-
2
-
-
33645495829
-
Data Mining for Bioinformatics
-
Yi-Ping Phoebe Chen Springer
-
A.W.C. Liew, H. Yan, and M. Yang Data Mining for Bioinformatics Yi-Ping Phoebe Chen Bioinformatics Technologies 2005 Springer 63 116 (Chapter 4)
-
(2005)
Bioinformatics Technologies
, pp. 63-116
-
-
Liew, A.W.C.1
Yan, H.2
Yang, M.3
-
4
-
-
0014757386
-
A general method applicable to the search for similarities in the amino acid sequence of two proteins
-
S.B. Needleman, and C.D. Wunsch A general method applicable to the search for similarities in the amino acid sequence of two proteins J. Mol. Biol. 48 1970 443 453
-
(1970)
J. Mol. Biol.
, vol.48
, pp. 443-453
-
-
Needleman, S.B.1
Wunsch, C.D.2
-
5
-
-
0019887799
-
Identification of common molecular subsequences
-
T.F. Smith, and M.S. Waterman Identification of common molecular subsequences J. Mol. Biol. 147 1981 195 197
-
(1981)
J. Mol. Biol.
, vol.147
, pp. 195-197
-
-
Smith, T.F.1
Waterman, M.S.2
-
7
-
-
0025183708
-
Basic local alignment search tool
-
S.F. Altschul, W. Gish, W. Miller, E.W. Myers, and D.J. Lipman Basic local alignment search tool J. Mol. Biol. 215 1990 403 410
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
8
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
S.F. Altschul, T.L. Madden, A.A. Schaffer, J. Zhang, Z. Zhang, W. Miller, and D.J. lipman Gapped BLAST and PSI-BLAST a new generation of protein database search programs Nucl. Acids Res. 25 1997 3398 3402
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 3398-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
9
-
-
0037413312
-
DB-Curve: A novel 2D method of DNA sequence visualization and representation
-
Y. Wu, A.W.C. Liew, H. Yan, and M. Yang DB-Curve a novel 2D method of DNA sequence visualization and representation Chem. Phys. Lett. 367 2003 170 176
-
(2003)
Chem. Phys. Lett.
, vol.367
, pp. 170-176
-
-
Wu, Y.1
Liew, A.W.C.2
Yan, H.3
Yang, M.4
-
11
-
-
34547705020
-
Visualization and comparison of DNA sequences by use of three-dimensional trajectories
-
February Adelaide, Australia
-
H.T. Chang, N.W. Lo, W.C. Lu, C.J. Kuo, Visualization and comparison of DNA sequences by use of three-dimensional trajectories, Proceedings of the First Asia-Pacific Bioinformatics Conference APBC2003, February 2003, Adelaide, Australia.
-
(2003)
Proceedings of the First Asia-Pacific Bioinformatics Conference APBC2003
-
-
Chang, H.T.1
Lo, N.W.2
Lu, W.C.3
Kuo, C.J.4
-
12
-
-
0025761984
-
Fast Fourier transform-based correlation of DNA sequences using complex plane encoding
-
E.A. Cheever, G.C. Overton, and D.B. Searls Fast Fourier transform-based correlation of DNA sequences using complex plane encoding Comput. Appl. Biosci. 7 2 1991 143 154
-
(1991)
Comput. Appl. Biosci.
, vol.7
, Issue.2
, pp. 143-154
-
-
Cheever, E.A.1
Overton, G.C.2
Searls, D.B.3
-
13
-
-
84960358202
-
Preliminary wavelet analysis of genomic sequences
-
August Stanford, CA, USA
-
J. Ning, C.N. Moore, J.C. Nelson, Preliminary wavelet analysis of genomic sequences, Proceedings of the Second IEEE Computer Society Bioinformatics Conference CSB2003, August 2003, Stanford, CA, USA, pp. 509-510.
-
(2003)
Proceedings of the Second IEEE Computer Society Bioinformatics Conference CSB2003
, pp. 509-510
-
-
Ning, J.1
Moore, C.N.2
Nelson, J.C.3
-
14
-
-
84962467604
-
Wavelet profiles: Their application in Oryza sativa DNA sequence analysis
-
August Stanford, CA, USA
-
N. Kawagashira, Y. Ohtomo, K. Murakami, K. Matsubara, J. Kawai, P. Carninci, Y. Hayashizaki, S. Kikuchi, Wavelet profiles: their application in Oryza sativa DNA sequence analysis, Proceedings of the First IEEE Computer Society Bioinformatics Conference CSB2002, August 2002, Stanford, CA, USA, pp. 343-344.
-
(2002)
Proceedings of the First IEEE Computer Society Bioinformatics Conference CSB2002
, pp. 343-344
-
-
Kawagashira, N.1
Ohtomo, Y.2
Murakami, K.3
Matsubara, K.4
Kawai, J.5
Carninci, P.6
Hayashizaki, Y.7
Kikuchi, S.8
-
15
-
-
0036796369
-
Current methods of gene prediction, their strengths and weakness - Survey and summary
-
C. Mathe, M.F. Sagot, T. Schiex, and P. Rouze Current methods of gene prediction, their strengths and weakness - survey and summary Nucl. Acids Res. 30 2002 4103 4117
-
(2002)
Nucl. Acids Res.
, vol.30
, pp. 4103-4117
-
-
Mathe, C.1
Sagot, M.F.2
Schiex, T.3
Rouze, P.4
-
16
-
-
0027059264
-
Assessment of protein coding measures
-
J.W. Fickett, and C.S. Tung Assessment of protein coding measures Nucl. Acids Res. 20 1992 64412 64450
-
(1992)
Nucl. Acids Res.
, vol.20
, pp. 64412-64450
-
-
Fickett, J.W.1
Tung, C.S.2
-
17
-
-
0030218799
-
Finding genes by computer: The state of the art
-
J.W. Fickett Finding genes by computer the state of the art Trends Genet. 12 1996 316 320
-
(1996)
Trends Genet.
, vol.12
, pp. 316-320
-
-
Fickett, J.W.1
-
18
-
-
0030585734
-
Evaluation of gene structure prediction programs
-
M. Burset, and R. Guigo Evaluation of gene structure prediction programs Genomics 34 1996 353 367
-
(1996)
Genomics
, vol.34
, pp. 353-367
-
-
Burset, M.1
Guigo, R.2
-
19
-
-
0002345468
-
DNA composition, codon usage and exon prediction
-
M.J. Bishop Academic Press
-
R. Guigo DNA composition, codon usage and exon prediction M.J. Bishop Genetic Databases 1999 Academic Press 53 80 (Chapter 4)
-
(1999)
Genetic Databases
, pp. 53-80
-
-
Guigo, R.1
-
20
-
-
84929026405
-
Classification of short human exons and introns based on statistical features
-
Y. Wu, A.W.C. Liew, H. Yan, and M. Yang Classification of short human exons and introns based on statistical features Phys. Rev. E 67 6 2003 Art. No. 061916
-
(2003)
Phys. Rev. e
, vol.67
, Issue.6
-
-
Wu, Y.1
Liew, A.W.C.2
Yan, H.3
Yang, M.4
-
21
-
-
10044287193
-
Selection of statistical features based on mutual information for classification of human coding and non-coding DNA sequences
-
Cambridge, United Kingdom, 23-26 August
-
A.W.C. Liew, Y. Wu, H. Yan, Selection of Statistical Features Based on Mutual Information for Classification of Human Coding and Non-coding DNA Sequences, Proceedings of the 17th International Conference on Pattern Recognition, Cambridge, United Kingdom, 23-26 August 2004.
-
(2004)
Proceedings of the 17th International Conference on Pattern Recognition
-
-
Liew, A.W.C.1
Wu, Y.2
Yan, H.3
-
22
-
-
34249308376
-
Effective statistical features for coding and non-coding DNA sequence classification for yeast
-
C. elegans and Human to appear
-
A.W.C. Liew, Y. Wu, H. Yan, M. Yang, Effective statistical features for coding and non-coding DNA sequence classification for yeast, C. elegans and Human, International Journal of Bioinformatics and Application, to appear.
-
International Journal of Bioinformatics and Application
-
-
Liew, A.W.C.1
Wu, Y.2
Yan, H.3
Yang, M.4
-
23
-
-
0023685544
-
A survey on intron and exon lengths
-
J.D. Hawkins A survey on intron and exon lengths Nucl. Acids Res. 16 1988 9893 9908
-
(1988)
Nucl. Acids Res.
, vol.16
, pp. 9893-9908
-
-
Hawkins, J.D.1
-
24
-
-
0034662286
-
Recognition of protein coding genes in the Yeast genome at better than 95% accuracy based on the Z curve
-
C.T. Zhang, and J. Wang Recognition of protein coding genes in the Yeast genome at better than 95% accuracy based on the Z curve Nucl. Acids Res. 28 2000 2804 2814
-
(2000)
Nucl. Acids Res.
, vol.28
, pp. 2804-2814
-
-
Zhang, C.T.1
Wang, J.2
-
26
-
-
0034491149
-
Frequency-domain analysis of biomolecular sequences
-
D. Anastassiou Frequency-domain analysis of biomolecular sequences Bioinformatics 6 12 2000 1073 1082
-
(2000)
Bioinformatics
, vol.6
, Issue.12
, pp. 1073-1082
-
-
Anastassiou, D.1
-
27
-
-
0031010292
-
Prediction of probable genes by Fourier analysis of genomic sequences
-
S. Tiwari, S. Ramachandran, A. Bhattacharya, S. Bhattacharya, and R. Ramaswamy Prediction of probable genes by Fourier analysis of genomic sequences Comput. Appl. Biosci. 13 1997 263 270
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 263-270
-
-
Tiwari, S.1
Ramachandran, S.2
Bhattacharya, A.3
Bhattacharya, S.4
Ramaswamy, R.5
-
29
-
-
0142214212
-
Signal processing techniques in genomic engineering
-
X.Y. Zhang, F. Chen, Y.T. Zhang, S.C. Agner, M. Akay, Z.H. Lu, M.M.Y. Waye, and S.K.W. Tsui Signal processing techniques in genomic engineering Proc. IEEE 9 12 2002 1822 1833
-
(2002)
Proc. IEEE
, vol.9
, Issue.12
, pp. 1822-1833
-
-
Zhang, X.Y.1
Chen, F.2
Zhang, Y.T.3
Agner, S.C.4
Akay, M.5
Lu, Z.H.6
Waye, M.M.Y.7
Tsui, S.K.W.8
-
31
-
-
0030863002
-
Eukaryotic promoter recognition
-
J.W. Fickett, and A.G. Hatzigeorgiou Eukaryotic promoter recognition Genome Res. 7 9 1997 861 878
-
(1997)
Genome Res.
, vol.7
, Issue.9
, pp. 861-878
-
-
Fickett, J.W.1
Hatzigeorgiou, A.G.2
-
32
-
-
0032776529
-
Models for prediction and recognition of eukaryotic promoters
-
T. Werner Models for prediction and recognition of eukaryotic promoters Mammalian Genome 10 2 1999 168 175
-
(1999)
Mammalian Genome
, vol.10
, Issue.2
, pp. 168-175
-
-
Werner, T.1
-
33
-
-
0035002807
-
Evaluation of gene-finding programs on mammalian sequences
-
S. Rogic, A.K. Mackworth, and F.B.F. Ouellette Evaluation of gene-finding programs on mammalian sequences Genome Res. 11 5 2001 817 832
-
(2001)
Genome Res.
, vol.11
, Issue.5
, pp. 817-832
-
-
Rogic, S.1
MacKworth, A.K.2
Ouellette, F.B.F.3
-
35
-
-
0031010292
-
Prediction of probable genes by Fourier analysis of genomic sequences
-
S. Tiwari, S. Ramachandran, A. Bhattacharya, S. Bhattacharya, and R. Ramaswamy Prediction of probable genes by Fourier analysis of genomic sequences Comput. Appl. Biosci. 13 1997 263 270
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 263-270
-
-
Tiwari, S.1
Ramachandran, S.2
Bhattacharya, A.3
Bhattacharya, S.4
Ramaswamy, R.5
-
37
-
-
0032519353
-
GeneMark.hmm: New solutions for gene finding
-
A.V. Lukashin, and M. Borodovsky GeneMark.hmm new solutions for gene finding Nucl. Acids Res. 26 1998 1107 1115
-
(1998)
Nucl. Acids Res.
, vol.26
, pp. 1107-1115
-
-
Lukashin, A.V.1
Borodovsky, M.2
-
38
-
-
0031027525
-
Identification of protein coding regions in the human genome by quadratic discriminant analysis
-
M.Q. Zhang Identification of protein coding regions in the human genome by quadratic discriminant analysis Proc. Natl. Acad. Sci. USA 94 1997 565 568
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 565-568
-
-
Zhang, M.Q.1
-
40
-
-
0038341719
-
A low number wins the GeneSweep pool
-
Elizabeth Pennisi A low number wins the GeneSweep pool Science 300 5625 2003 1484
-
(2003)
Science
, vol.300
, Issue.5625
, pp. 1484
-
-
Elizabeth, P.1
-
41
-
-
0028806048
-
Quantitative monitoring of gene expression patterns with a complementary DNA microarray
-
M. Schena, D. Shalon, R.W. Davis, and P.O. Brown Quantitative monitoring of gene expression patterns with a complementary DNA microarray Science 270 1995 467 470
-
(1995)
Science
, vol.270
, pp. 467-470
-
-
Schena, M.1
Shalon, D.2
Davis, R.W.3
Brown, P.O.4
-
42
-
-
0035296987
-
Making Chips to probe genes
-
S.K. Moore Making Chips to probe genes IEEE Spectrum 2001 54 60
-
(2001)
IEEE Spectrum
, pp. 54-60
-
-
Moore, S.K.1
-
43
-
-
0034659898
-
Genomics, gene expression and DNA arrays
-
D.J. Lockhart, and E.A. Winzeler Genomics, gene expression and DNA arrays Nature 405 2000 827 846
-
(2000)
Nature
, vol.405
, pp. 827-846
-
-
Lockhart, D.J.1
Winzeler, E.A.2
-
44
-
-
4944262651
-
A computational approach to gene expression data extraction and analysis
-
Special issue on Genomic Signal Processing November
-
A.W.C. Liew, L.K. Szeto, S.S. Tang, H. Yan, "A computational approach to gene expression data extraction and analysis", Special issue on Genomic Signal Processing, Journal of VLSI Signal Processing-Systems for Signal, Image, and Video Technology, Vol. 38, Issue 3, November 2004, pp. 237-258.
-
(2004)
Journal of VLSI Signal Processing-systems for Signal, Image, and Video Technology
, vol.38
, Issue.3
, pp. 237-258
-
-
Liew, A.W.C.1
Szeto, L.K.2
Tang, S.S.3
Yan, H.4
-
45
-
-
0037405886
-
Robust adaptive spot segmentation of DNA microarray images
-
A.W.C. Liew, H. Yan, and M. Yang Robust adaptive spot segmentation of DNA microarray images Pattern Recognition 36 5 2003 1251 1254
-
(2003)
Pattern Recognition
, vol.36
, Issue.5
, pp. 1251-1254
-
-
Liew, A.W.C.1
Yan, H.2
Yang, M.3
-
46
-
-
0004278772
-
-
Stanford University
-
M. Eisen, ScanAlyze User Manual. Stanford University, 1999. http://.rana.lbl.gov/EisenSoftware.htm.
-
(1999)
ScanAlyze User Manual
-
-
Eisen, M.1
-
48
-
-
0036208346
-
Improved background correction for spotted DNA microarrays
-
C. Kooperberg, T.G. Fazzio, J.J. Delrow, and T. Tsukiyama Improved background correction for spotted DNA microarrays J. Comp. Biol. 9 1 2002 55 66
-
(2002)
J. Comp. Biol.
, vol.9
, Issue.1
, pp. 55-66
-
-
Kooperberg, C.1
Fazzio, T.G.2
Delrow, J.J.3
Tsukiyama, T.4
-
49
-
-
0031246430
-
Ratio-based decisions and the quantitative analysis of cDNA microarray images
-
Y. Chen, E.R. Dougherty, and M.L. Bittner Ratio-based decisions and the quantitative analysis of cDNA microarray images J. Biomed. Opt. 2 1997 364 374
-
(1997)
J. Biomed. Opt.
, vol.2
, pp. 364-374
-
-
Chen, Y.1
Dougherty, E.R.2
Bittner, M.L.3
-
50
-
-
0035687554
-
Assessing gene significance from cDNA microarray expression data via mixed models
-
R.D. Wolfinger, G. Gibson, E.D. Wolfinger, L. Bennett, H. Hamadeh, P. Bushel, C. Afshari, and R.S. Paules Assessing gene significance from cDNA microarray expression data via mixed models J. Comp. Biol. 8 2001 625 637
-
(2001)
J. Comp. Biol.
, vol.8
, pp. 625-637
-
-
Wolfinger, R.D.1
Gibson, G.2
Wolfinger, E.D.3
Bennett, L.4
Hamadeh, H.5
Bushel, P.6
Afshari, C.7
Paules, R.S.8
-
51
-
-
1342294092
-
Normalization for cDNA microarray data: A robust composite method addressing single and multiple slide systematic variation
-
Y.H. Yang, S. Dudoit, P. Luu, D.M. Lin, V. Peng, J. Ngai, and T.P. Speed Normalization for cDNA microarray data a robust composite method addressing single and multiple slide systematic variation Nucl. Acids Res. 30 4 2002 e15
-
(2002)
Nucl. Acids Res.
, vol.30
, Issue.4
-
-
Yang, Y.H.1
Dudoit, S.2
Luu, P.3
Lin, D.M.4
Peng, V.5
Ngai, J.6
Speed, T.P.7
-
52
-
-
0034960264
-
Missing values estimation methods for DNA microarrays
-
O. Troyanskaya, M. Cantor, G. Sherlock, P. Brown, T. Hastie, R. Tibshirani, D. Botstein, and R.B. Altman Missing values estimation methods for DNA microarrays Bioinformatics 17 2001 520 525
-
(2001)
Bioinformatics
, vol.17
, pp. 520-525
-
-
Troyanskaya, O.1
Cantor, M.2
Sherlock, G.3
Brown, P.4
Hastie, T.5
Tibshirani, R.6
Botstein, D.7
Altman, R.B.8
-
53
-
-
10044259748
-
Missing value estimation for microarray data based on projection onto convex sets method
-
Cambridge, United Kingdom, 23-26 August
-
X. Gan, A.W.C. Liew, H. Yan, Missing value Estimation for Microarray Data Based on Projection onto Convex Sets method", Proceedings of the 17th International Conference on Pattern Recognition, Cambridge, United Kingdom, 23-26 August 2004.
-
(2004)
Proceedings of the 17th International Conference on Pattern Recognition
-
-
Gan, X.1
Liew, A.W.C.2
Yan, H.3
-
54
-
-
0031742022
-
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
-
P.T. Spellman, G. Sherlock, M.Q. Zhang, V.R. Iyer, K. Anders, M.B. Eisen, P.O. Brown, D. Botstein, and B. Futcher Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization Molecular Biol. Cell 9 1998 3273 3297 (http://cellcycle-www.stanford.edu )
-
(1998)
Molecular Biol. Cell
, vol.9
, pp. 3273-3297
-
-
Spellman, P.T.1
Sherlock, G.2
Zhang, M.Q.3
Iyer, V.R.4
Anders, K.5
Eisen, M.B.6
Brown, P.O.7
Botstein, D.8
Futcher, B.9
-
55
-
-
0042418821
-
-
European Molecular Biology Laboratory, Outstation Hinxton - the European Bioinformatics institute, Cambridge CB10 ISD UK
-
A. Brazma, J. Vilo, Minireview: gene expression data analysis, European Molecular Biology Laboratory, Outstation Hinxton - the European Bioinformatics institute, Cambridge CB10 ISD UK, 2000.
-
(2000)
Minireview: Gene Expression Data Analysis
-
-
Brazma, A.1
Vilo, J.2
-
56
-
-
0033536012
-
Gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays
-
U. Alon, N. Barkai, D.A. Notterman, K. Gish, S. Ybarra, D. Mack, and A.J. Levine Gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays Proc. Nat. Acad. Sci. USA 96 1999 6745 6750
-
(1999)
Proc. Nat. Acad. Sci. USA
, vol.96
, pp. 6745-6750
-
-
Alon, U.1
Barkai, N.2
Notterman, D.A.3
Gish, K.4
Ybarra, S.5
Mack, D.6
Levine, A.J.7
-
57
-
-
13044304179
-
Distinctive gene expression patterns in human mammary epithelial cells and breast cancers
-
C.M. Perou, S.S. Jeffrey, M. van de Rijn, C.A. Rees, M.B. Eisen, D.T. Ross, A. Pergamenschikov, C.F. Williams, S.X. Zhu, J.C.F. Lee, D. Lashkari, D. Shalon, P.O. Brown, and D. Botstein Distinctive gene expression patterns in human mammary epithelial cells and breast cancers Proc. Nat. Acad. Sci. USA 96 1999 9212 9217
-
(1999)
Proc. Nat. Acad. Sci. USA
, vol.96
, pp. 9212-9217
-
-
Perou, C.M.1
Jeffrey, S.S.2
Van De Rijn, M.3
Rees, C.A.4
Eisen, M.B.5
Ross, D.T.6
Pergamenschikov, A.7
Williams, C.F.8
Zhu, S.X.9
Lee, J.C.F.10
Lashkari, D.11
Shalon, D.12
Brown, P.O.13
Botstein, D.14
-
58
-
-
0032787555
-
Microarray analysis of Drosophila development during metamorphosis
-
K.P. White, S.A. Rifkin, P. Hurban, and D.S. Hogness Microarray analysis of Drosophila development during metamorphosis Science 286 1999 2179 2184
-
(1999)
Science
, vol.286
, pp. 2179-2184
-
-
White, K.P.1
Rifkin, S.A.2
Hurban, P.3
Hogness, D.S.4
-
59
-
-
0034800371
-
Principal component analysis for clustering gene expression data
-
K.Y. Yeung, and W.L. Ruzzo Principal component analysis for clustering gene expression data Bioinformatics 17 9 2001 763 774
-
(2001)
Bioinformatics
, vol.17
, Issue.9
, pp. 763-774
-
-
Yeung, K.Y.1
Ruzzo, W.L.2
-
60
-
-
85089829232
-
Interactive visualization and analysis for gene expression data
-
Big Island, HI, January
-
C. Tang, L. Zhang, A. Zhang, Interactive visualization and analysis for gene expression data, IEEE Proceedings of the Hawaii International Conference on System Sciences. Big Island, HI, January 2002, vol. 6, pp. 143-166.
-
(2002)
IEEE Proceedings of the Hawaii International Conference on System Sciences
, vol.6
, pp. 143-166
-
-
Tang, C.1
Zhang, L.2
Zhang, A.3
-
62
-
-
0033027794
-
Interpreting patterns of gene expression with self-organizing maps: Methods and application to hematopoietic differentiation
-
P. Tamayo, D. Slonim, J. Mesirov, Q. Zhu, S. Kitareewan, E. Dmitrovsky, E.S. Lander, and T.R. Golub Interpreting patterns of gene expression with self-organizing maps methods and application to hematopoietic differentiation Proc. Nat. Acad. Sci. USA 96 1999 2907 2912
-
(1999)
Proc. Nat. Acad. Sci. USA
, vol.96
, pp. 2907-2912
-
-
Tamayo, P.1
Slonim, D.2
Mesirov, J.3
Zhu, Q.4
Kitareewan, S.5
Dmitrovsky, E.6
Lander, E.S.7
Golub, T.R.8
-
63
-
-
0032561246
-
The transcriptional program of sporulation in budding yeast
-
S. Chu, J. DeRisi, M. Eisen, J. Mulholland, D. Botstein, P.O. Brown, and I. Herskowitz The transcriptional program of sporulation in budding yeast Science 282 1998 699 705
-
(1998)
Science
, vol.282
, pp. 699-705
-
-
Chu, S.1
Derisi, J.2
Eisen, M.3
Mulholland, J.4
Botstein, D.5
Brown, P.O.6
Herskowitz, I.7
-
64
-
-
0032668662
-
Identifying gene regulatory networks from experimental data
-
Lyon, France, March
-
T. Chen, V. Filkov, S.S. Skiena, Identifying gene regulatory networks from experimental data, Proceedings of the Third Annual International Conference on Computational Molecular Biology RECOMB99, Lyon, France, March 1999, pp. 94-103.
-
(1999)
Proceedings of the Third Annual International Conference on Computational Molecular Biology RECOMB99
, pp. 94-103
-
-
Chen, T.1
Filkov, V.2
Skiena, S.S.3
-
65
-
-
0033569406
-
Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
-
T.R. Golub, D.K. Slonim, P. Tamayo, C. Huard, M. Gaasenbeek, J.P. Mesirov, H. Coller, M.L. Loh, J.R. Downing, M.A. Caligiuri, C.D. Bloomfield, and E.S. Lander Molecular classification of cancer class discovery and class prediction by gene expression monitoring Science 286 1999 531 537
-
(1999)
Science
, vol.286
, pp. 531-537
-
-
Golub, T.R.1
Slonim, D.K.2
Tamayo, P.3
Huard, C.4
Gaasenbeek, M.5
Mesirov, J.P.6
Coller, H.7
Loh, M.L.8
Downing, J.R.9
Caligiuri, M.A.10
Bloomfield, C.D.11
Lander, E.S.12
-
66
-
-
0042515179
-
Gene expression data clustering and visualization based on a binary hierarchical clustering framework
-
L.K. Szeto, A.W.C. Liew, H. Yan, and S.S. Tang Gene expression data clustering and visualization based on a binary hierarchical clustering framework J. Vis. Lang. Comput. 14 2003 341 362
-
(2003)
J. Vis. Lang. Comput.
, vol.14
, pp. 341-362
-
-
Szeto, L.K.1
Liew, A.W.C.2
Yan, H.3
Tang, S.S.4
-
67
-
-
0036721824
-
K-means Iterative Fisher (KIF) unsupervised clustering algorithm applied to image texture segmentation
-
D.A. Clausi K-means Iterative Fisher (KIF) unsupervised clustering algorithm applied to image texture segmentation Pattern Recognition 35 2002 1959 1972
-
(2002)
Pattern Recognition
, vol.35
, pp. 1959-1972
-
-
Clausi, D.A.1
-
68
-
-
1842587592
-
Cluster analysis of gene expression data based on self-splitting and merging competitive learning
-
S. Wu, A.W.C. Liew, and H. Yan Cluster analysis of gene expression data based on self-splitting and merging competitive learning IEEE Trans. Inform. Technol. Biomed. 8 1 2004 5 15
-
(2004)
IEEE Trans. Inform. Technol. Biomed.
, vol.8
, Issue.1
, pp. 5-15
-
-
Wu, S.1
Liew, A.W.C.2
Yan, H.3
-
69
-
-
84945945977
-
A novel OPTOC-based clustering algorithm for gene expression data analysis
-
15-18 December Singapore
-
A.W.C. Liew, H. Yan, S. Wu, A novel OPTOC-based clustering algorithm for gene expression data analysis, Proceedings of the Fourth International Conference on Information, Communications & Signal Processing and Fourth IEEE Pacific-Rim Conference on Multimedia, ICICS-PCM2003, 15-18 December 2003, Singapore.
-
(2003)
Proceedings of the Fourth International Conference on Information, Communications & Signal Processing and Fourth IEEE Pacific-Rim Conference on Multimedia, ICICS-PCM2003
-
-
Liew, A.W.C.1
Yan, H.2
Wu, S.3
-
70
-
-
0036506135
-
Self-Splittng competitive learning: A new on-line clustering paradigm
-
Y.J. Zhang, and Z.Q. Liu Self-Splittng competitive learning a new on-line clustering paradigm IEEE Trans. Neural Networks 13 2002 369 380
-
(2002)
IEEE Trans. Neural Networks
, vol.13
, pp. 369-380
-
-
Zhang, Y.J.1
Liu, Z.Q.2
-
71
-
-
0030669030
-
Exploring the metabolic and genetic control of gene expression on a genomic scale
-
J.L. DeRisi, V.R. Lyer, and P.O. Brown Exploring the metabolic and genetic control of gene expression on a genomic scale Science 278 1997 680 686
-
(1997)
Science
, vol.278
, pp. 680-686
-
-
Derisi, J.L.1
Lyer, V.R.2
Brown, P.O.3
-
72
-
-
0034682504
-
Fundamental patterns underlying gene expression profiles: Simplicity from complexity
-
N.S. Holter, M. Mitra, A. Maritan, M. Cieplak, J.R. Banavar, and N.V. Fedoroff Fundamental patterns underlying gene expression profiles simplicity from complexity Proc. Nat. Acad. Sci. USA 97 2000 8409 8414
-
(2000)
Proc. Nat. Acad. Sci. USA
, vol.97
, pp. 8409-8414
-
-
Holter, N.S.1
Mitra, M.2
Maritan, A.3
Cieplak, M.4
Banavar, J.R.5
Fedoroff, N.V.6
-
73
-
-
0034730140
-
Singular value decomposition for genome-wide expression data processing and modeling
-
O. Alter, P.O. Brown, D. Botstein, Singular value decomposition for genome-wide expression data processing and modeling, Proc. Nat. Acad. Sci. USA 97 (2000) 10101-10106.
-
(2000)
Proc. Nat. Acad. Sci. USA
, vol.97
, pp. 10101-10106
-
-
Alter, O.1
Brown, P.O.2
Botstein, D.3
-
74
-
-
0034760495
-
Dynamic models of gene expression and classification
-
T.G. Dewey, and D.J. Galas Dynamic models of gene expression and classification Funct. Integr. Genomics 1 2001 69 278
-
(2001)
Funct. Integr. Genomics
, vol.1
, pp. 69-278
-
-
Dewey, T.G.1
Galas, D.J.2
-
76
-
-
0036100833
-
Analysis Techniques for microarray time series data
-
V. Filkov, S. Skiena, and J. Zhi Analysis Techniques for microarray time series data J. Comp. Biol. 9 2 2002 317 330
-
(2002)
J. Comp. Biol.
, vol.9
, Issue.2
, pp. 317-330
-
-
Filkov, V.1
Skiena, S.2
Zhi, J.3
-
77
-
-
0038281506
-
Inference of transcriptional regulation relationships from gene expression data
-
A.T. Kwon, H.H. Hoos, and R. Ng Inference of transcriptional regulation relationships from gene expression data Bioinformatics 19 8 2003 905 912
-
(2003)
Bioinformatics
, vol.19
, Issue.8
, pp. 905-912
-
-
Kwon, A.T.1
Hoos, H.H.2
Ng, R.3
-
78
-
-
33645488824
-
Measuring correlation between microarray time-series data using dominant spectral component
-
18-22 Jan Dunedin, New Zealand
-
L.K. Yeung, H. Yan, A.W.C. Liew, L.K. Szeto, M. Yang, R. Kong, Measuring correlation between microarray time-series data using dominant spectral component, Proceedings of the 2nd Asia-Pacific Bioinformatics Conference APBC2004, 18-22 Jan, 2004, Dunedin, New Zealand, pp. 309-314.
-
(2004)
Proceedings of the 2nd Asia-Pacific Bioinformatics Conference APBC2004
, pp. 309-314
-
-
Yeung, L.K.1
Yan, H.2
Liew, A.W.C.3
Szeto, L.K.4
Yang, M.5
Kong, R.6
-
79
-
-
1842559837
-
Dominant spectral component analysis for transcriptional regulations using microarray time-series data
-
L.K. Yeung, L.K. Szeto, A.W.C. Liew, and H. Yan Dominant spectral component analysis for transcriptional regulations using microarray time-series data Bioinformatics 20 5 2004 742 749
-
(2004)
Bioinformatics
, vol.20
, Issue.5
, pp. 742-749
-
-
Yeung, L.K.1
Szeto, L.K.2
Liew, A.W.C.3
Yan, H.4
|