메뉴 건너뛰기




Volumn 15, Issue 5, 1996, Pages 1172-1181

Xer-mediated site-specific recombination in vitro

Author keywords

cer; psi; Recombinase; Site specific recombination; Xer

Indexed keywords

CELL PROTEIN; RECOMBINASE; TYROSINE;

EID: 0029964042     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1002/j.1460-2075.1996.tb00456.x     Document Type: Article
Times cited : (119)

References (44)
  • 1
    • 0026586392 scopus 로고
    • Evidence for a second conserved arginine residue in the integrase family of recombinase proteins
    • Abremski, K.E. and Hoess, R.H. (1992) Evidence for a second conserved arginine residue in the integrase family of recombinase proteins. Protein Engng, 3, 87-91.
    • (1992) Protein Engng , vol.3 , pp. 87-91
    • Abremski, K.E.1    Hoess, R.H.2
  • 2
    • 0029030020 scopus 로고
    • Xer site-specific recombination in vitro
    • Arciszewska, L.K. and Sherratt, D.J. (1995) Xer site-specific recombination in vitro. EMBO J., 14, 2112-2120.
    • (1995) EMBO J. , vol.14 , pp. 2112-2120
    • Arciszewska, L.K.1    Sherratt, D.J.2
  • 3
    • 0028999728 scopus 로고
    • Effects of Holliday junction position on Xer-mediated recombination in vitro
    • Arciszewska, L.K., Grainge, I. and Sherratt, D.J. (1995) Effects of Holliday junction position on Xer-mediated recombination in vitro. EMBO J., 14, 2651-2660.
    • (1995) EMBO J. , vol.14 , pp. 2651-2660
    • Arciszewska, L.K.1    Grainge, I.2    Sherratt, D.J.3
  • 4
    • 0022669622 scopus 로고
    • The integrase family of site-specific recombinases: Regional similarities and global diversity
    • Argos, P. et al. (1986) The integrase family of site-specific recombinases: regional similarities and global diversity. EMBO J., 5, 433-440.
    • (1986) EMBO J. , vol.5 , pp. 433-440
    • Argos, P.1
  • 5
    • 0019447996 scopus 로고
    • A novel role for site-specific recombination in maintenance of bacterial replicons
    • Austin, S., Ziese, M. and Sternberg, N. (1981) A novel role for site-specific recombination in maintenance of bacterial replicons. Cell, 25, 729-736.
    • (1981) Cell , vol.25 , pp. 729-736
    • Austin, S.1    Ziese, M.2    Sternberg, N.3
  • 6
    • 0015451273 scopus 로고
    • Pedigrees of some mutant strains of Escherichia coli K 12
    • Bachmann, B.J. (1972) Pedigrees of some mutant strains of Escherichia coli K 12. Bacteriol. Rev., 36, 526-557.
    • (1972) Bacteriol. Rev. , vol.36 , pp. 526-557
    • Bachmann, B.J.1
  • 7
    • 0025945415 scopus 로고
    • Encherichia coli XerC recombinase is required for chromosomal segregation at cell division
    • Blakely, G., Colloms, S.D., May, G , Burke, M. and Sherratt, D.J. (1991) Encherichia coli XerC recombinase is required for chromosomal segregation at cell division. New Biol., 3, 789-798
    • (1991) New Biol. , vol.3 , pp. 789-798
    • Blakely, G.1    Colloms, S.D.2    May, G.3    Burke, M.4    Sherratt, D.J.5
  • 8
    • 0027422093 scopus 로고
    • Two related recombinases are required for site-specific recombination at dif and cer in Escherichia coli K 12
    • Blakely, G., May, G., McCulloch, R., Arciszewska, L., Burke, M , Lovett, S. and Sherratt, D.J. (1993) Two related recombinases are required for site-specific recombination at dif and cer in Escherichia coli K 12. Cell. 75, 351-361.
    • (1993) Cell , vol.75 , pp. 351-361
    • Blakely, G.1    May, G.2    McCulloch, R.3    Arciszewska, L.4    Burke, M.5    Lovett, S.6    Sherratt, D.J.7
  • 9
    • 0027956735 scopus 로고
    • Mutant Escherichia coli arginine repressor proteins that fail to bind L-arginine, yet retain the ability to bind their normal DNA-binding sites
    • Burke, M , Merican, A.F., and Sherratt, D.J. (1994) Mutant Escherichia coli arginine repressor proteins that fail to bind L-arginine, yet retain the ability to bind their normal DNA-binding sites. Mol. Microbiol., 13, 609-618.
    • (1994) Mol. Microbiol. , vol.13 , pp. 609-618
    • Burke, M.1    Merican, A.F.2    Sherratt, D.J.3
  • 10
    • 0026633154 scopus 로고
    • Complete nucleolide sequence and gene organisation of plasmid NTP16
    • Cannon, P. and Strike, P. (1992) Complete nucleolide sequence and gene organisation of plasmid NTP16. Plasmid, 27, 220-230
    • (1992) Plasmid , vol.27 , pp. 220-230
    • Cannon, P.1    Strike, P.2
  • 11
    • 0029146877 scopus 로고
    • carP, involved in pyrimidine regulation of the Escherichia coli carbamoylphosphate synthetase operon encodes a sequence-specific DNA-binding protein identical to XerB and PepA, also required for resolution of ColE1 multimers
    • Charlier, D. Hassanzadeh Gh., G Kholti, A., Gigot, D., Piérard, A. and Glansdorff, N. (1995) carP, involved in pyrimidine regulation of the Escherichia coli carbamoylphosphate synthetase operon encodes a sequence-specific DNA-binding protein identical to XerB and PepA, also required for resolution of ColE1 multimers. J Mol. Biol., 250, 392-406.
    • (1995) J Mol. Biol. , vol.250 , pp. 392-406
    • Charlier, D.1    Hassanzadeh, Gh.2    G Kholti, A.3    Gigot, D.4    Piérard, A.5    Glansdorff, N.6
  • 12
    • 0025954365 scopus 로고
    • Site-specific recombination promoted by a short DNA segment of plasmid R1 and by a homologous segment in the terminus region of the Escherichia colt chromosome
    • Clerget, M. (1991) Site-specific recombination promoted by a short DNA segment of plasmid R1 and by a homologous segment in the terminus region of the Escherichia colt chromosome. New Biol., 3, 780-788.
    • (1991) New Biol. , vol.3 , pp. 780-788
    • Clerget, M.1
  • 13
    • 0025602270 scopus 로고
    • Recombination at ColE1 cer requires the Escherichia coli xerC gene product, a member of the lambda integrase family of site-specific recombinases
    • Colloms, S.D , Sykora, P., Szatmari, G. and Sherratt, D.J. (1990) Recombination at ColE1 cer requires the Escherichia coli xerC gene product, a member of the lambda integrase family of site-specific recombinases. J. Bacteriol., 172, 6973-6980.
    • (1990) J. Bacteriol. , vol.172 , pp. 6973-6980
    • Colloms, S.D.1    Sykora, P.2    Szatmari, G.3    Sherratt, D.J.4
  • 14
    • 0028225930 scopus 로고
    • Plasmid pSC101 harbours a recombination site, psi, which is able to resolve plasmid multimers and to substitute for the analagous chromosomal Escherichia coli site dif
    • Cornet, F., Mortier, I., Patte, J. and Louarn, J.-M. (1994) Plasmid pSC101 harbours a recombination site, psi, which is able to resolve plasmid multimers and to substitute for the analagous chromosomal Escherichia coli site dif. J. Bacteriol., 176, 3188-3195.
    • (1994) J. Bacteriol. , vol.176 , pp. 3188-3195
    • Cornet, F.1    Mortier, I.2    Patte, J.3    Louarn, J.-M.4
  • 15
    • 0026331068 scopus 로고
    • Formation and resolution of recombination intermediates by Escherichia coli RecA and RuvC proteins
    • Dunderdale, H.J., Benson, F.E., Parsons, C.A., Sharples, G J., Lloyd, R.G. and West, S.C. (1991) Formation and resolution of recombination intermediates by Escherichia coli RecA and RuvC proteins. Nature, 354, 506-510.
    • (1991) Nature , vol.354 , pp. 506-510
    • Dunderdale, H.J.1    Benson, F.E.2    Parsons, C.A.3    Sharples, G.J.4    Lloyd, R.G.5    West, S.C.6
  • 17
    • 0000653186 scopus 로고
    • Biosynthesis of arginine and polyamines
    • Neidhardt, F.C. (ed.). American Society tor Microbiology, Washington DC
    • Glansdorff, N. (1987) Biosynthesis of arginine and polyamines. In Neidhardt, F.C. (ed.). Salmonella typhimurium and Escherichia coli, Cellular and Molecular Biology. American Society tor Microbiology, Washington DC, pp. 321-344.
    • (1987) Salmonella Typhimurium and Escherichia Coli, Cellular and Molecular Biology , pp. 321-344
    • Glansdorff, N.1
  • 18
    • 0029026288 scopus 로고
    • Involvement of ArgR and PepA in the pairing of ColE1 dimer resolution sites
    • Guhathakurta, A. and Summers, D. (1995) Involvement of ArgR and PepA in the pairing of ColE1 dimer resolution sites. Microbiology, 141, 1163-1171.
    • (1995) Microbiology , vol.141 , pp. 1163-1171
    • Guhathakurta, A.1    Summers, D.2
  • 19
    • 0021358196 scopus 로고
    • Maintenance of multicopy plasmid CloDF13 in Escherichia coli cells: Evidence for site-specific recombination at parB
    • Hakkaart, M.J.J., van den Elzen, P.J M., Veltkamp, E. and Nijkamp, H.J.H. (1984) Maintenance of multicopy plasmid CloDF13 in Escherichia coli cells: evidence for site-specific recombination at parB Cell, 36, 203-209.
    • (1984) Cell , vol.36 , pp. 203-209
    • Hakkaart, M.J.J.1    Van Den Elzen, P.J.M.2    Veltkamp, E.3    Nijkamp, H.J.H.4
  • 20
    • 0023430457 scopus 로고
    • Isolation and characterisation of intermediates in site-specific recombination
    • Hoess, R.H., Wierzbicki, A. and Abremski, K. (1987) Isolation and characterisation of intermediates in site-specific recombination. Proc. Natl Acad. Sci. USA, 84, 6840-6844.
    • (1987) Proc. Natl Acad. Sci. USA , vol.84 , pp. 6840-6844
    • Hoess, R.H.1    Wierzbicki, A.2    Abremski, K.3
  • 21
    • 0021168201 scopus 로고
    • Resolution of synthetic att-site Holliday structures by the integrase protein of bacteriophage lambda
    • Hsu, P.L. and Landy, A. (1984) Resolution of synthetic att-site Holliday structures by the integrase protein of bacteriophage lambda. Nature, 311, 721-726.
    • (1984) Nature , vol.311 , pp. 721-726
    • Hsu, P.L.1    Landy, A.2
  • 22
    • 0026064725 scopus 로고
    • Escherichia coli RuvC is an endonuclease that resolves the Holliday structure
    • Iwasaki, H., Takahagi, M., Shiba, T., Nakatu, A. and Shinagawa, H. (1991) Escherichia coli RuvC is an endonuclease that resolves the Holliday structure EMBO J , 10, 4381-4389.
    • (1991) EMBO J , vol.10 , pp. 4381-4389
    • Iwasaki, H.1    Takahagi, M.2    Shiba, T.3    Nakatu, A.4    Shinagawa, H.5
  • 23
    • 0024296991 scopus 로고
    • An intermediate in the phage-lambda site-specific recombination reaction is revealed by phosphorothioate substitution in the DNA
    • Kitts, P.A. and Nash, H.A. (1988a) An intermediate in the phage-lambda site-specific recombination reaction is revealed by phosphorothioate substitution in the DNA. Nucleic Acids Res., 16, 6839-6856.
    • (1988) Nucleic Acids Res. , vol.16 , pp. 6839-6856
    • Kitts, P.A.1    Nash, H.A.2
  • 24
    • 0024214884 scopus 로고
    • Bacteriophage-lambda site-specific recombination proceeds with a defined order of strand exchanges
    • Kitts, P A. and Nash, H.A. (1988b) Bacteriophage-lambda site-specific recombination proceeds with a defined order of strand exchanges. J. Mol. Biol , 204, 95-107.
    • (1988) J. Mol. Biol , vol.204 , pp. 95-107
    • Kitts, P.A.1    Nash, H.A.2
  • 25
    • 0025954366 scopus 로고
    • dif, a recA-independent recombination site in the terminus region of the chromosome of Escherichia coli
    • Kuempel, P.A., Henson, J.M., Dircks, L , Tecklenburg, M. and Lim, D.F. (1991) dif, a recA-independent recombination site in the terminus region of the chromosome of Escherichia coli. New Biol., 3, 799-949.
    • (1991) New Biol. , vol.3 , pp. 799-949
    • Kuempel, P.A.1    Henson, J.M.2    Dircks, L.3    Tecklenburg, M.4    Lim, D.F.5
  • 26
    • 0028947364 scopus 로고
    • Site-specific recombination in the replication terminus region of Escherichia coli: Functional replacement of dif
    • Leslie, N. and Sherratt, D.J (1995) Site-specific recombination in the replication terminus region of Escherichia coli: functional replacement of dif. EMBO J, 14, 1561-1570.
    • (1995) EMBO J , vol.14 , pp. 1561-1570
    • Leslie, N.1    Sherratt, D.J.2
  • 27
    • 0023431902 scopus 로고
    • Nucleotide sequence of the argR gene of Escherichia coli K12 and isolation of its product, the arginine repressor
    • Lim, D , Oppenheim, J.D., Eckhardt, T. and Maas, W.K. (1987) Nucleotide sequence of the argR gene of Escherichia coli K12 and isolation of its product, the arginine repressor. Proc. Natl Acad. Sci. USA, 84, 697-6701.
    • (1987) Proc. Natl Acad. Sci. USA , vol.84 , pp. 697-6701
    • Lim, D.1    Oppenheim, J.D.2    Eckhardt, T.3    Maas, W.K.4
  • 28
    • 0028349558 scopus 로고
    • Xer-mediated site-specific recombination at cer generates Holliday junctions in vivo
    • McCulloch, R., Coggins, L.W., Colloms, S.D. and Sherratt, D.J. (1994a) Xer-mediated site-specific recombination at cer generates Holliday junctions in vivo. EMBO J., 13, 1844-1855.
    • (1994) EMBO J. , vol.13 , pp. 1844-1855
    • McCulloch, R.1    Coggins, L.W.2    Colloms, S.D.3    Sherratt, D.J.4
  • 29
    • 0028237249 scopus 로고
    • Peptidase activity of Excherichia coli aminopeptidase A is not required for its role in Xer site-specific recombination
    • McCulloch, R., Burke, M.E. and Sherratt, D.J. (1994b) Peptidase activity of Excherichia coli aminopeptidase A is not required for its role in Xer site-specific recombination. Mol. Microbiol., 12, 241-251.
    • (1994) Mol. Microbiol. , vol.12 , pp. 241-251
    • McCulloch, R.1    Burke, M.E.2    Sherratt, D.J.3
  • 30
    • 0023741168 scopus 로고
    • Holliday intermediates and reaction by-products in Flp protein-promoted site-specific recombination
    • Meyer-Leon, L., Huang, L.C., Umlauf, S.W., Cox, M.M. and Inman, R.B. (1988) Holliday intermediates and reaction by-products in Flp protein-promoted site-specific recombination. Mol. Cell. Biol., 8, 3784-3796.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 3784-3796
    • Meyer-Leon, L.1    Huang, L.C.2    Umlauf, S.W.3    Cox, M.M.4    Inman, R.B.5
  • 31
    • 0025098475 scopus 로고
    • Characterisation of Holliday structures in Flp protein-promoted site-specific recombination
    • Meyer-Leon, L., Inman, R.B. and Cox, M.M. (1990) Characterisation of Holliday structures in Flp protein-promoted site-specific recombination. Mol. Cell. Biol., 10, 235-242.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 235-242
    • Meyer-Leon, L.1    Inman, R.B.2    Cox, M.M.3
  • 32
    • 0023667024 scopus 로고
    • Site-specific recombination intermediates trapped with suicide substrates
    • Nunes-Düby, S.E., Matsumoto, L and Landy, A. (1987) Site-specific recombination intermediates trapped with suicide substrates. Cell, 50, 779-788.
    • (1987) Cell , vol.50 , pp. 779-788
    • Nunes-Düby, S.E.1    Matsumoto, L.2    Landy, A.3
  • 33
    • 0026748245 scopus 로고
    • Ligation activity of Flp recombinase
    • Pan, G. and Sadowski, P.D. (1992) Ligation activity of Flp recombinase. J. Biol. Chem., 267, 12397-12399.
    • (1992) J. Biol. Chem. , vol.267 , pp. 12397-12399
    • Pan, G.1    Sadowski, P.D.2
  • 34
    • 0024278670 scopus 로고
    • Suicide recombination substrates yield covalent lambda integrase-DNA complexes and lead to identification of the active-site tyrosine
    • Pargellis, C.A., Nunes-Düby, S.E., Moitoso de Vargas, L. and Landy, A. (1988) Suicide recombination substrates yield covalent lambda integrase-DNA complexes and lead to identification of the active-site tyrosine. J. Biol. Chem., 263, 7678-7685.
    • (1988) J. Biol. Chem. , vol.263 , pp. 7678-7685
    • Pargellis, C.A.1    Nunes-Düby, S.E.2    Moitoso De Vargas, L.3    Landy, A.4
  • 35
    • 0023708318 scopus 로고
    • Steparrest mutants of Flp recombinase: Implications for the catalytic mechanism of DNA recombination
    • Parsons, R.L., Prasad, P.V , Harshey, R.M. and Jayaram, M. (1988) Steparrest mutants of Flp recombinase: implications for the catalytic mechanism of DNA recombination. Mol. Cell. Biol., 8, 3303-3310.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 3303-3310
    • Parsons, R.L.1    Prasad, P.V.2    Harshey, R.M.3    Jayaram, M.4
  • 38
    • 0001037223 scopus 로고
    • Topological selectivity in site-specific recombination
    • Sherratt, D.J (ed.), IRL Press at Oxford University Press, Oxford
    • Stark, W.M. and Boocock, M.R. (1995) Topological selectivity in site-specific recombination. In Sherratt, D.J (ed.), Mobile Genetic Elements. IRL Press at Oxford University Press, Oxford, pp. 101-129.
    • (1995) Mobile Genetic Elements , pp. 101-129
    • Stark, W.M.1    Boocock, M.R.2
  • 39
    • 0024293535 scopus 로고
    • The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the ColE1 cer locus
    • Stirling, C.J., Szatmari, G., Stewart, G , Smith, M.C.M. and Sherratt, D.J. (1988a) The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the ColE1 cer locus. EMBO J., 7, 4389-4395.
    • (1988) EMBO J. , vol.7 , pp. 4389-4395
    • Stirling, C.J.1    Szatmari, G.2    Stewart, G.3    Smith, M.C.M.4    Sherratt, D.J.5
  • 40
    • 0024080418 scopus 로고
    • Multicopy plasmid stability in Escherichia colt requires host-encoded functions that lead to plasmid site-specific recombination
    • Stirling, C.J., Stewart, G. and Sherratt, D.J. (1988b) Multicopy plasmid stability in Escherichia colt requires host-encoded functions that lead to plasmid site-specific recombination. Mol Gen. Genet., 214, 80-84.
    • (1988) Mol Gen. Genet. , vol.214 , pp. 80-84
    • Stirling, C.J.1    Stewart, G.2    Sherratt, D.J.3
  • 41
    • 0024316734 scopus 로고
    • xerB, an Escherichia coli xer gene required for ColE1 site-specific recombination, is identical to pepA, encoding aminopeptidase A, a protein with substantial similarity to bovine lens leucine aminopeptidase
    • Stirling, C.J., Colloms, S.D., Collins, J.F., Szatmari, G. and Sherratt, D.J. (1989) xerB, an Escherichia coli xer gene required for ColE1 site-specific recombination, is identical to pepA, encoding aminopeptidase A, a protein with substantial similarity to bovine lens leucine aminopeptidase. EMBO J., 8, 1623-1627.
    • (1989) EMBO J. , vol.8 , pp. 1623-1627
    • Stirling, C.J.1    Colloms, S.D.2    Collins, J.F.3    Szatmari, G.4    Sherratt, D.J.5
  • 42
    • 0024470852 scopus 로고
    • Derivatives of ColE1 cer show altered topological specificity in site-specific recombination
    • Summers, D.K. (1989) Derivatives of ColE1 cer show altered topological specificity in site-specific recombination. EMBO J., 8, 309-315.
    • (1989) EMBO J. , vol.8 , pp. 309-315
    • Summers, D.K.1
  • 43
    • 0021419102 scopus 로고
    • Multimerisation of high copy number plasmids causes instability: ColE1 encodes a determinant for plasmid monomerisation and stability
    • Summers, D.K. and Sherratt, D.J. (1984) Multimerisation of high copy number plasmids causes instability: ColE1 encodes a determinant for plasmid monomerisation and stability. Cell, 36, 1097-1103
    • (1984) Cell , vol.36 , pp. 1097-1103
    • Summers, D.K.1    Sherratt, D.J.2
  • 44
    • 0023968566 scopus 로고
    • Resolution of ColE1 dimers requires DNA sequences implicated in the three dimensional organization of the cer site
    • Summers, D.K. and Sherratt, D.J. (1988) Resolution of ColE1 dimers requires DNA sequences implicated in the three dimensional organization of the cer site. EMBO J., 7, 851-858.
    • (1988) EMBO J. , vol.7 , pp. 851-858
    • Summers, D.K.1    Sherratt, D.J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.