The Set2 histone methyltransferase functions through the phosphorylated carboxyl-terminal domain of RNA polymerase II

Journal of Biological Chemistry

Volumn 278, Issue 11, 2003, Pages 8897-8903

  Li, Bing ^a   Howe, LeAnn ^a   Anderson, Scott ^b   Yates III, John R ^b   Workman, Jerry L ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MASS SPECTROMETRY; PROTEINS; PURIFICATION; RNA;

METHYLATION;

BIOCHEMISTRY;

AZAURACIL; ELONGATION FACTOR; HISTONE METHYLTRANSFERASE; METHYLTRANSFERASE; PROTEIN SET2; RNA POLYMERASE II; SYNTHETIC PEPTIDE; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG; ANTIMETABOLITE; DRUG DERIVATIVE; FUNGAL PROTEIN; HISTONE; LYSINE; PEPTIDE; SACCHAROMYCES CEREVISIAE PROTEIN; SET2 PROTEIN, S CEREVISIAE; URACIL;

ARTICLE; CARBOXY TERMINAL SEQUENCE; COMPLEX FORMATION; ENZYME MECHANISM; GENE DELETION; IMMUNOBLOTTING; IMMUNOPRECIPITATION; IN VIVO STUDY; MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTEIN METHYLATION; PROTEIN PHOSPHORYLATION; PROTEIN PURIFICATION; TRANSCRIPTION REGULATION; CHEMISTRY; DNA METHYLATION; GENETIC TRANSCRIPTION; METABOLISM; MUTATION; PHOSPHORYLATION; PHYSIOLOGY; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN BINDING; PROTEIN TERTIARY STRUCTURE; SERODIAGNOSIS;

ANTIMETABOLITES; DNA METHYLATION; ELECTROPHORESIS, POLYACRYLAMIDE GEL; FUNGAL PROTEINS; GENE DELETION; HISTONES; IMMUNOBLOTTING; LYSINE; METHYLTRANSFERASES; MUTATION; PEPTIDES; PHOSPHORYLATION; PRECIPITIN TESTS; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; PROTEIN STRUCTURE, TERTIARY; RNA POLYMERASE II; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSCRIPTION, GENETIC; URACIL;

EID: 0037512273     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M212134200     Document Type: Article

References (86)

1. Workman, J. L., and Kingston, R. E. (1998) Annu. Rev. Biochem. 67, 545-579
2. Vignali, M., Hassan, A. H., Neely, K. E., and Workman, J. L. (2000) Mol. Cell. Biol. 20, 1899-1910
3. Jenuwein, T., and Allis, C. D. (2001) Science 293, 1074-1080
4. Berger, S. L. (2002) Curr. Opin. Genet. Dev. 12, 142-148
5. Luger, K., Mader, A. W., Richmond, R. K., Sargent, D. F., and Richmond, T. J. (1997) Nature 389, 251-260
6. Strahl, B. D., and Allis, C. D. (2000) Nature 403, 41-45
7. Kouzarides, T. (2002) Curr. Opin. Genet. Dev. 12, 198-209
8. Peterson, C. L., and Workman, J. L. (2000) Curr. Opin. Genet. Dev. 10, 187-192
9. Natarajan, K., Jackson, B. M., Zhou, H., Winston, F., and Hinnebusch, A. G. (1999) Mol Cell 4, 657-664
10. Brown, C. E., Howe, L., Sousa, K., Alley, S. C., Carrozza, M. J., Tan, S., and Workman, J. L. (2001) Science 292, 2333-2337
11. Neely, K. E., Hassan, A. H., Wallberg, A. E., Steger, D. J., Cairns, B. R., Wright, A. P., and Workman, J. L. (1999) Mol. Cell 4, 649-655
12. Yudkovsky, N., Logie, C., Hahn, S., and Peterson, C. L. (1999) Genes Dev. 13, 2369-2374
13. Watson, A. D., Edmondson, D. G., Bone, J. R., Mukai, Y., Yu, Y., Du, W., Stillman, D. J., and Roth, S. Y. (2000) Genes Dev. 14, 2737-2744
14. Vogelauer, M., Wu, J., Suka, N., and Grunstein, M. (2000) Nature 408, 495-498
15. Kadosh, D., and Struhl, K. (1998) Mol. Cell. Biol. 18, 5121-5127
16. Rundlett, S. E., Carmen, A. A., Suka, N., Turner, B. M., and Grunstein, M. (1998) Nature 392, 831-835
17. Kadosh, D., and Struhl, K. (1997) Cell 89, 365-371
18. Hassan, A. H., Neely, K. E., and Workman, J. L. (2001) Cell 104, 817-827
19. Hassan, A. H., Prochasson, P., Neely, K. E., Galasinski, S. C., Chandy, M., Carrozza, M. J., and Workman, J. L. (2002) Cell 111, 369-379
20. Lo, W. S., Duggan, L., Tolga, N. C., Emre, Belotserkovskya, R., Lane, W. S., Shiekhattar, R., and Berger, S. L. (2001) Science 293, 1142-1146
21. Lo, W. S., Trievel, R. C., Rojas, J. R., Duggan, L., Hsu, J. Y., Allis, C. D., Marmorstein, R., and Berger, S. L. (2000) Mol. Cell 5, 917-926
22. Ng, H. H., Xu, R. M., Zhang, Y., and Struhl, K. (2002) J. Biol. Chem. 277, 34655-34657
23. Briggs, S. D., Xiao, T., Sun, Z. W., Caldwell, J. A., Shabanowitz, J., Hunt, D. F., Allis, C. D., and Strahl, B. D. (2002) Nature 418, 498
24. Sun, Z. W., and Allis, C. D. (2002) Nature 418, 104-108
25. Kobor, M., and Greenblatt, J. (2002) Biochim. Biophys. Acta 1577, 261-275
26. Conaway, J. W., Shilatifard, A., Dvir, A., and Conaway, R. C. (2000) Trends Biochem. Sci. 25, 375-380
27. Carlson, M. (1997) Annu. Rev. Cell. Dev. Biol. 13, 1-23
28. Kim, Y. J., Bjorklund, S., Li, Y., Sayre, M. H., and Kornberg, R. D. (1994) Cell 77, 599-608
29. Usheva, A., Maldonado, E., Goldring, A., Lu, H., Houbavi, C., Reinberg, D., and Aloni, Y. (1992) Cell 69, 871-881
30. Lu, H., Flores, O., Weinmann, R., and Reinberg, D. (1991) Proc. Natl. Acad. Sci. U. S. A. 88, 10004-10008
31. Cho, E. J., Takagi, T., Moore, C. R., and Buratowski, S. (1997) Genes Dev. 11, 3319-3326
32. Proudfoot, N. J., Furger, A., and Dye, M. J. (2002) Cell 108, 501-512
33. Corden, J. L., and Patturajan, M. (1997) Trends Biochem. Sci. 22, 413-416
34. Cismowski, M. J., Laff, G. M., Solomon, M. J., and Reed, S. I. (1995) Mol. Cell. Biol. 15, 2983-2992
35. Feaver, W. J., Svejstrup, J. Q., Henry, N. L., and Kornberg, R. D. (1994) Cell 79, 1103-1109
36. Liao, S. M., Taylor, I. C., Kingston, R. E., and Young, R. A. (1991) Genes Dev. 5, 2431-2440
37. Liao, S. M., Zhang, J., Jeffery, D. A., Koleske, A. J., Thompson, C. M., Chao, D. M., Viljoen, M., van Vuuren, H. J., and Young, R. A. (1995) Nature 374, 193-196
38. Lee, J. M., and Greenleaf, A. L. (1991) Gene Expr. 1, 149-167
39. Murray, S., Udupa, R., Yao, S., Hartzog, G., and Prelich, G. (2001) Mol. Cell. Biol. 21, 4089-4096
40. Kobor, M. S., Archambault, J., Lester, W., Holstege, F. C., Gileadi, O., Jansma, D. B., Jennings, E. G., Kouyoumdjian, F., Davidson, A. R., Young, R. A., and Greenblatt, J. (1999) Mol. Cell 4, 55-62
41. Svejstrup, J. Q., Li, Y., Fellows, J., Gnatt, A., Bjorklund, S., and Kornberg, R. D. (1997) Proc. Natl. Acad. Sci. U. S. A. 94, 6075-6078
42. Komarnitsky, P., Cho, E. J., and Buratowski, S. (2000) Genes Dev. 14, 2452-2460
43. Wittschieben, B. O., Otero, G., de Bizemont, T., Fellows, J., Erdjument-Bromage, H., Ohba, R., Li, Y., Allis, C. D., Tempst, P., and Svejstrup, J. Q. (1999) Mol. Cell 4, 123-128
44. Cho, H., Orphanides, G., Sun, X., Yang, X. J., Ogryzko, V., Lees, E., Nakatani, Y., and Reinberg, D. (1998) Mol. Cell. Biol. 18, 5355-5363
45. Zhang, Y., and Reinberg, D. (2001) Genes Dev. 15, 2343-2360
46. Rea, S., Eisenhaber, F., O'Carroll, D., Strahl, B. D., Sun, Z. W., Schmid, M., Opravil, S., Mechtler, K., Ponting, C. P., Allis, C. D., and Jenuwein, T. (2000) Nature 406, 593-599
47. Santos-Rosa, H., Schneider, R., Bannister, A. J., Sherriff, J., Bernstein, B. E., Emre, N. C., Schreiber, S. L., Mellor, J., and Kouzarides, T. (2002) Nature 419, 407-411
48. Strahl, B. D., Grant, P. A., Briggs, S. D., Sun, Z. W., Bone, J. R., Caldwell, J. A., Mollah, S., Cook, R. G., Shabanowitz, J., Hunt, D. F., and Allis, C. D. (2002) Mol. Cell. Biol. 22, 1298-1306
49. Roguev, A., Schaft, D., Shevchenko, A., Pijnappel, W. W., Wilm, M., Aasland, R., and Stewart, A. F. (2001) EMBO J. 20, 7137-7148
50. Nagy, P. L., Griesenbeck, J., Kornberg, R. D., and Cleary, M. L. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 90-94
51. Miller, T., Krogan, N. J., Dover, J., Erdjument-Bromage, H., Tempst, P., Johnston, M., Greenblatt, J. F., and Shilatifard, A. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 12902-12907
52. Feng, Q., Wang, H., Ng, H. H., Erdjument-Bromage, H., Tempst, P., Struhl, K., and Zhang, Y. (2002) Curr. Biol. 12, 1052-1058
53. Lacoste, N., Utley, R. T., Hunter, J. M., Poirier, G. G., and Cote, J. (2002) J. Biol. Chem. 277, 30421-30424
54. van Leeuwen, F., Gafken, P. R., and Gottschling, D. E. (2002) Cell 109, 745-756
55. Ng, H. H., Feng, Q., Wang, H., Erdjument-Bromage, H., Tempst, P., Zhang, Y., and Struhl, K. (2002) Genes Dev. 16, 1518-1527
56. Li, J., Moazed, D., and Gygi, S. P. (2002) J. Biol. Chem. 277, 49383-49388
57. Strahl, B. D., Briggs, S. D., Brame, C. J., Caldwell, J. A., Koh, S. S., Ma, H., Cook, R. G., Shabanowitz, J., Hunt, D. F., Stallcup, M. R., and Allis, C. D. (2001) Curr. Biol. 11, 996-1000
58. Ma, H., Baumann, C. T., Li, H., Strahl, B. D., Rice, R., Jelinek, M. A., Aswad, D. W., Allis, C. D., Hager, G. L., and Stallcup, M. R. (2001) Curr. Biol. 11, 1981-1985
59. Puig, O., Caspary, F., Rigaut, G., Rutz, B., Bouveret, E., Bragado-Nilsson, E., Wilm, M., and Seraphin, B. (2001) Methods 24, 218-229
60. Rigaut, G., Shevchenko, A., Rutz, B., Wilm, M., Mann, M., and Seraphin, B. (1999) Nat. Biotechnol. 17, 1030-1032
61. Davie, J. K., and Kane, C. M. (2000) Mol. Cell. Biol. 20, 5960-5973
62. West, M. L., and Corden, J. L. (1995) Genetics 140, 1223-1233
63. Grant, P. A., Duggan, L., Cote, J., Roberts, S. M., Brownell, J. E., Candau, R., Ohba, R., Owen-Hughes, T., Allis, C. D., Winston, F., Berger, S. L., and Workman, J. L. (1997) Genes Dev. 11, 1640-1650
64. Grant, P. A., Berger, S. L., and Workman, J. L. (1999) Methods Mol. Biol. 119, 311-317
65. Cho, E. J., Kobor, M. S., Kim, M., Greenblatt, J., and Buratowski, S. (2001) Genes Dev. 15, 3319-3329
66. Edwards, A. M., Darst, S. A., Feaver, W. J., Thompson, N. E., Burgess, R. R., and Kornberg, R. D. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 2122-2126
67. Myers, L. C., Leuther, K., Bushnell, D. A., Gustafsson, C. M., and Kornberg, R. D. (1997) Methods 12, 212-216
68. Donaldson, I. M., and Friesen, J. D. (2000) J. Biol. Chem. 275, 13780-13788
69. Mueller, C. L., and Jaehning, J. A. (2002) Mol. Cell. Biol. 22, 1971-1980
70. Ho, C. K., and Shuman, S. (1999) Mol. Cell 3, 405-411
71. Nonet, M., Sweetser, D., and Young, R. A. (1987) Cell 50, 909-915
72. Reines, D., Conaway, R. C., and Conaway, J. W. (1999) Curr. Opin. Cell Biol. 11, 342-346
73. Wind, M., and Reines, D. (2000) BioEssays 22, 327-336
74. Exinger, F., and Lacroute, F. (1992) Curr. Genet. 22, 9-11
75. Otero, G., Fellows, J., Li, Y., de Bizemont, T., Dirac, A. M., Gustafsson, C. M., Erdjument-Bromage, H., Tempst, P., and Svejstrup, J. Q. (1999) Mol. Cell 3, 109-118
76. Bernstein, B. E., Humphrey, E. L., Erlich, R. L., Schneider, R., Bouman, P., Liu, J. S., Kouzarides, T., and Schreiber, S. L. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 8695-8700
77. Studitsky, V. M., Clark, D. J., and Felsenfeld, G. (1995) Cell 83, 19-27
78. Studitsky, V. M., Kassavetis, G. A., Geiduschek, E. P., and Felsenfeld, G. (1997) Science 278, 1960-1963
79. Beisel, C., Imhof, A., Greene, J., Kremmer, E., and Sauer, F. (2002) Nature 419, 857-862
80. Nishioka, K., Chuikov, S., Sarma, K., Erdjument-Bromage, H., Allis, C. D., Tempst, P., and Reinberg, D. (2002) Genes Dev. 16, 479-489
81. Zegerman, P., Canas, B., Pappin, D., and Kouzarides, T. (2002) J. Biol. Chem. 277, 11621-11624
82. Peterson, C. L. (2002) Mol. Cell 9, 921-922
83. Bannister, A. J., Schneider, R., and Kouzarides, T. (2002) Cell 109, 801-806
84. Davie, J. K., and Dent, S. Y. (2002) Curr. Biol. 12, R59-R61
85. Nielsen, S. J., Schneider, R., Bauer, U. M., Bannister, A. J., Morrison, A., O'Carroll, D., Firestein, R., Cleary, M., Jenuwein, T., Herrera, R. E., and Kouzarides, T. (2001) Nature 412, 561-565
86. Bauer, U. M., Daujat, S., Nielsen, S. J., Nightingale, K., and Kouzarides, T. (2002) EMBO J. 3, 39-44