-
1
-
-
0023907940
-
Charybdotoxin block of single Ca2+-activated K+ channels: Effects of channel gating, voltage, and ionic strength
-
Anderson, C. S., R. MacKinnon, C. Smith, and C. Miller. 1988. Charybdotoxin block of single Ca2+-activated K+ channels: Effects of channel gating, voltage, and ionic strength. J. Gen. Physiol. 91:317-333.
-
(1988)
J. Gen. Physiol.
, vol.91
, pp. 317-333
-
-
Anderson, C.S.1
MacKinnon, R.2
Smith, C.3
Miller, C.4
-
2
-
-
0035498860
-
Energetics of ion conduction through the K+ channel
-
Bernèche, S., and B. Roux. 2001. Energetics of ion conduction through the K+ channel. Nature. 414:73-77.
-
(2001)
Nature
, vol.414
, pp. 73-77
-
-
Bernèche, S.1
Roux, B.2
-
3
-
-
0034083955
-
Tethered blockers as molecular 'tape measures' for a voltage-gated K+ channel
-
Blaustein, R. O., P. A. Cole, C. Williams, and C. Miller. 2000. Tethered blockers as molecular 'tape measures' for a voltage-gated K+ channel. Nat. Struct. Biol. 7:309-311.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 309-311
-
-
Blaustein, R.O.1
Cole, P.A.2
Williams, C.3
Miller, C.4
-
4
-
-
0026726528
-
Analysis of side-chain organization on a refined model of charybdotoxin: Structural and functional implications
-
Bontems, F., B. Gilquin, C. Roumestand, A. Menez, and F. Toma. 1992. Analysis of side-chain organization on a refined model of charybdotoxin: Structural and functional implications. Biochemistry. 31:7756-7764.
-
(1992)
Biochemistry
, vol.31
, pp. 7756-7764
-
-
Bontems, F.1
Gilquin, B.2
Roumestand, C.3
Menez, A.4
Toma, F.5
-
5
-
-
0026418431
-
Refined structure of charybdotoxin: Common motifs in scorpion toxins and insect defensins
-
Bontems, F., C. Roumestand, B. Gilquin, A. Menez, and F. Toma. 1991. Refined structure of charybdotoxin: Common motifs in scorpion toxins and insect defensins. Science. 254:1521-1523.
-
(1991)
Science
, vol.254
, pp. 1521-1523
-
-
Bontems, F.1
Roumestand, C.2
Gilquin, B.3
Menez, A.4
Toma, F.5
-
6
-
-
84986512474
-
CHARMM: A program for macromolecular energy minimization and dynamics calculations
-
Brooks, B. R., R. E. Bruccoleri, B. D. Olafson, D. J. States, S. Swaminathan, and M. Karplus. 1983. CHARMM: A program for macromolecular energy minimization and dynamics calculations. J. Comput. Chem. 4:187-217.
-
(1983)
J. Comput. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
7
-
-
0028074974
-
Protein-protein recognition: Crystal structural analysis of a barnase-barstar complex at 2.0-A resolution
-
Buckle, A. M., G. Schreiber, and A. R. Fersht. 1994. Protein-protein recognition: Crystal structural analysis of a barnase-barstar complex at 2.0-A resolution. Biochemistry. 33:8878-8889.
-
(1994)
Biochemistry
, vol.33
, pp. 8878-8889
-
-
Buckle, A.M.1
Schreiber, G.2
Fersht, A.R.3
-
8
-
-
0035845563
-
Protein docking along smooth association pathways
-
Camacho, C. J., and S. Vajda. 2001. Protein docking along smooth association pathways. Proc. Natl. Acad. Sci. U.S.A. 98:10636-10641.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 10636-10641
-
-
Camacho, C.J.1
Vajda, S.2
-
9
-
-
0031697562
-
Structural implications of fluorescence quenching in the Shaker K+ channel
-
Cha, A., and F. Bezanilla. 1998. Structural implications of fluorescence quenching in the Shaker K+ channel. J. Gen. Physiol. 112:391-408.
-
(1998)
J. Gen. Physiol.
, vol.112
, pp. 391-408
-
-
Cha, A.1
Bezanilla, F.2
-
10
-
-
0030745896
-
Structural dynamics of the Streptomyces lividans K+ channel (SKC1): Oligonmeric stochiometry and stability
-
Cortes, D. M., and E. Perozo. 1997. Structural dynamics of the Streptomyces lividans K+ channel (SKC1): Oligonmeric stochiometry and stability. Biochemistry. 36:10343-10352.
-
(1997)
Biochemistry
, vol.36
, pp. 10343-10352
-
-
Cortes, D.M.1
Perozo, E.2
-
11
-
-
0035066437
-
Brownian dynamics simulations of interaction between scorpion toxin Lq2 and potassium ion channel
-
Cui, M., J. Shen, J. M. Briggs, X. Luo, X. Tan, H. Jiang, K. Chen, and R. Ji. 2001. Brownian dynamics simulations of interaction between scorpion toxin Lq2 and potassium ion channel. Biophys. J. 80:1659-1669.
-
(2001)
Biophys. J.
, vol.80
, pp. 1659-1669
-
-
Cui, M.1
Shen, J.2
Briggs, J.M.3
Luo, X.4
Tan, X.5
Jiang, H.6
Chen, K.7
Ji, R.8
-
12
-
-
0036302289
-
Brownian dynamics simulations of the recognition of the scorpion toxin P05 with the small-conductance calcium-activated potassium channels
-
Cui, M., J. Shen, J. M. Briggs, W. Fu, J. Wu, Y. Zhang, X. Luo, Z. Chi, R. Ji, H. Jiang, and K. Chen. 2002. Brownian dynamics simulations of the recognition of the scorpion toxin P05 with the small-conductance calcium-activated potassium channels. J. Mol. Biol. 318:417-428.
-
(2002)
J. Mol. Biol.
, vol.318
, pp. 417-428
-
-
Cui, M.1
Shen, J.2
Briggs, J.M.3
Fu, W.4
Wu, J.5
Zhang, Y.6
Luo, X.7
Chi, Z.8
Ji, R.9
Jiang, H.10
Chen, K.11
-
13
-
-
0032474463
-
A mutational analysis of binding interactions in an antigen-antibody protein-protein complex
-
Dall'Acqua, W., E. R. Goldman, W. Lin, C. Teng, D. Tsuchiya, H. Li, X. Ysern, B. C. Braden, Y. Li, S. J. Smith-Gill, and R. A. Mariuzza. 1998. A mutational analysis of binding interactions in an antigen-antibody protein-protein complex. Biochemistry. 37:7981-7991.
-
(1998)
Biochemistry
, vol.37
, pp. 7981-7991
-
-
Dall'Acqua, W.1
Goldman, E.R.2
Lin, W.3
Teng, C.4
Tsuchiya, D.5
Li, H.6
Ysern, X.7
Braden, B.C.8
Li, Y.9
Smith-Gill, S.J.10
Mariuzza, R.A.11
-
14
-
-
6544276937
-
On the convergent evolution of animal toxins: Conservation of a diad of functional residues in potassium channel-blocking toxins with unrelated structures
-
Dauplais, M., A. Lecoq, J. Song, J. Cotton, N. Jamin, B. Gilquin, C. Roumestand, C. Vita, C. L. de Medeiros, E. G. Rowan, A. L. Harvey, and A. Menez. 1997. On the convergent evolution of animal toxins: Conservation of a diad of functional residues in potassium channel-blocking toxins with unrelated structures. J. Biol. Chem. 272:4302-4309.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 4302-4309
-
-
Dauplais, M.1
Lecoq, A.2
Song, J.3
Cotton, J.4
Jamin, N.5
Gilquin, B.6
Roumestand, C.7
Vita, C.8
De Medeiros, C.L.9
Rowan, E.G.10
Harvey, A.L.11
Menez, A.12
-
15
-
-
0028871798
-
Side-chain conformational entropy in protein folding
-
Doig, A. J., and M. J. E. Sternberg. 1995. Side-chain conformational entropy in protein folding. Prot. Sci. 4:2247-2251.
-
(1995)
Prot. Sci.
, vol.4
, pp. 2247-2251
-
-
Doig, A.J.1
Sternberg, M.J.E.2
-
16
-
-
0030006564
-
Molecular properties of voltage-gated K+ channels
-
Dolly, J. O., and D. N. Parcej. 1996. Molecular properties of voltage-gated K+ channels. J. Bioenerg. Biomembr. 28:231-253.
-
(1996)
J. Bioenerg. Biomembr.
, vol.28
, pp. 231-253
-
-
Dolly, J.O.1
Parcej, D.N.2
-
17
-
-
0032478818
-
The structure of the potassium channel: Molecular basis of K+ conduction and selectivity
-
Doyle, D. A., J. M. Cabral, R. A. Pfuetzner, A. Kuo, J. M. Gulbis, S. L. Cohen, B. T. Chait, and R. MacKinnon. 1998. The structure of the potassium channel: Molecular basis of K+ conduction and selectivity. Science. 280:69-77.
-
(1998)
Science
, vol.280
, pp. 69-77
-
-
Doyle, D.A.1
Cabral, J.M.2
Pfuetzner, R.A.3
Kuo, A.4
Gulbis, J.M.5
Cohen, S.L.6
Chait, B.T.7
MacKinnon, R.8
-
18
-
-
0011143749
-
Comparative protein structure modeling
-
A. D. MacKerrel, B. Roux, and M. Watanabe, editors. Marcel Dekker Inc., New York
-
Fiser, A., R. Sanchez, F. Melo, and A. Sali. 2000. Comparative protein structure modeling. In A Molecular Perspective from Computation and Experiment. A. D. MacKerrel, B. Roux, and M. Watanabe, editors. Marcel Dekker Inc., New York.
-
(2000)
A Molecular Perspective from Computation and Experiment
-
-
Fiser, A.1
Sanchez, R.2
Melo, F.3
Sali, A.4
-
19
-
-
0035342450
-
Residue frequencies and pairing preferences at protein-protein interfaces
-
Glaser, F., D. M. Steinberg, I. A. Vakser, and N. Ben-Tal. 2001. Residue frequencies and pairing preferences at protein-protein interfaces. Prot. Struct. Funct. Genet. 43:89-102.
-
(2001)
Prot. Struct. Funct. Genet.
, vol.43
, pp. 89-102
-
-
Glaser, F.1
Steinberg, D.M.2
Vakser, I.A.3
Ben-Tal, N.4
-
20
-
-
0027443836
-
Mechanism of Charybdotoxin block of a voltage-gated K+ channel
-
Goldstein, S. A. N., and C. Miller. 1993. Mechanism of Charybdotoxin block of a voltage-gated K+ channel. Biophys. J. 65:1613-1619.
-
(1993)
Biophys. J.
, vol.65
, pp. 1613-1619
-
-
Goldstein, S.A.N.1
Miller, C.2
-
21
-
-
0028276482
-
The charybdotoxin receptor of Shaker K+ channel: Peptide and channel residues mediating molecular recognition
-
Goldstein, S. A. N., D. J. Pheasant, and C. Miller. 1994. The charybdotoxin receptor of Shaker K+ channel: Peptide and channel residues mediating molecular recognition. Neuron. 12:1377-1388.
-
(1994)
Neuron
, vol.12
, pp. 1377-1388
-
-
Goldstein, S.A.N.1
Pheasant, D.J.2
Miller, C.3
-
22
-
-
0030051784
-
Agitoxin footprinting the shaker potassium channel pore
-
Gross, A., and R. MacKinnon. 1996. Agitoxin footprinting the shaker potassium channel pore. Neuron. 16:399-406.
-
(1996)
Neuron
, vol.16
, pp. 399-406
-
-
Gross, A.1
MacKinnon, R.2
-
23
-
-
0027132431
-
Recognition between a bacterial ribonuclease, barnase and its natural inhibitor barstar
-
Guillet, V., Lapthorn, A., Hartley, R. W., and Y., M. 1993. Recognition between a bacterial ribonuclease, barnase and its natural inhibitor barstar. Structure. 1:165-177.
-
(1993)
Structure
, vol.1
, pp. 165-177
-
-
Guillet, V.1
Lapthorn, A.2
Hartley, R.W.3
-
24
-
-
0031012738
-
Recent studies on dendrotoxins and potassium channels
-
Harvey, A. L. 1997. Recent studies on dendrotoxins and potassium channels. Gen. Pharmacol. 28:7-12.
-
(1997)
Gen. Pharmacol.
, vol.28
, pp. 7-12
-
-
Harvey, A.L.1
-
25
-
-
0026446347
-
A functional connection between the pores of distantly related ion channels as revealed by mutant K+ channels
-
Heginbotham, L., T. Abrahamson, and R. MacKinnon. 1992. A functional connection between the pores of distantly related ion channels as revealed by mutant K+ channels. Science. 258:1152.
-
(1992)
Science
, vol.258
, pp. 1152
-
-
Heginbotham, L.1
Abrahamson, T.2
MacKinnon, R.3
-
26
-
-
0028267224
-
Mutations in the K+ channels signature sequence
-
Heginbotham, L., T. Abrahamson, and R. MacKinnon. 1994. Mutations in the K+ channels signature sequence. Biophys. J. 66:1061-1067.
-
(1994)
Biophys. J.
, vol.66
, pp. 1061-1067
-
-
Heginbotham, L.1
Abrahamson, T.2
MacKinnon, R.3
-
27
-
-
0032875483
-
Single streptomyces lividans K+ channels: Functional asymmetries and sidedness of proton activation
-
Heginbotham, L., M. LeMasurier, L. Kolmakova-Partensky, and C. Miller. 1999. Single streptomyces lividans K+ channels: Functional asymmetries and sidedness of proton activation. J. Gen. Phys. 114:551-560.
-
(1999)
J. Gen. Phys.
, vol.114
, pp. 551-560
-
-
Heginbotham, L.1
LeMasurier, M.2
Kolmakova-Partensky, L.3
Miller, C.4
-
28
-
-
0028987938
-
Revealing the architecture of a K+ channel pore through mutant cycles with a peptide inhibitor
-
Hidalgo, P., and R. MacKinnon. 1995. Revealing the architecture of a K+ channel pore through mutant cycles with a peptide inhibitor. Science. 268:307-310.
-
(1995)
Science
, vol.268
, pp. 307-310
-
-
Hidalgo, P.1
MacKinnon, R.2
-
29
-
-
0032168179
-
The activation gate of a voltage-gated K+ channel can be trapped in the open state by an intersubunit metal bridge
-
Holmgren, M., K. S. Shin, and G. Yellen. 1998. The activation gate of a voltage-gated K+ channel can be trapped in the open state by an intersubunit metal bridge. Neuron. 21:617-621.
-
(1998)
Neuron
, vol.21
, pp. 617-621
-
-
Holmgren, M.1
Shin, K.S.2
Yellen, G.3
-
30
-
-
0002271340
-
The lipid-protein interface of a Shaker K(+) channel
-
Hong, K. H., and C. Miller. 2000. The lipid-protein interface of a Shaker K(+) channel. J. Gen. Physiol. 115:51-58.
-
(2000)
J. Gen. Physiol.
, vol.115
, pp. 51-58
-
-
Hong, K.H.1
Miller, C.2
-
31
-
-
0025663105
-
Strength and cooperativity of contributions of surface salt bridges to protein stability
-
Horovitz, A., L. Serraro, B. Avron, M. Bycroft, and A. R. Fersht. 1990. Strength and cooperativity of contributions of surface salt bridges to protein stability. J. Mol. Biol. 216:1031-1044.
-
(1990)
J. Mol. Biol.
, vol.216
, pp. 1031-1044
-
-
Horovitz, A.1
Serraro, L.2
Avron, B.3
Bycroft, M.4
Fersht, A.R.5
-
32
-
-
0025996129
-
Identification of amino acid residues involved in dendrotoxin block of rat voltage-dependent potassium channels
-
Hurst, R. S., A. E. Busch, M. P. Kavanaugh, P. B. Osborne, R. A. North, and J. P. Adelman. 1991. Identification of amino acid residues involved in dendrotoxin block of rat voltage-dependent potassium channels. Mol. Pharmacol. 40:572-576.
-
(1991)
Mol. Pharmacol.
, vol.40
, pp. 572-576
-
-
Hurst, R.S.1
Busch, A.E.2
Kavanaugh, M.P.3
Osborne, P.B.4
North, R.A.5
Adelman, J.P.6
-
33
-
-
0032552974
-
A snake toxin inhibitor of inward rectifier potassium channel ROMK1
-
Imredy, J. P., C. Chen, and R. MacKinnon. 1998. A snake toxin inhibitor of inward rectifier potassium channel ROMK1. Biochemistry. 37:14867-14874.
-
(1998)
Biochemistry
, vol.37
, pp. 14867-14874
-
-
Imredy, J.P.1
Chen, C.2
MacKinnon, R.3
-
34
-
-
0032096837
-
Continuum solvation model: Electrostatic forces from numerical solutions to the Poisson-Boltzmann equation
-
Im, W., D. Beglov, and B. Roux. 1998. Continuum solvation model: Electrostatic forces from numerical solutions to the Poisson-Boltzmann equation. Comp. Phys. Comm. 111:59-75.
-
(1998)
Comp. Phys. Comm.
, vol.111
, pp. 59-75
-
-
Im, W.1
Beglov, D.2
Roux, B.3
-
35
-
-
0001847927
-
Cloned potassium channels from eukaryotes and prokaryotes
-
Jan, L. Y., and Y. N. Jan. 1997. Cloned potassium channels from eukaryotes and prokaryotes. Annu. Rev. Neurosci. 20:91-123.
-
(1997)
Annu. Rev. Neurosci.
, vol.20
, pp. 91-123
-
-
Jan, L.Y.1
Jan, Y.N.2
-
36
-
-
0037198626
-
Crystal structure and mechanism of a calcium-gated potassium channel
-
Jiang, Y., A. Lee, J. Chen, M. Cadene, B. T. Chait, and R. MacKinnon. 2002. Crystal structure and mechanism of a calcium-gated potassium channel. Nature. 417:515-522.
-
(2002)
Nature
, vol.417
, pp. 515-522
-
-
Jiang, Y.1
Lee, A.2
Chen, J.3
Cadene, M.4
Chait, B.T.5
MacKinnon, R.6
-
37
-
-
0033607296
-
Mechanisms of inward-rectifier K+ channel inhibition by tertiapin-Q
-
Jin, W., A. M. Klem, J. H. Lewis, and Z. Lu. 1999. Mechanisms of inward-rectifier K+ channel inhibition by tertiapin-Q. Biochemistry. 38:14294-14301.
-
(1999)
Biochemistry
, vol.38
, pp. 14294-14301
-
-
Jin, W.1
Klem, A.M.2
Lewis, J.H.3
Lu, Z.4
-
39
-
-
0032483810
-
ShK-Dap22, a potent Kv1.3-specific immunosuppressive polypeptide
-
Kalman, K., M. W. Pennington, M. D. Lanigan, A. Nguyen, H. Rauer, V. Mahnir, K. Paschetto, W. R. Kem, S. Grissmer, G. A. Gutman, E. P. Christian, M. D. Cahalan, R. S. Norton, and K. G. Chandy. 1998. ShK-Dap22, a potent Kv1.3-specific immunosuppressive polypeptide. J. Biol. Chem. 273:32697-32707.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 32697-32707
-
-
Kalman, K.1
Pennington, M.W.2
Lanigan, M.D.3
Nguyen, A.4
Rauer, H.5
Mahnir, V.6
Paschetto, K.7
Kem, W.R.8
Grissmer, S.9
Gutman, G.A.10
Christian, E.P.11
Cahalan, M.D.12
Norton, R.S.13
Chandy, K.G.14
-
40
-
-
0029831680
-
An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally related subfamilies
-
Kelley, L. A., S. P. Gardner, and M. J. Sutcliffe. 1996. An automated approach for clustering an ensemble of NMR-derived protein structures into conformationally related subfamilies. Prot. Eng. 9:1063-1065.
-
(1996)
Prot. Eng.
, vol.9
, pp. 1063-1065
-
-
Kelley, L.A.1
Gardner, S.P.2
Sutcliffe, M.J.3
-
41
-
-
0029113242
-
Solution structure of the potassium channel inhibitor agitoxin 2: Caliper for probing channel geometry
-
Krezel, A. M., C. Kasibhatla, P. Hidalgo, R. MacKinnon, and G. Wagner. 1995. Solution structure of the potassium channel inhibitor agitoxin 2: Caliper for probing channel geometry. Prot. Sci. 4:1478-1489.
-
(1995)
Prot. Sci.
, vol.4
, pp. 1478-1489
-
-
Krezel, A.M.1
Kasibhatla, C.2
Hidalgo, P.3
MacKinnon, R.4
Wagner, G.5
-
42
-
-
0025944232
-
Voltage-sensing residues in the S4 region of a mammalian K+ channel
-
Liman, E. R., P. Hess, F. Weaver, and G. Koren. 1991. Voltage-sensing residues in the S4 region of a mammalian K+ channel. Nature. 353:752-756.
-
(1991)
Nature
, vol.353
, pp. 752-756
-
-
Liman, E.R.1
Hess, P.2
Weaver, F.3
Koren, G.4
-
43
-
-
0026509068
-
Incremental reductions of positive charge within the S4 region of a voltage-gated K+ channel result in corresponding decreases in gating charge
-
Logothetis, D. E., S. Movahedi, C. Satler, K. Lindpaintner, and B. Nadal-Ginard. 1992. Incremental reductions of positive charge within the S4 region of a voltage-gated K+ channel result in corresponding decreases in gating charge. Neuron. 8:531-540.
-
(1992)
Neuron
, vol.8
, pp. 531-540
-
-
Logothetis, D.E.1
Movahedi, S.2
Satler, C.3
Lindpaintner, K.4
Nadal-Ginard, B.5
-
44
-
-
0035950089
-
Ion conduction pore is conserved among potassium channels
-
Lu, Z., A. M. Klem, and Y. Ramu. 2001. Ion conduction pore is conserved among potassium channels. Nature, 413:809-813.
-
(2001)
Nature
, vol.413
, pp. 809-813
-
-
Lu, Z.1
Klem, A.M.2
Ramu, Y.3
-
45
-
-
0025762715
-
Determination of the subunit stoichiometry of a voltage-activated potassium channel
-
MacKinnon, R. 1991. Determination of the subunit stoichiometry of a voltage-activated potassium channel. Nature. 350:232-235.
-
(1991)
Nature
, vol.350
, pp. 232-235
-
-
MacKinnon, R.1
-
46
-
-
0032478696
-
Structural conservation in prokaryotic and eukaryotic potassium channels
-
MacKinnon, R., S. L. Cohen, A. Kuo, A. Lee, and B. T. Chait. 1998. Structural conservation in prokaryotic and eukaryotic potassium channels. Science. 280:106-109.
-
(1998)
Science
, vol.280
, pp. 106-109
-
-
MacKinnon, R.1
Cohen, S.L.2
Kuo, A.3
Lee, A.4
Chait, B.T.5
-
47
-
-
0025644364
-
Mapping the receptor site for charybdotoxin, a pore-blocking peptide potassium channel inhibitor
-
MacKinnon, R., L. Heginbotham, and T. Abrahamson. 1990. Mapping the receptor site for charybdotoxin, a pore-blocking peptide potassium channel inhibitor. Neuron. 5:767-771.
-
(1990)
Neuron
, vol.5
, pp. 767-771
-
-
MacKinnon, R.1
Heginbotham, L.2
Abrahamson, T.3
-
48
-
-
0023887273
-
Mechanism of charybdotoxin block of the high-conductance Ca2+ activated K+ channel
-
MacKinnon, R., and C. Miller. 1988. Mechanism of charybdotoxin block of the high-conductance Ca2+ activated K+ channel. J. Gen. Phys. 91:335-349.
-
(1988)
J. Gen. Phys.
, vol.91
, pp. 335-349
-
-
MacKinnon, R.1
Miller, C.2
-
49
-
-
0024426645
-
Mutant potassium channels with altered binding of charybdotoxin, a pore-blocking peptide inhibitor
-
MacKinnon, R., and C. Miller. 1989. Mutant potassium channels with altered binding of charybdotoxin, a pore-blocking peptide inhibitor. Science. 245:1382-1385.
-
(1989)
Science
, vol.245
, pp. 1382-1385
-
-
MacKinnon, R.1
Miller, C.2
-
50
-
-
0028983387
-
The charybdotoxin family of K+ channel-blocking peptides
-
Miller, C. 1995. The charybdotoxin family of K+ channel-blocking peptides. Neuron. 15:5-10.
-
(1995)
Neuron
, vol.15
, pp. 5-10
-
-
Miller, C.1
-
51
-
-
0032894975
-
Helical structure and packing orientation of the S2 segment in the Shaker K+ channel
-
Monks, S. A., D. J. Needleman, and C. Miller. 1999. Helical structure and packing orientation of the S2 segment in the Shaker K+ channel. J. Gen. Physiol. 113:415-423.
-
(1999)
J. Gen. Physiol.
, vol.113
, pp. 415-423
-
-
Monks, S.A.1
Needleman, D.J.2
Miller, C.3
-
52
-
-
0030002462
-
A symmetry-driven search for electrostatic interaction partners in charybdotoxin and a voltage-gated K+ channel
-
Naini, A. A., and C. Miller. 1996. A symmetry-driven search for electrostatic interaction partners in charybdotoxin and a voltage-gated K+ channel. Biochemistry. 35:6181-6187.
-
(1996)
Biochemistry
, vol.35
, pp. 6181-6187
-
-
Naini, A.A.1
Miller, C.2
-
53
-
-
0030044863
-
A strongly interacting pair of residues on the contact surface of charybdotoxin and a Shaker K+ channel
-
Naranjo, D., and C. Miller. 1996. A strongly interacting pair of residues on the contact surface of charybdotoxin and a Shaker K+ channel. Neuron. 16:123-130.
-
(1996)
Neuron
, vol.16
, pp. 123-130
-
-
Naranjo, D.1
Miller, C.2
-
54
-
-
0031167555
-
Atomic radii for continuum electrostatics calculations based on molecular dynamics free energy simulations
-
Nina, M., D. Beglov, and B. Roux. 1997. Atomic radii for continuum electrostatics calculations based on molecular dynamics free energy simulations. J. Phys. Chem. B. 101:5239-5248.
-
(1997)
J. Phys. Chem. B
, vol.101
, pp. 5239-5248
-
-
Nina, M.1
Beglov, D.2
Roux, B.3
-
55
-
-
0034769223
-
Electrostatic contributions to protein-protein interactions: Fast energetic filters for docking and their physical basis
-
Norel, R., F. Sheinerman, D. Petrey, and B. Honig. 2001. Electrostatic contributions to protein-protein interactions: Fast energetic filters for docking and their physical basis. Prot. Sci. 10:2147-2161.
-
(2001)
Prot. Sci.
, vol.10
, pp. 2147-2161
-
-
Norel, R.1
Sheinerman, F.2
Petrey, D.3
Honig, B.4
-
56
-
-
0031547977
-
Empirical free energy calculations: A blind test and further improvements to the method
-
Novotny, J., R. E. Bruccoleri, M. Davis, and K. Sharp. 1997. Empirical free energy calculations: A blind test and further improvements to the method. J. Mol. Biol. 286:401-411.
-
(1997)
J. Mol. Biol.
, vol.286
, pp. 401-411
-
-
Novotny, J.1
Bruccoleri, R.E.2
Davis, M.3
Sharp, K.4
-
57
-
-
0032538940
-
Mean-field analysis of protein-protein interactions
-
Olson, M. A. 1998. Mean-field analysis of protein-protein interactions. Biophys. Chem. 75:115-128.
-
(1998)
Biophys. Chem.
, vol.75
, pp. 115-128
-
-
Olson, M.A.1
-
58
-
-
0033970625
-
Modeling implicit reorganization in contiuum descriptions of protein-protein interactions
-
Olson, M. A., and L. T. Reinke. 2000. Modeling implicit reorganization in contiuum descriptions of protein-protein interactions. Prot. Struct. Funct. Genet. 38:115-119.
-
(2000)
Prot. Struct. Funct. Genet.
, vol.38
, pp. 115-119
-
-
Olson, M.A.1
Reinke, L.T.2
-
59
-
-
0034212826
-
BIGGER: A new (soft) docking algorithm for predicting protein interactions
-
Palma, P. N., L. Krippahl, J. E. Wampler, and J. J. Moura. 2000. BIGGER: A new (soft) docking algorithm for predicting protein interactions. Proteins. 39:372-384.
-
(2000)
Proteins
, vol.39
, pp. 372-384
-
-
Palma, P.N.1
Krippahl, L.2
Wampler, J.E.3
Moura, J.J.4
-
60
-
-
0026803224
-
Interaction of charybdotoxin with permeant ions inside the pore of a K+ channel
-
Park, C. S., and C. Miller. 1992. Interaction of charybdotoxin with permeant ions inside the pore of a K+ channel. Neuron. 9:307-313.
-
(1992)
Neuron
, vol.9
, pp. 307-313
-
-
Park, C.S.1
Miller, C.2
-
61
-
-
0025541118
-
Structural basis of potassium channel diversity in the nervous system
-
Pongs, O. 1990. Structural basis of potassium channel diversity in the nervous system. J. Basic Clin. Physiol. Pharmacol. 1:31-39.
-
(1990)
J. Basic Clin. Physiol. Pharmacol.
, vol.1
, pp. 31-39
-
-
Pongs, O.1
-
62
-
-
0027503123
-
Receptor sites for open channel blockers of Shaker voltage-gated potassium channels-molecular approaches
-
Pongs, O. 1993. Receptor sites for open channel blockers of Shaker voltage-gated potassium channels-molecular approaches. J. Recept. Res. 13:503-512.
-
(1993)
J. Recept. Res.
, vol.13
, pp. 503-512
-
-
Pongs, O.1
-
63
-
-
0030064382
-
Spatial localization of the K+ channel selectivity filter by mutant cycle-based structure analysis
-
Ranganathan, R., J. H. Lewis, and R. MacKinnon. 1996. Spatial localization of the K+ channel selectivity filter by mutant cycle-based structure analysis. Neuron. 16:131-139.
-
(1996)
Neuron
, vol.16
, pp. 131-139
-
-
Ranganathan, R.1
Lewis, J.H.2
MacKinnon, R.3
-
64
-
-
0033966212
-
Structure-guided transformation of charybdotoxin yields an analog that selectively targets Ca(2+)-activated over voltage-gated K(+) channels
-
Rauer, H., M. D. Lanigan, M. W. Pennington, J. Aiyar, S. Ghanshani, M. D. Cahalan, R. S. Norton, and K. G. Chandy. 2000. Structure-guided transformation of charybdotoxin yields an analog that selectively targets Ca(2+)-activated over voltage-gated K(+) channels. J. Biol. Chem. 275:1201-1208.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 1201-1208
-
-
Rauer, H.1
Lanigan, M.D.2
Pennington, M.W.3
Aiyar, J.4
Ghanshani, S.5
Cahalan, M.D.6
Norton, R.S.7
Chandy, K.G.8
-
65
-
-
0034193510
-
Protein docking using spherical polar Fourier correlations
-
Ritchie, D. W., and G. J. Kemp. 2000. Protein docking using spherical polar Fourier correlations. Proteins. 39:178-194.
-
(2000)
Proteins
, vol.39
, pp. 178-194
-
-
Ritchie, D.W.1
Kemp, G.J.2
-
66
-
-
33646940952
-
Numerical integration of the Cartesian equations of motions of a system with constraints: Molecular dynamics of n-alkanes
-
Ryckaert, J. P., G. Ciccotti, and H. J. C. Berendsen. 1977. Numerical integration of the Cartesian equations of motions of a system with constraints: Molecular dynamics of n-alkanes. J. Comp. Chem. 23:327-341.
-
(1977)
J. Comp. Chem.
, vol.23
, pp. 327-341
-
-
Ryckaert, J.P.1
Ciccotti, G.2
Berendsen, H.J.C.3
-
67
-
-
0027136282
-
Comparative protein modelling by satisfaction of spatial restraints
-
Sali, A., and T. L. Blundell. 1993. Comparative protein modelling by satisfaction of spatial restraints. J. Mol. Biol. 234:779-815.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 779-815
-
-
Sali, A.1
Blundell, T.L.2
-
68
-
-
0028871814
-
Evaluation of comparative protein protein modeling by MODELLER
-
Sali, A., L. Potterton, F. Yuan, H. van Vlijmen, and M. Karplus. 1995. Evaluation of comparative protein protein modeling by MODELLER. Proteins. 23:318-326.
-
(1995)
Proteins
, vol.23
, pp. 318-326
-
-
Sali, A.1
Potterton, L.2
Yuan, F.3
Van Vlijmen, H.4
Karplus, M.5
-
69
-
-
0029056922
-
Energetics of protein-protein interactions: Analysis of the barnase-barstar interface by single mutations and double mutant cycles
-
Schreiber, G., and A. R. Fersht. 1995. Energetics of protein-protein interactions: Analysis of the barnase-barstar interface by single mutations and double mutant cycles. J. Mol. Biol. 248:478-486.
-
(1995)
J. Mol. Biol.
, vol.248
, pp. 478-486
-
-
Schreiber, G.1
Fersht, A.R.2
-
70
-
-
0028841033
-
A procaryotic potassium ion channel with two predicted transmembrane seqments from streptomyces lividans
-
Schrempf, H., H. O. Schmidt, R. Kummerlen, S. Hinnah, D. Muller, M. Betzler, T. Steinkamp, and R. Wagner. 1995. A procaryotic potassium ion channel with two predicted transmembrane seqments from streptomyces lividans. EMBO J. 14:5170.
-
(1995)
EMBO J.
, vol.14
, pp. 5170
-
-
Schrempf, H.1
Schmidt, H.O.2
Kummerlen, R.3
Hinnah, S.4
Muller, D.5
Betzler, M.6
Steinkamp, T.7
Wagner, R.8
-
71
-
-
0025093185
-
Estimating the contribution of engineered surface electrostatic interactions to protein stability using double mutants cycles
-
Serraro, L., A. Horovitz, B. Avron, M. Bycroft, and A. R. Fersht. 1990. Estimating the contribution of engineered surface electrostatic interactions to protein stability using double mutants cycles. Biochemistry. 29:9343-9352.
-
(1990)
Biochemistry
, vol.29
, pp. 9343-9352
-
-
Serraro, L.1
Horovitz, A.2
Avron, B.3
Bycroft, M.4
Fersht, A.R.5
-
72
-
-
0032189032
-
Calculation of HyHe110-lysozyme binding free energy changes: Effect of ten point mutations
-
Sharp, K. 1998. Calculation of HyHe110-lysozyme binding free energy changes: Effect of ten point mutations. Prot. Struct. Funct. Genet. 33:39-48.
-
(1998)
Prot. Struct. Funct. Genet.
, vol.33
, pp. 39-48
-
-
Sharp, K.1
-
73
-
-
0035078574
-
Three-dimensional structure of a voltage-gated potassium channel at 2.5 nm resolution
-
Sokolova, O., L. Kolmakova-Partensky, and N. Grigorieff. 2001. Three-dimensional structure of a voltage-gated potassium channel at 2.5 nm resolution. Structure. 9:215-220.
-
(2001)
Structure
, vol.9
, pp. 215-220
-
-
Sokolova, O.1
Kolmakova-Partensky, L.2
Grigorieff, N.3
-
74
-
-
0028031088
-
Electrostatic distance geometry in a K+ channel vestibule
-
Stocker, M., and C. Miller. 1994. Electrostatic distance geometry in a K+ channel vestibule. Proc. Natl. Acad. Sci. U.S.A. 91:9509-9513.
-
(1994)
Proc. Natl. Acad. Sci. U.S.A.
, vol.91
, pp. 9509-9513
-
-
Stocker, M.1
Miller, C.2
-
75
-
-
0025901012
-
Swapping of functional domains in voltage-gated K+ channels
-
Stocker, M., O. Pongs, M. Hoth, S. H. Heinemann, W. Stuhmer, K. H. Schroter, and J. P. Ruppersberg. 1991. Swapping of functional domains in voltage-gated K+ channels. Proc. Royal Soc. London Ser. B Biol. Sci. 245:101-107.
-
(1991)
Proc. Royal Soc. London Ser. B Biol. Sci.
, vol.245
, pp. 101-107
-
-
Stocker, M.1
Pongs, O.2
Hoth, M.3
Heinemann, S.H.4
Stuhmer, W.5
Schroter, K.H.6
Ruppersberg, J.P.7
-
76
-
-
0023270432
-
Sequence of a probable potassium channel component encoded at Shaker locus of Drosophila
-
Tempel, B. L., D. M. Papazian, T. L. Schwarz, Y. N. Jan, and L. Y. Jan. 1987. Sequence of a probable potassium channel component encoded at Shaker locus of Drosophila. Science. 237:770-775.
-
(1987)
Science
, vol.237
, pp. 770-775
-
-
Tempel, B.L.1
Papazian, D.M.2
Schwarz, T.L.3
Jan, Y.N.4
Jan, L.Y.5
-
77
-
-
0033818976
-
Voltage-dependent structural interactions in the Shaker K(+) channel
-
Tiwari-Woodruff, S. K., M. A. Lin, C. T. Schulteis, and D. M. Papazian. 2000. Voltage-dependent structural interactions in the Shaker K(+) channel. J. Gen. Physiol. 115:123-138.
-
(2000)
J. Gen. Physiol.
, vol.115
, pp. 123-138
-
-
Tiwari-Woodruff, S.K.1
Lin, M.A.2
Schulteis, C.T.3
Papazian, D.M.4
-
78
-
-
0029878263
-
Solution structure of ShK toxin, a novel potassium channel inhibitor from a sea anemone
-
Tudor, J. E., P. K. Pallaghy, M. W. Pennington, and R. S. Norton. 1996. Solution structure of ShK toxin, a novel potassium channel inhibitor from a sea anemone. Nat. Struct. Biol. 3:317-320.
-
(1996)
Nat. Struct. Biol.
, vol.3
, pp. 317-320
-
-
Tudor, J.E.1
Pallaghy, P.K.2
Pennington, M.W.3
Norton, R.S.4
-
79
-
-
0028973231
-
The alpha-dendrotoxin footprint on a mammalian potassium channel
-
Tytgat, J., T. Debont, E. Carmeliet, and P. Daenens. 1995. The alpha-dendrotoxin footprint on a mammalian potassium channel. J. Biol. Chem. 270:24776-24781.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 24776-24781
-
-
Tytgat, J.1
Debont, T.2
Carmeliet, E.3
Daenens, P.4
-
80
-
-
0027141511
-
A structure refinement method based on molecular dynamics in four spatial dimensions
-
van Shaik, R. C., H. J. C. Berendsen, A. E. Torda, and W. F. van Gunsteren. 1993. A structure refinement method based on molecular dynamics in four spatial dimensions. J. Mol. Biol. 234:751-762.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 751-762
-
-
Van Shaik, R.C.1
Berendsen, H.J.C.2
Torda, A.E.3
Van Gunsteren, W.F.4
-
81
-
-
0035499892
-
Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution
-
Zhou, Y., J. H. Morais-Cabral, A. Kaufman, and R. MacKinnon. 2001. Chemistry of ion coordination and hydration revealed by a K+ channel-Fab complex at 2.0 A resolution. Nature. 414:43-48.
-
(2001)
Nature
, vol.414
, pp. 43-48
-
-
Zhou, Y.1
Morais-Cabral, J.H.2
Kaufman, A.3
MacKinnon, R.4
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