The SWI/SNF family of ATP-dependent chromatin remodelers: Similar mechanisms for diverse functions

Current Topics in Microbiology and Immunology

Volumn 274, Issue , 2003, Pages 143-169

  Wang, W ^a  

^a NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; DNA; PROTEIN; PROTEIN SUBUNIT; PROTEIN SWI; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR SNF; UNCLASSIFIED DRUG;

ARABIDOPSIS; CAENORHABDITIS ELEGANS; CANCER INHIBITION; CELL GROWTH; CHROMATIN STRUCTURE; DNA METABOLISM; DNA REPLICATION; DNA TRANSCRIPTION; DROSOPHILA; ENERGY; ESCHERICHIA COLI; GENE ACTIVATION; GENE EXPRESSION REGULATION; HUMAN; HYDROLYSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DNA INTERACTION; PROTEIN FAMILY; PROTEIN FUNCTION; REVIEW; VIRUS DNA CELL DNA INTERACTION; YEAST;

ARABIDOPSIS; CAENORHABDITIS ELEGANS; ESCHERICHIA COLI;

EID: 0037238113     PISSN: 0070217X     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-3-642-55747-7_6     Document Type: Review

References (127)

1. ADLER HT, CHINERY R, Wu DY, KUSSICK SJ, PAYNE JM, FORNACE AJ, Jr, TKACHUK DC (1999) Mol Cell Biol 19:7050-60
2. ANGUS-HILL ML, SCHLICHTER A, ROBERTS D, ERDJUMENT-BROMAGE H, TEMPST P, CAIRNS BR (2001) Mol Cell 7:741-51
3. ARMSTRONG JA, BIEKER JJ, EMERSON BM (1998) Cell 95:93-104
4. BARKER N, HURLSTONE A, MUSISI, H, MILES A, BIENZ M, CLEVERS H (2001) Embo J 20:4935-43
5. BAZETT-JONES DP, COTE J, LANDEL CC, PETERSON CL, WORKMAN JL (1999) Mol Cell Biol 19:1470-8
6. BOCHAR DA, WANG L, BENIYA H, KINEV A, XUE Y, LANE WS, WANG W, KASHANCHI F, SHIEKHATTAR R (2000) Cell 102:257-65
7. BOURACHOT B,YANIV M, MUCHARDT C (1999) Mol Cell Biol 19:3931-9
8. BRIZUELA BJ, ELFRING L, BALLARD J, TAMKUN JW, KENNISON JA (1994) Genetics 137:803-13
9. BRZESKI J, PODSTOLSKI W, OLCZAK K, JERZMANOWSKI A (1999) Nucleic Acids Res 27:2393-9
10. BULTMAN S, GEBUHR T, YEE D, LA MANTIA C, NICHOLSON J, GILLIAM A, RANDAZZO F, METZGER D, CHAMBON P, CRABTREE G, MAGNUSON T (2000) Mol Cell 6: 1287-95
11. CAIRNS BR (2001) Trends Cell Biol 11:S15-21
12. CAIRNS BR, ERDJUMENT-BROMAGE H, TEMPST P, WINSTON F, KORNBERG RD (1998) Mol Cell 2:639-51
13. CAIRNS BR, HENRY NL, KORNBERG RD (1996a) Mol Cell Biol 16:3308-16
14. CAIRNS BR, KIM YJ, SAYRE MH, LAURENT BC, KORNBERG RD (1994) Proc Natl Acad Sci USA 91:1950-4
15. CAIRNS BR, LEVINSON RS, YAMAMOTO KR, KORNBERG RD (1996b) Genes Dev 10: 2131-44
16. CAIRNS BR, LORCH Y, LI Y, ZHANG M, LACOMIS L, ERDJUMENT-BROMAGE H, TEMPST P, DU J, LAURENT B, KORNBERG RD (1996C) Cell 87:1249-60
17. CAIRNS BR, SCHLICHTER A, ERDJUMENT-BROMAGE H, TEMPST P, KORNBERG RD, WINSTON F (1999) Mol Cell 4:715-23
18. CAO Y, CAIRNS BR, KORNBERG RD, LAURENT BC (1997) Mol Cell Biol 17:3323-34
19. CHENG SW, DAVIES KP, YUNG E, BELTRAN RJ, YU J, KALPANA GV (1999) Nat Genet 22:102-5
20. CHO H, ORPHANIDES G, SUN X, YANG Xj, OGRYZKO V, LEES E, NAKATANI Y, REINBERG D (1998) Mol Cell Biol 18:5355-63
21. COLLINS RT, FURUKAWA T, TANESE N, TREISMAN JE (1999) Embo J 18:7029-40
22. COLLINS RT, TREISMAN JE (2000) Genes Dev 14:3140-52
23. CORONA DF, LANGST G, CLAPIER CR, BONTE EJ, FERRARI S, TAMKUN JW, BECKER PB (1999) Mol Cell 3:239-45
24. COSMA MP, TANAKA T, NASMYTH K (1999) Cell 97:299-311
25. COTE J, PETERSON CL, WORKMAN JL (1998) Proc Natl Acad Sci USA 95:4947-52
26. COTE J, QUINN J, WORKMAN JL, PETERSON CL (1994) Science 265:53-60
27. CROSBY MA, MILLER C, ALON T, WATSON KL, VERRIJZER CP, GOLDMAN-LEVI R, ZAK NB (1999) Mol Cell Biol 19:1159-70
28. DALLAS PB, PACCHIONE S, WILSKER D, BOWRIN V, KOBAYASHI R, MORAN E (2000) Mol Cell Biol 20:3137-46
29. DHALLUIN C, CARLSON JE, ZENG L, HE C, AGGARWAL AK, ZHOU MM (1999) Nature 399:491-6
30. DIRENZO J, SHANG Y, PHELAN M, SIF S, MYERS M, KINGSTON R, BROWN M (2000) Mol Cell Biol 20:7541-9
31. DUNAIEF JL, STROBER BE, GUHA S, KHAVARI PA, ALIN K, LUBAN J, BEGEMANN M, CRABTREE GR, GOFF SP (1994) Cell 79:119-30
32. FLANAGAN JF, PETERSON CL (1999) Nucleic Acids Res 27:2022-8
33. FRYER CJ, ARCHER TK (1998) Nature 393:88-91
34. GALARNEAU L, NOURANI A, BOUDREAULT AA, ZHANG Y, HELIOT L, ALLARD S, SAVARD J, LANE WS, STILLMAN DJ, COTE J (2000) Mol Cell 5:927-37
35. GAVIN I, HORN PJ, PETERSON CL (2001) Mol Cell 7:97-104
36. HAMICHE A, SANDALTZOPOULOS R, GDULA DA, WU C (1999) Cell 97:833-42
37. HARATA M, OMA Y, MIZUNO S, JIANG YW, STILLMAN DJ, WINTERSBERGER U (1999) Mol Biol Cell 10:2595-605
38. HASSAN AH, NEELY KE, WORKMAN JL (2001) Cell 104:817-27
39. HAVAS K, FLAUS A, PHELAN M, KINGSTON R, WADE PA, LILLEY DM, OWEN-HUGHES T (2000) Cell 103:1133-42
40. HOLSTEGE FC, JENNINGS EG, WYRICK JJ, LEE TI, HENGARTNER CJ, GREEN M R, GOLUB TR, LANDER ES, YOUNG RA (1998) Cell 95:717-28
41. HOSOTANI T, KOYAMA H, UCHINO M, MIYAKAWA T, TSUCHIYA E (2001) Genes Cells 6:775-88
42. ICHINOSE H, GARNIER JM, CHAMBON P, LOSSON R (1997) Gene 188:95-100
43. IKURA T, OGRYZKO V, GRIGORIEV M, GROISMAN R, WANG J, HORIKOSHI M, SCULLY R, QIN J, NAKATANI Y (2000) Cell 102:463-73
44. IMBALZANO AN, KWON H, GREEN MR, KINGSTON RE (1994) Nature 370:481-5
45. KADAM S, MCALPINE GS, PHELAN ML, KINGSTON RE, JONES KA, EMERSON BM (2000) Genes Dev 14:2441-51
46. KAL AJ, MAHMOUDI T, ZAK NB, VERRIJZER CP (2000) Genes Dev 14:1058-71
47. KALPANA GV, MARMON S, WANG W, CRABTREE GR, GOFF SP (1994) Science 266:2002-6
48. KATO H, TJERNBERG A, ZHANG W, KRUTCHINSKY AN, AN W, TAKEUCHI T, OHTSUKI Y, SUGANO S, CHAIT BT, ROEDER RG (2001) J Biol Chem 4:4
49. KHAVARI PA, PETERSON CL, TAMKUN JW, MENDEL DB, CRABTREE GR (1993) Nature 366:170-4
50. KLOCHENDLER-YEIVIN A, FIETTE L, BARRA J, MUCHARDT C, BABINET C, YANIV M (2000) EMBO Rep 1:500-6
51. KORNBERG RD, LORCH Y (1999) Cell 98:285-94
52. KREBS JE, FRY CJ, SAMUELS ML, PETERSON CL (2000) Cell 102:587-98
53. KREBS JE, PETERSON CL (2000) Crit Rev Eukaryot Gene Expr 10:1-12
54. KRUDE T, JACKMAN M, PINES J, LASKEY RA (1997) Cell 88:109-19
55. KWON H, IMBALZANO AN, KHAVARI PA, KINGSTON RE, GREEN MR (1994) Nature 370:477-81
56. KWON J, MORSHEAD KB, GUYON JR, KINGSTON RE, OETTINGER MA (2000) Mol Cell 6: 1037-48
57. LEE D, SOHN H, KALPANA GV, CHOE J (1999) Nature 399:487-91
58. LEGOUY, E., THOMPSON, E. M., MUCHARDT C, RENARD JP (1998) Dev Dyn 212:38-48
59. LEMON B, INOUYE C, KING DS, TJIAN R (2001) Nature 414:924-8
60. LIU R, LIU H, CHEN X, KIRBY M, BROWN PO, ZHAO K (2001) Cell 106:309-18
61. LOGIE C, PETERSON CL (1997) Embo J 16:6772-82
62. LORCH Y, CAIRNS BR, ZHANG M, KORNBERG RD (1998) Cell 94:29-34
63. LORCH Y, ZHANG M, KORNBERG RD (1999) Cell 96:389-92
64. MILLER ME, CAIRNS BR, LEVINSON RS, YAMAMOTO KR, ENGEL DA, SMITH MM (1996) Mol Cell Biol 16:5737-43
65. MOREIRA JM, HOLMBERG S (1999) Embo J 18:2836-44
66. MOROZOV A, YUNG E, KALPANA GV (1998) Proc Natl Acad Sci USA 95:1120-5
67. MUCHARDT C,BOURACHOT B, REYES JC, YANIV M (1998) Embo J 17:223-31
68. MUCHARDT C, REYES JC, BOURACHOT B, LEGUOY E, YANIV M (1996) Embo J 15: 3394-402
69. MUCHARDT C,YANIV M (1993) Embo J 12:4279-90
70. MURPHY DJ, HARDY S, ENGEL DA (1999) Mol Cell Biol 19:2724-33
71. NEIGEBORN L, CARLSON M (1984) Genetics 108:845-58
72. NIE Z, XUE Y, YANG D, ZHOU S, DEROO BJ, ARCHER TK, WANG W (2000) Mol Cell Biol 20:8879-88
73. O'NEILL D, YANG J, ERDJUMENT-BROMAGE H, BORNSCHLEGEL K, TEMPST P, BANK A (1999) Proc Natl Acad Sci USA 96:349-54
74. O'NEILL DW, SCHOETZ SS, LOPEZ RA, CASTLE M, RABINOWITZ L, SHOR E, KRAWCHUK D, GOLL MG, RENZ M, SEELIG HP, HAN S, SEONG RH, PARK S D, AGALIOTI T, MUNSHI N, THANOS D, ERDJUMENT-BROMAGE H, TEMPST P, BANK A (2000) Mol Cell Biol 20:7572-82
75. OSTLUND FARRANTS AK, BLOMQUIST P, KWON H, WRANGE O (1997) Mol Cell Biol 17:895-905
76. OWEN-HUGHES T, UTLEY RT, COTE J, PETERSON CL, WORKMAN JL (1996) Science 273:513-6
77. PAPOULAS O, BEEK SJ, MOSELEY SL, MCCALLUM CM, SARTE M, SHEARN A, TAMKUN JW (1998) Development 125:3955-66
78. PETERSON CL, HERSKOWITZ I (1992) Cell 68:573-83
79. PETERSON CL, ZHAO Y, CHAIT BT (1998) J Biol Chem 273:23641-4
80. PHELAN ML, SIF S, NARLIKAR GJ, KINGSTON RE (1999) Mol Cell 3:247-53
81. QUINN J, FYRBERG AM, GANSTER RW, SCHMIDT MC, PETERSON CL (1996) Nature 379:844-7
82. REYES JC, BARRA J, MUCHARDT C, CAMUS A, BABINET C, YANIV M (1998) Embo J 17:6979-91
83. ROZENBLATT-ROSEN O, ROZOVSKAIA T, BURAKOV D, SEDKOV Y, TILLIB S, BLECHMAN J, NAKAMURA T, CROCE CM, MAZO A, CANAANI E (1998) Proc Natl Acad Sci USA 95:4152-7
84. SAWA H, KOUIKE H, OKANO H (2000) Mol Cell 6:617-24
85. SCHNITZLER G, SIF S, KINGSTON RE (1998) Cell 94:17-27
86. SCHNITZLER GR, CHEUNG CL, HAFNER JH, SAURIN AJ, KINGSTON RE, LIEBER CM (2001) Mol Cell Biol 21:8504-11
87. SHANAHAN F, SEGHEZZI W, PARRY D, MAHONY D, LEES E (1999) Mol Cell Biol 19:1460-9
88. SHAO Z, RAIBLE F, MOLLAAGHABABA R, GUYON JR, WU CT, BENDER W, KINGSTON RE (1999) Cell 98:37-46
89. SHEN X, MIZUGUCHI G, HAMICHE A, WU C (2000) Nature 406:541-4
90. SIF S, SAURIN AJ, IMBALZANO AN, KINGSTON RE (2001) Genes Dev 15:603-18
91. SIF S, STUKENBERG PT, KIRSCHNER MW, KINGSTON RE (1998) Genes Dev 12:2842-51
92. SINGH P, COE J, HONG W (1995) Nature 374:562-5
93. STAEHLING-HAMPTON K, CIAMPA PI, BROOK A, DYSON N (1999) Genetics 153:275-87
94. STERN M, JENSEN R, HERSKOWITZ I (1984) J Mol Biol 178:853-68
95. STRAHL BD, ALLIS CD (2000) Nature 403:41-5
96. STROBECK MW, DECRISTOFARO MF, BANINE F, WEISSMAN BE, SHERMAN LS, KNUDSEN ES (2001) J Biol Chem 276:9273-8
97. STROBECK MW, FRIBOURG AF, PUGA A, KNUDSEN ES (2000a) Oncogene 19:1857-67
98. STROBECK MW, KNUDSEN KE, FRIBOURG AF, DECRISTOFARO MF, WEISSMAN BE, IMBALZANO AN, KNUDSEN ES (2000b) Proc Natl Acad Sci USA 97:7748-53
99. SUDARSANAM P, IYER VR, BROWN PO, WINSTON F (2000) Proc Natl Acad Sci USA 97:3364-9
100. SUKHODOLETS MV, CABRERA JE, ZHI H, JIN DJ (2001) Genes Dev 15:3330-41
101. SUKHODOLETS MV, JIN DJ, (1998) J Biol Chem 273:7018-23
102. SUNG YH, CHOI EY, KWON H (2001) Mol Cells 11:75-81
103. TAMKUN JW, DEURING R, SCOTT MP, KISSINGER M, PATTATUCCI AM, KAUFMAN TC, KENNISON JA (1992) Cell 68:561-72
104. TREISMAN JE, LUK A, RUBIN GM, HEBERLEIN U (1997) Genes Dev 11:1949-62
105. TROUCHE D, LE CHALONY C, MUCHARDT C, YANIV M, KOUZARIDES T (1997) Proc Natl Acad Sci USA 94:11268-73
106. TSUCHIYA E, HOSOTANI T, MIYAKAWA T (1998) Nucleic Acids Res 26:3286-92
107. TURELLI P, DOUCAS V, CRAIG E, MANGEAT B, KLAGES N, EVANS R, KALPANA G, TRONO D (2001) Mol Cell 7:1245-54
108. UNDERHILL C, QUTOB MS, YEE SP, TORCHIA J (2000) J Biol Chem 275:40463-70
109. VAZQUEZ M, MOORE L, KENNISON JA (1999) Development 126:733-42
110. VERSTEEGE I, SEVENET N, LANGE J, ROUSSEAU-MERCK MF, AMBROS P, HANDGRETINGER R, AURIAS A, DELATTRE O (1998) Nature 394:203-6
111. VIGNALI M, HASSAN AH, NEELY KE, WORKMAN JL (2000) Mol Cell Biol 20:1899-910
112. WANG W, CHI T, XUE Y, ZHOU S, Kuo A, CRABTREE GR (1998) Proc Natl Acad Sci USA 95:492-8
113. WANG W, COTE J, XUE Y, ZHOU S, KHAVARI PA, BIGGAR SR, MUCHARDT C, KALPANA GV, GOFF SP, YANIV M, WORKMAN JL, CRABTREE GR (1996a) Embo J 15:5370-82
114. WANG W, XUE Y, ZHOU S, KUO A, CAIRNS BR, CRABTREE GR (1996b) Genes Dev 10:2117-30
115. WHITEHOUSE I, FLAUS A, CAIRNS BR, WHITE MF, WORKMAN JL, OWEN-HUGHES T (1999) Nature 400:784-7
116. WILSON CJ, CHAO DM, IMBALZANO AN, SCHNITZLER GR, KINGSTON RE, YOUNG RA (1996) Cell 84:235-44
117. WONG AK, SHANAHAN F, CHEN Y, LIAN L, HA P, HENDRICKS K, GHAFFARI S, ILIEV D, PENN B, WOODLAND AM, SMITH R, SALADA G, CARILLO A, LAITY K, GUPTE J, SWEDLUND B, TAVTIGIAN SV, TENG DH, LEES E (2000) Cancer Res 60:6171-7
118. WORKMAN JL, KINGSTON RE (1998) Annu Rev Biochem 67:545-79
119. WU DY, KRUMM A, SCHUBACH WH (2000) J Virol 74:8893-903
120. XUE Y, CANMAN JC, LEE CS, NIE Z, YANG D, MORENO GT, YOUNG MK, SALMON ED, WANG W (2000) Proc Natl Acad Sci U S A 97:13015-20
121. XUE Y, WONG J, MORENO GT, YOUNG MK, COTE J, WANG W (1998) Mol Cell 2:851-61
122. YOSHINAGA SK, PETERSON CL, HERSKOWITZ I, YAMAMOTO KR (1992) Science 258: 1598-604
123. YUKAWA M, KATOH S, MIYAKAWA T, TSUCHIYA E (1999) Genes Cells 4:99-110
124. YUNG E, SORIN M, PAL A, CRAIG E, MOROZOV A, DELATTRE O, KAPPES J, OTT D, KALPANA GV (2001) Nat Med 7:920-6
125. ZHANG HS, GAVIN M, DAHIYA A, POSTIGO AA, MA D, LUO RX, HARBOUR JW, DEAN DC (2000) Cell 101:79-89
126. ZHANG Y, LEROY G, SEELIG HP, LANE WS, REINBERG D (1998) Cell 95:279-89
127. ZHAO K, WANG W, RANDO OJ, XUE Y, SWIDEREK K, KUO A, CRABTREE GR (1998) Cell 95:625-36