Heritable endogenous gene regulation in plants with designed polydactyl zinc finger transcription factors

Proceedings of the National Academy of Sciences of the United States of America

Volumn 99, Issue 20, 2002, Pages 13296-13301

  Guan, Xuen ^a   Stege, Justin ^b,c   Kim, Myoung ^a   Dahmani, Zina ^a   Fan, Nancy ^a,d   Heifetz, Peter ^a   Barbas III, Carlos F ^b   Briggs, Steven P ^a  

^a SYNGENTA BIOTECHNOLOGY INC   (United States)

^b SCRIPPS RESEARCH INSTITUTE   (United States)

^c DIVERSA CORPORATION   (United States)

^d BIOGEN   (United States)

Author keywords

APETALA1; APETALA3; Floral development

Indexed keywords

BETA GLUCURONIDASE; HYBRID PROTEIN; TETRAMER; TRANSCRIPTION FACTOR; ZINC FINGER PROTEIN;

AP3 GENE; ARABIDOPSIS; ARTICLE; CONTROLLED STUDY; ENZYME ACTIVITY; EXPRESSION VECTOR; GENE; GENE ACTIVATION; GENE CONTROL; GENE EXPRESSION REGULATION; GENE REPRESSION; GENE TARGETING; GENETIC CODE; GENETIC TRANSCRIPTION; GENETIC TRANSFORMATION; HERITABILITY; HERPES SIMPLEX VIRUS; HISTOCHEMISTRY; NONHUMAN; PETAL; PHENOTYPE; PLANT; PLANT LEAF; PLANT TISSUE; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DNA BINDING; PROTEIN DOMAIN; PROTEIN FUNCTION; PROTOPLAST; REGULATORY MECHANISM; REPORTER GENE; TRANSCRIPTION REGULATION; TRANSGENE; TRANSGENIC PLANT;

ALLELES; AMINO ACID SEQUENCE; ARABIDOPSIS PROTEINS; GENE EXPRESSION REGULATION, PLANT; GLUCURONIDASE; HOMEODOMAIN PROTEINS; HUMANS; MADS DOMAIN PROTEINS; MOLECULAR SEQUENCE DATA; PHENOTYPE; PLANT LEAVES; PLANT PROTEINS; PLANTS, GENETICALLY MODIFIED; PROMOTER REGIONS (GENETICS); PROTEIN STRUCTURE, TERTIARY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER; ZINC FINGERS;

ARABIDOPSIS; EMBRYOPHYTA; SIMPLEXVIRUS; VECTORS;

EID: 0036792099     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.192412899     Document Type: Article

References (50)

1. The Arabidopsis Genome Initiative (2000) Nature (London) 408, 796-815.
2. Goff, S., Ricke, D., Lan, T., Presting, G., Wang, R., Dunn, M., Glazebrook, J., Sessions, A., Oeller, P., Varma, H., et al. (2002) Science 296, 92-100.
3. Riechmann, J., Heard, J., Martin, G., Reuber, L., Jiang, C., Keddie, J., Adam, L., Pineda, O., Ratcliffe, O. J., Samaha, R. R., et al. (2000) Science 290, 2105-2110.
4. Berg, J. M. (1990) Annu. Rev. Biophys. Biophys. Chem. 19, 405-421.
5. Ashworth, A. & Denny, P. (1991) Mamm. Genome 1, 196-200.
6. Pieler, T. & Bellefroid, E. (1994) Mol. Biol. Rep. 20, 1-8.
7. Takatsuji, H. (1998) Cell. Mol. Life Sci. 54, 582-596.
8. Beerli, R. & Barbas, C. F., III (2002) Nat. Biotechnol. 20, 135-141.
9. Elrod-Erickson, M., Rould, M. A., Nekludova, L. & Pabo, C. O. (1996) Structure (London) 4, 1171-1180.
10. Desjarlais, J. R. & Berg, J. M. (1992) Proc. Natl. Acad. Sci. USA 89, 7345-7349.
11. Wu, H., Yang, W. & Barbas, C. F., III (1995) Proc. Natl. Acad. Sci. USA 92, 344-348.
12. Rebar, E. J. & Pabo, C. O. (1994) Science 263, 671-673.
13. Choo, Y. & Klug, A. (1994) Proc. Natl. Acad. Sci. USA 91, 11163-11167.
14. Wolfe, S. A., Grant, R. A., Elrod-Erickson, M. & Pabo, C. O. (2001) Structure (London) 9, 717-723.
15. Greisman, H. A. & Pabo, C. O. (1997) Science 275, 657-661.
16. Segal, D. J., Dreier, B., Beerli, R. R. & Barbas, C. F., III (1999) Proc. Natl. Acad. Sci. USA 96, 2758-2763.
17. Dreier, B., Segal, D. J. & Barbas, C. F., III (2000) J. Mol. Biol. 303, 489-502.
18. Liu, Q., Segal, D. J., Ghiara, J. B. & Barbas, C. F., III (1997) Proc. Natl. Acad. Sci. USA 94, 5525-5530.
19. Beerli, R. R., Segal, D. J., Dreier, B. & Barbas, C. F., III (1998) Proc. Natl. Acad. Sci. USA 95, 14628-14633.
20. Kang, J. S. & Kim, J. (2000) J. Biol. Chem. 275, 8742-8748.
21. Beerli, R. R., Dreier, B. & Barbas, C. F., III (2000) Proc. Natl. Acad. Sci. USA 97, 1495-1500.
22. Zhang, L., Spratt, S. K., Liu, Q., Johnstone, B., Qi, H., Raschke, E. E., Jamieson, A. C., Rebar, E. J., Wolffe, A. P. & Case, C. C. (2000) J. Biol. Chem. 275, 33850-33860.
23. Dreier, B., Beerli, R., Segal, D., Flippin, J. & Barbas, C. F., III (2001) J. Biol. Chem. 276, 29466-29478.
24. Liu, P., Rebar, E. J., Zhang, L., Liu, Q., Jamieson, A. C., Liang, Y., Qi, H., Li, P. X., Chen, B., Mendel, M. C., et al. (2001) J. Biol. Chem. 276, 11323-11334.
25. Weigel, D. (1995) Annu. Rev. Genet. 29, 19-39.
26. Theissen, G. & Saedler, H. (1995) Curr. Opin. Genet. Dev. 5, 628-639.
27. Bowman, J. L., Baum, S. F., Eshed, Y., Putterill, J. & Alvarez, J. (1999) Curr. Top. Dev. Biol. 45, 155-205.
28. Yanofsky, M. (1995) Annu. Rev. Plant Physiol. Plant Mol. Biol. 46, 167-188.
29. Irish, V. F. (1999) Dev. Biol. 209, 211-220.
30. Jenik, P. D. & Irish, V. F. (2001) Development (Cambridge, U.K.) 128, 13-23.
31. Jack, T., Brockman, L. L. & Meyerowitz, E. M. (1992) Cell 68, 683-687.
32. Jack, T., Fox, G. L. & Meyerowitz, E. M. (1994) Cell 76, 703-716.
33. Irish, V. F. & Yamamoto, Y. T. (1995) Plant Cell 7, 1635-1644.
34. Barbas, C. F., III, Stege, J., Guan, X. & Dalmia, B. (2001) PCT WO 01/52620.
35. Norris, S. R., Meyer, S. E. & Callis, J. (1993) Plant Mol. Biol. 21, 895-906.
36. Callis, J., Raasch, J. A. & Vierstra, R. D. (1990) J. Biol. Chem. 265, 12486-12493.
37. Bechtold, N. & Pelletier, G. (1998) in Arabidopsis Protocols, eds. Martinez-Zapater, J. & Salinas, J. (Humana, Clifton, NJ), pp. 259-266.
38. Bowman, J., ed. (1993) in Arabidopsis, An Atlas of Morphology and Development (Springer, New York), pp. 135-145.
39. Jefferson, R. A., Kavanagh, T. A. & Bevan, M. W. (1987) EMBO J. 6, 3901-3907.
40. Sessions, A., Weigel, D. & Yanofsky, M. (1999) Plant J. 20, 259-263.
41. Ruzin, S. E., eds. (1999) in Plant Microtechnique and Microscopy (Oxford Univ. Press, New York), pp. 57-86.
42. Mandel, A. M., Gustafson-Brown, C., Savidge, B. & Yanofsky, M. F. (1992) Nature (London) 360, 273-277.
43. Gustafson-Brown, C., Savidge, B. & Yanofsky, M. F. (1994) Cell 76, 131-143.
44. Byzova, M. V., Franken, J., Aarts, M. G., de Almeida-Engler, J., Engler, G., Mariani, C., Van Lookeren Campagne, M. M. & Angenent, G. C. (1999) Genes Dev. 13, 1002-1014.
45. Yi, Y. & Jack, T. (1998) Plant Cell 10, 1465-1477.
46. Ren, D., Collingwood, T. N., Rebar, E. J., Wolffe, A. P. & Camp, H. S. (2002) Genes Dev. 16, 27-32.
47. Zhu, T. & Wang, X. (2000.) Plant Physiol. 124, 1472-1476.
48. Akagi, K., Kanai, M., Saya, H., Kozu, T. & Berns, A. (2001) Nucleic Acids Res. 29, 1-5.
49. Beerli, R. R., Schopfer, U., Dreier, B. & Barbas, C. F., III (2000) J. Biol. Chem. 275, 32617-32627.
50. Ordiz, M. I., Barbas, C. F., III, & Beachy, R. N. (2002) Proc. Natl. Acad. Sci. USA 99, 13290-13295.