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Volumn 348, Issue 5, 2005, Pages 1273-1282

Rapid creation of a novel protein function by in vitro coevolution

Author keywords

Directed evolution; Nuclear hormone receptor; Nuclear receptor evolution; Protein engineering; Rational design

Indexed keywords

CELL NUCLEUS RECEPTOR; CORTICOSTERONE; ESTRADIOL; ESTROGEN RECEPTOR ALPHA; HORMONE RECEPTOR; LIGAND; PROGESTERONE; TESTOSTERONE;

EID: 18044364063     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jmb.2005.02.070     Document Type: Article
Times cited : (57)

References (36)
  • 2
    • 0035471134 scopus 로고    scopus 로고
    • Enzyme redesign
    • T.M. Penning, and J.M. Jez Enzyme redesign Chem. Rev. 101 2001 3027 3046
    • (2001) Chem. Rev. , vol.101 , pp. 3027-3046
    • Penning, T.M.1    Jez, J.M.2
  • 3
    • 0035843136 scopus 로고    scopus 로고
    • Combinatorial and computational challenges for biocatalyst design
    • F.H. Arnold Combinatorial and computational challenges for biocatalyst design Nature 409 2001 253 257
    • (2001) Nature , vol.409 , pp. 253-257
    • Arnold, F.H.1
  • 4
    • 0001270261 scopus 로고    scopus 로고
    • Design by directed evolution
    • F.H. Arnold Design by directed evolution Accts. Chem. Res. 31 1998 125 131
    • (1998) Accts. Chem. Res. , vol.31 , pp. 125-131
    • Arnold, F.H.1
  • 5
    • 0035818409 scopus 로고    scopus 로고
    • Directed evolution of single proteins, metabolic pathways, and viruses
    • C. Schmidt-Dannert Directed evolution of single proteins, metabolic pathways, and viruses Biochemistry 40 2001 13125 13136
    • (2001) Biochemistry , vol.40 , pp. 13125-13136
    • Schmidt-Dannert, C.1
  • 6
    • 1842577640 scopus 로고    scopus 로고
    • Anovel ADP- and zinc-binding fold from function-directed in vitro evolution
    • P. Lo Surdo, M.A. Walsh, and M. Sollazzo Anovel ADP- and zinc-binding fold from function-directed in vitro evolution Nature Struct. Mol. Biol. 11 2004 382 383
    • (2004) Nature Struct. Mol. Biol. , vol.11 , pp. 382-383
    • Lo Surdo, P.1    Walsh, M.A.2    Sollazzo, M.3
  • 8
    • 0030220851 scopus 로고    scopus 로고
    • Engineering new functions and altering existing functions
    • Z. Shao, and F.H. Arnold Engineering new functions and altering existing functions Curr. Opin. Struct. Biol. 6 1996 513 518
    • (1996) Curr. Opin. Struct. Biol. , vol.6 , pp. 513-518
    • Shao, Z.1    Arnold, F.H.2
  • 9
    • 0032510667 scopus 로고    scopus 로고
    • Directed evolution of an aspartate aminotransferase with new substrate specificities
    • T. Yano, S. Oue, and H. Kagamiyama Directed evolution of an aspartate aminotransferase with new substrate specificities Proc. Natl Acad. Sci. USA 95 1998 5511 5515
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 5511-5515
    • Yano, T.1    Oue, S.2    Kagamiyama, H.3
  • 10
    • 4043048739 scopus 로고    scopus 로고
    • Directed evolution of human estrogen receptor variants with significantly enhanced androgen specificity and affinity
    • Z. Chen, B.S. Katzenellenbogen, J.A. Katzenellenbogen, and H. Zhao Directed evolution of human estrogen receptor variants with significantly enhanced androgen specificity and affinity J. Biol. Chem. 279 2004 33855 33864
    • (2004) J. Biol. Chem. , vol.279 , pp. 33855-33864
    • Chen, Z.1    Katzenellenbogen, B.S.2    Katzenellenbogen, J.A.3    Zhao, H.4
  • 11
    • 1242294391 scopus 로고    scopus 로고
    • Allosteric control of ligand selectivity between estrogen receptors alpha and beta. Implications for other nuclear receptors
    • K.W. Nettles, J. Sun, J.T. Radek, S. Sheng, A.L. Rodriguez, and J.A. Katzenellenbogen Allosteric control of ligand selectivity between estrogen receptors alpha and beta. Implications for other nuclear receptors Mol. Cell 13 2004 317 327
    • (2004) Mol. Cell , vol.13 , pp. 317-327
    • Nettles, K.W.1    Sun, J.2    Radek, J.T.3    Sheng, S.4    Rodriguez, A.L.5    Katzenellenbogen, J.A.6
  • 12
    • 15944396556 scopus 로고    scopus 로고
    • Structural analysis of affinity matured antibodies and laboratory-evolved enzymes
    • M.C. Orencia, M.A. Hanson, and R.C. Stevens Structural analysis of affinity matured antibodies and laboratory-evolved enzymes Advan. Protein Chem. 55 2000 227 259
    • (2000) Advan. Protein Chem. , vol.55 , pp. 227-259
    • Orencia, M.C.1    Hanson, M.A.2    Stevens, R.C.3
  • 14
    • 0032574779 scopus 로고    scopus 로고
    • Specificity in cholesterol regulation of gene expression by coevolution of sterol regulatory DNA element and its binding protein
    • J.N. Athanikar, and T.F. Osborne Specificity in cholesterol regulation of gene expression by coevolution of sterol regulatory DNA element and its binding protein Proc. Natl Acad. Sci. USA 95 1998 4935 4940
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 4935-4940
    • Athanikar, J.N.1    Osborne, T.F.2
  • 15
    • 0035056971 scopus 로고    scopus 로고
    • Evolution of nuclear- and mitochondrial-encoded subunit interaction in cytochrome c oxidase
    • T.R. Schmidt, W. Wu, M. Goodman, and L.I. Grossman Evolution of nuclear- and mitochondrial-encoded subunit interaction in cytochrome c oxidase Mol. Biol. Evol. 18 2001 563 569
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 563-569
    • Schmidt, T.R.1    Wu, W.2    Goodman, M.3    Grossman, L.I.4
  • 18
    • 0030199294 scopus 로고    scopus 로고
    • Nuclear hormone receptors: Ligand-activated regulators of transcription and diverse cell responses
    • J.A. Katzenellenbogen, and B.S. Katzenellenbogen Nuclear hormone receptors: ligand-activated regulators of transcription and diverse cell responses Chem. Biol. 3 1996 529 536
    • (1996) Chem. Biol. , vol.3 , pp. 529-536
    • Katzenellenbogen, J.A.1    Katzenellenbogen, B.S.2
  • 20
    • 0031446999 scopus 로고    scopus 로고
    • Nuclear receptors: Structure, function and involvement in disease
    • S. Tenbaum, and A. Baniahmad Nuclear receptors: Structure, function and involvement in disease Int. J. Biochem. Cell Biol. 29 1997 1325 1341
    • (1997) Int. J. Biochem. Cell Biol. , vol.29 , pp. 1325-1341
    • Tenbaum, S.1    Baniahmad, A.2
  • 22
    • 0031039888 scopus 로고    scopus 로고
    • Comparison of the ligand binding specificity and transcript tissue distribution of estrogen receptors alpha and beta
    • G.G. Kuiper, B. Carlsson, K. Grandien, E. Enmark, J. Haggblad, S. Nilsson, and J.A. Gustafsson Comparison of the ligand binding specificity and transcript tissue distribution of estrogen receptors alpha and beta Endocrinology 138 1997 863 870
    • (1997) Endocrinology , vol.138 , pp. 863-870
    • Kuiper, G.G.1    Carlsson, B.2    Grandien, K.3    Enmark, E.4    Haggblad, J.5    Nilsson, S.6    Gustafsson, J.A.7
  • 23
    • 0031974628 scopus 로고    scopus 로고
    • Determinants of ligand specificity of estrogen receptor-alpha: Estrogen versus androgen discrimination
    • K. Ekena, J.A. Katzenellenbogen, and B.S. Katzenellenbogen Determinants of ligand specificity of estrogen receptor-alpha: estrogen versus androgen discrimination J. Biol. Chem. 273 1998 693 699
    • (1998) J. Biol. Chem. , vol.273 , pp. 693-699
    • Ekena, K.1    Katzenellenbogen, J.A.2    Katzenellenbogen, B.S.3
  • 24
    • 0000830158 scopus 로고    scopus 로고
    • Methods for optimizing industrial enzymes by directed evolution
    • A.L. Demain J.E. Davies 2nd edit. ASM Press Washington, DC
    • H. Zhao, J.C. Moore, A.A. Volkov, and F.H. Arnold Methods for optimizing industrial enzymes by directed evolution A.L. Demain J.E. Davies Manual of Industrial Microbiology and Biotechnology 2nd edit. 1999 ASM Press Washington, DC 597 604
    • (1999) Manual of Industrial Microbiology and Biotechnology , pp. 597-604
    • Zhao, H.1    Moore, J.C.2    Volkov, A.A.3    Arnold, F.H.4
  • 25
    • 0031059270 scopus 로고    scopus 로고
    • The estradiol pharmacophore: Ligand structure-estrogen receptor binding affinity relationships and a model for the receptor binding site
    • G.M. Anstead, K.E. Carlson, and J.A. Katzenellenbogen The estradiol pharmacophore: ligand structure-estrogen receptor binding affinity relationships and a model for the receptor binding site Steroids 62 1997 268 303
    • (1997) Steroids , vol.62 , pp. 268-303
    • Anstead, G.M.1    Carlson, K.E.2    Katzenellenbogen, J.A.3
  • 26
    • 0038711505 scopus 로고    scopus 로고
    • Mutation of Leu-536 in human estrogen receptor-alpha alters the coupling between ligand binding, transcription activation, and receptor conformation
    • C. Zhao, A. Koide, J. Abrams, S. Deighton-Collins, A. Martinez, and J.A. Schwartz Mutation of Leu-536 in human estrogen receptor-alpha alters the coupling between ligand binding, transcription activation, and receptor conformation J. Biol. Chem. 278 2003 27278 27286
    • (2003) J. Biol. Chem. , vol.278 , pp. 27278-27286
    • Zhao, C.1    Koide, A.2    Abrams, J.3    Deighton-Collins, S.4    Martinez, A.5    Schwartz, J.A.6
  • 27
    • 0031451570 scopus 로고    scopus 로고
    • Evolution of the nuclear receptor superfamily: Early diversification from an ancestral orphan receptor
    • V. Laudet Evolution of the nuclear receptor superfamily: early diversification from an ancestral orphan receptor J. Mol. Endocrinol. 19 1997 207 226
    • (1997) J. Mol. Endocrinol. , vol.19 , pp. 207-226
    • Laudet, V.1
  • 28
    • 0035826690 scopus 로고    scopus 로고
    • Evolution of vertebrate steroid receptors from an ancestral estrogen receptor by ligand exploitation and serial genome expansions
    • J.W. Thornton Evolution of vertebrate steroid receptors from an ancestral estrogen receptor by ligand exploitation and serial genome expansions Proc. Natl Acad. Sci. USA 98 2001 5671 5676
    • (2001) Proc. Natl Acad. Sci. USA , vol.98 , pp. 5671-5676
    • Thornton, J.W.1
  • 29
    • 0141431993 scopus 로고    scopus 로고
    • Resurrecting the ancestral steroid receptor: Ancient origin of estrogen signaling
    • J.W. Thornton, E. Need, and D. Crews Resurrecting the ancestral steroid receptor: Ancient origin of estrogen signaling Science 301 2003 1714 1717
    • (2003) Science , vol.301 , pp. 1714-1717
    • Thornton, J.W.1    Need, E.2    Crews, D.3
  • 30
    • 0035846958 scopus 로고    scopus 로고
    • In vitro evolution of beta-glucuronidase into a beta-galactosidase proceeds through non-specific intermediates
    • I. Matsumura, and A.D. Ellington In vitro evolution of beta-glucuronidase into a beta-galactosidase proceeds through non-specific intermediates J. Mol. Biol. 305 2001 331 339
    • (2001) J. Mol. Biol. , vol.305 , pp. 331-339
    • Matsumura, I.1    Ellington, A.D.2
  • 32
    • 0033117461 scopus 로고    scopus 로고
    • Catalytic promiscuity and the evolution of new enzymatic activities
    • P.J. O'Brien, and D. Herschlag Catalytic promiscuity and the evolution of new enzymatic activities Chem. Biol. 6 1999 R91 R105
    • (1999) Chem. Biol. , vol.6
    • O'Brien, P.J.1    Herschlag, D.2
  • 34
    • 0038752617 scopus 로고    scopus 로고
    • Computational design of receptor and sensor proteins with novel functions
    • L.L. Looger, M.A. Dwyer, J.J. Smith, and H.W. Hellinga Computational design of receptor and sensor proteins with novel functions Nature 423 2003 185 190
    • (2003) Nature , vol.423 , pp. 185-190
    • Looger, L.L.1    Dwyer, M.A.2    Smith, J.J.3    Hellinga, H.W.4
  • 36
    • 0034956939 scopus 로고    scopus 로고
    • Overexpression, purification, and crystal structure of native ER alpha LBD
    • S. Eiler, M. Gangloff, S. Duclaud, D. Moras, and M. Ruff Overexpression, purification, and crystal structure of native ER alpha LBD Protein Exp. Purif. 22 2001 165 173
    • (2001) Protein Exp. Purif. , vol.22 , pp. 165-173
    • Eiler, S.1    Gangloff, M.2    Duclaud, S.3    Moras, D.4    Ruff, M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.