Matrix attachment regions increase the efficiency and stability of RNA-mediated resistance to Tomato Spotted Wilt Virus in transgenic tobacco

Transgenic Research

Volumn 14, Issue 2, 2005, Pages 193-206

  Levin, Jennifer S ^a   Thompson, William F ^a   Csinos, Alex S ^b   Stephenson, Michael G ^c   Weissinger, Arthur K ^a  

^a NORTH CAROLINA STATE UNIVERSITY   (United States)

^b UNIVERSITY OF GEORGIA   (United States)

^c UNIVERSITY OF GEORGIA   (United States)

Author keywords

Gene silencing; Matrix attachment regions; RNA mediated virus resistance; Tomato Spotted Wilt Virus

Indexed keywords

ARTICLE; BREEDING; DNA METHYLATION; GENE EXPRESSION REGULATION; GENE SILENCING; GENETIC TRANSCRIPTION; GENETICS; INNATE IMMUNITY; MATRIX ATTACHMENT REGION; PATHOGENICITY; PROMOTER REGION; TOBACCO; TOSPOVIRUS; TRANSGENIC PLANT; VIROLOGY;

BREEDING; DNA METHYLATION; GENE EXPRESSION REGULATION; GENE SILENCING; IMMUNITY, NATURAL; MATRIX ATTACHMENT REGIONS; PLANTS, GENETICALLY MODIFIED; PROMOTER REGIONS (GENETICS); TOBACCO; TOSPOVIRUS; TRANSCRIPTION, GENETIC;

LYCOPERSICON ESCULENTUM; NICOTIANA TABACUM; TOMATO SPOTTED WILT VIRUS; TOSPOVIRUS;

EID: 19944406474     PISSN: 09628819     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11248-004-5413-8     Document Type: Article

References (66)

1. GC Allen G Hall Jr. S Michalowski W Newman S Spiker AK Weissinger WF Thompson 1996 High-level transgene expression in plant cells: effects of a strong scaffold attachment region from tobacco Plant Cell 8 899 913
2. GC Allen S Spiker WF Thompson 2000 Use of matrix attachment regions (MARs) to minimize transgene silencing Plant Mol Biol 43 361 376
3. R Ascenzi B Ülker JJ Todd DA Sowinski CR Schimeneck GC Allen AK Weissinger WF Thompson 2003.Analysis of trans -silencing interactions using transcriptional silencers of varying strength and targets with and without flanking nuclear matrix attachment regions Transgenic Res 12 305 318
4. FM Ausubel R Brent RE Kingston DD Moore JG Seidman JA Smith K Struhl () 1995 Current Protocols in Molecular Biology John Wiley and Sons, Inc. New York
5. D Becker E Kemper J Schell R Masterson 1992 New plant binary vectors with selectable markers located proximal to the left T-DNA border Plant Mol Biol 20 1195 1197
6. C Brouwer W Bruce S Maddock Z Avramova B Bowen 2002 Suppression of transgene silencing by matrix attachment regions in maize: a dual role for the maize 5′ ADH1 matrix attachment region Plant Cell 14 2251 2264
7. LG Burk DU Gerstel EA Wernsman 1979 Maternal haploids of Nicotiana tabacumL. from seed Science 206 585
8. KG Campbell EA Wernsman WP Fitzmaurice JA Burns 1994 Construction of a designer chromosome in tobacco Theor Appl Genet 87 837 842
9. KH Cox RB Goldberg 1988 Analysis of plant gene expression C.H. Shaw Plant Molecular Biology: A Practical Approach. Information Printing Ltd. Oxford 1 35
10. AS Csinos HR Pappu RM McPherson MG Stephenson 2001 Management of Tomato spotted wilt virus in flue-cured tobacco with acibenzolar-S-methyl and imidacloprid Plant Dis 85 292 296
11. T Dalmay AJ Hamilton S Rudd S Angell DC Baulcombe 2000.An RNA-dependent RNA polymerase gene in Arabidopsis is required for posttranscriptional gene silencing mediated by a transgene but not by a virus Cell 101 543 553
12. T Elmayan H Vaucheret 1996 Expression of single copies of a strongly expressed 35S transgene can be silenced post-transcriptionally Plant J 9 787 797
13. JJ English DC Baulcombe 1997 The influence of small changes in transgene transcription on homology-dependent virus resistance and gene silencing Plant J 12 1311 1318
14. EJ Finnegan M Wang P Waterhouse 2001 Gene silencing: fleshing out the bones Curr Biol 11 R99 R102
15. TL German DE Ullman JW Moyer 1992 Tospoviruses: diagnosis, molecular biology, phylogeny, and vector relationships Annu Rev Phytopathol 30 315 348
16. R Goldbach E Bucher M Prins 2003 Resistance mechanisms to plant viruses: an overview Virus Res 92 207 212
17. C Gonsalves B Xue SZ Pang R Provvidenti JL Slightom D Gonsalves 1996 Breeding transgenic tomatoes for resistance to tomato spotted wilt virus and cucumber mosaic virus Acta Horticult 431 442 44
18. J Goodwin K Chapman S Swaney TD Parks Wernsman EA WG Dougherty 1996 Genetic and biochemical dissection of transgenic RNA-mediated virus resistance Plant Cell 8 95 105
19. R Grumet 1994 Development of virus resistant plants via genetic engineering Plant Breeding Rev 12 47 79
20. A Gubba C Gonsalves MR Stevens DM Tricoli D Gonsalves 2002 Combining transgenic and natural resistance to obtain broad resistance to tospovirus infection in tomato (Lycopersicon esculentummill) Mol Breeding 9 13 23
21. GE Hall Jr. GC Allen DS Loer WF Thompson S Spiker 1991 Nuclear scaffolds and scaffold-attachment regions in higher plants Proc Natl Acad Sci USA 88 9320 9324
22. AJ Hamilton O Voinnet L Chapell DC Baulcombe 2002 Two classes of short interfering RNA in RNA silencing EMBO J 21 4671 4679
23. S Herrero A Culbreath A Csinos H Pappu RC Rufty ME Daub 2000 Nucleocapsid gene-mediated transgenic resistance provides protection against Tomato spotted wilt virusepidemics in the field Phytopathology 90 139 147
24. R Holmes-Davis L Comai 1998 Nuclear matrix attachment regions and plant gene expression Trends Plant Sci 3 91 96
25. JJMR Jacobs K Litière V Van Dijk GJ Van Eldik M Van Montagu M Cornelissen 1997 Post-transcriptional ß-1,3-glucanase gene silencing involves increased transcript turnover that is translation-independent Plant J 12 885 893
26. MJ Kasperbauer GB Collins 1972 Reconstitution of diploids from leaf tissue of anther-derived haploid in tobacco Crop Sci 12 98 101
27. NJ Kilby HMO Leyser IJ Furner 1992 Promoter methylation and progressive transgene inactivation in Arabidopsis Plant Mol Biol 20 103 112
28. JW Kim SSM Sun TL German 1994 Disease resistance in tobacco and tomato plants transformed with the tomato spotted wilt virus nucleocapsid gene Plant Dis 78 615 621
29. SP Kumpatla W Teng WG Buchholz TC Hall 1997 Epigenetic transcriptional silencing and 5-azacytidine-mediated reactivation of a complex transgene in rice Plant Physiol 115 361 373
30. SP Kumpatla TC Hall 1998.Recurrent onset of epigenetic silencing in rice harboring a multi-copy transgene Plant J 14 129 135
31. JA Lindbo L Silva-Rosales WM Proebsting WG Dougherty 1993 Induction of a highly specific antiviral state in transgenic plants: Implications for regulation of gene expression and virus resistance Plant Cell 5 1749 1759
32. YS Liu JS Levin JS Murray EA Wernsman AK Weissinger 2003 A multi-generation analysis of the stability of transgenic virus resistance in doubled-haploid tobacco lines Mol Breeding 12 145 156
33. ZV Magbanua HD Wilde JK Roberts K Chowdhury J Abad JW Moyer HY Wetzstein WA Parrot 2000 Field resistance to Tomato spotted wilt virus in transgenic peanut (Arachis hypogeaL.) expressing an antisense nucleocapsid gene sequence Mol Breeding 6 227 236
34. SL Mankin 2000 Chromatin elements and transgene expression in tobacco cells North Carolina State University, Raleigh NC, USA Ph.D. Dissertation
35. SL Mankin GC Allen T Phelan S Spiker WF Thompson 2003 Elevation of transgene expression level by flanking matrix attachment regions (MAR) is promoter dependent: a study of the interactions of six promoters with the RB7 3′ MAR Transgenic Res 12 3 12
36. R Marathe R Anandalakshmi TH Smith GJ Pruss VB Vance 2000 RNA viruses as inducers, suppressors and targets of post-transcriptional gene silencing Plant Mol Biol 43 295 306
37. AJM Matzke MA Matzke 1998 Position effects and epigenetic silencing of plant transgenes Curr Opin Plant Biol 1 142 148
38. MF Mette J Vander Winden Matzke MA AJM Matzke 1999 Production of aberrant promoter transcripts contributes to methylation and silencing of unlinked homologous promoters in trans EMBO J 18 241 248
39. MF Mette W Aufsatz J Vander Winden Matzke MA AJM Matzke 2000.Transcriptional silencing and promoter methylation triggered by double-stranded RNA EMBO J 19 5194 5201
40. KK Mishra AK Handa 1998 Post-transcriptional silencing of pectin methylesterase gene in transgenic tomato fruits results from impaired pre-mRNA processing Plant J 14 583 592
41. L Mlynárová RC Jansen AJ Conner Stiekema WJ J-P Nap 1995 The MAR-mediated reduction in position effect can be uncoupled from copy number-dependent expression in transgenic plants Plant Cell 7 599 609
42. L Mlynárová A Hricová A Loonen J-P Nap 2003 presence of a chromatin boundary appears to shield a transgene in tobacco from RNA silencing Plant Cell 15 2203 2217
43. E Mueller J Gilbert G Davenport G Brigneti DC Baulcombe 1995 Homology-dependent resistance: transgenic virus resistance in plants related to homology-dependent gene silencing Plant J 7 1001 1013
44. F Neuhuber Y-D Park AJM Matzke MA Matke 1994 Susceptibility of transgene loci to homology-dependent gene silencing Mol Gen Genet 244 230 241
45. S-Z Pang P Nagpala M Wang JL Slightom D Gonsalves 1992 Resistance to heterologous isolates of tomato spotted wilt virus in transgenic tobacco expressing its nucleocapsid protein gene Phytopathology 82 1223 1229
46. S-Z Pang F-J Jan K Carney J Stout DM Tricoli HD Quemada D Gonsalves 1996 Post-transcriptional transgene silencing and consequent tospovirus resistance in transgenic lettuce are affected by transgene dosage and plant development Plant J 9 899 909
47. S-Z Pang F-J Jan D. Gonsalves 1997 Nontarget DNA sequences reduce the transgene length necessary for RNA-mediated tospovirus resistance in transgenic plants Proc Natl Acad Sci USA 94 8261 8266
48. J Paszkowski SA Whitham 2001 Gene silencing and DNA methylation processes Curr Opin Plant Biol 4 123 129
49. Pickford AS C Cogoni 2003 RNA-mediated gene silencing Cell Mol Life Sci 60 871 882
50. Q Que H-Y Wang JJ English RA Jorgensen 1997 The frequency and degree of cosuppression by sense chalcone synthase transgenes are dependent on transgene promoter strength and are reduced by premature nonsense codons in the transgene coding sequence Plant Cell 9 1357 1368
51. JM Sherman JW Moyer ME Daub 1998 Tomato spotted wilt virus resistance in chrysanthemum expressing the viral nucleocapsid gene Plant Dis 82 407 414
52. P Stoeva M Yankulova V Nikolaeva R Bachvarova L Ivanova E Maiss G Adam V Vulkov S Guelemerov A Atanassov 1998 Long-term resistance to tomato spotted wilt virus in transgenic tobacco cultivars expressing the viral nucleoprotein gene: greenhouse and field tests Mol Breeding 4 155 164
53. P Susi M Hohkuri T Wahlroos NJ Kilby 2004 Characteristics of RNA silencing in plants: similarities and differences across kingdoms Plant Mol Biol 54 157 174
54. MM Tanzer WF Thompson MD Law EA Wernsman S Uknes 1997 Characterization of post-transcriptionally suppressed transgene expression that confers resistance to tobacco etch virus infection in tobacco Plant Cell 9 1411 1423
55. F Tenllado JR Díaz-Ruíz 1999 Complete resistance to pepper mild mottle tobamovirus mediated by viral replicase sequences partially depends on transgene homozygosity and is based on a gene silencing mechanism Transgenic Res 8 83 93
56. WF Thompson GC Allen G Hall Jr. S Spiker 1996 attachment regions and transgene expression JP Gustafson RB Flavell Genomes of Plants and Animals 21st Stadler Genetics Symposium. Plenum Press New York 243 269
57. B Ülker GC Allen WF Thompson S Spiker AK Weissinger 1999 A tobacco matrix attachment region reduces the loss of transgene expression in the progeny of transgenic tobacco plants Plant J 18 253 263
58. P Vain B Worland A Kohli JW Snape P Christou Allen GC EM Thompson 1999 Matrix attachment regions increase transgene expression levels and stability in transgenic rice plants and their progeny Plant J 18 233 242
59. T Vanden Boogaart F Wen JW Davies GP Lomonossoff 2001 Replicase-derived resistance against Pea early browning virus in Nicotiana benthamianais an unstable resistance based upon posttranscriptional gene silencing Mol Plant-Microbe Interact 14 196 203
60. H Vaucheret T Elmayan D Thierry A van der Geest T Hall AJ Conner Mlynárová L J-P Nap 1998 Flank matrix attachment regions (MARs) from chicken, bean, yeast, or tobacco do not prevent homology-dependent trans-silencing in transgenic tobacco plants Mol Gen Genet 259 388 392
61. H Vaucheret M Fagard 2001 Transcriptional gene silencing in plants: targets, inducers, and regulators Trends Genet 17 29 35
62. H Vaucheret C Béclin M Fagard 2001 Post-transcriptional gene silencing in plants J Cell Science 114 3083 3091
63. M Wassenegger 2002 silencing-based disease resistance Transgenic Res 11 639 653
64. JC Watson LS Kaufman WF Thompson 1987 Developmental regulation of cytosine methylation in the nuclear ribosomal RNA genes of Pisum sativum J Mol Biol 193 15 26
65. H Yu PP Kumar 2003 Post transcriptional gene silencing in plants by RNA Plant Cell Reports 22 167 174
66. PD Zamore T Tuschi PA Sharp DP Bartel 2000 RNAi: Double-stranded RNA directs the ATP-dependent cleavage of mRNA at 21-23 nucleotide intervals Cell 101 25 33