Crystal structure of the human ATP-dependent splicing and export factor UAP56

Proceedings of the National Academy of Sciences of the United States of America

Volumn 101, Issue 51, 2004, Pages 17628-17633

  Shi, Hang ^a   Cordin, Olivier ^b,c   Minder, C Michael ^a   Linder, Patrick ^b   Xu, Rui Ming ^a  

^a Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

^b UNIVERSITY OF GENEVA MEDICAL SCHOOL   (Switzerland)

^c CNRS   (France)

Author keywords

Crystallography; Export; Helicase; RNA processing

Indexed keywords

ADENOSINE DIPHOSPHATE; ADENOSINE TRIPHOSPHATASE; BIOLOGICAL FACTOR; HELICASE; PROTEIN UAP56; UNCLASSIFIED DRUG;

ARTICLE; CRYSTAL STRUCTURE; MOLECULAR MODEL; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN DOMAIN; PROTEIN INTERACTION; PROTEIN PROCESSING; PROTEIN PURIFICATION; PROTEIN STRUCTURE; RNA SPLICING; STRUCTURE ANALYSIS;

ADENOSINE DIPHOSPHATE; ADENOSINE TRIPHOSPHATASES; ADENOSINE TRIPHOSPHATE; AMINO ACID MOTIFS; AMINO ACID SEQUENCE; BINDING SITES; CRYSTALLOGRAPHY, X-RAY; DEAD-BOX RNA HELICASES; HUMANS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MUTATION; PROTEIN CONFORMATION; RNA; RNA HELICASES; SEQUENCE ALIGNMENT;

EID: 11144222543     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0408172101     Document Type: Article

References (46)

1. Reed, R. (2003) Curr. Opin. Cell Biol. 15, 326-331.
2. Maquat, L. E. (2004) Nat. Rev. Mol. Cell Biol. 5, 89-99.
3. Staley, J. P. & Guthrie, C. (1998) Cell 92, 315-326.
4. Silverman, E., Edwalds-Gilbert, G. & Lin, R. J. (2003) Gene 312, 1-16.
5. Fleckner, J., Zhang, M., Valcarcel, J. & Green, M. R. (1997) Genes Dev. 11, 1864-1872.
6. Kistler, A. L. & Guthrie, C. (2001) Genes Dev. 15, 42-49.
7. Libri, D., Graziani, N., Saguez, C. & Boulay, J. (2001) Genes Dev. 15, 36-41.
8. Zhang, M. & Green, M. R. (2001) Genes Dev. 15, 30-35.
9. Luo, M. L., Zhou, Z., Magni, K., Christoforides, C., Rappsilber, J., Mann, M. & Reed, R. (2001) Nature 413, 644-647.
10. Jensen, T. H., Boulay, J., Rosbash, M. & Libri, D. (2001) Curr. Biol. 11, 1711-1715.
11. Gatfield, D., Le Hir, H., Schmitt, C., Braun, I. C., Kocher, T., Wilm, M. & Izaurralde, E. (2001) Curr. Biol. 11, 1716-1721.
12. Strasser, K. & Hurt, E. (2001) Nature 413, 648-652.
13. Herold, A., Teixeira, L. & Izaurralde, E. (2003) EMBO J. 22, 2472-2483.
14. Longman, D., Johnstone, I. L. & Caceres, J. F. (2003) RNA 9, 881-891.
15. MacMorris, M., Brocker, C. & Blumenthal, T. (2003) RNA 9, 847-857.
16. Strasser, K., Masuda, S., Mason, P., Pfannstiel, J., Oppizzi, M., Rodriguez-Navarro, S., Rondon, A. G., Aguilera, A., Struhl, K., Reed, R. & Hurt, E. (2002) Nature 417, 304-308.
17. Will, C. L. & Luhrmann, R. (2001) Science 291, 1916-1917.
18. Schwer, B. (2001) Nat. Struct. Biol. 8, 113-116.
19. Caruthers, J. M., Johnson, E. R. & McKay, D. B. (2000) Proc. Natl. Acad. Sci. USA 97, 13080-13085.
20. Yao, N., Hesson, T., Cable, M., Hong, Z., Kwong, A. D., Le, H. V. & Weber, P. C. (1997) Nat. Struct. Biol. 4, 463-467.
21. Kim, J. L., Morgenstern, K. A., Griffith, J. P., Dwyer, M. D., Thomson, J. A., Murcko, M. A., Lin, C. & Caron, P. R. (1998) Structure (London) 6, 89-100.
22. Tanner, N. K., Cordin, O., Banroques, J., Doere, M. & Linder, P. (2003) Mol. Cell 11, 127-138.
23. Otwinowski, Z. & Minor, W. (1997) Methods Enzymol. 276, 307-326.
24. Navaza, J. (2001) Acta Crystallogr. D 57, 1367-1372.
25. Brünger, A. T., Adams, P. D., Clore, G. M., DeLano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J. S., Kuszewski, J., Nilges, M., Pannu, N. S., et al. (1998) Acta Crystallogr. D. 54, 905-921.
26. Jones, T. A., Zou, J. Y., Cowan, S. W. & Kjeldgaard (1991) Acta Crystallogr. A. 47, 110-119.
27. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.
28. Merritt, E. A. & Bacon, D. J. (1997) Methods Enzymol. 277, 505-524.
29. Nicholls, A., Sharp, K. A. & Honig, B. (1991) Proteins 11, 281-296.
30. DeLano, W. L. (2002) The PYMOL Molecular Graphics System (DeLano Scientific, San Carlos, CA).
31. Gorbalenya, A. E. & Koonin, E. V. (1993) Curr. Opin. Struct. Biol. 3, 419-429.
32. Laskowski, R. A., Macarthur, M. W., Moss, D. S. & Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291.
33. Story, R. M. & Steitz, T. A. (1992) Nature 355, 374-376.
34. Caruthers, J. M. & McKay, D. B. (2002) Curr. Opin. Struct. Biol. 12, 123-133.
35. Story, R. M., Li, H. & Abelson, J. N. (2001) Proc. Natl. Acad. Sci. USA 98, 1465-1470.
36. Johnson, E. R. & McKay, D. B. (1999) RNA 5, 1526-1534.
37. Benz, J., Trachsel, H. & Baumann, U. (1999) Structure 7, 671-679.
38. Machius, M., Henry, L., Palnitkar, M. & Deisenhofer, J. (1999) Proc. Natl. Acad. Sci. USA 96, 11717-11722.
39. Theis, K., Chen, P. J., Skorvaga, M., Van Houten, B. & Kisker, C. (1999) EMBO J. 18, 6899-6907.
40. Nakagawa, N., Sugahara, M., Masui, R., Kato, R., Fukuyama, K. & Kuramitsu, S. (1999) J. Biochem. (Tokyo) 126, 986-990.
41. Velankar, S. S., Soultanas, P., Dillingham, M. S., Subramanya, H. S. & Wigley, D. B. (1999) Cell 97, 75-84.
42. Cho, H. S., Ha, N. C., Kang, L. W., Chung, K. M., Back, S. H., Jang, S. K. & Oh, B. H. (1998) J. Biol. Chem. 273, 15045-15052.
43. Hunt, J. F., Weinkauf, S., Henry, L., Fak, J. J., McNicholas, P., Oliver, D. B. & Deisenhofer, J. (2002) Science 297, 2018-2026.
44. Zhao, R., Shen, J., Green, M. R., MacMorris, M. & Blumenthal, T. (2004) Structure (London) 12, 1373-1381.
45. Korolev, S., Hsieh, J., Gauss, G. H., Lohman, T. M. & Waksman, G. (1997) Cell 90, 635-647.
46. Liu, Z., Luyten, I., Bottomley, M. J., Messias, A. C., Houngninou-Molango, S., Sprangers, R., Zanier, K., Kramer, A. & Sattler, M. (2001) Science 294, 1098-1102.