Chromatin reprogramming of male somatic cell-derived Xist and Tsix in ES hybrid cells

Cytogenetic and Genome Research

Volumn 99, Issue 1-4, 2002, Pages 106-114

  Kimura, H ^a   Tada, M ^a   Hatano, S ^a   Yamazaki, M ^a   Nakatsuji, N ^a   Tada, T ^a  

^a KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

HISTONE H3; HISTONE H4; RNA;

ACETYLATION; ANIMAL TISSUE; ARTICLE; CHEMICAL MODIFICATION; CHROMATIN STRUCTURE; DNA METHYLATION; EMBRYO; EMBRYO CELL; FLUORESCENCE IN SITU HYBRIDIZATION; GENE REPRESSION; GENETIC TRANSCRIPTION; HYBRID; IMMUNOPRECIPITATION; MALE; MOUSE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROMOTER REGION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SOMATIC CELL GENETICS; STEM CELL; TELOMERE; X CHROMOSOME; X CHROMOSOME INACTIVATION;

ANIMALS; BASE SEQUENCE; CELL LINE; CHROMATIN; DNA; DNA METHYLATION; EMBRYO; GENE REARRANGEMENT; HYBRID CELLS; IN SITU HYBRIDIZATION, FLUORESCENCE; MALE; MICE; MICE, INBRED STRAINS; PROMOTER REGIONS (GENETICS); REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA; RNA, UNTRANSLATED; SEQUENCE ANALYSIS, DNA; STEM CELLS; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

MAMMALIA;

EID: 0345393226     PISSN: 14248581     EISSN: None     Source Type: Journal    
DOI: 10.1159/000071581     Document Type: Article

References (54)

1. Beard C, Li E, Jaenisch R: Loss of methylation activates Xist in somatic but not in embryonic cells. Genes Dev 9:2325-2334 (1995).
2. Belyaev N, Keohane AM, Turner BM: Differential underacetylation of histones H2A, H3 and H4 on the inactive X chromosome in human female cells. Hum Genet 97:573-578 (1996).
3. Boggs BA, Cheung P, Heard E, Spector DL, Chinault AC, Allis CD: Differentially methylated forms of histone H3 show unique association patterns with inactive human X chromosomes. Nature Genet 30:73-76 (2002).
4. Borsani G, Tonlorenzi R, Simmler MC, Dandole L, Arnaud D, Capra V, Grompe M, Pizzuti A, Muzny D, Lawrence C, Willard HF, Avner P, Ballabio A: Characterization of a murine gene expressed from the inactive X chromosome. Nature 351:325-329 (1991).
5. Brockdorff N, Ashworth A, Kay GF, Cooper PJ, Smith S, McCabe VM, Norris DP, Penny GD, Patel D, Rastan S: Conservation of position and exclusive expression of mouse Xist from the inactive X chromosome. Nature 351:329-331 (1991).
6. Brown CJ, Ballabio A, Rupert JL, Lafreniere RG, Grompe M, Tonlorenzi R, Willard, HF: A gene from the region of the human X inactivation centre is expressed exclusively from the inactive X chromosome. Nature 349:38-44 (1991).
7. Chao W, Huynh KD, Spencer RJ, Davidow LS, Lee JT: CTCF, a candidate trans-acting factor for X-inactivation choice. Science 295:345-347 (2002).
8. Costanzi C, Pehrson JR: Histone macroH2A1 is concentrated in the inactive X chromosome of female mammals. Nature 393:599-601 (1998).
9. Debrand E, Chureau C, Arnaud D, Avner P, Heard E: Functional analysis of the DXPas34 locus, a 3′ regulator of Xist expression. Mol Cell Biol 19:8513-8525 (1999).
10. Friedrich G, Soriano P: Promoter traps in embryonic stem cells: a genetic screen to identify and mutate developmental genes in mice. Genes Dev 5:1513-1523 (1991).
11. Fry CJ, Peterson CL: Chromatin remodeling enzymes: who's on first? Curr Biol 11:185-197 (2001).
12. Gu H, Kitamura D, Rajewsky K: B cell development regulated by gene rearrangement: arrest of maturation by membrane-bound D mu protein and selection of DH element reading frames. Cell 65:47-54 (1991).
13. Hajkova P, Erhardt S, Lane N, Haaf T, El-Maarri O, Reik W, Walter J, Surani M: Epigenetic reprogramming in mouse primordial germ cells. Mech Dev 117:15-23 (2002).
14. Heard E, Rougeulle C, Arnaud D, Avner P, Allis CD, Spector DL: Methylation of histone H3 at Lys-9 is an early mark on the X chromosome during X inactivation. Cell 107:727-738 (2001).
15. Jenuwein T, Allis CD: Translating the histone code. Science 293: 1074-1080 (2001).
16. Jeppesen P, Turner BM: The inactive X chromosome in female mammals is distinguished by a lack of histone H4 acetylation, a cytogenetic marker for gene expression. Cell 74:281-289 (1993).
17. Johnston CM, Nesterova TB, Formstone EJ, Newall AET, Duthie SM, Sheardown SA, Brockdorff N: Developmentally regulated Xist promoter switch mediates initiation of X inactivation. Cell 94:809-817 (1998).
18. Jones PL, Veenstra GJC, Wade PA, Vermaak D, Kass SU, Landsberger N, Strouboulis J, Wolffe AP: Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription. Nature Genet 19:187-191 (1998).
19. Koide T, Moriwaki K, Uchida K, Mita A, Sagai T, Yonekawa H, Katoh H, Miyashita N, Tsuchiya K, Nielsen TJ, Shiroishi T: A new inbred strain JF1 established from Japanese fancy mouse carrying the classic piebald allele. Mamm Genome 9:15-19 (1998).
20. Lachner M, Jenuwein T: The many faces of histone lysine methylation. Curr Opin Cell Biol 14:286-298 (2002).
21. Lawrence JB, Singer RH, Marselle LM: Highly localized tracks of specific transcripts within interphase nuceli visualized by in situ hybridization. Cell 57:493-502 (1989).
22. Lee J, Inoue K, Ono R, Ogonuki N, Kohda T, Kaneko-Ishino T, Ogura A, Ishino F: Erasing genomic imprinting memory in mouse clone embryos produced from day 11.5 primordial germ cells. Development 129:1807-1817 (2002).
23. Lee JT: Disruption of imprinted X inactivation by parent-of-origin effects at Tsix. Cell 103:17-27 (2000).
24. Lee JT, Davidow LS, Warshawsky D: Tsix, a gene antisense to Xist at the X-inactivation centre. Nature Genet 21:400-404 (1999).
25. Lee JT, Lu N: Targeted mutagenesis of Tsix leads to nonrandom X inactivation. Cell 99:47-57 (1999).
26. Levin SD, Anderson SJ, Forbush KA, Perlmutter RM: A dominant-negative transgene defines a role for p56lck in thymopoiesis. EMBO J 12:1671-1680 (1993).
27. Litt MD, Simpson M, Gaszner M, Allis CD, Felsenfeld G: Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus. Science 293:2453-2455 (2001).
28. Lyon MF: Gene action in the X-chromosome of the mouse (Mus musculus L.). Nature 22:372-373 (1961).
29. Marahrens Y, Panning B, Dausman J, Strauss W, Jaenisch R: Xist-deficient mice are defective in dosage compensation but not spermatogenesis. Genes Dev 11:156- 166 (1997).
30. Mermoud JE, Popova B, Peters AH, Jenuwein T, Brockdorff N: Histone H3 lysine 9 methylation occurs rapidly at the onset of random X chromosome inactivation. Curr Biol 12:247-251 (2002).
31. Monk M, Harper MI: Sequential X chromosome inactivation coupled with cellular differentiation in early mouse embryos. Nature 281:311-313 (1979).
32. Monk M, McLaren A: X-chromosome activity in foetal germ cells. J Embryol Exp Morph 63:75-84 (1981).
33. Nan X, Ng HH, Johnson CA, Laherty CD, Turner BM, Eisenman RN, Bird A: Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex. Nature 393:386-389 (1998).
34. Nesterova TB, Mermoud JE, Hilton K, Pehrson J, Surani MA, McLaren A, Brockdorff N: Xist expression and macroH2A1.2 localisation in mouse primordial and pluripotent embryonic germ cells. Differentiation 69:216-225 (2002).
35. Norris DP, Brockdorff N, Rastan S: Methylation status of CpG-rich islands on active and inactive mouse X chromosomes. Mamm Genome 1:78-83 (1991).
36. Norris DP, Patel D, Kay GF, Graeme DP, Brockdorff N, Sheardown SA, Rastan S: Evidence that random and imprinted Xist expression is controlled by preemptive methylation. Cell 77:41-51 (1994).
37. O'Neill LP, Keohane AM, Lavender JS, McCabe V, Heard E, Avner P, Brockdorff N, Turner BM: A developmental switch in H4 acetylation upstream of Xist plays a role in X chromosome inactivation. EMBO J 18:2897-907 (1999).
38. Panning B, Dausman J, Jaenisch R: X chromosome inactivation is mediated by Xist RNA stabilization. Cell 90:907-916 (1997).
39. Panning B, Jaenisch R: DNA hypomethylation can activate Xist expression and silence X-linked genes. Genes Dev 10:1991-2002 (1996).
40. Peters AH, Mermoud JE, O'Carroll D, Pagani M, Schweizer D, Brockdorff N, Jenuwein T: Histone H3 lysine 9 methylation is an epigenetic imprint of facultative heterochromatin. Nature Genet 30:77-80 (2002).
41. Prissette M, El-Maarri O, Arnaud D, Walter J, Avner P: Methylation profiles of DXPas34 during the onset of X-inactivation. Hum molec Genet 10: 31-38 (2001).
42. Sado T, Wang Z, Sasaki H, Li E: Regulation of imprinted X-chromosome inactivation in mice by Tsix. Development 128:1275-1286 (2001).
43. Santos-Rosa H, Schneider R, Bannister AJ, Sherriff J, Bernstein BE, Emre NC, Schreiber SL, Mellor J, Kouzarides T: Active genes are trimethylated at K4 of histone H3. Nature 419:407-411 (2002).
44. Sheardown SA, Duthie SM, Johnston CM, Newall AET, Formstone EJ, Arkell RM, Nesterova TB, Alghisi G-C, Rastan S, Brockdorff N: Stabilization of Xist RNA mediate initiation of X chromosome inactivation. Cell 91:99-107 (1997).
45. Szabo PE, Mann JR: Biallelic expression of imprinted genes in the mouse germ line: implications for erasure, establishment, and mechanisms of genomic imprinting. Genes Dev 9:1857-1868 (1995).
46. Tada M, Tada T, Lefebvre L, Barton SC, Surani MA: Embryonic germ cells induce epigenetic reprogramming of somatic nucleus in hybrid cells. EMBO J 16:6510-6520 (1997).
47. Tada M, Takahama Y, Abe K, Nakatsuji N, Tada T: Nuclear reprogramming of somatic cells by in vitro hybridization with ES cells. Curr Biol 11:1553-1558 (2001).
48. Tada T, Tada M, Hilton K, Barton SC, Sado T, Takagi N, Surani MA: Epigenotype switching of imprintable loci in embryonic germ cells. Dev Gene Evol 207:551- 561 (1998).
49. Takagi N: Variable X chromosome inactivation patterns in near-tetraploid murine EC x somatic cell hybrid cells differentiated in vitro. Genetica 88: 107-117 (1993).
50. Takagi N, Sugawara O, Sasaki M: Regional and temporal changes in the pattern of X-chromosome replication during the early post-implantation development of the female mouse. Chromosoma 85:275-286 (1982).
51. Takagi N, Yoshida MA, Sugawara O, Sasaki M: Reversal of X-inactivation in female mouse somatic cells hybridized with murine teratocarcinoma stem cells in vitro.Cell 34:1053-1062 (1983).
52. Tam PP, Zhou SX, Tan S-S: X-chromosome activity of the mouse primordial germ cells revealed by the expression of an X-linked lacZ transgene. Development 120:2925-2932 (1994).
53. Tribioli C, Tamanini F, Patrosso C, Milanesi L, Villa A, Pergolizzi R, Maestrini E, Rivella S, Bione S, Mancini M, et al: Methylation and sequence analysis around EagI sites: identification of 28 new CpG islands in Xq24-Xq28. Nucl Acids Res 20:727-733 (1992).
54. Warshawsky D, Stavropoulos N, Lee JT: Further examination of the Xist promoter-switch hypothesis in X inactivation: evidence against the existence and function of a P(0) promoter. Proc natl Acad Sci, USA 96:14424-14429 (1999).