Mean-field analysis of protein-protein interactions

Biophysical Chemistry

Volumn 75, Issue 2, 1998, Pages 115-128

  Olson, Mark A ^a  

^a Dept of Cell Biol/Biochem U   (United States)

Author keywords

Binding free energy; Continuum model; Electrostatics; Hydrophobic effect; Molecular association; Protein protein interaction

Indexed keywords

ALANINE;

AMINO ACID SUBSTITUTION; ANTIGEN BINDING; ARTICLE; BINDING AFFINITY; CRYSTALLOGRAPHY; DIELECTRIC CONSTANT; ELECTRICITY; ENTROPY; HYDROPHOBICITY; MATHEMATICAL ANALYSIS; PRIORITY JOURNAL; PROTEIN PROTEIN INTERACTION; PROTEIN TERTIARY STRUCTURE;

EID: 0032538940     PISSN: 03014622     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0301-4622(98)00201-4     Document Type: Article

References (32)

1. Gilson M.K., Honig B. Proteins. 4:1988;7.
2. Sharp K.A., Honig B. Annu. Rev. Biophys. Biophys. Chem. 19:1990;151.
3. W.F. van Gunsteren, in: W.F. van Gunsteren, P.K. Weiner (Eds.), Computer Simulation of Biomolecular Systems, ESCOM, Leiden, 1989, p. 27.
4. Kollman P.A. Chem. Rev. 93:1993;2395.
5. Novonty J., Bruccoleri R.E., Davis M., Sharp K.A. J. Mol. Biol. 268:1997;401.
6. Jackson R.M., Sternberg M.J.E. J. Mol. Biol. 250:1995;258.
7. Froloff N., Windemuth A., Honig B. Protein Sci. 6:1997;1293.
8. Dall'Acqua W., Goldman E., Eisenstein E., Mariuzza R.A. Biochemistry. 35:1996;9667.
9. Nicholls A., Sharp K.A., Honig B. Proteins. 11:1991;281.
10. Doig A.J., Sternberg M.J.E. Protein Sci. 4:1995;2247.
11. Jackson R.M., Sternberg M.J.E. Protein Eng. 7:1994;371.
12. Sharp K.A., Nicholls A., Friedman R., Honig B. Biochemistry. 30:1991;9686.
13. Page M.I., Page W.P. Proc. Natl. Acad. Sci. 68:1971;1678.
14. Finkelstein A.V., Janin J. Protein Eng. 3:1989;1.
15. Erickson H.P. J. Mol. Biol. 206:1989;465.
16. Tidor B., Karplus M. J. Mol. Biol. 238:1994;405.
17. Maple J.R., Hwang M.-J., Stockfisch T.P., Dinur U., Waldman M., Ewig C.S., Hagler A.T. J. Comput. Chem. 15:1994;195.
18. Warwicker J., Watson H.C. J. Mol. Biol. 157:1982;671.
19. Klapper I., Hagstrom R., Fine R., Sharp K.A., Honig B. Proteins. 1:1986;47.
20. Gilson M.K., Sharp K.A., Honig B. J. Comput. Chem. 9:1988;327.
21. Stifoff D., Sharp K.A., Honig B. J. Phys. Chem. 98:1994;1978.
22. M.L. Connolly, Molecular Surface Program 429 (1981). The Quantum Chemistry Program Exchange, Indiana University, Bloomington, Indiana 47405, USA.
23. Pace C.N. CRC Crit. Rev. Biochem. 3:1975;1.
24. Privalov P.L. Adv. Protein Chem. 33:1979;167.
25. Hoops S.C., Anderson K.W., Merz K.M. Jr. J. Am. Chem. Soc. 113:1991;8262.
26. Olson M.A., Cuff L. J. Mol. Recogn. 10:1998;277.
27. Sham Y.Y., Chu Z.T., Warshel A. J. Phys. Chem. 101:1997;4458.
28. Muegge I., Tao H., Warshel A. Protein Eng. 10:1997;1363.
29. Honig B., Nicholls A. Science. 258:1995;1144.
30. Hendsch Z.S., Tidor B. Protein Sci. 3:1994;211.
31. W.H. Press, B.P. Flannery, S.A. Teukolsky, W.T. Vetterling, Numerical Recipes, Cambridge University Press, Cambridge, UK, 1986.
32. Zhang T., Koshland D.E. Jr. Protein Sci. 5:1997;348.