The first direct characterization of a high-valent iron intermediate in the reaction of an α-ketoglutarate-dependent dioxygenase: A high-spin Fe(IV) complex in taurine/α-ketoglutarate dioxygenase (TauD) from Escherichia coli

Biochemistry

Volumn 42, Issue 24, 2003, Pages 7497-7508

  Price, John C ^a   Barr, Eric W ^a   Tirupati, Bhramara ^a   Bollinger Jr , J Martin ^a,b   Krebs, Carsten ^a,c  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b 108 Althouse Laboratory   (United States)

^c 306 S Frear Bldg ^*  (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTICS; COLLAGEN; COMPLEXATION; DNA; ELECTRON SPECTROSCOPY; ESCHERICHIA COLI; PARAMAGNETIC RESONANCE; SYNTHESIS (CHEMICAL);

MICROBES;

ENZYME KINETICS;

2 OXOGLUTARIC ACID; ACETAL DERIVATIVE; ALPHA KETOGLUTARATE DIOXYGENASE; ASPARTIC ACID; CARBOXYLIC ACID; HISTIDINE; IRON; IRON COMPLEX; KETONE; OXYGENASE; TAURINE DIOXYGENASE; UNCLASSIFIED DRUG;

ARTICLE; COLLAGEN SYNTHESIS; DNA ALKYLATION; ELECTRON SPIN RESONANCE; ENZYME MECHANISM; ESCHERICHIA COLI; HYDROXYLATION; MOSSBAUER SPECTROSCOPY; NONHUMAN; OXIDATION; PRIORITY JOURNAL; RADIOLYSIS; SPECTROSCOPY;

ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTRON TRANSPORT; ESCHERICHIA COLI; FERROUS COMPOUNDS; HYDROXYLATION; IRON; KETOGLUTARIC ACIDS; KINETICS; MIXED FUNCTION OXYGENASES; RIBONUCLEOTIDE REDUCTASES; SPECTROSCOPY, MOSSBAUER; TAURINE; TEMPERATURE;

ESCHERICHIA COLI; MAMMALIA; NEGIBACTERIA;

EID: 0038747011     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi030011f     Document Type: Article

References (47)

1. Que, L., Jr., and Ho, R. Y. N. (1996) Chem. Rev. 96, 2607-2624.
2. Ryle, M. J., and Hausinger, R. P. (2002) Curr. Opin. Chem. Biol. 6, 193-201.
3. Prescott, A. G., and Lloyd, M. D. (2000) Nat. Prod. Rep. 17, 367-383.
4. Baldwin, J. E., and Bradley, M. (1990) Chem. Rev. 90, 1079-1088.
5. Baldwin, J. E., Adlington, R. M., Crouch, N. P., Schofield, C. J., Turner, N. J., and Aplin, R. T. (1991) Tetrahedron 47, 9881-9900.
6. Choroba, O. W., Williams, D. H., and Spencer, J. B. (2000) J. Am. Chem. Soc. 122, 5389-5390.
7. Ivan, M., Kondo, K., Yang, H., Kim, W., Valiando, J., Ohh, M., Salic, A., Asara, J. M., Lane, W. S., and Kaelin, W. G., Jr. (2001) Science 292, 464-468.
8. Jaakkola, P., Mole, D. R., Tian, Y.-M., Wilson, M. I., Gielbert, J., Gaskell, S. J., von Kriegsheim, A., Hebestreit, H. F., Mukherji, M., Schofield, C. J., Maxwell, P. H., Pugh, C. W., and Ratcliffe, P. J. (2001) Science 292, 468-472.
9. Epstein, A. C. R., Gleadle, J. M., McNeill, L. A., Hewitson, K. S., O'Rourke, J., Mole, D. R., Mukherji, M., Metzen, E., Wilson, M. I., Dhanda, A., Tian, Y.-M., Masson, N., Hamilton, D. L., Jaakkola, P., Barstead, R., Hodgkin, J., Maxwell, P. H., Pugh, C. W., Schofield, C. J., and Ratcliffe, P. J. (2001) Cell 107, 43-54.
10. Bruick, R. K., and McKnight, S. L. (2001) Science 294, 1337-1340.
11. Trewick, S. C., Henshaw, T. F., Hausinger, R. P., Lindahl, T., and Sedgwick, B. (2002) Nature 419, 174-178.
12. Duncan, T., Trewick, S. C., Koivisto, P., Bates, P. A., Lindahl, T., and Sedgwick, B. (2002) Proc. Natl. Acad. Sci. U.S.A. 99, 16660-16665.
13. Kivirikko, K. I. (1993) Ann. Med. 25, 113-126.
14. Kuutti-Savolainen, E. R., Risteli, J., Miettinen, T. A., and Kivirikko, K. I. (1979) Eur. J. Clin. Invest. 9, 89-95.
15. Hocart, C. H., Halpern, B., Hick, L. A., Wong, C. O., Hammond, J. W., and Wilcken, B. (1983) J. Chromatogr. 275, 237-243.
16. Verhoeven, N. M., Wanders, R. J. A., Poll-The, B. T., Saudubray, J. M., and Jakobs, C. (1998) J. Inherited Metab. Dis. 21, 697-728.
17. Solomon, E. I., Brunold, T. C., Davis, M. I., Kemsley, J. N., Lee, S.-K., Lehnert, N., Neese, F., Skulan, A. J., Yang, Y.-S., and Zhou, J. (2000) Chem. Rev. 100, 235-349.
18. Eichhorn, E., Van Der Ploeg, J. R., Kertesz, M. A., and Leisinger, T. (1997) J. Biol. Chem. 272, 23031-23036.
19. Ryle, M. J., Padmakumar, R., and Hausinger, R. P. (1999) Biochemistry 38, 15278-15286.
20. Ho, R. Y. N., Mehn, M. P., Hegg, E. L., Liu, A., Ryle, M. J., Hausinger, R. P., and Que, L., Jr. (2001) J. Am. Chem. Soc. 123, 5022-5029.
21. Pavel, E. G., Zhou, J., Busby, R. W., Gunsior, M., Townsend, C. A., and Solomon, E. I. (1998) J. Am. Chem. Soc. 120, 743-753.
22. Zhou, J., Kelly, W. L., Bachmann, B. O., Gunsior, M., Townsend, C. A., and Solomon, E. I. (2001) J. Am. Chem. Soc. 123, 7388-7398.
23. Elkins, J. M., Ryle, M. J., Clifton, I. J., Hotopp, J. C. D., Lloyd, J. S., Burzlaff, N. I., Baldwin, J. E., Hausinger, R. P., and Roach, P. L. (2002) Biochemistry 41, 5185-5192.
24. Gill, S. C., and von Hippel, P. H. (1990) Anal. Biochem. 189, 283.
25. Hitchman, M. L. (1978) Chemical Analysis, Vol. 49: Measurement of Dissolved Oxygen, Wiley, New York.
26. Bollinger, J. M., Jr., Tong, W. H., Ravi, N., Huynh, B. H., Edmondson, D. E., and Stubbe, J. (1994) J. Am. Chem. Soc. 116, 8015-23.
27. Ravi, N., Bollinger, J. M., Jr., Huynh, B. H., Stubbe, J., and Edmondson, D. E. (1994) J. Am. Chem. Soc. 116, 8007-8014.
28. Baldwin, J., Krebs, C., Ley, B. A., Edmondson, D. E., Huynh, B. H., and Bollinger, J. M., Jr. (2000) J. Am. Chem. Soc. 122, 12195-12206.
29. Arciero, D. M., Lipscomb, J. D., Huynh, B. H., Kent, T. A., and Münck, E. (1983) J. Biol. Chem. 258, 14981-14989.
30. Wolgel, S. A., Dege, J. E., Perkins-Olson, P. E., Juarez-Garcia, C. H., Crawford, R. L., Münck, E., and Lipscomb, J. D. (1993) J. Bacteriol. 175, 4414-4426.
31. Sturgeon, B. E., Burdi, D., Chen, S., Huynh, B. H., Edmondson, D. E., Stubbe, J., and Hoffman, B. M. (1996) J. Am. Chem. Soc. 118, 7551-7557.
32. Davydov, R., Kuprin, S., Gräslund, A., and Ehrenberg, A. (1994) J. Am. Chem. Soc. 116, 11120-11128.
33. Valentine, A. M., Tavares, P., Pereira, A. S., Davydov, R., Krebs, C., Hoffman, B. M., Edmondson, D. E., Huynh, B. H., and Lippard, S. J. (1998) J. Am. Chem. Soc. 120, 2190-2191.
34. Liu, K. E., Valentine, A. M., Wang, D., Huynh, B. H., Edmondson, D. E., Salifoglou, A., and Lippard, S. J. (1995) J. Am. Chem. Soc. 117, 10174-10185.
35. Debrunner, P. G. (1989) Phys. Bioinorg. Chem. Ser. 4, 137-234.
36. Simonneaux, G., Scholz, W. F., Reed, C. A., and Lang, G. (1982) Biochim. Biophys. Acta 716, 1-7.
37. Grapperhaus, C. A., Mienert, B., Bill, E., Weyhermüller, T., and Wieghardt, K. (2000) Inorg. Chem. 39, 5306-5317.
38. Rohde, J.-U., In, J.-H., Lim, M. H., Brennessel, W. W., Bukowski, M. R., Stubna, A., Münck, E., Nam, W., and Que, L., Jr. (2003) Science 299, 1037-1039.
39. Lim, M. H., Rohde, J.-U., Stubna, A., Bukowski, M. R., Costas, M., Ho, R. Y., Münck, E., Nam, W., and Que, L., Jr. (2003) Proc. Natl. Acad. Sci. U.S.A., 100, 3665-3670.
40. Zheng, H., Yoo, S. J., Münck, E., and Que, L., Jr. (2000) J. Am. Chem. Soc. 122, 3789-3790.
41. Shu, L., Nesheim, J. C., Kauffmann, K., Münck, E., Lipscomb, J. D., and Que, L., Jr. (1997) Science 275, 515-518.
42. Lee, D., Pierce, B., Krebs, C., Hendrich, M. P., Huynh, B. H., and Lippard, S. J. (2002) J. Am. Chem. Soc. 124, 3993-4007.
43. Brown, C. A., Pavlosky, M. A., Westre, T. E., Zhang, Y., Hedman, B., Hodgson, K. O., and Solomon, E. I. (1995) J. Am. Chem. Soc. 117, 715-732.
44. Meyer-Klaucke, W., Winkler, H., Schünemann, V., Trautwein, A. X., Nolting, H. F., and Haavik, J. (1996) Eur. J. Biochem. 241, 432-439.
45. Dutta, S., Peng, S.-M., and Bhattacharya, S. (2000) Inorg. Chem. 39, 2231-2234.
46. Barbaro, P., Bianchini, C., Linn, K., Mealli, C., Meli, A., Vizza, F., Laschi, F., and Zanello, P. (1992) Inorg. Chim. Acta 198-200, 31-56.
47. Barbaro, P., Bianchini, C., Mealli, C., and Meli, A. (1991) J. Am. Chem. Soc. 113, 3181-3183.