X for intersection: Retrotransposition both on and off the X chromosome is more frequent

Trends in Genetics

Volumn 21, Issue 1, 2005, Pages 3-7

  Khil, Pavel P ^a   Oliver, Brian ^a   Camerini Otero, R Daniel ^a  

^a NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

AUTOSOME; DNA SEQUENCE; DNA TRANSPOSITION; DROSOPHILA MELANOGASTER; GENE MUTATION; GENE TARGETING; GENOME; HUMAN; HUMAN GENOME; HUMAN VERSUS ANIMAL COMPARISON; MEIOSIS; MOLECULAR EVOLUTION; NONHUMAN; PRIORITY JOURNAL; RETROPOSON; REVIEW; SEX CHROMOSOME; X CHROMOSOME; X CHROMOSOME INACTIVATION; Y CHROMOSOME;

ANIMALIA; DROSOPHILA MELANOGASTER; MELANOGASTER;

EID: 13144258789     PISSN: 01689525     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.tig.2004.11.005     Document Type: Short Survey

References (45)

1. D. Zarkower Establishing sexual dimorphism: conservation amidst diversity? Nat. Rev. Genet. 2 2001 175 185
2. B. Charlesworth The evolution of chromosomal sex determination Novartis Found Symp 244 2002 207 219
3. H. Skaletsky The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes Nature 423 2003 825 837
4. J.A. Marshall Graves Human Y chromosome, sex determination, and spermatogenesis - a feminist view Biol. Reprod. 63 2000 667 676
5. L.D. Hurst Evolutionary genomics. Sex and the X Nature 411 2001 149 150
6. J.A. Graves Evolution of the human X-a smart and sexy chromosome that controls speciation and development Cytogenet. Genome Res. 99 2002 141 145
7. E.J. Vallender, and B.T. Lahn How mammalian sex chromosomes acquired their peculiar gene content BioEssays 26 2004 159 169
8. D.W. Rogers Male genes: X-pelled or X-cluded? BioEssays 25 2003 739 741
9. J.J. Emerson Extensive gene traffic on the mammalian X chromosome Science 303 2004 537 540
10. E. Betran Retroposed new genes out of the X in Drosophila Genome Res. 12 2002 1854 1859
11. J.R. McCarrey, and K. Thomas Human testis-specific PGK gene lacks introns and possesses characteristics of a processed gene Nature 326 1987 501 505
12. P.J. Wang X chromosomes, retrogenes and their role in male reproduction Trends Endocrinol. Metab. 15 2004 79 83
13. E. Betran, and M. Long Dntf-2r, a young Drosophila retroposed gene with specific male expression under positive Darwinian selection Genetics 164 2003 977 988
14. J. Bradley An X-to-autosome retrogene is required for spermatogenesis in mice Nat. Genet. 36 2004 872 876
15. P.P. Khil The mouse X chromosome is enriched for sex-biased genes not subject to selection by meiotic sex chromosome inactivation Nat. Genet. 36 2004 642 646
16. P.J. Wang An abundance of X-linked genes expressed in spermatogonia Nat. Genet. 27 2001 422 426
17. E.T. Prak Tracking an embryonic L1 retrotransposition event Proc. Natl. Acad. Sci. U. S. A. 100 2003 1832 1837
18. E. Lifschytz, and D.L. Lindsley The role of X-chromosome inactivation during spermatogenesis (Drosophila-allocycly-chromosome evolution-male sterility-dosage compensation) Proc. Natl. Acad. Sci. U. S. A. 69 1972 182 186
19. L. Rastelli, and M.I. Kuroda An analysis of maleless and histone H4 acetylation in Drosophila melanogaster spermatogenesis Mech. Dev. 71 1998 107 117
20. M. Parisi Paucity of genes on the Drosophila x chromosome showing male-biased expression Science 299 2003 697 700
21. J.M. Ranz Sex-dependent gene expression and evolution of the Drosophila transcriptome Science 300 2003 1742 1745
22. E.S. Lander Initial sequencing and analysis of the human genome Nature 409 2001 860 921
23. R.H. Waterston Initial sequencing and comparative analysis of the mouse genome Nature 420 2002 520 562
24. C. Esnault Human LINE retrotransposons generate processed pseudogenes Nat. Genet. 24 2000 363 367
25. P.L. Deininger Mobile elements and Mammalian genome evolution Curr. Opin. Genet. Dev. 13 2003 651 658
26. J.S. Myers A comprehensive analysis of recently integrated human Ta L1 elements Am. J. Hum. Genet. 71 2002 312 326
27. E.M. Ostertag, and H.H. Kazazian Jr Biology of mammalian L1 retrotransposons Annu. Rev. Genet. 35 2001 501 538
28. W.R. Rice Sex chromosomes and the evolution of sexual dimorphism Evolution 38 1984 735 742
29. J. Jurka Active Alu elements are passed primarily through paternal germlines Theor. Popul. Biol. 61 2002 519 530
30. C.I. Wu, and E.Y. Xu Sexual antagonism and X inactivation-the SAXI hypothesis Trends Genet. 19 2003 243 247
31. B. Oliver, and M. Parisi Battle of the Xs BioEssays 26 2004 543 548
32. A.J. Solari The behavior of the XY pair in mammals Int. Rev. Cytol. 38 1974 273 317
33. B.D. McKee, and M.A. Handel Sex chromosomes, recombination, and chromatin conformation Chromosoma 102 1993 71 80
34. M.A. Handel The XY body: a specialized meiotic chromatin domain Exp. Cell Res. 296 2004 57 63
35. V. Reinke Sex and the genome Nat. Genet. 36 2004 548 549
36. G.M. Saifi, and H.S. Chandra An apparent excess of sex- and reproduction-related genes on the human X chromosome Proc. R. Soc. Lond. B. Biol. Sci. 266 1999 203 209
37. M.J. Lercher Evidence that the human X chromosome is enriched for male-specific but not female-specific genes Mol. Biol. Evol. 20 2003 1113 1116
38. V. Reinke A global profile of germline gene expression in C. elegans Mol. Cell 6 2000 605 616
39. V. Reinke Genome-wide germline-enriched and sex-biased expression profiles in Caenorhabditis elegans Development 131 2004 311 323
40. P.L. Deininger, and M.A. Batzer Mammalian retroelements Genome Res. 12 2002 1455 1465
41. M. Dewannieux LINE-mediated retrotransposition of marked Alu sequences Nat. Genet. 35 2003 41 48
42. Z. Zhang Comparative analysis of processed pseudogenes in the mouse and human genomes Trends Genet. 20 2004 62 67
43. Z. Zhang Millions of years of evolution preserved: a comprehensive catalog of the processed pseudogenes in the human genome Genome Res. 13 2003 2541 2558
44. D. Torrents A genome-wide survey of human pseudogenes Genome Res. 13 2003 2559 2567
45. Ohshima, K. et al. (2003) Whole-genome screening indicates a possible burst of formation of processed pseudogenes and Alu repeats by particular L1 subfamilies in ancestral primates. Genome Biol. 4, R74, doi:10.1186/gb-2003-4- 11-r74 (http://genomebiology.com/2003/4/11/R74)