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Volumn 32, Issue 1, 1999, Pages 11-16

Universal replication biases in bacteria

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; BACTERIAL PROTEIN; NUCLEOTIDE;

EID: 0032910674     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.1999.01334.x     Document Type: Article
Times cited : (162)

References (29)
  • 2
    • 0028004414 scopus 로고
    • Intrinsic and extrinsic approaches for detecting genes in a bacterial genome
    • Borodovski, M., Rudd, K.E., and Koonin, E.V. (1994) Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Nucleic Acids Res 22: 4756-4767.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4756-4767
    • Borodovski, M.1    Rudd, K.E.2    Koonin, E.V.3
  • 3
    • 0024276903 scopus 로고
    • When polymerases collide: Replication and the transcriptional organization of the E. Coli chromosome
    • Brewer, B. (1988) When polymerases collide: replication and the transcriptional organization of the E. coli chromosome. Cell 53: 679-686.
    • (1988) Cell , vol.53 , pp. 679-686
    • Brewer, B.1
  • 4
    • 16044367245 scopus 로고    scopus 로고
    • Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii
    • Bult, C.J., White, O., Olsen, G.J., Zhou, L., Fleischmann, R.D., et al. (1996) Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii. Science 273: 1058-1072.
    • (1996) Science , vol.273 , pp. 1058-1072
    • Bult, C.J.1    White, O.2    Olsen, G.J.3    Zhou, L.4    Fleischmann, R.D.5
  • 5
    • 0032508046 scopus 로고    scopus 로고
    • Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    • Cole, S.T., Brosch, R., Parkhill, J., Garnier, T., Churcher, C., et al. (1998) Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393: 537-544.
    • (1998) Nature , vol.393 , pp. 537-544
    • Cole, S.T.1    Brosch, R.2    Parkhill, J.3    Garnier, T.4    Churcher, C.5
  • 6
    • 0000228203 scopus 로고
    • A model of evolutionary change in proteins
    • Dayhoff, M.O. (ed.). Washington, DC: National Biomedical Research Foundation
    • Dayhoff, M.O., Schwartz, R.M., and Orcutt, B.C. (1978) A model of evolutionary change in proteins. In Atlas of Protein Sequence and Structure, Vol. 5. Dayhoff, M.O. (ed.). Washington, DC: National Biomedical Research Foundation, pp. 345-352.
    • (1978) Atlas of Protein Sequence and Structure , vol.5 , pp. 345-352
    • Dayhoff, M.O.1    Schwartz, R.M.2    Orcutt, B.C.3
  • 7
    • 0032568375 scopus 로고    scopus 로고
    • The complete genome of the hyperthermophilic bacterium Aquifex aeolicus
    • Deckert, G., Warren, P.V., Gaasterland, T., Young, W.G., Lenox, A.L., et al. (1998) The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 26: 353-358.
    • (1998) Nature , vol.26 , pp. 353-358
    • Deckert, G.1    Warren, P.V.2    Gaasterland, T.3    Young, W.G.4    Lenox, A.L.5
  • 8
    • 0000764772 scopus 로고
    • The use of multiple measurements in taxonomic problems
    • Fisher, R.A. (1936) The use of multiple measurements in taxonomic problems. Ann Eugen 7: 179-188.
    • (1936) Ann Eugen , vol.7 , pp. 179-188
    • Fisher, R.A.1
  • 9
    • 0029653518 scopus 로고
    • Whole-genome random sequencing and assembly of Haemophilus influenzae Rd
    • Fleischmann, R.D., Adams, M.D., White, O., Clayton, R.A., Kirkness, E.F., et al. (1995) Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. Science 269: 496-512.
    • (1995) Science , vol.269 , pp. 496-512
    • Fleischmann, R.D.1    Adams, M.D.2    White, O.3    Clayton, R.A.4    Kirkness, E.F.5
  • 10
    • 0030976320 scopus 로고    scopus 로고
    • Strand asymmetries in DNA evolution
    • Francino, M.P., and Ochman, H. (1997) Strand asymmetries in DNA evolution. Trends Genet 13: 240-245.
    • (1997) Trends Genet , vol.13 , pp. 240-245
    • Francino, M.P.1    Ochman, H.2
  • 11
    • 0031470826 scopus 로고    scopus 로고
    • Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi
    • Fraser, C.M., Casjens, S., Huang, W.M., Sutton, G.G., Clayton, R., et al. (1997) Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi. Nature 390: 580-586.
    • (1997) Nature , vol.390 , pp. 580-586
    • Fraser, C.M.1    Casjens, S.2    Huang, W.M.3    Sutton, G.G.4    Clayton, R.5
  • 13
    • 0032540874 scopus 로고    scopus 로고
    • Complete genome sequence of Treponema pallidum the syphilis spirochete
    • Fraser, C.M., Norris, S.J., Weinstock, G.M., White, O., Sutton, G.G., et al. (1998) Complete genome sequence of Treponema pallidum the syphilis spirochete. Science 281: 375-388.
    • (1998) Science , vol.281 , pp. 375-388
    • Fraser, C.M.1    Norris, S.J.2    Weinstock, G.M.3    White, O.4    Sutton, G.G.5
  • 15
    • 0032524384 scopus 로고    scopus 로고
    • Analyzing genomes with cumulative skew diagrams
    • Grigoriev, A. (1998) Analyzing genomes with cumulative skew diagrams. Nucleic Acids Res 26: 2286-2290.
    • (1998) Nucleic Acids Res , vol.26 , pp. 2286-2290
    • Grigoriev, A.1
  • 16
  • 17
    • 0030606607 scopus 로고    scopus 로고
    • Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp strain PCC6803
    • Kaneko, T., Sato, S., Kotani, H., Tanaka, A., Asamizu, E., et al. (1996) Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp strain PCC6803. DNA Res 3: 109-136.
    • (1996) DNA Res , vol.3 , pp. 109-136
    • Kaneko, T.1    Sato, S.2    Kotani, H.3    Tanaka, A.4    Asamizu, E.5
  • 18
    • 0030886877 scopus 로고    scopus 로고
    • Systematic base composition variation around the genome of Mycoplasma genitalium, but not Mycoplasma pneumoniae
    • Kerr, A.R.W., Peden, J.F., and Sharp, P.M. (1997) Systematic base composition variation around the genome of Mycoplasma genitalium, but not Mycoplasma pneumoniae. Mol Microbiol 25: 1177.
    • (1997) Mol Microbiol , vol.25 , pp. 1177
    • Kerr, A.R.W.1    Peden, J.F.2    Sharp, P.M.3
  • 19
    • 0031458333 scopus 로고    scopus 로고
    • The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus
    • Klenk, H.-P., Clayton, R.A., Tomb, J.F., White, O., Nelson, K.E., et al. (1997) The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus. Nature 390: 364-370.
    • (1997) Nature , vol.390 , pp. 364-370
    • Klenk, H.-P.1    Clayton, R.A.2    Tomb, J.F.3    White, O.4    Nelson, K.E.5
  • 20
    • 0030731108 scopus 로고    scopus 로고
    • The complete genome sequence of the Gram-positive bacterium Bacillus subtilis
    • Kunst, F., Ogasawara, N., Moszer, I., Albertini, A.M., Alloni, G., et al. (1997) The complete genome sequence of the Gram-positive bacterium Bacillus subtilis. Nature 390: 249-256.
    • (1997) Nature , vol.390 , pp. 249-256
    • Kunst, F.1    Ogasawara, N.2    Moszer, I.3    Albertini, A.M.4    Alloni, G.5
  • 21
    • 0029985398 scopus 로고    scopus 로고
    • Asymmetric substitution patterns in the two DNA strands of bacteria
    • Lobry, J.R. (1996) Asymmetric substitution patterns in the two DNA strands of bacteria. Mol Biol Evol 13: 660-665.
    • (1996) Mol Biol Evol , vol.13 , pp. 660-665
    • Lobry, J.R.1
  • 22
    • 0032169578 scopus 로고    scopus 로고
    • Replicational and transcriptional selection on codon usage in Borrelia burgdorferi
    • McInerney, J.O. (1998) Replicational and transcriptional selection on codon usage in Borrelia burgdorferi. Proc Natl Acad Sci USA 95: 10698-10703.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 10698-10703
    • McInerney, J.O.1
  • 23
    • 0026777126 scopus 로고
    • Prokaryotic DNA replication
    • Marians, K.J. (1992) Prokaryotic DNA replication. Annu Rev Biochem 61: 673-719.
    • (1992) Annu Rev Biochem , vol.61 , pp. 673-719
    • Marians, K.J.1
  • 24
    • 0032584101 scopus 로고    scopus 로고
    • Strand compositional asymmetry in bacterial and large viral genomes
    • Mrázek, J., and Karlin, S. (1998) Strand compositional asymmetry in bacterial and large viral genomes. Proc Natl Acad Sci USA 95: 3720-3725.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 3720-3725
    • Mrázek, J.1    Karlin, S.2
  • 25
    • 0013596021 scopus 로고
    • The guanine and cytosine content of genomic DNA and bacterial evolution
    • Muto, A., and Osawa, S. (1987) The guanine and cytosine content of genomic DNA and bacterial evolution. Proc Natl Acad Sci USA 84: 166-169.
    • (1987) Proc Natl Acad Sci USA , vol.84 , pp. 166-169
    • Muto, A.1    Osawa, S.2
  • 27
    • 15644383855 scopus 로고    scopus 로고
    • Complete genome sequence of Methanobacterium thermoautotrophicum ΔH: Functional analysis and comparative genomics
    • Smith, D.R., Doucette-Stamm, L.A., Deloughery, C., Lee, H., Dubois, J., et al. (1997) Complete genome sequence of Methanobacterium thermoautotrophicum ΔH: functional analysis and comparative genomics. J Bacteriol 179: 7135-7155.
    • (1997) J Bacteriol , vol.179 , pp. 7135-7155
    • Smith, D.R.1    Doucette-Stamm, L.A.2    Deloughery, C.3    Lee, H.4    Dubois, J.5
  • 28
    • 0032561496 scopus 로고    scopus 로고
    • Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis
    • Stephens, R.S., Kalman, S., Lammel, C., Fan, J., Marathe, R., Aravind, L., et al. (1998) Genome sequence of an obligate intracellular pathogen of humans: Chlamydia trachomatis. Science 282: 754-759.
    • (1998) Science , vol.282 , pp. 754-759
    • Stephens, R.S.1    Kalman, S.2    Lammel, C.3    Fan, J.4    Marathe, R.5    Aravind, L.6
  • 29
    • 0030835739 scopus 로고    scopus 로고
    • The complete genome sequence of the gastric pathogen Helicobacter pylori
    • Tomb, J.-F., White, O., Kerlavage, A.R., Clayton, R.A., Sutton, G.G., et al. (1997) The complete genome sequence of the gastric pathogen Helicobacter pylori. Nature 388: 539-547.
    • (1997) Nature , vol.388 , pp. 539-547
    • Tomb, J.-F.1    White, O.2    Kerlavage, A.R.3    Clayton, R.A.4    Sutton, G.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.