-
1
-
-
0031954925
-
Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms
-
Wallin, E. & Von Heijne, G. Genome-wide analysis of integral membrane proteins from eubacterial, archaean, and eukaryotic organisms. Protein Sci. 7, 1029-1038 (1998).
-
(1998)
Protein Sci.
, vol.7
, pp. 1029-1038
-
-
Wallin, E.1
Von Heijne, G.2
-
2
-
-
0034213573
-
Do more complex organisms have a greater proportion of membrane proteins in their genomes?
-
Stevens, T.J. & Arkin, I.T. Do more complex organisms have a greater proportion of membrane proteins in their genomes? Proteins 39, 417-420 (2000).
-
(2000)
Proteins
, vol.39
, pp. 417-420
-
-
Stevens, T.J.1
Arkin, I.T.2
-
4
-
-
0035987407
-
The post-genomic era of interactive proteomics: Facts and perspectives
-
Auerbach, D., Thaminy, S., Hottiger, M.O. & Stagljar, I. The post-genomic era of interactive proteomics: facts and perspectives. Proteomics 2, 611-623 (2002).
-
(2002)
Proteomics
, vol.2
, pp. 611-623
-
-
Auerbach, D.1
Thaminy, S.2
Hottiger, M.O.3
Stagljar, I.4
-
5
-
-
0037305948
-
Peptide libraries: At the crossroads of proteomics and bioinformatics
-
Turk, B.E. & Cantley. L.C. Peptide libraries: at the crossroads of proteomics and bioinformatics. Curr. Opin. Chem. Biol. 7, 84-90 (2003).
-
(2003)
Curr. Opin. Chem. Biol.
, vol.7
, pp. 84-90
-
-
Turk, B.E.1
Cantley, L.C.2
-
6
-
-
0036789265
-
Analyzing yeast protein-protein interaction data obtained from different sources
-
Bader G.D. & Hogue C.W. Analyzing yeast protein-protein interaction data obtained from different sources. Nat. Biotechnol. 20, 991-997 (2002).
-
(2002)
Nat. Biotechnol.
, vol.20
, pp. 991-997
-
-
Bader, G.D.1
Hogue, C.W.2
-
7
-
-
0033778077
-
Membrane proteomics: Use of additive main effects with multiplicative interaction model to classify plasma membrane proteins according to their solubility and electrophoretic properties
-
Santoni, V., Kieffer, S., Desclaux, D., Masson, F. & Rabilloud, T. Membrane proteomics: use of additive main effects with multiplicative interaction model to classify plasma membrane proteins according to their solubility and electrophoretic properties. Electrophoresis 21, 3329-3344 (2000).
-
(2000)
Electrophoresis
, vol.21
, pp. 3329-3344
-
-
Santoni, V.1
Kieffer, S.2
Desclaux, D.3
Masson, F.4
Rabilloud, T.5
-
8
-
-
0034066471
-
Membrane proteins and proteomics: Un amour impossible?
-
Santoni, V., Malloy, M. & Rabilloud, T. Membrane proteins and proteomics: un amour impossible? Electrophoresis 21, 1054-1070 (2000).
-
(2000)
Electrophoresis
, vol.21
, pp. 1054-1070
-
-
Santoni, V.1
Malloy, M.2
Rabilloud, T.3
-
9
-
-
0037143630
-
Integral membrane proteins of the chloroplast envelope: Identification and subcellular localization of new transporters
-
Ferro, M. et al. Integral membrane proteins of the chloroplast envelope: identification and subcellular localization of new transporters. Proc. Natl. Acad. Sci. USA 99, 11487-11492 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 11487-11492
-
-
Ferro, M.1
-
10
-
-
0033773868
-
Organic solvent extraction as a versatile procedure to identify hydrophobic chloroplast membrane proteins
-
Ferro, M. et al. Organic solvent extraction as a versatile procedure to identify hydrophobic chloroplast membrane proteins. Electrophoresis 21, 3517-3526 (2002).
-
(2002)
Electrophoresis
, vol.21
, pp. 3517-3526
-
-
Ferro, M.1
-
11
-
-
12244289683
-
Proteomic analysis of rat brain tissue: Comparison of protocols for two-dimensional gel electrophoresis analysis based on different solubilizing agents
-
Carboni, L., Piubelli, C., Righetti, P.G., Jansson, B. & Domenici, E. Proteomic analysis of rat brain tissue: comparison of protocols for two-dimensional gel electrophoresis analysis based on different solubilizing agents. Electrophoresis 23, 4132-4141 (2002).
-
(2002)
Electrophoresis
, vol.23
, pp. 4132-4141
-
-
Carboni, L.1
Piubelli, C.2
Righetti, P.G.3
Jansson, B.4
Domenici, E.5
-
12
-
-
0036857488
-
Application of zwitterionic detergents to the solubilization of integral membrane proteins for two-dimensional gel electrophoresis and mass spectrometry
-
Henningsen, R., Gale, B.L., Straub, K.M. & DeNagel, D.C. Application of zwitterionic detergents to the solubilization of integral membrane proteins for two-dimensional gel electrophoresis and mass spectrometry. Proteomics 2, 1479-1488 (2002).
-
(2002)
Proteomics
, vol.2
, pp. 1479-1488
-
-
Henningsen, R.1
Gale, B.L.2
Straub, K.M.3
DeNagel, D.C.4
-
13
-
-
0035987523
-
Comparison of one-dimensional and two-dimensional gel electrophoresis as a separation tool for proteomic analysis of rat liver microsomes: Cytochromes P450 and other membrane proteins
-
Galeva, N. & Altermann, M. Comparison of one-dimensional and two-dimensional gel electrophoresis as a separation tool for proteomic analysis of rat liver microsomes: cytochromes P450 and other membrane proteins. Proteomics 2, 713-722 (2002).
-
(2002)
Proteomics
, vol.2
, pp. 713-722
-
-
Galeva, N.1
Altermann, M.2
-
14
-
-
0034120122
-
Proteomic analysis of the human colon carcinoma cell line (LIM 1215): Development of a membrane protein database
-
Simpson, R.J. et al. Proteomic analysis of the human colon carcinoma cell line (LIM 1215): Development of a membrane protein database. Electrophoresis 21, 1707-1732 (2000).
-
(2000)
Electrophoresis
, vol.21
, pp. 1707-1732
-
-
Simpson, R.J.1
-
15
-
-
0036668515
-
High throughput two-dimensional blue-native electrophoresis: A tool for functional proteomics of mitochondria and signaling complexes
-
Brookes, P.S. et al. High throughput two-dimensional blue-native electrophoresis: a tool for functional proteomics of mitochondria and signaling complexes. Proteomics 2, 969-977 (2002).
-
(2002)
Proteomics
, vol.2
, pp. 969-977
-
-
Brookes, P.S.1
-
16
-
-
0036668062
-
Mass spectrometric identification of mitochondrial oxidative phosphorylation subunits separated by two-dimensional blue-native polyacrylamide gel electrophoresis
-
Devreese, B., Vanrobaeys, F., Smet, J., Van Beeumen, J. & Van Coster, R. Mass spectrometric identification of mitochondrial oxidative phosphorylation subunits separated by two-dimensional blue-native polyacrylamide gel electrophoresis. Electrophoresis 23, 2525-2533 (2002).
-
(2002)
Electrophoresis
, vol.23
, pp. 2525-2533
-
-
Devreese, B.1
Vanrobaeys, F.2
Smet, J.3
Van Beeumen, J.4
Van Coster, R.5
-
17
-
-
0033662185
-
Postelectrophoretic staining of proteins separated by two-dimensional gel electrophoresis using SYPRO dyes
-
Yan, J.X., Harry, R.A., Spibey, C. & Dunn, M.J. Postelectrophoretic staining of proteins separated by two-dimensional gel electrophoresis using SYPRO dyes. Electrophoresis 21, 3657-3665 (2000).
-
(2000)
Electrophoresis
, vol.21
, pp. 3657-3665
-
-
Yan, J.X.1
Harry, R.A.2
Spibey, C.3
Dunn, M.J.4
-
18
-
-
0035403371
-
A new silver staining apparatus and procedure for matrix-assisted laser desorption/ionization-time of flight analysis of proteins after two-dimensional electrophoresis
-
Sinha, R, Poland, J., Schnolzer, M. & Rabilloud, T. A new silver staining apparatus and procedure for matrix-assisted laser desorption/ionization-time of flight analysis of proteins after two-dimensional electrophoresis. Proteomics 1, 835-840 (2001).
-
(2001)
Proteomics
, vol.1
, pp. 835-840
-
-
Sinha, R.1
Poland, J.2
Schnolzer, M.3
Rabilloud, T.4
-
19
-
-
0036127937
-
Improved in-gel approaches to generate peptide maps of integral membrane proteins with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
-
van Montfort, B.A., Canas, B., Duurkens, R., Godovac-Zimmermann, J. & Robillard, G.T. Improved in-gel approaches to generate peptide maps of integral membrane proteins with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. J. Mass Spectrom. 37, 322-330 (2002).
-
(2002)
J. Mass Spectrom.
, vol.37
, pp. 322-330
-
-
Van Montfort, B.A.1
Canas, B.2
Duurkens, R.3
Godovac-Zimmermann, J.4
Robillard, G.T.5
-
20
-
-
0037056021
-
Combined in-gel tryptic digestion and CNBr cleavage for the generation of peptide maps of an integral membrane protein with MALDI-TOF mass spectrometry
-
van Montfort, B.A. et al. Combined in-gel tryptic digestion and CNBr cleavage for the generation of peptide maps of an integral membrane protein with MALDI-TOF mass spectrometry. Biochem. Biophys. Acta 1555, 111-115 (2002).
-
(2002)
Biochem. Biophys. Acta
, vol.1555
, pp. 111-115
-
-
Van Montfort, B.A.1
-
21
-
-
0034789979
-
Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry
-
Han, D.K., Eng, J., Zhou, H., & Aebersold, R. Quantitative profiling of differentiation-induced microsomal proteins using isotope-coded affinity tags and mass spectrometry. Nat. Biotechnol. 19, 946-951 (2002).
-
(2002)
Nat. Biotechnol.
, vol.19
, pp. 946-951
-
-
Han, D.K.1
Eng, J.2
Zhou, H.3
Aebersold, R.4
-
22
-
-
0036665518
-
Enrichment of integral membrane proteins for proteomic analysis using liquid chromatography-tandem mass spectrometry
-
Blonder, J., Goshe, M.B., Moore, R.J., Pasa-Tolic, L., Masselon, C.D., Lipton, M.S. & Smith, R.D. Enrichment of integral membrane proteins for proteomic analysis using liquid chromatography-tandem mass spectrometry. J. Prot. Res. 1, 351-360 (2002).
-
(2002)
J. Prot. Res.
, vol.1
, pp. 351-360
-
-
Blonder, J.1
Goshe, M.B.2
Moore, R.J.3
Pasa-Tolic, L.4
Masselon, C.D.5
Lipton, M.S.6
Smith, R.D.7
-
23
-
-
0012253253
-
Affinity labeling of highly hydrophobic integral membrane proteins for proteome-wide analysis
-
in press
-
Goshe, M.B., Blonder, J., & Smith, R.D. Affinity labeling of highly hydrophobic integral membrane proteins for proteome-wide analysis. J. Prot. Res., in press (2003).
-
(2003)
J. Prot. Res.
-
-
Goshe, M.B.1
Blonder, J.2
Smith, R.D.3
-
24
-
-
0035106351
-
Large-scale analysis of the yeast proteome by multidimensional protein identification technology
-
Washburn, M.P., Wolters,D. & Yates III, J.R. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat. Biotechnol. 19, 242-247 (2001).
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 242-247
-
-
Washburn, M.P.1
Wolters, D.2
Yates J.R. III3
-
25
-
-
0036246088
-
Quantitative proteome analysis by solid-phase isotope tagging and mass spectrometry
-
Zhou, H., Ranish, J.A., Watts, J.D., & Aebersold, R. Quantitative proteome analysis by solid-phase isotope tagging and mass spectrometry. Nat. Biotechnol. 20, 512-515 (2002).
-
(2002)
Nat. Biotechnol.
, vol.20
, pp. 512-515
-
-
Zhou, H.1
Ranish, J.A.2
Watts, J.D.3
Aebersold, R.4
-
26
-
-
0038561131
-
A method for the comprehensive proteomicanalysis of membrane proteins: Identification, modifications, and topology
-
in press
-
Wu, C.C., MacCoss, M.J., Howell, K.E. & Yates III, J.R. A method for the comprehensive proteomic analysis of membrane proteins: identification, modifications, and topology. Nat. Biotechnol., in press (2003).
-
(2003)
Nat. Biotechnol.
-
-
Wu, C.C.1
MacCoss, M.J.2
Howell, K.E.3
Yates J.R. III4
-
27
-
-
0020071663
-
Hepatic Golgi fractions resolved into membrane and content subfractions
-
Howell, K.E. & Palade, G.E. Hepatic Golgi fractions resolved into membrane and content subfractions. J. Cell Biol. 92, 822-832 (1982).
-
(1982)
J. Cell Biol.
, vol.92
, pp. 822-832
-
-
Howell, K.E.1
Palade, G.E.2
-
28
-
-
0002739166
-
Posttranslational modifications
-
Angeletti, R.H. (ed.). Academic Press, San Diego, CA
-
Gudepu, R.G. & Wold, F. Posttranslational modifications. in Proteins: Analysis and Design. Angeletti, R.H. (ed.). 121-207 (Academic Press, San Diego, CA; 1998).
-
(1998)
Proteins: Analysis and Design
, pp. 121-207
-
-
Gudepu, R.G.1
Wold, F.2
-
29
-
-
0034681905
-
Proteomics on full-length membrane proteins using mass spectrometry
-
le Coutre, J. et al. Proteomics on full-length membrane proteins using mass spectrometry. Biochemistry 39, 4237-4242 (2000).
-
(2000)
Biochemistry
, vol.39
, pp. 4237-4242
-
-
Le Coutre, J.1
-
30
-
-
0012252011
-
Full subunit converage liquid chromatography electrospray ionization mass spectrometry (LCMS+) of an oligomeric membrane protein
-
Whitelegge, J.P., Zhang, H., Aguilera, R., Taylor, R.M. & Cramer, W.A. Full subunit converage liquid chromatography electrospray ionization mass spectrometry (LCMS+) of an oligomeric membrane protein. Mol. Cell. Proteomics 1, 816-827 (2002).
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 816-827
-
-
Whitelegge, J.P.1
Zhang, H.2
Aguilera, R.3
Taylor, R.M.4
Cramer, W.A.5
-
31
-
-
0036051481
-
The chloroplast grana defined by intact mass measurements from liquid chromatography mass spectrometry
-
Gómez, S.M., Nishio, J.N., Faull, K.F. & Whitelegge, J.P. The chloroplast grana defined by intact mass measurements from liquid chromatography mass spectrometry. Mol. Cell. Proteomics 1, 46-59 (2002).
-
(2002)
Mol. Cell. Proteomics
, vol.1
, pp. 46-59
-
-
Gómez, S.M.1
Nishio, J.N.2
Faull, K.F.3
Whitelegge, J.P.4
-
32
-
-
0034669677
-
A robust, detergent-friendly method for mass spectrophometric analysis of integral membrane proteins
-
Cadene, M. & Chait, B.T. A robust, detergent-friendly method for mass spectrophometric analysis of integral membrane proteins. Anal. Chem. 72, 5655-5658 (2000).
-
(2000)
Anal. Chem.
, vol.72
, pp. 5655-5658
-
-
Cadene, M.1
Chait, B.T.2
-
33
-
-
0036645727
-
Processing complex mixtures of intact proteins for direct analysis by mass spectrometry
-
Meng, F., Cargile, B.J., Patri, S.M., Johnson, J.R., McLoughlin, S.M. & Kelleher, N.L. Processing complex mixtures of intact proteins for direct analysis by mass spectrometry. Anal. Chem. 74, 2923-2929 (2002).
-
(2002)
Anal. Chem.
, vol.74
, pp. 2923-2929
-
-
Meng, F.1
Cargile, B.J.2
Patri, S.M.3
Johnson, J.R.4
McLoughlin, S.M.5
Kelleher, N.L.6
-
34
-
-
0035067251
-
Enrichment analysis of phosphorylated proteins as a tool for probing the phosphoproteome
-
Oda, Y., Nagasu, T. & Chait, B.D. Enrichment analysis of phosphorylated proteins as a tool for probing the phosphoproteome. Nat. Biotechnol. 19, 379-382 (2001).
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 379-382
-
-
Oda, Y.1
Nagasu, T.2
Chait, B.D.3
-
35
-
-
0035072715
-
A systematic approach to the analysis of protein phosphorylation
-
Zhou, H., Watts, J.D. & Aebersold, R. A systematic approach to the analysis of protein phosphorylation. Nat. Biotechnol. 19, 375-378 (2001).
-
(2001)
Nat. Biotechnol.
, vol.19
, pp. 375-378
-
-
Zhou, H.1
Watts, J.D.2
Aebersold, R.3
-
36
-
-
0035356565
-
Phosphoprotein isotope-coded affinity tag approach for isolating and quantitating phosphopeptides in proteome-wide analysis
-
Goshe, M.B. et al. Phosphoprotein isotope-coded affinity tag approach for isolating and quantitating phosphopeptides in proteome-wide analysis. Anal. Chem. 73, 2578-2586 (2001).
-
(2001)
Anal. Chem.
, vol.73
, pp. 2578-2586
-
-
Goshe, M.B.1
-
37
-
-
0036198435
-
Phosphoproteome analysis by mass spectrometry and its application to Saccaromyces cerevisiae
-
Ficarro, S.B. et al. Phosphoproteome analysis by mass spectrometry and its application to Saccaromyces cerevisiae. Nat. Biotechnol. 20, 301-305 (2002).
-
(2002)
Nat. Biotechnol.
, vol.20
, pp. 301-305
-
-
Ficarro, S.B.1
-
38
-
-
18444391517
-
Shotgun identification of protein modifications from protein complexes and lens tissue
-
MacCoss, M.J. et al. Shotgun identification of protein modifications from protein complexes and lens tissue. Proc. Natl. Acad. Sci. USA 99, 7900-7905 (2002).
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7900-7905
-
-
MacCoss, M.J.1
-
39
-
-
0035843079
-
Projection structure of a CICtype chloride channel at 6.5 Å resolution
-
Mindell, J.A., Maduke, M., Miller, C. & Grigorieff, N. Projection structure of a CICtype chloride channel at 6.5 Å resolution. Nature 409, 219-223 (2002).
-
(2002)
Nature
, vol.409
, pp. 219-223
-
-
Mindell, J.A.1
Maduke, M.2
Miller, C.3
Grigorieff, N.4
|