Phylogenetic position of Blastocystis hominis and of stramenopiles inferred from multiple molecular sequence data

Journal of Eukaryotic Microbiology

Volumn 49, Issue 1, 2002, Pages 42-53

  Arisue, Nobuko ^a   Hashimoto, Tetsuo ^a,b   Yoshikawa, Hisao ^c   Nakamura, Yoshifflro ^d   Nakamura, Gen ^b,e   Nakamura, Fuminori ^c   Yano, Taka Aki ^d   Hasegawa, Masami ^a,b  

^a GRADUATE UNIVERSITY FOR ADVANCED STUDIES   (Japan)

^b INSTITUTE OF STATISTICAL MATHEMATICS   (Japan)

^c NARA WOMEN'S UNIVERSITY   (Japan)

^d SHOWA UNIVERSITY   (Japan)

^e KOGAKUIN UNIVERSITY   (Japan)

Author keywords

Cytosolic type 70 kDa heat shock protein; Eukaryotic phylogeny; Non catalytic 'B' subunit of vacuolar ATPase; Small subunit ribosomal RNA; Translation elongation factor 2

Indexed keywords

PHYLOGENY;

ALVEOLATA; BLASTOCYSTIS; BLASTOCYSTIS HOMINIS; CAVIA PORCELLUS; EUKARYOTA; PLASMODIUM FALCIPARUM; PROTOZOA; STRAMENOPILES; SUS SCROFA;

EID: 0036121932     PISSN: 10665234     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1550-7408.2002.tb00339.x     Document Type: Article

References (57)

1. The biology of Giardia spp.
2. A search for the origins of animals and fungi: Comparing and combining molecular data
3. Origin and evolution of the slime molds (Mycetozoa)
4. Animals and fungi are each other's closest relatives: Congruent evidence from multiple proteins
5. A kingdom-level phylogeny of eukaryotes based on combined protein data
6. Blastocystis in humans and animals: Morphology, biology, and epidemiology
7. Blastocystis hominis n. sp. et formes voisines
8. The kingdom Chromista: Origin and systematics
9. Critical analysis of eukaryotic phylogeny: A case study based on the HSP70 family
10. Likelihood based tests of topologies in phylogenetics
11. The ultrastructure of Reticulosphaera socialis Grell (Heterokontophyta)
12. Early branchings in the evolution of eukaryotes: Ancient divergence of Entamoeba that lacks mitochondria revealed by protein sequence data
13. Early evolution of eukaryotes inferred from protein phylogenies of translation elongation factors 1α and 2
14. Secondary absence of mitochondria in Giardia lamblia and Trichomonas vaginalis revealed by valyl-tRNA synthetase phylogeny
15. Microsporidia are related to fungi: Evidence from the largest subunit of RNA polymerase II and other proteins
16. Blastocystis elongation factor-1[alpha]: Genomic organization, taxonomy and phylogenetic relationships
17. Analysis of consensus sequence patterns in Giardia cytoskeleton gene promoters
18. Hidden Markov models for sequence analysis: Extension and analysis of the basic method
19. Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family
20. Evidence from beta-tubulin phylogeny that microsporidia evolved from within the fungi
21. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in hominoidea
22. Maximum likelihood inference of protein phylogeny and the origin of chloroplasts
23. An analysis of 5′-noncoding sequences from 699 vertebrate messenger RNAs
24. Phylogenetic position of Dictyostelium inferred from multiple protein data sets
25. 16S-like rDNA sequences from Developayella elegans, Labyrinthuloides haliotidis, and Proteromonas lacertae confirm that the stramenopiles are a primarily heterotrophic group
26. Unusually high evolutionary rate of the elongation factor 1α genes from the Ciliophora and its impact on the phylogeny of eukaryotes
27. The origin of red algae and the evolution of chloroplasts
28. Synonymous codon choices in the extremely GC-poor genome of Plasmodium falciparum: Compositional constraints and translational selection
29. Phylogenetic position of Blastocystis hominis that contains cytochrome-free mitochondria, inferred from the protein phylogeny of elongation factor 1α
30. Phylogenetic relationship of the kingdoms Animalia, Plantae, and Fungi, inferred from 23 different protein species
31. Stramenopiles: Chromophytes from a protistan perspective
32. Ultrastructural localization of giardins to the edges of disk microribbons of Giardia lamblia and the nucleotide and deduced protein sequence of alpha giardin
33. The molecular phylogeny of Eukaryota: Solid facts and uncertainties
34. How good are deep phylogenetic trees?
35. Comparison of molecular and paleontological data in diatoms suggests a major gap in the fossil record
36. Early-branching or fast-evolving eukaryotes? An answer based on slowly evolving positions
37. An evaluation of elongation factor 1α as a phylogenetic marker for eukaryotes
38. Multiple comparisons of log-likelihoods with applications to phylogenetic inference
39. CONSEL: A program for assessing the confidence of phylogenetic tree selection
40. Human parasite fines taxonomic home
41. Evolution of the protists and protistan parasites from the perspective of molecular systematics
42. Blastocystis hominis revisited
43. Large-subunit rRNA sequence of the chytridiomycete Blastocladiella emersonii, and implications for the evolution of zoosporic fungi
44. Complete large subunit ribosomal RNA sequences from the heterokont algae Ochromonas danica, Nannochloropsis salina, and Tribonema aequale, and phylogenetic analysis
45. Structure of the large subunit rDNA from a diatom, and comparison between small and large subunit ribosomal RNA for studying stramenopile evolution
46. The phylogeny of the Hyphochytriomycota as deduced from ribosomal RNA sequences of Hyphochytrium catenoides
47. Evolutionary relationships among the eukaryotic crown taxa taking into account site-to-site rate variation in 18S rRNA
48. The evolution of stramenopiles and alveolates as derived by "substitution rate calibration" of small ribosomal subunit RNA
49. An updated and comprehensive rRNA phylogeny of (crown) eukaryotes based on rate-calibrated evolutionary distances
50. Monophyletic origins of the metazoa: An evolutionary link with fungi
51. Among-site rate variation and its impact on phylogenetic analyses
52. PAML: A program package for phylogenetic analysis by maximum likelihood
53. Histochemical detection of carbohydrates of Blastocystis hominis
54. Studies of Blastocystis hominis
55. Blastocystis hominis - Past and future