메뉴 건너뛰기




Volumn 59, Issue 3, 2005, Pages 165-175

Bias correction with a single null marker for population stratification in candidate gene association studies

Author keywords

Association study; Bias; Confounding; Population stratification

Indexed keywords

ARTICLE; ETHNIC GROUP; GENETIC ASSOCIATION; LOGISTIC REGRESSION ANALYSIS; NULL ALLELE; POPULATION GENETICS; STATISTICAL MODEL;

EID: 21044444322     PISSN: 00015652     EISSN: None     Source Type: Journal    
DOI: 10.1159/000085940     Document Type: Article
Times cited : (20)

References (36)
  • 1
    • 0034686618 scopus 로고    scopus 로고
    • Population stratification in epidemiologic studies of common genetic variants and cancer: Quantification of bias
    • Wacholder S, Rothman N, Caporaso N: Population stratification in epidemiologic studies of common genetic variants and cancer: Quantification of bias. JNCI 2000;92:1151-1158.
    • (2000) JNCI , vol.92 , pp. 1151-1158
    • Wacholder, S.1    Rothman, N.2    Caporaso, N.3
  • 2
    • 0032427048 scopus 로고    scopus 로고
    • The relative power of family-based and case-control designs for linkage disequilibrium studies of complex human disease. I. DNA pooling
    • Risch N, Teng J : The relative power of family-based and case-control designs for linkage disequilibrium studies of complex human disease. I. DNA pooling. Genome Res 1998;8:1273-1288.
    • (1998) Genome Res , vol.8 , pp. 1273-1288
    • Risch, N.1    Teng, J.2
  • 3
    • 0036094264 scopus 로고    scopus 로고
    • Power and efficiency of the TDT and case-control design for association scans
    • McGinnis R, Shifman S, Darvasi A: Power and efficiency of the TDT and case-control design for association scans. Behav Genet 2002;32:135-144.
    • (2002) Behav Genet , vol.32 , pp. 135-144
    • McGinnis, R.1    Shifman, S.2    Darvasi, A.3
  • 4
    • 0033358548 scopus 로고    scopus 로고
    • Use of unlinked genetic markers to detect population stratification in association studies
    • Pritchard JK, Rosenberg NA: Use of unlinked genetic markers to detect population stratification in association studies. Am J Hum Genet 1999;65:220-228.
    • (1999) Am J Hum Genet , vol.65 , pp. 220-228
    • Pritchard, J.K.1    Rosenberg, N.A.2
  • 5
    • 0035191044 scopus 로고    scopus 로고
    • Unbiased Methods for Population-based Association Studies
    • Devlin B, Roeder K, Bacanu SA: Unbiased Methods for Population-based Association Studies. Genet Epidemiol 2001;21:273-284.
    • (2001) Genet Epidemiol , vol.21 , pp. 273-284
    • Devlin, B.1    Roeder, K.2    Bacanu, S.A.3
  • 6
    • 0035185344 scopus 로고    scopus 로고
    • Detecting association in a case-control study while correcting for population stratification
    • Reich DE, Goldstein DB: Detecting association in a case-control study while correcting for population stratification. Genet Epidemiol 2001;20:4-16.
    • (2001) Genet Epidemiol , vol.20 , pp. 4-16
    • Reich, D.E.1    Goldstein, D.B.2
  • 7
    • 0032714352 scopus 로고    scopus 로고
    • Genomic control for association studies
    • Devlin B, Roeder K: Genomic control for association studies. Biometrics 1999;55:997-1004.
    • (1999) Biometrics , vol.55 , pp. 997-1004
    • Devlin, B.1    Roeder, K.2
  • 9
    • 0035528928 scopus 로고    scopus 로고
    • Case-control studies of association in structured or admixed populations
    • Pritchard JK, Donnelly P: Case-control studies of association in structured or admixed populations. Theor Popul Biol 2001;60:227-237.
    • (2001) Theor Popul Biol , vol.60 , pp. 227-237
    • Pritchard, J.K.1    Donnelly, P.2
  • 10
    • 0036137032 scopus 로고    scopus 로고
    • Association studies for quantitative traits in structured populations
    • Bacanu SA, Devlin B, Roeder K: Association studies for quantitative traits in structured populations. Genet Epidemiol 2002;22:78-93.
    • (2002) Genet Epidemiol , vol.22 , pp. 78-93
    • Bacanu, S.A.1    Devlin, B.2    Roeder, K.3
  • 11
    • 0035121797 scopus 로고    scopus 로고
    • Accounting for unmeasured population substructure in case-control studies of genetic association using a novel latent-class model
    • Satten GA, Flanders WD, Yang Q: Accounting for unmeasured population substructure in case-control studies of genetic association using a novel latent-class model. Am J Hum Genet 2001;68:466-477.
    • (2001) Am J Hum Genet , vol.68 , pp. 466-477
    • Satten, G.A.1    Flanders, W.D.2    Yang, Q.3
  • 12
    • 0345742326 scopus 로고    scopus 로고
    • Population Stratification in the Candidate Gene Study: Fatal Threat or Red Herring?
    • Hutchison KE, Stallings M, McGeary J, Bryan A: Population Stratification in the Candidate Gene Study: Fatal Threat or Red Herring? Psychol Bull 2004;130:66-79.
    • (2004) Psychol Bull , vol.130 , pp. 66-79
    • Hutchison, K.E.1    Stallings, M.2    McGeary, J.3    Bryan, A.4
  • 13
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P: Inference of population structure using multilocus genotype data. Genetics 2000;155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 15
    • 0037648359 scopus 로고    scopus 로고
    • Control of confounding of genetic associations in stratified populations
    • Hoggart CJ, et al: Control of confounding of genetic associations in stratified populations. Am J Hum Genet 2003;72:1492-1504.
    • (2003) Am J Hum Genet , vol.72 , pp. 1492-1504
    • Hoggart, C.J.1
  • 16
    • 0032067789 scopus 로고    scopus 로고
    • The future of genetic studies of complex human diseases: An epidemiologic perspective
    • Khoury MJ, Yang Q: The future of genetic studies of complex human diseases: an epidemiologic perspective. Epidemiology 1998;9:350-354.
    • (1998) Epidemiology , vol.9 , pp. 350-354
    • Khoury, M.J.1    Yang, Q.2
  • 17
    • 3042616060 scopus 로고    scopus 로고
    • Putative ancestral origins of chromosomal segments in individual African Americans: Implications for admixture mapping
    • Seldin MF, Morii T, Collins-Schramm HE, Chima B, Kittles R, Criswell LA, Li H: Putative ancestral origins of chromosomal segments in individual African Americans: Implications for admixture mapping. Genome Res 2004;14:1076-1084.
    • (2004) Genome Res , vol.14 , pp. 1076-1084
    • Seldin, M.F.1    Morii, T.2    Collins-Schramm, H.E.3    Chima, B.4    Kittles, R.5    Criswell, L.A.6    Li, H.7
  • 18
    • 0025984375 scopus 로고
    • Discussing hidden bias in observational studies
    • Rosenbaum PR: Discussing hidden bias in observational studies. Ann Int Med 1991;115:901-905.
    • (1991) Ann Int Med , vol.115 , pp. 901-905
    • Rosenbaum, P.R.1
  • 19
    • 0346229817 scopus 로고
    • Foundations of program evaluation: Theories of practice
    • Shadish WR, Cook TD, Leviton LC: Foundations of program evaluation: Theories of practice. J Stud Alcohol 1991;61:827-835.
    • (1991) J Stud Alcohol , vol.61 , pp. 827-835
    • Shadish, W.R.1    Cook, T.D.2    Leviton, L.C.3
  • 22
    • 0032530165 scopus 로고    scopus 로고
    • Tests and estimates of allelic association in complex inheritance
    • Morton NE, Collins A: Tests and estimates of allelic association in complex inheritance. Proc Natl Acad Sci USA 1998;95:11389-11393.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 11389-11393
    • Morton, N.E.1    Collins, A.2
  • 23
    • 0034700892 scopus 로고    scopus 로고
    • Association studies of genetic polymorphisms and complex disease
    • Gambaro G, Anglani F, D'Angelo A: Association studies of genetic polymorphisms and complex disease. Lancet 2000;355:308-311.
    • (2000) Lancet , vol.355 , pp. 308-311
    • Gambaro, G.1    Anglani, F.2    D'Angelo, A.3
  • 24
    • 4944258167 scopus 로고    scopus 로고
    • Robustness of case-control studies of genetic factors to population stratification: Magnitude of bias and type I error
    • Khlat M, Cazes M-H, Genin E, Guiguet M: Robustness of case-control studies of genetic factors to population stratification: magnitude of bias and type I error. Cancer Epidemiol Biomarkers Prev 2004;13:1660-1664.
    • (2004) Cancer Epidemiol Biomarkers Prev , vol.13 , pp. 1660-1664
    • Khlat, M.1    Cazes, M.-H.2    Genin, E.3    Guiguet, M.4
  • 26
    • 0035528921 scopus 로고    scopus 로고
    • Genomic control, a new approach to genetic-based association studies
    • Devlin B, Roeder K, Wasserman L: Genomic control, a new approach to genetic-based association studies. Theor Popul Biol 2001;60:155-166.
    • (2001) Theor Popul Biol , vol.60 , pp. 155-166
    • Devlin, B.1    Roeder, K.2    Wasserman, L.3
  • 27
    • 0347362518 scopus 로고    scopus 로고
    • Informativeness of genetic markers for inference of ancestry
    • Rosenberg NA, Li LM, Ward R, Pritchard JK: Informativeness of genetic markers for inference of ancestry. Am J Hum Genet 2003;73:1402-1422.
    • (2003) Am J Hum Genet , vol.73 , pp. 1402-1422
    • Rosenberg, N.A.1    Li, L.M.2    Ward, R.3    Pritchard, J.K.4
  • 28
    • 77956891487 scopus 로고
    • Biased estimates of treatment effect in randomized experiments with nonlinear regressions and omitted covariates
    • Gail MH: Biased estimates of treatment effect in randomized experiments with nonlinear regressions and omitted covariates. Biometrika 1984;71:431-444.
    • (1984) Biometrika , vol.71 , pp. 431-444
    • Gail, M.H.1
  • 29
    • 0019416737 scopus 로고
    • Confounding: Essence and Detection
    • Miettinen OS, Cook EF: Confounding: Essence and Detection. AJE 1981;114:593-603.
    • (1981) AJE , vol.114 , pp. 593-603
    • Miettinen, O.S.1    Cook, E.F.2
  • 31
    • 0031661402 scopus 로고    scopus 로고
    • Assessing the Sensitivity of Regression Results to Unmeasured Confounders in Observational Studies
    • Lin DY, Psaty BM, Kronmal RA: Assessing the Sensitivity of Regression Results to Unmeasured Confounders in Observational Studies. Biometrics 1998;54:948-963.
    • (1998) Biometrics , vol.54 , pp. 948-963
    • Lin, D.Y.1    Psaty, B.M.2    Kronmal, R.A.3
  • 32
    • 0002644952 scopus 로고
    • Maximum likelihood estimation of mis-specified models
    • White H: Maximum likelihood estimation of mis-specified models. Econometrica 1982;50:1-25.
    • (1982) Econometrica , vol.50 , pp. 1-25
    • White, H.1
  • 33
    • 0036275761 scopus 로고    scopus 로고
    • Counterpoint: Bias from population stratification is not a major threat to the validity of conclusions from epidemiological studies of common polymorphisms and cancer
    • Wacholder S, Rothman N, Caporaso N: Counterpoint: Bias from population stratification is not a major threat to the validity of conclusions from epidemiological studies of common polymorphisms and cancer. Cancer Epidemiol Biomarkers Prev 2002;11:513-520.
    • (2002) Cancer Epidemiol Biomarkers Prev , vol.11 , pp. 513-520
    • Wacholder, S.1    Rothman, N.2    Caporaso, N.3
  • 34
    • 0036277684 scopus 로고    scopus 로고
    • Point: Population stratification: A problem or case-control studies of candidate-gene associations?
    • Thomas DC, Witte JS: Point: Population stratification: A problem or case-control studies of candidate-gene associations? Cancer Epidemiol. Biomarkers Prev 2002;11:505-512.
    • (2002) Cancer Epidemiol. Biomarkers Prev , vol.11 , pp. 505-512
    • Thomas, D.C.1    Witte, J.S.2
  • 35
    • 0037442092 scopus 로고    scopus 로고
    • Population stratification and spurious allelic association
    • Cardon LR, Palmer LJ: Population stratification and spurious allelic association. Lancet 2003;361:598-604.
    • (2003) Lancet , vol.361 , pp. 598-604
    • Cardon, L.R.1    Palmer, L.J.2
  • 36
    • 3042515443 scopus 로고    scopus 로고
    • Evaluating bias due to population stratification in case-control association studies of admixed populations
    • Wang Y, Localio R, Rebbeck TR: Evaluating bias due to population stratification in case-control association studies of admixed populations. Genet Epidemiol 2004;27:14-20.
    • (2004) Genet Epidemiol , vol.27 , pp. 14-20
    • Wang, Y.1    Localio, R.2    Rebbeck, T.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.