J., Dandekar T., and Jayaram M. DNA recognition, strand selectivity, and cleavage mode during integrase family site-specific recombination. J. Biol. Chem. 275 (2000) 22255-22267
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 22255-22267
-
-
Tribble, G.1
Ahn, Y.T.2
Lee, J.3
Dandekar, T.4
Jayaram, M.5
-
104
-
-
0037646918
-
Modulation of the active complex assembly and turnover rate by protein-DNA interactions in Cre-LoxP recombination
-
Martin S.S., Chu V.C., and Baldwin E. Modulation of the active complex assembly and turnover rate by protein-DNA interactions in Cre-LoxP recombination. Biochemistry 42 (2003) 6814-6826
-
(2003)
Biochemistry
, vol.42
, pp. 6814-6826
-
-
Martin, S.S.1
Chu, V.C.2
Baldwin, E.3
-
105
-
-
0032821668
-
Structure and mechanism in site-specific recombination
-
Gopaul D.N., and Van Duyne G.D. Structure and mechanism in site-specific recombination. Curr. Opin. Struct. Biol. 9 (1999) 14-20
-
(1999)
Curr. Opin. Struct. Biol.
, vol.9
, pp. 14-20
-
-
Gopaul, D.N.1
Van Duyne, G.D.2
-
106
-
-
0022803360
-
Identification of the crossover site during FLP-mediated recombination in the Saccharomyces cerevisiae plasmid 2 micron circle
-
McLeod M., Craft S., and Broach J.R. Identification of the crossover site during FLP-mediated recombination in the Saccharomyces cerevisiae plasmid 2 micron circle. Mol. Cell. Biol. 6 (1986) 3357-3367
-
(1986)
Mol. Cell. Biol.
, vol.6
, pp. 3357-3367
-
-
McLeod, M.1
Craft, S.2
Broach, J.R.3
-
107
-
-
0022751237
-
Interaction of the FLP recombinase of the Saccharomyces cerevisiae 2 micron plasmid with mutated target sequences
-
Andrews B.J., McLeod M., Broach J., and Sadowski P.D. Interaction of the FLP recombinase of the Saccharomyces cerevisiae 2 micron plasmid with mutated target sequences. Mol. Cell. Biol. 6 (1986) 2482-2489
-
(1986)
Mol. Cell. Biol.
, vol.6
, pp. 2482-2489
-
-
Andrews, B.J.1
McLeod, M.2
Broach, J.3
Sadowski, P.D.4
-
108
-
-
0023056749
-
The minimal duplex DNA sequence required for site-specific recombination promoted by the FLP protein of yeast in vitro
-
Proteau G., Sidenberg D., and Sadowski P. The minimal duplex DNA sequence required for site-specific recombination promoted by the FLP protein of yeast in vitro. Nucl. Acids. Res. 14 (1986) 4787-4802
-
(1986)
Nucl. Acids. Res.
, vol.14
, pp. 4787-4802
-
-
Proteau, G.1
Sidenberg, D.2
Sadowski, P.3
-
109
-
-
0022388399
-
Determination of DNA sequences essential for FLP-mediated recombination by a novel method
-
Gronostajski R.M., and Sadowski P.D. Determination of DNA sequences essential for FLP-mediated recombination by a novel method. J. Biol. Chem. 260 (1985) 12320-12327
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 12320-12327
-
-
Gronostajski, R.M.1
Sadowski, P.D.2
-
110
-
-
0022399815
-
Two-micrometer circle site-specific recombination: The minimal substrate and the possible role of flanking sequences
-
Jayaram M. Two-micrometer circle site-specific recombination: The minimal substrate and the possible role of flanking sequences. Proc. Natl. Acad. Sci. USA 82 (1985) 5875-5879
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 5875-5879
-
-
Jayaram, M.1
-
111
-
-
0024027282
-
The functional significance of DNA sequence structure in a site-specific genetic recombination reaction
-
Umlauf S.W., and Cox M.M. The functional significance of DNA sequence structure in a site-specific genetic recombination reaction. EMBO J. 7 (1988) 1845-1852
-
(1988)
EMBO J.
, vol.7
, pp. 1845-1852
-
-
Umlauf, S.W.1
Cox, M.M.2
-
112
-
-
0031849462
-
DNA sequence determinant for FIp-induced DNA bending
-
Luetke K.H., and Sadowski P.D. DNA sequence determinant for FIp-induced DNA bending. Mol. Microbiol. 29 (1998) 199-208
-
(1998)
Mol. Microbiol.
, vol.29
, pp. 199-208
-
-
Luetke, K.H.1
Sadowski, P.D.2
-
113
-
-
0025848032
-
Identification of the DNA-binding domain of the FLP recombinase
-
Pan H., Clary D., and Sadowski P.D. Identification of the DNA-binding domain of the FLP recombinase. J. Biol. Chem. 266 (1991) 11347-11354
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 11347-11354
-
-
Pan, H.1
Clary, D.2
Sadowski, P.D.3
-
114
-
-
0026496351
-
The FLP protein contacts both major and minor grooves of its recognition target sequence
-
Panigrahi G.B., Beatty L.G., and Sadowski P.D. The FLP protein contacts both major and minor grooves of its recognition target sequence. Nucl. Acids Res. 20 (1992) 5927-5935
-
(1992)
Nucl. Acids Res.
, vol.20
, pp. 5927-5935
-
-
Panigrahi, G.B.1
Beatty, L.G.2
Sadowski, P.D.3
-
115
-
-
0028177608
-
Interaction of the NH2- and COOH-terminal domains of the FLP recombinase with the FLP recognition target sequence
-
Panigrahi G.B., and Sadowski P.D. Interaction of the NH2- and COOH-terminal domains of the FLP recombinase with the FLP recognition target sequence. J. Biol. Chem. 269 (1994) 10940-10945
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 10940-10945
-
-
Panigrahi, G.B.1
Sadowski, P.D.2
-
116
-
-
0025823305
-
Domain of a yeast site-specific recombinase (Flp) that recognizes its target site
-
Chen J.W., Evans B.R., Yang S.H., Teplow D.B., and Jayaram M. Domain of a yeast site-specific recombinase (Flp) that recognizes its target site. Proc. Natl. Acad. Sci. USA 88 (1991) 5944-5948
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 5944-5948
-
-
Chen, J.W.1
Evans, B.R.2
Yang, S.H.3
Teplow, D.B.4
Jayaram, M.5
-
117
-
-
0033637213
-
Crystal structure of an Flp recombinase-Holliday junction complex. Assembly of an active oligomer by helix swapping
-
Chen Y., Narendra U., Iype L.E., Cox M.M., and Rice P.A. Crystal structure of an Flp recombinase-Holliday junction complex. Assembly of an active oligomer by helix swapping. Mol. Cell 6 (2000) 885-897
-
(2000)
Mol. Cell
, vol.6
, pp. 885-897
-
-
Chen, Y.1
Narendra, U.2
Iype, L.E.3
Cox, M.M.4
Rice, P.A.5
-
118
-
-
0024292652
-
DNA recognition by the FLP recombinase of the yeast 2 mu plasmid. A mutational analysis of the FLP binding site
-
Senecoff J.F., Rossmeissl P.J., and Cox M.M. DNA recognition by the FLP recombinase of the yeast 2 mu plasmid. A mutational analysis of the FLP binding site. J. Mol. Biol. 201 (1988) 405-421
-
(1988)
J. Mol. Biol.
, vol.201
, pp. 405-421
-
-
Senecoff, J.F.1
Rossmeissl, P.J.2
Cox, M.M.3
-
119
-
-
0036529559
-
A dual reporter screening system identifies the amino acid at position 82 in Flp site-specific recombinase as a determinant for target specificity
-
Voziyanov Y., Stewart A.F., and Jayaram M. A dual reporter screening system identifies the amino acid at position 82 in Flp site-specific recombinase as a determinant for target specificity. Nucleic Acids Res. 30 (2002) 1656-1663
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 1656-1663
-
-
Voziyanov, Y.1
Stewart, A.F.2
Jayaram, M.3
-
120
-
-
0037423742
-
Stepwise manipulation of DNA specificity in Flp recombinase: Progressively adapting Flp to individual and combinatorial mutations in its target site
-
Voziyanov Y., Konieczka J.H., Stewart A.F., and Jayaram M. Stepwise manipulation of DNA specificity in Flp recombinase: Progressively adapting Flp to individual and combinatorial mutations in its target site. J. Mol. Biol. 326 (2003) 65-76
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 65-76
-
-
Voziyanov, Y.1
Konieczka, J.H.2
Stewart, A.F.3
Jayaram, M.4
-
121
-
-
0024509548
-
FLP recombinase of the 2 micron circle plasmid of Saccharomyces cerevisiae bends its DNA target. Isolation of FLP mutants defective in DNA bending
-
Schwartz C.J., and Sadowski P.D. FLP recombinase of the 2 micron circle plasmid of Saccharomyces cerevisiae bends its DNA target. Isolation of FLP mutants defective in DNA bending. J. Mol. Biol. 205 (1989) 647-658
-
(1989)
J. Mol. Biol.
, vol.205
, pp. 647-658
-
-
Schwartz, C.J.1
Sadowski, P.D.2
-
122
-
-
0025642871
-
FLP protein of 2 mu circle plasmid of yeast induces multiple bends in the FLP recognition target site
-
Schwartz C.J., and Sadowski P.D. FLP protein of 2 mu circle plasmid of yeast induces multiple bends in the FLP recognition target site. J. Mol. Biol. 216 (1990) 289-298
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 289-298
-
-
Schwartz, C.J.1
Sadowski, P.D.2
-
123
-
-
0029127499
-
The role of DNA bending in Flp-mediated site-specific recombination
-
Luetke K.H., and Sadowski P.D. The role of DNA bending in Flp-mediated site-specific recombination. J. Mol. Biol. 251 (1995) 493-506
-
(1995)
J. Mol. Biol.
, vol.251
, pp. 493-506
-
-
Luetke, K.H.1
Sadowski, P.D.2
-
124
-
-
0042090348
-
The role of the conserved Trp330 in Flp-mediated recombination. Functional and structural analysis
-
Chen Y., and Rice P.A. The role of the conserved Trp330 in Flp-mediated recombination. Functional and structural analysis. J. Biol. Chem. 278 (2003) 24800-24807
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 24800-24807
-
-
Chen, Y.1
Rice, P.A.2
-
125
-
-
0026651559
-
DNA cleavage in trans by the active site tyrosine during Flp recombination: Switching protein partners before exchanging strands
-
Chen J.W., Lee J., and Jayaram M. DNA cleavage in trans by the active site tyrosine during Flp recombination: Switching protein partners before exchanging strands. Cell 69 (1992) 647-658
-
(1992)
Cell
, vol.69
, pp. 647-658
-
-
Chen, J.W.1
Lee, J.2
Jayaram, M.3
-
126
-
-
0034622937
-
Chimeras of the Flp and Cre recombinases: Tests of the mode of cleavage by Flp and Cre
-
Shaikh A.C., and Sadowski P.D. Chimeras of the Flp and Cre recombinases: Tests of the mode of cleavage by Flp and Cre. J. Mol. Biol. 302 (2000) 27-48
-
(2000)
J. Mol. Biol.
, vol.302
, pp. 27-48
-
-
Shaikh, A.C.1
Sadowski, P.D.2
-
127
-
-
0028270913
-
Generality of the shared active site among yeast family site-specific recombinases. The R site-specific recombinase follows the Flp paradigm
-
[corrected] [published erratum appears in J. Biol. Chem., 1994, Jul 1 269(26), 17756].
-
Yang S.H., and Jayaram M. Generality of the shared active site among yeast family site-specific recombinases. The R site-specific recombinase follows the Flp paradigm. J. Biol. Chem. 269 (1994) 12789-12796 [corrected] [published erratum appears in J. Biol. Chem., 1994, Jul 1 269(26), 17756].
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 12789-12796
-
-
Yang, S.H.1
Jayaram, M.2
-
128
-
-
0027159168
-
Mechanism of cleavage and ligation by FLP recombinase: Classification of mutations in FLP protein by in vitro complementation analysis
-
Pan G., Luetke K., and Sadowski P.D. Mechanism of cleavage and ligation by FLP recombinase: Classification of mutations in FLP protein by in vitro complementation analysis. Mol. Cell. Biol. 13 (1993) 3167-3175
-
(1993)
Mol. Cell. Biol.
, vol.13
, pp. 3167-3175
-
-
Pan, G.1
Luetke, K.2
Sadowski, P.D.3
-
129
-
-
0037436326
-
Structural plasticity of the Flp-Holliday junction complex
-
Conway A.B., Chen Y., and Rice P.A. Structural plasticity of the Flp-Holliday junction complex. J. Mol. Biol. 326 (2003) 425-434
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 425-434
-
-
Conway, A.B.1
Chen, Y.2
Rice, P.A.3
-
130
-
-
0026029487
-
Tyr60 variants of Flp recombinase generate conformationally altered protein-DNA complexes. Differential activity in full-site and half-site recombinations
-
Chen J.W., Evans B.R., Zheng L., and Jayaram M. Tyr60 variants of Flp recombinase generate conformationally altered protein-DNA complexes. Differential activity in full-site and half-site recombinations. J. Mol. Biol. 218 (1991) 107-118
-
(1991)
J. Mol. Biol.
, vol.218
, pp. 107-118
-
-
Chen, J.W.1
Evans, B.R.2
Zheng, L.3
Jayaram, M.4
-
131
-
-
0027475232
-
Mutations of the FLP recombinase gene that cause a deficiency in DNA bending and strand cleavage
-
Kulpa J., Dixon J.E., Pan G., and Sadowski P.D. Mutations of the FLP recombinase gene that cause a deficiency in DNA bending and strand cleavage. J. Biol. Chem. 268 (1993) 1101-1108
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 1101-1108
-
-
Kulpa, J.1
Dixon, J.E.2
Pan, G.3
Sadowski, P.D.4
-
132
-
-
0028180387
-
Phosphoryl transfer in Flp recombination: A template for strand transfer mechanisms
-
Jayaram M. Phosphoryl transfer in Flp recombination: A template for strand transfer mechanisms. Trends Biochem. Sci. 19 (1994) 78-82
-
(1994)
Trends Biochem. Sci.
, vol.19
, pp. 78-82
-
-
Jayaram, M.1
-
133
-
-
0029396763
-
Return to sobriety after the catalytic party [letter; comment]
-
Jayaram M., and Lee J. Return to sobriety after the catalytic party [letter; comment]. Trends Genet. 11 (1995) 432-433
-
(1995)
Trends Genet.
, vol.11
, pp. 432-433
-
-
Jayaram, M.1
Lee, J.2
-
134
-
-
0030977710
-
The cis-trans paradox of integrase [see comments]
-
Jayaram M. The cis-trans paradox of integrase [see comments]. Science 276 (1997) 49-51
-
(1997)
Science
, vol.276
, pp. 49-51
-
-
Jayaram, M.1
-
135
-
-
0023700277
-
Holliday junctions in FLP recombination: Resolution by step-arrest mutants of FLP protein
-
Jayaram M., Crain K.L., Parsons R.L., and Harshey R.M. Holliday junctions in FLP recombination: Resolution by step-arrest mutants of FLP protein. Proc. Natl. Acad. Sci. USA 85 (1988) 7902-7906
-
(1988)
Proc. Natl. Acad. Sci. USA
, vol.85
, pp. 7902-7906
-
-
Jayaram, M.1
Crain, K.L.2
Parsons, R.L.3
Harshey, R.M.4
-
136
-
-
0023741168
-
Holliday intermediates and reaction by-products in FLP protein-promoted site-specific recombination
-
Meyer-Leon L., Huang L.C., Umlauf S.W., Cox M.M., and Inman R.B. Holliday intermediates and reaction by-products in FLP protein-promoted site-specific recombination. Mol. Cell. Biol. 8 (1988) 3784-3796
-
(1988)
Mol. Cell. Biol.
, vol.8
, pp. 3784-3796
-
-
Meyer-Leon, L.1
Huang, L.C.2
Umlauf, S.W.3
Cox, M.M.4
Inman, R.B.5
-
137
-
-
0025098475
-
Characterization of Holliday structures in FLP protein-promoted site-specific recombination
-
Meyer-Leon L., Inman R.B., and Cox M.M. Characterization of Holliday structures in FLP protein-promoted site-specific recombination. Mol. Cell. Biol. 10 (1990) 235-242
-
(1990)
Mol. Cell. Biol.
, vol.10
, pp. 235-242
-
-
Meyer-Leon, L.1
Inman, R.B.2
Cox, M.M.3
-
138
-
-
0025369604
-
Synaptic intermediates promoted by the FLP recombinase
-
Amin A.A., Beatty L.G., and Sadowski P.D. Synaptic intermediates promoted by the FLP recombinase. J. Mol. Biol. 214 (1990) 55-72
-
(1990)
J. Mol. Biol.
, vol.214
, pp. 55-72
-
-
Amin, A.A.1
Beatty, L.G.2
Sadowski, P.D.3
-
139
-
-
0027145151
-
Resolution of synthetic chi structures by the FLP site-specific recombinase
-
Dixon J.E., and Sadowski P.D. Resolution of synthetic chi structures by the FLP site-specific recombinase. J. Mol. Biol. 234 (1993) 522-533
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 522-533
-
-
Dixon, J.E.1
Sadowski, P.D.2
-
140
-
-
0030661988
-
Mechanism of active site exclusion in a site-specific recombinase: Role of the DNA substrate in conferring half-of-the-sites activity
-
Lee J., Tonozuka T., and Jayaram M. Mechanism of active site exclusion in a site-specific recombinase: Role of the DNA substrate in conferring half-of-the-sites activity. Genes Dev. 11 (1997) 3061-3071
-
(1997)
Genes Dev.
, vol.11
, pp. 3061-3071
-
-
Lee, J.1
Tonozuka, T.2
Jayaram, M.3
-
141
-
-
0034681282
-
Resolution of tethered antiparallel and parallel Holliday junctions by the Flp site-specific recombinase
-
Lee J., Tribble G., and Jayaram M. Resolution of tethered antiparallel and parallel Holliday junctions by the Flp site-specific recombinase. J. Mol. Biol. 296 (2000) 403-419
-
(2000)
J. Mol. Biol.
, vol.296
, pp. 403-419
-
-
Lee, J.1
Tribble, G.2
Jayaram, M.3
-
142
-
-
0028598536
-
Interactions of the site-specific recombinases XerC and XerD with the recombination site dif
-
Blakely G.W., and Sherratt D.J. Interactions of the site-specific recombinases XerC and XerD with the recombination site dif. Nucl. Acids Res. 22 (1994) 5613-5620
-
(1994)
Nucl. Acids Res.
, vol.22
, pp. 5613-5620
-
-
Blakely, G.W.1
Sherratt, D.J.2
-
143
-
-
0027422093
-
Two related recombinases are required for site-specific recombination at dif and cer in E. coli K12
-
Blakely G., May G., McCulloch R., Arciszewska L.K., Burke M., Lovett S.T., and Sherratt D.J. Two related recombinases are required for site-specific recombination at dif and cer in E. coli K12. Cell 75 (1993) 351-361
-
(1993)
Cell
, vol.75
, pp. 351-361
-
-
Blakely, G.1
May, G.2
McCulloch, R.3
Arciszewska, L.K.4
Burke, M.5
Lovett, S.T.6
Sherratt, D.J.7
-
144
-
-
0029986069
-
Determinants of selectivity in Xer site-specific recombination
-
Blakely G., and Sherratt D. Determinants of selectivity in Xer site-specific recombination. Genes & Development 10 (1996) 762-773
-
(1996)
Genes & Development
, vol.10
, pp. 762-773
-
-
Blakely, G.1
Sherratt, D.2
-
145
-
-
0030817595
-
Crystal structure of the site-specific recombinase, XerD
-
Subramanya H.S., Arciszewska L.K., Baker R.A., Bird L.E., Sherratt D.J., and Wigley D.B. Crystal structure of the site-specific recombinase, XerD. EMBO J. 16 (1997) 5178-5187
-
(1997)
EMBO J.
, vol.16
, pp. 5178-5187
-
-
Subramanya, H.S.1
Arciszewska, L.K.2
Baker, R.A.3
Bird, L.E.4
Sherratt, D.J.5
Wigley, D.B.6
-
146
-
-
0029030020
-
Xer site-specific recombination in vitro
-
Arciszewska L.K., and Sherratt D.J. Xer site-specific recombination in vitro. EMBO J. 14 (1995) 2112-2120
-
(1995)
EMBO J.
, vol.14
, pp. 2112-2120
-
-
Arciszewska, L.K.1
Sherratt, D.J.2
-
147
-
-
0031561801
-
Binding and cleavage of nicked substrates by site-specific recombinases XerC and XerD
-
Blakely G.W., Davidson A.O., and Sherratt D.J. Binding and cleavage of nicked substrates by site-specific recombinases XerC and XerD. J. Mol. Biol. 265 (1997) 30-39
-
(1997)
J. Mol. Biol.
, vol.265
, pp. 30-39
-
-
Blakely, G.W.1
Davidson, A.O.2
Sherratt, D.J.3
-
148
-
-
0342618313
-
Direct interaction of aminopeptidase A with recombination site DNA in Xer site-specific recombination
-
Alen C., Sherratt D.J., and Colloms S.D. Direct interaction of aminopeptidase A with recombination site DNA in Xer site-specific recombination. EMBO J. 16 (1997) 5188-5197
-
(1997)
EMBO J.
, vol.16
, pp. 5188-5197
-
-
Alen, C.1
Sherratt, D.J.2
Colloms, S.D.3
-
149
-
-
0031979599
-
The ArcA/ArcB two-component regulatory system of Escherichia coli is essential for Xer site-specific recombination at psi
-
Colloms S.D., Alen C., and Sherratt D.J. The ArcA/ArcB two-component regulatory system of Escherichia coli is essential for Xer site-specific recombination at psi. Mol. Microbiol. 28 (1998) 521-530
-
(1998)
Mol. Microbiol.
, vol.28
, pp. 521-530
-
-
Colloms, S.D.1
Alen, C.2
Sherratt, D.J.3
-
150
-
-
0029964042
-
Xer-mediated site-specific recombination in vitro
-
Colloms S.D., McCulloch R., Grant K., Neilson L., and Sherratt D.J. Xer-mediated site-specific recombination in vitro. EMBO J. 15 (1996) 1172-1181
-
(1996)
EMBO J.
, vol.15
, pp. 1172-1181
-
-
Colloms, S.D.1
McCulloch, R.2
Grant, K.3
Neilson, L.4
Sherratt, D.J.5
-
151
-
-
0037099579
-
Accessory factors determine the order of strand exchange in Xer recombination at psi
-
Bregu M., Sherratt D.J., and Colloms S.D. Accessory factors determine the order of strand exchange in Xer recombination at psi. EMBO J. 21 (2002) 3888-3897
-
(2002)
EMBO J.
, vol.21
, pp. 3888-3897
-
-
Bregu, M.1
Sherratt, D.J.2
Colloms, S.D.3
-
152
-
-
1942455734
-
Control of Cre recombination by regulatory elements from Xer recombination systems
-
Gourlay S.C., and Colloms S.D. Control of Cre recombination by regulatory elements from Xer recombination systems. Mol. Microbiol. 52 (2004) 53-65
-
(2004)
Mol. Microbiol.
, vol.52
, pp. 53-65
-
-
Gourlay, S.C.1
Colloms, S.D.2
-
153
-
-
0024293535
-
The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the ColE1 cer locus
-
Stirling C.J., Szatmari G., Stewart G., Smith M.C., and Sherratt D.J. The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the ColE1 cer locus. EMBO J. 7 (1988) 4389-4395
-
(1988)
EMBO J.
, vol.7
, pp. 4389-4395
-
-
Stirling, C.J.1
Szatmari, G.2
Stewart, G.3
Smith, M.C.4
Sherratt, D.J.5
-
154
-
-
0037169328
-
FtsK Is a DNA motor protein that activates chromosome dimer resolution by switching the catalytic state of the XerC and XerD recombinases
-
Aussel L., Barre F.X., Aroyo M., Stasiak A., Stasiak A.Z., and Sherratt D. FtsK Is a DNA motor protein that activates chromosome dimer resolution by switching the catalytic state of the XerC and XerD recombinases. Cell 108 (2002) 195-205
-
(2002)
Cell
, vol.108
, pp. 195-205
-
-
Aussel, L.1
Barre, F.X.2
Aroyo, M.3
Stasiak, A.4
Stasiak, A.Z.5
Sherratt, D.6
-
155
-
-
0033636814
-
FtsK functions in the processing of a Holliday junction intermediate during bacterial chromosome segregation
-
Barre F.X., et al. FtsK functions in the processing of a Holliday junction intermediate during bacterial chromosome segregation. Genes Dev. 14 (2000) 2976-2988
-
(2000)
Genes Dev.
, vol.14
, pp. 2976-2988
-
-
Barre, F.X.1
-
156
-
-
0030950350
-
The isomeric preference of Holliday junctions influences resolution bias by lambda integrase
-
Azaro M.A., and Landy A. The isomeric preference of Holliday junctions influences resolution bias by lambda integrase. EMBO J. 16 (1997) 3744-3755
-
(1997)
EMBO J.
, vol.16
, pp. 3744-3755
-
-
Azaro, M.A.1
Landy, A.2
-
157
-
-
0030927777
-
Action of site-specific recombinases XerC and XerD on tethered Holliday junctions
-
Arciszewska L.K., Grainge I., and Sherratt D.J. Action of site-specific recombinases XerC and XerD on tethered Holliday junctions. EMBO J. 16 (1997) 3731-3743
-
(1997)
EMBO J.
, vol.16
, pp. 3731-3743
-
-
Arciszewska, L.K.1
Grainge, I.2
Sherratt, D.J.3
-
158
-
-
0025266027
-
The stereochemistry of a four-way DNA junction: A theoretical study
-
von Kitzing E., Lilley D.M., and Diekmann S. The stereochemistry of a four-way DNA junction: A theoretical study. Nucl. Acids Res. 18 (1990) 2671-2683
-
(1990)
Nucl. Acids Res.
, vol.18
, pp. 2671-2683
-
-
von Kitzing, E.1
Lilley, D.M.2
Diekmann, S.3
-
159
-
-
0033382191
-
Reciprocal control of catalysis by the tyrosine recombinases XerC and XerD: An enzymatic switch in site-specific recombination
-
Hallet B., Arciszewska L.K., and Sherratt D.J. Reciprocal control of catalysis by the tyrosine recombinases XerC and XerD: An enzymatic switch in site-specific recombination. Mol. Cell 4 (1999) 949-959
-
(1999)
Mol. Cell
, vol.4
, pp. 949-959
-
-
Hallet, B.1
Arciszewska, L.K.2
Sherratt, D.J.3
-
160
-
-
0038342699
-
Functional analysis of the C-terminal domains of the site-specific recombinases XerC and XerD
-
Ferreira H., Butler-Cole B., Burgin A., Baker R., Sherratt D.J., and Arciszewska L.K. Functional analysis of the C-terminal domains of the site-specific recombinases XerC and XerD. J. Mol. Biol. 330 (2003) 15-27
-
(2003)
J. Mol. Biol.
, vol.330
, pp. 15-27
-
-
Ferreira, H.1
Butler-Cole, B.2
Burgin, A.3
Baker, R.4
Sherratt, D.J.5
Arciszewska, L.K.6
-
161
-
-
0034595513
-
Coordinated control of XerC and XerD catalytic activities during Holliday junction resolution
-
Arciszewska L.K., Baker R.A., Hallet B., and Sherratt D.J. Coordinated control of XerC and XerD catalytic activities during Holliday junction resolution. J. Mol. Biol. 299 (2000) 391-403
-
(2000)
J. Mol. Biol.
, vol.299
, pp. 391-403
-
-
Arciszewska, L.K.1
Baker, R.A.2
Hallet, B.3
Sherratt, D.J.4
-
162
-
-
0035823229
-
Switching catalytic activity in the XerCD site-specific recombination machine
-
Ferreira H., Sherratt D., and Arciszewska L. Switching catalytic activity in the XerCD site-specific recombination machine. J. Mol. Biol. 312 (2001) 45-57
-
(2001)
J. Mol. Biol.
, vol.312
, pp. 45-57
-
-
Ferreira, H.1
Sherratt, D.2
Arciszewska, L.3
-
163
-
-
0024214884
-
Bacteriophage lambda site-specific recombination proceeds with a defined order of strand exchanges
-
Kitts P.A., and Nash H.A. Bacteriophage lambda site-specific recombination proceeds with a defined order of strand exchanges. J. Mol. Biol. 204 (1988) 95-107
-
(1988)
J. Mol. Biol.
, vol.204
, pp. 95-107
-
-
Kitts, P.A.1
Nash, H.A.2
-
164
-
-
0027427546
-
Complementation of bacteriophage lambda integrase mutants: Evidence for an intersubunit active site
-
Han Y.W., Gumport R.I., and Gardner J.F. Complementation of bacteriophage lambda integrase mutants: Evidence for an intersubunit active site. EMBO J. 12 (1993) 4577-4584
-
(1993)
EMBO J.
, vol.12
, pp. 4577-4584
-
-
Han, Y.W.1
Gumport, R.I.2
Gardner, J.F.3
-
165
-
-
0028168871
-
Lambda integrase cleaves DNA in cis
-
Nunes-Düby S.E., Tirumalai R.S., Dorgai L., Yagil E., Weisberg R.A., and Landy A. Lambda integrase cleaves DNA in cis. EMBO J. 13 (1994) 4421-4430
-
(1994)
EMBO J.
, vol.13
, pp. 4421-4430
-
-
Nunes-Düby, S.E.1
Tirumalai, R.S.2
Dorgai, L.3
Yagil, E.4
Weisberg, R.A.5
Landy, A.6
-
166
-
-
0001656001
-
Flexibility in DNA recombination: Structure of the lambda integrase catalytic core [see comments]
-
Kwon H.J., Tirumalai R., Landy A., and Ellenberger T. Flexibility in DNA recombination: Structure of the lambda integrase catalytic core [see comments]. Science 276 (1997) 126-131
-
(1997)
Science
, vol.276
, pp. 126-131
-
-
Kwon, H.J.1
Tirumalai, R.2
Landy, A.3
Ellenberger, T.4
-
167
-
-
0043127393
-
A conformational switch controls the DNA cleavage activity of lambda integrase
-
Aihara H., Kwon H.J., Nunes-Düby S.E., Landy A., and Ellenberger A. A conformational switch controls the DNA cleavage activity of lambda integrase. Mol. Cell 12 (2003) 187-198
-
(2003)
Mol. Cell
, vol.12
, pp. 187-198
-
-
Aihara, H.1
Kwon, H.J.2
Nunes-Düby, S.E.3
Landy, A.4
Ellenberger, A.5
-
168
-
-
0036928598
-
Regulation of site-specific recombination by the C-terminus of lambda integrase
-
Kazmierczak R.A., Swalla B.M., Burgin A.B., Gumport R.I., and Gardner J.F. Regulation of site-specific recombination by the C-terminus of lambda integrase. Nucleic Acids Res. 30 (2002) 5193-5204
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 5193-5204
-
-
Kazmierczak, R.A.1
Swalla, B.M.2
Burgin, A.B.3
Gumport, R.I.4
Gardner, J.F.5
-
169
-
-
0036923312
-
Attenuating functions of the C terminus of lambda integrase
-
Tekle M., Warren D.J., Biswas T., Ellenberger T., Landy A., and Nunes-Düby S.E. Attenuating functions of the C terminus of lambda integrase. J. Mol. Biol. 324 (2002) 649-665
-
(2002)
J. Mol. Biol.
, vol.324
, pp. 649-665
-
-
Tekle, M.1
Warren, D.J.2
Biswas, T.3
Ellenberger, T.4
Landy, A.5
Nunes-Düby, S.E.6
-
170
-
-
1542327704
-
Two structural features of lambda integrase that are critical for DNA cleavage by multimers but not by monomers
-
Lee S.Y., Aihara H., Ellenberger T., and Landy A. Two structural features of lambda integrase that are critical for DNA cleavage by multimers but not by monomers. Proc. Natl. Acad. Sci. USA 101 (2004) 2770-2775
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 2770-2775
-
-
Lee, S.Y.1
Aihara, H.2
Ellenberger, T.3
Landy, A.4
-
171
-
-
0023644993
-
Protein-protein interactions in a higher-order structure direct lambda site-specific recombination
-
Thompson J.F., de Vargas L.M., Skinner S.E., and Landy A. Protein-protein interactions in a higher-order structure direct lambda site-specific recombination. J. Mol. Biol. 195 (1987) 481-493
-
(1987)
J. Mol. Biol.
, vol.195
, pp. 481-493
-
-
Thompson, J.F.1
de Vargas, L.M.2
Skinner, S.E.3
Landy, A.4
-
172
-
-
0023029428
-
Mutational analysis of integrase arm-type binding sites of bacteriophage lambda. Integration and excision involve distinct interactions of integrase with arm-type sites
-
Bauer C.E., Hesse S.D., Gumport R.I., and Gardner J.F. Mutational analysis of integrase arm-type binding sites of bacteriophage lambda. Integration and excision involve distinct interactions of integrase with arm-type sites. J. Mol. Biol. 192 (1986) 513-527
-
(1986)
J. Mol. Biol.
, vol.192
, pp. 513-527
-
-
Bauer, C.E.1
Hesse, S.D.2
Gumport, R.I.3
Gardner, J.F.4
-
173
-
-
0025372188
-
A comparison of the effects of single-base and triple-base changes in the integrase arm-type binding sites on the site-specific recombination of bacteriophage lambda
-
Numrych T.E., Gumport R.I., and Gardner J.F. A comparison of the effects of single-base and triple-base changes in the integrase arm-type binding sites on the site-specific recombination of bacteriophage lambda. Nucl. Acids Res. 18 (1990) 3953-3959
-
(1990)
Nucl. Acids Res.
, vol.18
, pp. 3953-3959
-
-
Numrych, T.E.1
Gumport, R.I.2
Gardner, J.F.3
-
174
-
-
0037133558
-
Arm-site binding by lambda-integrase: Solution structure and functional characterization of its amino-terminal domain
-
Wojciak J.M., Sarkar D., Landy A., and Clubb R.T. Arm-site binding by lambda-integrase: Solution structure and functional characterization of its amino-terminal domain. Proc. Natl. Acad. Sci. USA 99 (2002) 3434-3439
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 3434-3439
-
-
Wojciak, J.M.1
Sarkar, D.2
Landy, A.3
Clubb, R.T.4
-
175
-
-
0033984721
-
The amino terminus of bacteriophage lambda integrase is involved in protein-protein interactions during recombination
-
Jessop L., Bankhead T., Wong D., and Segall A.M. The amino terminus of bacteriophage lambda integrase is involved in protein-protein interactions during recombination. J. Bacteriol. 182 (2000) 1024-1034
-
(2000)
J. Bacteriol.
, vol.182
, pp. 1024-1034
-
-
Jessop, L.1
Bankhead, T.2
Wong, D.3
Segall, A.M.4
-
176
-
-
0038154020
-
Identification of the lambda integrase surface that interacts with Xis reveals a residue that is also critical for Int dimer formation
-
Warren D., Sam M.D., Manley K., Sarkar D., Lee S.Y., Abbani M., Wojciak J.M., Clubb R.T., and Landy A. Identification of the lambda integrase surface that interacts with Xis reveals a residue that is also critical for Int dimer formation. Proc. Natl. Acad. Sci. USA 100 (2003) 8176-8181
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 8176-8181
-
-
Warren, D.1
Sam, M.D.2
Manley, K.3
Sarkar, D.4
Lee, S.Y.5
Abbani, M.6
Wojciak, J.M.7
Clubb, R.T.8
Landy, A.9
-
177
-
-
0037313238
-
Conservation of structure and function among tyrosine recombinases: Homology-based modeling of the lambda integrase core-binding domain
-
Swalla B.M., Gumport R.I., and Gardner J.F. Conservation of structure and function among tyrosine recombinases: Homology-based modeling of the lambda integrase core-binding domain. Nucleic Acids Res. 31 (2003) 805-818
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 805-818
-
-
Swalla, B.M.1
Gumport, R.I.2
Gardner, J.F.3
-
178
-
-
0024295418
-
Autonomous DNA binding domains of lambda integrase recognize two different sequence families
-
Moitoso de Vargas L., Pargellis C.A., Hasan N.M., Bushman E.W., and Landy A. Autonomous DNA binding domains of lambda integrase recognize two different sequence families. Cell 54 (1988) 923-929
-
(1988)
Cell
, vol.54
, pp. 923-929
-
-
Moitoso de Vargas, L.1
Pargellis, C.A.2
Hasan, N.M.3
Bushman, E.W.4
Landy, A.5
-
179
-
-
0024386798
-
Dynamic, structural, and regulatory aspects of lambda site-specific recombination
-
Landy A. Dynamic, structural, and regulatory aspects of lambda site-specific recombination. Ann. Rev. Biochem. 58 (1989) 913-949
-
(1989)
Ann. Rev. Biochem.
, vol.58
, pp. 913-949
-
-
Landy, A.1
-
180
-
-
0025223119
-
Mapping of a higher order protein-DNA complex: Two kinds of long-range interactions in lambda attL
-
Kim S., Moitoso de Vargas L., Nunes-Düby S.E., and Landy A. Mapping of a higher order protein-DNA complex: Two kinds of long-range interactions in lambda attL. Cell 63 (1990) 773-781
-
(1990)
Cell
, vol.63
, pp. 773-781
-
-
Kim, S.1
Moitoso de Vargas, L.2
Nunes-Düby, S.E.3
Landy, A.4
-
181
-
-
0035282917
-
The small DNA binding domain of lambda integrase is a context-sensitive modulator of recombinase functions
-
Sarkar D., Radman-Livaja M., and Landy A. The small DNA binding domain of lambda integrase is a context-sensitive modulator of recombinase functions. EMBO J. 20 (2001) 1203-1212
-
(2001)
EMBO J.
, vol.20
, pp. 1203-1212
-
-
Sarkar, D.1
Radman-Livaja, M.2
Landy, A.3
-
182
-
-
0344806949
-
Arm sequences contribute to the architecture and catalytic function of a lambda integrase-Holliday junction complex
-
Radman-Livaja M., Shaw C., Azaro M., Biswas T., Ellenberger T., and Landy A. Arm sequences contribute to the architecture and catalytic function of a lambda integrase-Holliday junction complex. Mol. Cell 11 (2003) 783-794
-
(2003)
Mol. Cell
, vol.11
, pp. 783-794
-
-
Radman-Livaja, M.1
Shaw, C.2
Azaro, M.3
Biswas, T.4
Ellenberger, T.5
Landy, A.6
-
183
-
-
0021710080
-
E. coli integration host factor binds to specific sites in DNA
-
Craig N.L., and Nash H.A. E. coli integration host factor binds to specific sites in DNA. Cell 39 (1984) 707-716
-
(1984)
Cell
, vol.39
, pp. 707-716
-
-
Craig, N.L.1
Nash, H.A.2
-
184
-
-
0028147923
-
Architectural elements in nucleoprotein complexes: Interchangeability of specific and nonspecific DNA binding proteins
-
Segall A.M., Goodman S.D., and Nash H.A. Architectural elements in nucleoprotein complexes: Interchangeability of specific and nonspecific DNA binding proteins. EMBO J. 13 (1994) 4536-4548
-
(1994)
EMBO J.
, vol.13
, pp. 4536-4548
-
-
Segall, A.M.1
Goodman, S.D.2
Nash, H.A.3
-
185
-
-
0030451819
-
Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn
-
Rice P.A., Yang S.-W., Mizuuchi K., and Nash H.A. Crystal structure of an IHF-DNA complex: A protein-induced DNA U-turn. Cell 87 (1996) 1295-1306
-
(1996)
Cell
, vol.87
, pp. 1295-1306
-
-
Rice, P.A.1
Yang, S.-W.2
Mizuuchi, K.3
Nash, H.A.4
-
186
-
-
0024340762
-
DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase
-
Moitoso de Vargas L., Kim S., and Landy A. DNA looping generated by DNA bending protein IHF and the two domains of lambda integrase. Science 244 (1989) 1457-1461
-
(1989)
Science
, vol.244
, pp. 1457-1461
-
-
Moitoso de Vargas, L.1
Kim, S.2
Landy, A.3
-
187
-
-
0036724215
-
Interactions between integrase and excisionase in the phage lambda excisive nucleoprotein complex
-
Cho E.H., Gumport R.I., and Gardner J.F. Interactions between integrase and excisionase in the phage lambda excisive nucleoprotein complex. J. Bacteriol. 184 (2002) 5200-5203
-
(2002)
J. Bacteriol.
, vol.184
, pp. 5200-5203
-
-
Cho, E.H.1
Gumport, R.I.2
Gardner, J.F.3
-
188
-
-
0036928819
-
Regulation of directionality in bacteriophage lambda site-specific recombination: Structure of the Xis protein
-
Sam M.D., Papagiannis C.V., Connolly K.M., Corselli L., Iwahara J., Lee J., Phillips M., Wojciak J.M., Johnson R.C., and Clubb R.T. Regulation of directionality in bacteriophage lambda site-specific recombination: Structure of the Xis protein. J. Mol. Biol. 324 (2002) 791-805
-
(2002)
J. Mol. Biol.
, vol.324
, pp. 791-805
-
-
Sam, M.D.1
Papagiannis, C.V.2
Connolly, K.M.3
Corselli, L.4
Iwahara, J.5
Lee, J.6
Phillips, M.7
Wojciak, J.M.8
Johnson, R.C.9
Clubb, R.T.10
-
189
-
-
0141818942
-
The molecular basis of cooperative DNA binding between lambda integrase and excisionase
-
Swalla B.M., Cho E.H., Gumport R.I., and Gardner J.F. The molecular basis of cooperative DNA binding between lambda integrase and excisionase. Mol. Microbiol. 50 (2003) 89-99
-
(2003)
Mol. Microbiol.
, vol.50
, pp. 89-99
-
-
Swalla, B.M.1
Cho, E.H.2
Gumport, R.I.3
Gardner, J.F.4
-
190
-
-
0022545522
-
Host protein requirements for in vitro site-specific DNA inversion
-
Johnson R.C., Bruist M.F., and Simon M.I. Host protein requirements for in vitro site-specific DNA inversion. Cell 46 (1986) 531-539
-
(1986)
Cell
, vol.46
, pp. 531-539
-
-
Johnson, R.C.1
Bruist, M.F.2
Simon, M.I.3
-
191
-
-
0028893895
-
The Holliday junction intermediates of lambda integrative and excisive recombination respond differently to the bending proteins integration host factor and excisionase
-
Franz B., and Landy A. The Holliday junction intermediates of lambda integrative and excisive recombination respond differently to the bending proteins integration host factor and excisionase. EMBO J. 14 (1995) 397-406
-
(1995)
EMBO J.
, vol.14
, pp. 397-406
-
-
Franz, B.1
Landy, A.2
-
192
-
-
0345518010
-
Alterations in the directionality of lambda site-specific recombination catalyzed by mutant integrases in vivo
-
Christ N., and Droge P. Alterations in the directionality of lambda site-specific recombination catalyzed by mutant integrases in vivo. J. Mol. Biol. 288 (1999) 825-836
-
(1999)
J. Mol. Biol.
, vol.288
, pp. 825-836
-
-
Christ, N.1
Droge, P.2
|