Similar gene expression patterns characterize aging and oxidative stress in Drosophila melanogaster

Proceedings of the National Academy of Sciences of the United States of America

Volumn 101, Issue 20, 2004, Pages 7663-7668

  Landis, Gary N ^a   Abdueva, Diana ^a   Skvortsov, Dmitriy ^a   Yang, Junsheng ^a   Rabin, Beth E ^a   Carrick, James ^a   Tavaré, Simon ^a,b   Tower, John ^a  

^a UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^b UNIVERSITY OF CAMBRIDGE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIOXIDANT; HEAT SHOCK PROTEIN; RNA;

AGING; ALGORITHM; ARTICLE; BIOLOGICAL MONITORING; DATA ANALYSIS; DROSOPHILA MELANOGASTER; GENE EXPRESSION; IMMUNE RESPONSE; MEASUREMENT; NONHUMAN; OXIDATIVE STRESS; PRIORITY JOURNAL; PROMOTER REGION; PURINE SYNTHESIS; STATISTICAL ANALYSIS; TRANSGENICS;

AGING; ANIMALS; BLOTTING, NORTHERN; DROSOPHILA MELANOGASTER; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENES, REPORTER; HEAT; LONGEVITY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; OXIDATIVE STRESS; OXYGEN;

DROSOPHILA MELANOGASTER; MELANOGASTER;

EID: 2442719045     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0307605101     Document Type: Article

References (51)

1. Finkel, T. & Holbrook, N. J. (2000) Nature 408, 239-247.
2. Harman, D. J. (1956) J. Gerontol. 11, 298-300.
3. Hekimi, S. & Guarente, L. (2003) Science 299, 1351-1354.
4. Sun, J. & Tower, J. (1999) Mol. Cell. Biol. 19, 216-228.
5. Parkes, T. L., Elia, A. J., Dickson, D., Hilliker, A. J., Phillips, J. P. & Boulianne, G. L. (1998) Nat. Genet. 19, 171-174.
6. Sun, J., Folk, D., Bradley, T. J. & Tower, J. (2002) Genetics 161, 661-672.
7. Migliaccio, E., Giorgio, M., Mele, S., Pelicci, G., Reboldi, P., Pandolfi, P. P., Lanfrancone, L. & Pelicci, P. G. (1999) Nature 402, 309-313.
8. Larsen, P. L. (1993) Proc. Natl. Acad. Sci. USA 90, 8905-8909.
9. Tatar, M., Bartke, A. & Antebi, A. (2003) Science 299, 1346-1351.
10. Lin, Y.-J., Seroude, L. & Benzer, S. (1998) Science 282, 943-946.
11. Zou, S., Meadows, S., Sharp, L., Jan, L. Y. & Jan, Y. N. (2000) Proc. Natl. Acad. Sci. USA 97, 13726-13731.
12. Scandalios, J. G. (2002) Genome Biol 3, REVIEWS1019.
13. Lipshutz, R. J., Fodor, S. P., Gingeras, T. R. & Lockhart, D. J. (1999) Nat. Genet. 21, 20-24.
14. Hekstra, D., Taussig, A. R., Magnasco, M. & Naef, F. (2003) Nucleic Acids Res. 31, 1962-1968.
15. Forman, J. E., Walton, I. D., Stern, D., Rava, R. P. & Trulson, M. O. (1998) Am. Chem. Soc. Symp. Ser. 682, 206-228.
16. SantaLucia, J., Jr. (1998) Proc. Natl. Acad. Sci. USA 95, 1460-1465.
17. Bolstad, B. M., Irizarry, R. A., Astrand, M. & Speed, T. P. (2003) Bioinformatics 19, 185-193.
18. Dudoit, S., Gentleman, R. C. & Quackenbush, J. (2003) BioTechniques Suppl., 45-51.
19. Li, C. & Hung Wong, W. (2001) Genome Biol. 2, RESEARCH0032.
20. Irizarry, R. A., Hobbs, B., Collin, F., Beazer-Barclay, Y. D., Antonellis, K. J., Scherf, U. & Speed, T. P. (2003) Biostatistics 4, 249-264.
21. Tusher, V. G., Tibshirani, R. & Chu, G. (2001) Proc. Natl. Acad. Sci. USA 98, 5116-5121.
22. Bus, J. S., Cagen, S. Z., Olgaard, M. & Gibson, J. E. (1976) Toxicol. Appl. Pharmacol. 35, 501-513.
23. Richmond, R. & Halliwell, B. (1982) J. Inorg. Biochem. 17, 95-107.
24. Naef, F., Lim, D. A., Patil, N. & Magnasco, M. (2002) Phys. Rev. E Stat. Nonlin. Soft. Matter Phys. 65, 040902, 1-4.
25. King, V. & Tower, J. (1999) Dev. Biol. 207, 107-118.
26. Kurapati, R., Passananti, H. B., Rose, M. R. & Tower, J. (2000) J. Gerontol. 55, B1-B8.
27. Wheeler, J. C., Bieschke, E. T. & Tower, J. (1995) Proc. Natl. Acad. Sci. USA 92, 10408-10412.
28. Wheeler, J. C., King, V. & Tower, J. (1999) Neurobiol. Aging 20, 545-553.
29. Pletcher, S. D., Macdonald, S. J., Marguerie, R., Certa, U., Stearns, S. C., Goldstein, D. B. & Partridge, L. (2002) Curr. Biol. 12, 712-723.
30. Seroude, L., Brummel, T., Kapahi, P. & Benzer, S. (2002) Aging Cell 1, 47-56.
31. Hilliker, A. J., Duyf, B., Evans, D. & Phillips, J. P. (1992) Proc. Natl. Acad. Sci. USA 89, 4343-4347.
32. Anderson, R. M., Bitterman, K. J., Wood, J. G., Medvedik, O. & Sinclair, D. A. (2003) Nature 423, 181-185.
33. Gupta, T. & Schupbach, T. (2003) Development (Cambridge, U.K.) 130, 6075-6087.
34. Drobnies, A. E., van Der Ende, B., Thewalt, J. L. & Cornell, R. B. (1999) Biochemistry 38, 15606-15614.
35. Landis, G. N., Bhole, D. & Tower, J. (2003) Genome Biol. 4, R8; 1-14.
36. Lund, J., Tedesco, P., Duke, K., Wang, J., Kim, S. K. & Johnson, T. E. (2002) Curr. Biol. 12, 1566-1573.
37. Lee, C.-K., Klopp, R. G., Weindruch, R. & Prolla, T. A. (1999) Science 285, 1390-1393.
38. Lee, C. K., Weindruch, R. & Prolla, T. A. (2000) Nat. Genet. 25, 294-297.
39. Ly, D. H., Lockhart, D. J., Lerner, R. A. & Schultz, P. G. (2000) Science 287, 2486-2492.
40. Calleja, M., Pena, P., Ugalde, C., Ferreiro, C., Marco, R. & Garesse, R. (1993) J. Biol. Chem. 298, 18891-18897.
41. Fleming, J. E., Melnikoff, P. S., Latter, G. I., Chandra, D. & Bensch, K. G. (1986) Mech. Ageing Dev. 34, 63-72.
42. Yui, R., Ohno, Y. & Matsuura, E. T. (2003) Genes Genet. Syst. 78, 245-251.
43. Tzou, P., Ohresser, S., Ferrandon, D., Capovilla, M., Reichhart, J. M., Lemaitre, B., Hoffmann, J. A. & Imler, J. L. (2000) Immunity 13, 737-748.
44. De Gregorio, E., Spellman, P. T., Rubin, G. M. & Lemaitre, B. (2001) Proc. Natl. Acad. Sci. USA 98, 12590-12595.
45. Kim, Y. S., Nam, H. J., Chung, H. Y., Kim, N. D., Ryu, J. H., Lee, W. J., Arking, R. & Yoo, M. A. (2001) J. Am. Aging Assoc. 24, 187-194.
46. Garsin, D. A., Villanueva, J. M., Begun, J., Kim, D. H., Sifri, C. D., Calderwood, S. B., Ruvkun, G. & Ausubel, F. M. (2003) Science 300, 1921.
47. Murphy, C. T., McCarroll, S. A., Bargmann, C. I., Fraser, A., Kamath, R. S., Ahringer, J., Li, H. & Kenyon, C. (2003) Nature 424, 277-283.
48. Garigan, D., Hsu, A. L., Fraser, A. G., Kamath, R. S., Ahringer, J. & Kenyon, C. (2002) Genetics 161, 1101-1112.
49. Vabulas, R. M., Wagner, H. & Schild, H. (2002) Curr. Top. Microbiol. Immunol. 270, 169-184.
50. Asea, A., Rehli, M., Kabingu, E., Boch, J. A., Bare, O., Auron, P. E., Stevenson, M. A. & Calderwood, S. K. (2002) J. Biol. Chem. 277, 15028-15034.
51. Kim, H. J., Jung, K. J., Yu, B. P., Cho, C. G., Choi, J. S. & Chung, H. Y. (2002) Mech. Ageing Dev. 123, 1589-1595.