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Volumn 61, Issue 2, 2005, Pages 216-225

In vitro selection of high temperature Zn2+-dependent DNAzymes

Author keywords

Catalytic DNA; Deoxyribozymes; DNAzymes; High temperature; In vitro selection; Metal ions; Ribozymes; RNA hydrolysis

Indexed keywords

DEOXYRIBONUCLEASE; DNA; OLIGONUCLEOTIDE; RIBOZYME; RNA; ZINC;

EID: 24744440575     PISSN: 00222844     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00239-004-0374-3     Document Type: Article
Times cited : (42)

References (76)
  • 2
    • 0345700253 scopus 로고    scopus 로고
    • A group II intron inserted into a bacterial heat-shock operon shows autocatalytc activity and unusual thermostability
    • Adamidi C, Fedorova O, Pyle AM (2003) A group II intron inserted into a bacterial heat-shock operon shows autocatalytc activity and unusual thermostability. Biochemistry 42:3408-3418
    • (2003) Biochemistry , vol.42 , pp. 3408-3418
    • Adamidi, C.1    Fedorova, O.2    Pyle, A.M.3
  • 3
    • 0031053277 scopus 로고    scopus 로고
    • A kinetic and thermodynamic analysis of cleavage site mutations in the hammerhead ribozyme
    • Baidya N, Uhlenbeck OC (1997) A kinetic and thermodynamic analysis of cleavage site mutations in the hammerhead ribozyme. Biochemistry 36:1108-1114
    • (1997) Biochemistry , vol.36 , pp. 1108-1114
    • Baidya, N.1    Uhlenbeck, O.C.2
  • 4
    • 0027434244 scopus 로고
    • Thermal unfolding of a group I ribozyme: The low-temperature transition is primarily disruption of tertiary structure
    • Banerjee AR, Jaeger JA, Turner DH (1993) Thermal unfolding of a group I ribozyme: the low-temperature transition is primarily disruption of tertiary structure. Biochemistry 32:153-163
    • (1993) Biochemistry , vol.32 , pp. 153-163
    • Banerjee, A.R.1    Jaeger, J.A.2    Turner, D.H.3
  • 5
    • 2342530310 scopus 로고    scopus 로고
    • Kinetic and thermodynamic characterization of the RNA-cleaving 8-17 deoxyribozyme
    • Bonaccio M, Credali A, Peracchi A (2004) Kinetic and thermodynamic characterization of the RNA-cleaving 8-17 deoxyribozyme. Nucleic Acids Res 32:916-925
    • (2004) Nucleic Acids Res , vol.32 , pp. 916-925
    • Bonaccio, M.1    Credali, A.2    Peracchi, A.3
  • 6
  • 7
    • 0000917638 scopus 로고    scopus 로고
    • In vitro selection of catalytic polynucleotides
    • Breaker RR (1997b) In vitro selection of catalytic polynucleotides. Chem Rev 97:371-390
    • (1997) Chem Rev , vol.97 , pp. 371-390
    • Breaker, R.R.1
  • 8
    • 0034671699 scopus 로고    scopus 로고
    • Making catalytic DNAs
    • Breaker RR (2000) Making catalytic DNAs. Science 290:2095-2096
    • (2000) Science , vol.290 , pp. 2095-2096
    • Breaker, R.R.1
  • 9
    • 0028675028 scopus 로고
    • A DNA enzyme that cleaves RNA
    • Breaker RR, Joyce GF (1994) A DNA enzyme that cleaves RNA. Chem Biol 1:223-229
    • (1994) Chem Biol , vol.1 , pp. 223-229
    • Breaker, R.R.1    Joyce, G.F.2
  • 10
    • 0028983570 scopus 로고
    • 2+-dependent RNA phosphoesterase activity
    • 2+-dependent RNA phosphoesterase activity. Chem Biol 2:655-660
    • (1995) Chem Biol , vol.2 , pp. 655-660
    • Breaker, R.R.1    Joyce, G.F.2
  • 11
    • 0038131065 scopus 로고    scopus 로고
    • A lead-dependent DNAzyme with a two step mechanism
    • Brown AK, Li J, Pavot CMB, Lu Y (2003) A lead-dependent DNAzyme with a two step mechanism. Biochemistry 42:7152-7161
    • (2003) Biochemistry , vol.42 , pp. 7152-7161
    • Brown, A.K.1    Li, J.2    Pavot, C.M.B.3    Lu, Y.4
  • 12
    • 0027286169 scopus 로고
    • Characterization of ribonuclease P RNAs from thermophilic bacteria
    • Brown JW, Haas ES, Pace NR (1993) Characterization of ribonuclease P RNAs from thermophilic bacteria. Nucleic Acids Res 21:671-679
    • (1993) Nucleic Acids Res , vol.21 , pp. 671-679
    • Brown, J.W.1    Haas, E.S.2    Pace, N.R.3
  • 13
    • 0036089642 scopus 로고    scopus 로고
    • Improving metal ion specificity during in vitro selection of catalytic DNA
    • Bruesehoff PJ, Li J, Augustine AJ, Lu Y (2002) Improving metal ion specificity during in vitro selection of catalytic DNA. Comb Chem High T Scr 5:327-335
    • (2002) Comb Chem High T Scr , vol.5 , pp. 327-335
    • Bruesehoff, P.J.1    Li, J.2    Augustine, A.J.3    Lu, Y.4
  • 14
    • 0015239609 scopus 로고
    • Interaction of metal ions with nucleic acids and related compounds. XVII. Mechanism of degradation of polyribonucleotides and oligoribonucleotides by zinc(II) ions
    • Butzow JJ, Eichhorn GL (1971) Interaction of metal ions with nucleic acids and related compounds. XVII. Mechanism of degradation of polyribonucleotides and oligoribonucleotides by zinc(II) ions. Biochemistry 10:2019-2027
    • (1971) Biochemistry , vol.10 , pp. 2019-2027
    • Butzow, J.J.1    Eichhorn, G.L.2
  • 16
    • 0030482173 scopus 로고    scopus 로고
    • In vitro selection of self-cleaving DNAs
    • Carmi N, Shultz LA, Breaker RR (1996) In vitro selection of self-cleaving DNAs. Chem Biol 3:1039-1046
    • (1996) Chem Biol , vol.3 , pp. 1039-1046
    • Carmi, N.1    Shultz, L.A.2    Breaker, R.R.3
  • 17
    • 0029902343 scopus 로고    scopus 로고
    • Small RNA-divalent domains
    • Ciesiolka J, Yarus M (1996) Small RNA-divalent domains. RNA 2:785-793
    • (1996) RNA , vol.2 , pp. 785-793
    • Ciesiolka, J.1    Yarus, M.2
  • 19
    • 0029037713 scopus 로고
    • A DNA metalloenzyme with DNA ligase activity
    • Cuenoud B, Szostak JW (1995) A DNA metalloenzyme with DNA ligase activity. Nature 375:611-614
    • (1995) Nature , vol.375 , pp. 611-614
    • Cuenoud, B.1    Szostak, J.W.2
  • 20
    • 0025074907 scopus 로고
    • In vitro selection of RNA molecules that bind specific ligands
    • Ellington AD, Szostak JW (1990) In vitro selection of RNA molecules that bind specific ligands. Nature 346:818-822
    • (1990) Nature , vol.346 , pp. 818-822
    • Ellington, A.D.1    Szostak, J.W.2
  • 23
    • 0030900384 scopus 로고    scopus 로고
    • Relationships between genomic G + C content, RNA secondary structures, and optimal growth temperature in prokaryotes
    • Galtier N, Lobry JR (1997) Relationships between genomic G + C content, RNA secondary structures, and optimal growth temperature in prokaryotes. J Mol Evol 44:632-636
    • (1997) J Mol Evol , vol.44 , pp. 632-636
    • Galtier, N.1    Lobry, J.R.2
  • 25
    • 0036828951 scopus 로고    scopus 로고
    • Evolution of Tetrahymena ribozyme mutants with increased structural stability
    • Guo F, Cech TR (2002) Evolution of Tetrahymena ribozyme mutants with increased structural stability. Nature Struct Biol 9:855-861
    • (2002) Nature Struct Biol , vol.9 , pp. 855-861
    • Guo, F.1    Cech, T.R.2
  • 26
    • 0030666652 scopus 로고    scopus 로고
    • A spermidine-induced conformational change of long-armed hammerhead ribozymes: Ionic requirements for fast cleavage kinetics
    • Hammann C, Hormes R, Sczakiel G, Tabler M (1997) A spermidine-induced conformational change of long-armed hammerhead ribozymes: ionic requirements for fast cleavage kinetics. Nucleic Acids Res 5:4715-4722
    • (1997) Nucleic Acids Res , vol.5 , pp. 4715-4722
    • Hammann, C.1    Hormes, R.2    Sczakiel, G.3    Tabler, M.4
  • 27
    • 0024524479 scopus 로고
    • Extraordinary stable structure of short single-stranded DNA fragments containing a specific base sequence: d(GCGAAAGC)
    • Hirao I, Nishimura Y, Naraoka T, Watanabe K, Arata Y, Miura K (1989) Extraordinary stable structure of short single-stranded DNA fragments containing a specific base sequence: d(GCGAAAGC). Nucleic Acids Res 17:2223-2231
    • (1989) Nucleic Acids Res , vol.17 , pp. 2223-2231
    • Hirao, I.1    Nishimura, Y.2    Naraoka, T.3    Watanabe, K.4    Arata, Y.5    Miura, K.6
  • 28
    • 0026743201 scopus 로고
    • Extraordinarily stable mini-hairpins; electrophoretical and thermal properties of the various sequence variants of d(GCGAAAGC) and their effect on DNA sequencing
    • Hirao I, Nishimura Y, Tagawa Y, Watanabe K, Miura K (1992) Extraordinarily stable mini-hairpins; electrophoretical and thermal properties of the various sequence variants of d(GCGAAAGC) and their effect on DNA sequencing. Nucleic Acids Res 20:3891-3896
    • (1992) Nucleic Acids Res , vol.20 , pp. 3891-3896
    • Hirao, I.1    Nishimura, Y.2    Tagawa, Y.3    Watanabe, K.4    Miura, K.5
  • 29
    • 0028247062 scopus 로고
    • Most compact hairpin-turn structure exerted by a short DNA fragment. d(GCGAAGC) in solution: An extraordinarily stable structure resistant to nucleases and heat
    • Hirao I, Kawai G, Yoshizawa S, Nishimura Y, Ishido Y, Watanabe K, Miura K (1994) Most compact hairpin-turn structure exerted by a short DNA fragment. d(GCGAAGC) in solution: an extraordinarily stable structure resistant to nucleases and heat. Nucleic Acids Res 22:576-582
    • (1994) Nucleic Acids Res , vol.22 , pp. 576-582
    • Hirao, I.1    Kawai, G.2    Yoshizawa, S.3    Nishimura, Y.4    Ishido, Y.5    Watanabe, K.6    Miura, K.7
  • 30
    • 0015976680 scopus 로고
    • Metal(II) ion catalyzed transphosphorylation of four homodinucleotides and five pairs of dinucleotide sequence isomers
    • Ikenaga H, Inoue Y (1974) Metal(II) ion catalyzed transphosphorylation of four homodinucleotides and five pairs of dinucleotide sequence isomers. Biochemistry 13:577-582
    • (1974) Biochemistry , vol.13 , pp. 577-582
    • Ikenaga, H.1    Inoue, Y.2
  • 31
    • 0029856642 scopus 로고    scopus 로고
    • Efficient improvement of hammerhead ribozyme mediated cleavage of long substrates by oligonucleotide facilitators
    • Jankowsky E, Schwenzer B (1996) Efficient improvement of hammerhead ribozyme mediated cleavage of long substrates by oligonucleotide facilitators. Biochemistry 35:15313-15321
    • (1996) Biochemistry , vol.35 , pp. 15313-15321
    • Jankowsky, E.1    Schwenzer, B.2
  • 33
    • 0000046599 scopus 로고    scopus 로고
    • Reactions Catalyzed by RNA and DNA enzymes
    • 2nd ed. Gesteland RF, Cech TR, Atkins JF (eds) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
    • Joyce GF (1999) Reactions Catalyzed by RNA and DNA enzymes, 2nd ed. In: Gesteland RF, Cech TR, Atkins JF (eds) The RNA world. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, pp 687-689
    • (1999) The RNA World , pp. 687-689
    • Joyce, G.F.1
  • 34
    • 3042732096 scopus 로고    scopus 로고
    • Directed evolution of nucleic acid enzymes
    • Joyce GF (2004) Directed evolution of nucleic acid enzymes. Annu Rev Biochem 73:791-836
    • (2004) Annu Rev Biochem , vol.73 , pp. 791-836
    • Joyce, G.F.1
  • 35
    • 0032842642 scopus 로고    scopus 로고
    • In vitro selection of RNAs with increased teriary structural stability
    • Juneau K, Cech TR (1999) In vitro selection of RNAs with increased teriary structural stability. RNA 5:1119-1129
    • (1999) RNA , vol.5 , pp. 1119-1129
    • Juneau, K.1    Cech, T.R.2
  • 36
    • 0037079676 scopus 로고    scopus 로고
    • The reactivity of phosphodiester bonds within linear single-stranded oligoribonucleotides is strongly dependent on the base sequence
    • Kaukinen U, Lyytikainen S, Mikkola S, Lonnberg H (2002) The reactivity of phosphodiester bonds within linear single-stranded oligoribonucleotides is strongly dependent on the base sequence. Nucleic Acids Res 30:468-474
    • (2002) Nucleic Acids Res , vol.30 , pp. 468-474
    • Kaukinen, U.1    Lyytikainen, S.2    Mikkola, S.3    Lonnberg, H.4
  • 38
    • 0043009734 scopus 로고    scopus 로고
    • Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity
    • Khvorova A, Lescoute A, Westhof E, Jayasena SD (2003) Sequence elements outside the hammerhead ribozyme catalytic core enable intracellular activity. Nature Struct Biol 10:708-712
    • (2003) Nature Struct Biol , vol.10 , pp. 708-712
    • Khvorova, A.1    Lescoute, A.2    Westhof, E.3    Jayasena, S.D.4
  • 39
    • 0028272470 scopus 로고
    • The role of modification in stabilization of transfer RNA from hyerthermophiles
    • Kowalak JA, Dalluge JJ, McCloskey JA, Stetter KO (1994) The role of modification in stabilization of transfer RNA from hyerthermophiles. Biochemistry 33:7869-7876
    • (1994) Biochemistry , vol.33 , pp. 7869-7876
    • Kowalak, J.A.1    Dalluge, J.J.2    McCloskey, J.A.3    Stetter, K.O.4
  • 40
    • 84985444005 scopus 로고
    • Metal ions that promote the hydrolysis of nucleoside phosphoesters do not enhance intramolecular phosphate migration
    • Kuusela S, Lonnberg H (1993) Metal ions that promote the hydrolysis of nucleoside phosphoesters do not enhance intramolecular phosphate migration. J Phys Org Chem 6:347-356
    • (1993) J Phys Org Chem , vol.6 , pp. 347-356
    • Kuusela, S.1    Lonnberg, H.2
  • 41
    • 0034715471 scopus 로고    scopus 로고
    • A highly sensitive and selective catalytic DNA biosensor for lead ions
    • Li J, Lu Y (2000) A highly sensitive and selective catalytic DNA biosensor for lead ions. J Am Chem Soc 122:10466-10467
    • (2000) J Am Chem Soc , vol.122 , pp. 10466-10467
    • Li, J.1    Lu, Y.2
  • 42
    • 0034650291 scopus 로고    scopus 로고
    • In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme
    • Li J, Zheng W, Kwon AH, Lu Y (2000) In vitro selection and characterization of a highly efficient Zn(II)-dependent RNA-cleaving deoxyribozyme. Nucleic Acids Res. 28:481-488
    • (2000) Nucleic Acids Res , vol.28 , pp. 481-488
    • Li, J.1    Zheng, W.2    Kwon, A.H.3    Lu, Y.4
  • 43
    • 0033150946 scopus 로고    scopus 로고
    • Deoxyribozymes: New players in the ancient game of biocatalysis
    • Li Y, Breaker RR (1999a) Deoxyribozymes: new players in the ancient game of biocatalysis. Curr Opin Struc Biol 9:315-323
    • (1999) Curr Opin Struc Biol , vol.9 , pp. 315-323
    • Li, Y.1    Breaker, R.R.2
  • 44
    • 0033575087 scopus 로고    scopus 로고
    • Kinetics of RNA degradation by specific base catalysis of transesterification involving the 2′-hydroxyl group
    • Li Y, Breaker RR (1999b) Kinetics of RNA degradation by specific base catalysis of transesterification involving the 2′-hydroxyl group. J Am Chem Soc 121:5364-5372
    • (1999) J Am Chem Soc , vol.121 , pp. 5364-5372
    • Li, Y.1    Breaker, R.R.2
  • 45
    • 0038209225 scopus 로고    scopus 로고
    • A colorimetric lead biosensor using DNAzyme-directed assembly of gold nanoparticles
    • Liu J, Lu Y (2003a) A colorimetric lead biosensor using DNAzyme-directed assembly of gold nanoparticles. J Am Chem Soc 125:6642-6643
    • (2003) J Am Chem Soc , vol.125 , pp. 6642-6643
    • Liu, J.1    Lu, Y.2
  • 46
    • 0345168177 scopus 로고    scopus 로고
    • Improving fluorescent DNAzyme biosensors by combining inter- and intramolecular quenchers
    • Liu J, Lu Y (2003b) Improving fluorescent DNAzyme biosensors by combining inter- and intramolecular quenchers. Anal Chem 75:6666-6672
    • (2003) Anal Chem , vol.75 , pp. 6666-6672
    • Liu, J.1    Lu, Y.2
  • 47
    • 1542408632 scopus 로고    scopus 로고
    • Adenosine-dependent assembly of aptazyme-functionalized gold nanoparticles and its application as a colorimetric biosensor
    • Liu J, Lu Y (2004a) Adenosine-dependent assembly of aptazyme- functionalized gold nanoparticles and its application as a colorimetric biosensor. Anal Chem 76:1627-1632
    • (2004) Anal Chem , vol.76 , pp. 1627-1632
    • Liu, J.1    Lu, Y.2
  • 48
    • 3042737151 scopus 로고    scopus 로고
    • Colorimetric biosensor based on DNAzyme-assembled gold nanoparticles
    • Liu J, Lu Y (2004b) Colorimetric biosensor based on DNAzyme-assembled gold nanoparticles. J Fluoresc 14:343-354
    • (2004) J Fluoresc , vol.14 , pp. 343-354
    • Liu, J.1    Lu, Y.2
  • 49
    • 0037131433 scopus 로고    scopus 로고
    • New transition metal-dependent DNAzymes as efficient endonucleases and as selective metal biosensors
    • Lu Y (2002) New transition metal-dependent DNAzymes as efficient endonucleases and as selective metal biosensors. Chem Eur J 8:4588-4596
    • (2002) Chem Eur J , vol.8 , pp. 4588-4596
    • Lu, Y.1
  • 51
    • 0002833542 scopus 로고
    • Nucleoside sites for transition metal ion binding
    • Martin RB (1985) Nucleoside sites for transition metal ion binding. Accounts Chem Res 18:32-38
    • (1985) Accounts Chem Res , vol.18 , pp. 32-38
    • Martin, R.B.1
  • 52
    • 0035890653 scopus 로고    scopus 로고
    • Post-transcriptional modification in archaeal tRNAs: Identities and phylogenetic relations of nucleotides from mesophilic and hyperthermophilic Methanococcales
    • McCloskey JA, Graham DE, Zhou S, Crain PF, Ibba M, Konisky J, Soll D, Olsen GJ (2001) Post-transcriptional modification in archaeal tRNAs: identities and phylogenetic relations of nucleotides from mesophilic and hyperthermophilic Methanococcales. Nucleic Acids Res 29:4699-4706
    • (2001) Nucleic Acids Res , vol.29 , pp. 4699-4706
    • McCloskey, J.A.1    Graham, D.E.2    Zhou, S.3    Crain, P.F.4    Ibba, M.5    Konisky, J.6    Soll, D.7    Olsen, G.J.8
  • 53
    • 0037438394 scopus 로고    scopus 로고
    • An efficient RNA-cleaving DNA enzyme that synchronizes catalysis with flurorescence signaling
    • Mei SHJ, Liu Z, Brennan JD, Li Y (2003) An efficient RNA-cleaving DNA enzyme that synchronizes catalysis with flurorescence signaling. J Am Chem Soc 125:412-420
    • (2003) J Am Chem Soc , vol.125 , pp. 412-420
    • Mei, S.H.J.1    Liu, Z.2    Brennan, J.D.3    Li, Y.4
  • 55
    • 0347064295 scopus 로고    scopus 로고
    • Folding of a stable DNA motif involves a highly cooperative network of interactions
    • Moody EM, Bevilacqua PC (2003a) Folding of a stable DNA motif involves a highly cooperative network of interactions. J Am Chem Sol 125:16285-16293
    • (2003) J Am Chem Sol , vol.125 , pp. 16285-16293
    • Moody, E.M.1    Bevilacqua, P.C.2
  • 56
    • 0037467110 scopus 로고    scopus 로고
    • Thermodynamic coupling of the loop and stem in unusually stable DNA hairpins closed by CG base pairs
    • Moody EM, Bevilacqua PC (2003b) Thermodynamic coupling of the loop and stem in unusually stable DNA hairpins closed by CG base pairs. J Am Chem Soc 125:2032-2033
    • (2003) J Am Chem Soc , vol.125 , pp. 2032-2033
    • Moody, E.M.1    Bevilacqua, P.C.2
  • 57
    • 0037015994 scopus 로고    scopus 로고
    • Selection for thermodynamically stable DNA tetraloops using temperature gradient gel electrophoresis reveals four motifs: D(cGNNAg), d(cGNABg), d(cCNNGg), and d(gCNNGc)
    • Nakano M, Moody EM, Liang J, Bevilacqua PC (2002) Selection for thermodynamically stable DNA tetraloops using temperature gradient gel electrophoresis reveals four motifs: d(cGNNAg), d(cGNABg), d(cCNNGg), and d(gCNNGc). Biochemistry 41:14281-14292
    • (2002) Biochemistry , vol.41 , pp. 14281-14292
    • Nakano, M.1    Moody, E.M.2    Liang, J.3    Bevilacqua, P.C.4
  • 58
    • 0141814674 scopus 로고    scopus 로고
    • Active self-splicing group I introns in 23S rRNA genes of hyperthermophilic bacteria, derived from introns in eukaryotic organelles
    • Nesbø CL, Doolittle WF (2003) Active self-splicing group I introns in 23S rRNA genes of hyperthermophilic bacteria, derived from introns in eukaryotic organelles. Proc Natl Acad Sci USA 100:10806-10811
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 10806-10811
    • Nesbø, C.L.1    Doolittle, W.F.2
  • 59
    • 2342421271 scopus 로고    scopus 로고
    • Structure-switching signaling aptamers: Transducing molecular recognition into fluorescence signaling
    • Nutiu R, Li Y (2004) Structure-switching signaling aptamers: Transducing molecular recognition into fluorescence signaling. Chem Eur J 10:1868-1876
    • (2004) Chem Eur J , vol.10 , pp. 1868-1876
    • Nutiu, R.1    Li, Y.2
  • 60
    • 12844269766 scopus 로고    scopus 로고
    • Characterization of a native hammerhead ribozyme derived from schistosomes
    • Osborne EM, Schaak JE, Derose VJ (2005) Characterization of a native hammerhead ribozyme derived from schistosomes. RNA 11:187-196
    • (2005) RNA , vol.11 , pp. 187-196
    • Osborne, E.M.1    Schaak, J.E.2    Derose, V.J.3
  • 61
    • 0031102380 scopus 로고    scopus 로고
    • Nucleic acid selection and the challenge of combinatorial chemistry
    • Osborne SE, Ellington AD (1997) Nucleic acid selection and the challenge of combinatorial chemistry. Chem Rev 97:349-370
    • (1997) Chem Rev , vol.97 , pp. 349-370
    • Osborne, S.E.1    Ellington, A.D.2
  • 62
    • 0035865874 scopus 로고    scopus 로고
    • Characterization of RNase P from Thermotoga maritima
    • Paul R, Lazarev D, Altman S (2001) Characterization of RNase P from Thermotoga maritima. Nucleic Acids Res 29:880-885
    • (2001) Nucleic Acids Res , vol.29 , pp. 880-885
    • Paul, R.1    Lazarev, D.2    Altman, S.3
  • 63
    • 0033565629 scopus 로고    scopus 로고
    • Origins of the temperature dependence of hammerhead ribozyme catalysis
    • Peracchi A (1999) Origins of the temperature dependence of hammerhead ribozyme catalysis. Nucleic Acids Res 27:2875-2882
    • (1999) Nucleic Acids Res , vol.27 , pp. 2875-2882
    • Peracchi, A.1
  • 64
    • 9344265166 scopus 로고    scopus 로고
    • Artificial tertiary motifs stabilize transcleaving hammerhead ribozymes under conditions of submillimolar divalent ions and high temperatures
    • Saksmerprome V, Roychowdhury-saha M, Jayasena S, Khvorova A, Burke DH (2004) Artificial tertiary motifs stabilize transcleaving hammerhead ribozymes under conditions of submillimolar divalent ions and high temperatures. RNA 10:1916-1924
    • (2004) RNA , vol.10 , pp. 1916-1924
    • Saksmerprome, V.1    Roychowdhury-saha, M.2    Jayasena, S.3    Khvorova, A.4    Burke, D.H.5
  • 66
    • 0029864395 scopus 로고    scopus 로고
    • Influence of substrate structure on cleavage by hammerhead ribozyme
    • Scarabino D, Tocchini-Valentini GP (1996) Influence of substrate structure on cleavage by hammerhead ribozyme. FEBS Lett 383:185-190
    • (1996) FEBS Lett , vol.383 , pp. 185-190
    • Scarabino, D.1    Tocchini-Valentini, G.P.2
  • 68
    • 0032831634 scopus 로고    scopus 로고
    • Relationship between internucleotide linkage geometry and the stability of RNA
    • Soukup GA, Breaker RR (1999) Relationship between internucleotide linkage geometry and the stability of RNA. RNA 5:1308-1325
    • (1999) RNA , vol.5 , pp. 1308-1325
    • Soukup, G.A.1    Breaker, R.R.2
  • 70
    • 0028942751 scopus 로고
    • Temperatures-dependent change in the rate-determining step in a reaction catalyzed a hammerhead ribozyme
    • Takagi Y, Taira K (1995) Temperatures-dependent change in the rate-determining step in a reaction catalyzed a hammerhead ribozyme. FEBS Lett 361:273-276
    • (1995) FEBS Lett , vol.361 , pp. 273-276
    • Takagi, Y.1    Taira, K.2
  • 71
    • 0029805902 scopus 로고    scopus 로고
    • Ile of the purple bacterium Azoarcus
    • Ile of the purple bacterium Azoarcus. RNA 2:72-83
    • (1996) RNA , vol.2 , pp. 72-83
    • Tanner, M.A.1    Cech, T.R.2
  • 72
    • 0035098779 scopus 로고    scopus 로고
    • Hyperthermophilic enzymes: Sources, uses, and molecular mechanisms for thermostability
    • Vieille C, Zeikus GJ (2001) Hyperthermophilic enzymes: Sources, uses, and molecular mechanisms for thermostability. Microbiol Mol Biol Rev 65:1-43
    • (2001) Microbiol Mol Biol Rev , vol.65 , pp. 1-43
    • Vieille, C.1    Zeikus, G.J.2
  • 73
    • 0036235747 scopus 로고    scopus 로고
    • Sequence diversity, metal specificity, and catalytic proficiency of metal-dependent phosphorylating DNA enzymes
    • Wang W, Billen LP, Li Y (2002) Sequence diversity, metal specificity, and catalytic proficiency of metal-dependent phosphorylating DNA enzymes. Chem Biol 9:507-517
    • (2002) Chem Biol , vol.9 , pp. 507-517
    • Wang, W.1    Billen, L.P.2    Li, Y.3
  • 74
    • 0028856036 scopus 로고
    • PCR product with strands of unequal length
    • Williams KP, Bartel DP (1995) PCR product with strands of unequal length. Nucleic Acids Res 23:4220-4221
    • (1995) Nucleic Acids Res , vol.23 , pp. 4220-4221
    • Williams, K.P.1    Bartel, D.P.2
  • 75
    • 0032853242 scopus 로고    scopus 로고
    • In vitro selection of functional nucleic acids
    • Wilson DS, Szostak JW (1999) In vitro selection of functional nucleic acids. Annu Rev Biochem 68:611-647
    • (1999) Annu Rev Biochem , vol.68 , pp. 611-647
    • Wilson, D.S.1    Szostak, J.W.2
  • 76
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31:3406-3415
    • (2003) Nucleic Acids Res , vol.31 , pp. 3406-3415
    • Zuker, M.1


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