메뉴 건너뛰기




Volumn 102, Issue 23, 2018, Pages 10193-10208

Analysis of differentially upregulated proteins in ptsHIcrr − and rppH − mutants in Escherichia coli during an adaptive laboratory evolution experiment

Author keywords

Escherichia coli PTS ; GalP; MglB; Proteomic analysis; rppH; Short term adaptive laboratory evolution

Indexed keywords

AMINO ACIDS; BIOCHEMISTRY; DETOXIFICATION; ESCHERICHIA COLI; GLUCOSE; METABOLIC ENGINEERING; METABOLISM; PROTEINS;

EID: 85054500127     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-018-9397-3     Document Type: Article
Times cited : (11)

References (52)
  • 1
    • 84864811749 scopus 로고    scopus 로고
    • Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system
    • Aguilar C, Escalante A, Flores N, de Anda R, Riveros-McKay F, Gosset G, Morett E, Bolívar F (2012) Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system. BMC Genomics 13:385. 10.1186/1471-2164-13-385
    • (2012) BMC Genomics , vol.13 , pp. 385
    • Aguilar, C.1    Escalante, A.2    Flores, N.3    de Anda, R.4    Riveros-McKay, F.5    Gosset, G.6    Morett, E.7    Bolívar, F.8
  • 2
    • 84948951756 scopus 로고    scopus 로고
    • Deletion of the 2-acyl-glycerophosphoethanolamine cycle improve glucose metabolism in Escherichia coli strains employed for overproduction of aromatic compounds
    • Aguilar C, Flores N, Riveros-McKay F, Sahonero-Canavesi D, Carmona SB, Geiger O, Escalante A, Bolívar F (2015) Deletion of the 2-acyl-glycerophosphoethanolamine cycle improve glucose metabolism in Escherichia coli strains employed for overproduction of aromatic compounds. Microb Cell Factories 14:1–18. 10.1186/s12934-015-0382-6
    • (2015) Microb Cell Factories , vol.14 , pp. 1-18
    • Aguilar, C.1    Flores, N.2    Riveros-McKay, F.3    Sahonero-Canavesi, D.4    Carmona, S.B.5    Geiger, O.6    Escalante, A.7    Bolívar, F.8
  • 5
    • 84865779683 scopus 로고    scopus 로고
    • Regulation of the histidine utilization (hut) system in bacteria
    • Bender RA (2012) Regulation of the histidine utilization (hut) system in bacteria. Microbiol Mol Biol Rev 76:565–584. 10.1128/MMBR.00014-12
    • (2012) Microbiol Mol Biol Rev , vol.76 , pp. 565-584
    • Bender, R.A.1
  • 6
    • 84937414415 scopus 로고    scopus 로고
    • Inactivation of the PTS as a strategy to engineer the production of aromatic metabolites in Escherichia coli
    • Carmona SB, Moreno F, Bolívar F, Gosset G, Escalante A (2015) Inactivation of the PTS as a strategy to engineer the production of aromatic metabolites in Escherichia coli. J Mol Microbiol Biotechnol 25:195–208. 10.1159/000380854
    • (2015) J Mol Microbiol Biotechnol , vol.25 , pp. 195-208
    • Carmona, S.B.1    Moreno, F.2    Bolívar, F.3    Gosset, G.4    Escalante, A.5
  • 7
    • 85028364624 scopus 로고    scopus 로고
    • Effect of the RNA pyrophosphohydrolase RppH on envelope integrity in Escherichia coli
    • Choi U, Park Y-H, Kim Y-R, Seok Y-J, Lee C-R (2017) Effect of the RNA pyrophosphohydrolase RppH on envelope integrity in Escherichia coli. FEMS Microbiol Lett 364:1–7. 10.1093/femsle/fnx152
    • (2017) FEMS Microbiol Lett , vol.364 , pp. 1-7
    • Choi, U.1    Park, Y.-H.2    Kim, Y.-R.3    Seok, Y.-J.4    Lee, C.-R.5
  • 8
    • 0021195497 scopus 로고
    • Metabolism of methylglyoxal in microorganisms
    • Cooper RA (1984) Metabolism of methylglyoxal in microorganisms. Annu Rev Microbiol 38:49–68. 10.1146/annurev.mi.38.100184.000405
    • (1984) Annu Rev Microbiol , vol.38 , pp. 49-68
    • Cooper, R.A.1
  • 9
    • 0000544768 scopus 로고
    • The formation and catabolism of methylglyoxal during glycolysis in Escherichia coli
    • Cooper RA, Anderson A (1970) The formation and catabolism of methylglyoxal during glycolysis in Escherichia coli. FEBS Lett 11:273–276. 10.1016/0014-5793(70)80546-4
    • (1970) FEBS Lett , vol.11 , pp. 273-276
    • Cooper, R.A.1    Anderson, A.2
  • 10
    • 0034612342 scopus 로고    scopus 로고
    • One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
    • Datsenko KA, Wanner BL (2000) One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. Proc Natl Acad Sci U S A 97:6640–6645. 10.1073/pnas.120163297
    • (2000) Proc Natl Acad Sci U S A , vol.97 , pp. 6640-6645
    • Datsenko, K.A.1    Wanner, B.L.2
  • 12
    • 38349117689 scopus 로고    scopus 로고
    • The bacterial enzyme RppH triggers messenger RNA degradation by 5′ pyrophosphate removal
    • Deana A, Celesnik H, Belasco JG (2008) The bacterial enzyme RppH triggers messenger RNA degradation by 5′ pyrophosphate removal. Nature 451:355–358. 10.1038/nature06475
    • (2008) Nature , vol.451 , pp. 355-358
    • Deana, A.1    Celesnik, H.2    Belasco, J.G.3
  • 13
    • 0027457784 scopus 로고
    • Derepression of LamB protein facilitates outer membrane permeation of carbohydrates into Escherichia coli under conditions of nutrient stress
    • COI: 1:CAS:528:DyaK3sXhs1Cquro%3D
    • Death A, Notley L, Ferenci T (1993) Derepression of LamB protein facilitates outer membrane permeation of carbohydrates into Escherichia coli under conditions of nutrient stress. J Bacteriol 175:1475–1483
    • (1993) J Bacteriol , vol.175 , pp. 1475-1483
    • Death, A.1    Notley, L.2    Ferenci, T.3
  • 14
    • 0034733718 scopus 로고    scopus 로고
    • Sugar transport through maltoporin of Escherichia coli: role of polar tracks
    • Dumas F, Koebnik R, Winterhalter M, Van Gelder P (2000) Sugar transport through maltoporin of Escherichia coli: role of polar tracks. J Biol Chem 275:19747–19751. 10.1074/jbc.M000268200
    • (2000) J Biol Chem , vol.275 , pp. 19747-19751
    • Dumas, F.1    Koebnik, R.2    Winterhalter, M.3    Van Gelder, P.4
  • 15
    • 84867322381 scopus 로고    scopus 로고
    • Current knowledge of the Escherichia coli phosphoenolpyruvate–carbohydrate phosphotransferase system: peculiarities of regulation and impact on growth and product formation
    • Escalante A, Salinas Cervantes A, Gosset G, Bolívar F (2012) Current knowledge of the Escherichia coli phosphoenolpyruvate–carbohydrate phosphotransferase system: peculiarities of regulation and impact on growth and product formation. Appl Microbiol Biotechnol 94:1483–1494. 10.1007/s00253-012-4101-5
    • (2012) Appl Microbiol Biotechnol , vol.94 , pp. 1483-1494
    • Escalante, A.1    Salinas Cervantes, A.2    Gosset, G.3    Bolívar, F.4
  • 16
    • 27644542712 scopus 로고    scopus 로고
    • Comparative proteomics using 2-D gel electrophoresis and mass spectrometry as tools to dissect stimulons and regulons in bacteria with sequenced or partially sequenced genomes
    • Encarnación S, Hernández M, Martínez-Batallar G, Contreras S, Vargas M del C, Mora J (2005) Comparative proteomics using 2-D gel electrophoresis and mass spectrometry as tools to dissect stimulons and regulons in bacteria with sequenced or partially sequenced genomes. Biol Proced Online 7:117–135. 10.1251/bpo110
    • (2005) Biological Procedures Online , vol.7 , Issue.1 , pp. 117-135
    • Encarnación, S.1    Hernández, M.2    Martínez-Batallar, G.3    Contreras, S.4    Vargas, M.C.5    Mora, J.6
  • 17
    • 0035209724 scopus 로고    scopus 로고
    • Hungry bacteria–definition and properties of a nutritional state
    • COI: 1:CAS:528:DC%2BD3MXpt1WjtLw%3D
    • Ferenci T (2001) Hungry bacteria–definition and properties of a nutritional state. Environ Microbiol 3:605–611 https://doi-org.biblioteca.ibt.unam.mx:8080/10.1046/j.1462-2920.2001.00238.x
    • (2001) Environ Microbiol , vol.3 , pp. 605-611
    • Ferenci, T.1
  • 18
    • 0029959052 scopus 로고    scopus 로고
    • Pathway engineering for the production of aromatic compounds in Escherichia coli
    • Flores N, Xiao J, Berry A, Bolivar F, Valle F (1996) Pathway engineering for the production of aromatic compounds in Escherichia coli. Nat Biotechnol 14:620–623. 10.1038/nbt0596-620
    • (1996) Nat Biotechnol , vol.14 , pp. 620-623
    • Flores, N.1    Xiao, J.2    Berry, A.3    Bolivar, F.4    Valle, F.5
  • 20
    • 15244348667 scopus 로고    scopus 로고
    • Adaptation for fast growth on glucose by differential expression of central carbon metabolism and gal regulon genes in an Escherichia coli strain lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system
    • Flores N, Flores S, Escalante A, de Anda R, Leal L, Malpica R, Georgellis D, Gosset G, Bolívar F (2005) Adaptation for fast growth on glucose by differential expression of central carbon metabolism and gal regulon genes in an Escherichia coli strain lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system. Metab Eng 7:70–87. 10.1016/j.ymben.2004.10.002
    • (2005) Metab Eng , vol.7 , pp. 70-87
    • Flores, N.1    Flores, S.2    Escalante, A.3    de Anda, R.4    Leal, L.5    Malpica, R.6    Georgellis, D.7    Gosset, G.8    Bolívar, F.9
  • 21
    • 38449090698 scopus 로고    scopus 로고
    • Growth recovery on glucose under aerobic conditions of an Escherichia coli strain carrying a phosphoenolpyruvate:carbohydrate phosphotransferase system deletion by inactivating arcA and overexpressing the genes coding for glucokinase and galactose permease
    • Flores N, Leal L, Sigala JC, de Anda R, Escalante A, Martínez A, Ramírez OT, Gosset G, Bolivar F (2007) Growth recovery on glucose under aerobic conditions of an Escherichia coli strain carrying a phosphoenolpyruvate:carbohydrate phosphotransferase system deletion by inactivating arcA and overexpressing the genes coding for glucokinase and galactose permease. J Mol Microbiol Biotechnol 13:105–116. 10.1159/000103602
    • (2007) J Mol Microbiol Biotechnol , vol.13 , pp. 105-116
    • Flores, N.1    Leal, L.2    Sigala, J.C.3    de Anda, R.4    Escalante, A.5    Martínez, A.6    Ramírez, O.T.7    Gosset, G.8    Bolivar, F.9
  • 22
    • 33746061277 scopus 로고    scopus 로고
    • Global gene expression in Escherichia coli K-12 during short-term and long-term adaptation to glucose-limited continuous culture conditions
    • Franchini AG (2006) Global gene expression in Escherichia coli K-12 during short-term and long-term adaptation to glucose-limited continuous culture conditions. Microbiology 152:2111–2127. 10.1099/mic.0.28939-0
    • (2006) Microbiology , vol.152 , pp. 2111-2127
    • Franchini, A.G.1
  • 23
    • 26844512919 scopus 로고    scopus 로고
    • Improvement of Escherichia coli production strains by modification of the phosphoenolpyruvate: sugar phosphotransferase system
    • Gosset G (2005) Improvement of Escherichia coli production strains by modification of the phosphoenolpyruvate: sugar phosphotransferase system. Microb Cell Factories 4:14. 10.1186/1475-2859-4-14
    • (2005) Microb Cell Factories , vol.4 , pp. 14
    • Gosset, G.1
  • 24
    • 0026330981 scopus 로고
    • Trehalose synthesis genes are controlled by the putative sigma factor encoded by rpoS and are involved in stationary-phase thermotolerance in Escherichia coli
    • Hengge-Aronis R, Klein W, Lange R, Rimmele M, Boos W (1991) Trehalose synthesis genes are controlled by the putative sigma factor encoded by rpoS and are involved in stationary-phase thermotolerance in Escherichia coli. J Bacteriol 173:7918–7924. 10.1128/jb.173.24.7918-7924.1991
    • (1991) J Bacteriol , vol.173 , pp. 7918-7924
    • Hengge-Aronis, R.1    Klein, W.2    Lange, R.3    Rimmele, M.4    Boos, W.5
  • 25
    • 0043023507 scopus 로고    scopus 로고
    • Expression of galP and glk in a Escherichia coli PTS mutant restores glucose transport and increases glycolytic flux to fermentation products
    • Hernández-Montalvo V, Martínez A, Hernández-Chavez G, Bolivar F, Valle F, Gosset G (2003) Expression of galP and glk in a Escherichia coli PTS mutant restores glucose transport and increases glycolytic flux to fermentation products. Biotechnol Bioeng 83:687–694. 10.1002/bit.10702
    • (2003) Biotechnol Bioeng , vol.83 , pp. 687-694
    • Hernández-Montalvo, V.1    Martínez, A.2    Hernández-Chavez, G.3    Bolivar, F.4    Valle, F.5    Gosset, G.6
  • 27
    • 85017170162 scopus 로고    scopus 로고
    • Decreased expression of stable RNA can alleviate the lethality associated with RNase E deficiency in Escherichia coli
    • Himabindu P, Anupama K (2017) Decreased expression of stable RNA can alleviate the lethality associated with RNase E deficiency in Escherichia coli. J Bacteriol 199:e00724–e00716. 10.1128/JB.00724-16
    • (2017) J Bacteriol , vol.199 , pp. e716-e724
    • Himabindu, P.1    Anupama, K.2
  • 29
    • 77955969370 scopus 로고    scopus 로고
    • The Rut pathway for pyrimidine degradation: novel chemistry and toxicity problems
    • Kim K-S, Pelton JG, Inwood WB, Andersen U, Kustu S, Wemmer DE (2010) The Rut pathway for pyrimidine degradation: novel chemistry and toxicity problems. J Bacteriol 192:4089–4102. 10.1128/JB.00201-10
    • (2010) J Bacteriol , vol.192 , pp. 4089-4102
    • Kim, K.-S.1    Pelton, J.G.2    Inwood, W.B.3    Andersen, U.4    Kustu, S.5    Wemmer, D.E.6
  • 30
    • 85021315281 scopus 로고    scopus 로고
    • A novel RNA phosphorylation state enables 5′ end-dependent degradation in Escherichia coli
    • Luciano DJ, Vasilyev N, Richards J, Serganov A, Belasco JG (2017) A novel RNA phosphorylation state enables 5′ end-dependent degradation in Escherichia coli. Mol Cell 67:44–54.e6. 10.1016/j.molcel.2017.05.035
    • (2017) Mol Cell , vol.67 , pp. 44-54
    • Luciano, D.J.1    Vasilyev, N.2    Richards, J.3    Serganov, A.4    Belasco, J.G.5
  • 31
    • 85047662922 scopus 로고    scopus 로고
    • Importance of a diphosphorylated intermediate for RppH-dependent RNA degradation
    • Luciano DJ, Vasilyev N, Richards J, Serganov A, Belasco JG (2018) Importance of a diphosphorylated intermediate for RppH-dependent RNA degradation. RNA Biol 0:1–4. 10.1080/15476286.2018.1460995
    • (2018) RNA Biol , pp. 1-4
    • Luciano, D.J.1    Vasilyev, N.2    Richards, J.3    Serganov, A.4    Belasco, J.G.5
  • 32
    • 85053361330 scopus 로고    scopus 로고
    • Transcriptomic and proteomic analysis of Oenococcus oeni adaptation to wine stress conditions
    • Margalef-Català M, Araque I, Bordons A, Reguant C, Bautista-Gallego J (2016) Transcriptomic and proteomic analysis of Oenococcus oeni adaptation to wine stress conditions. Front Microbiol 7:1554. 10.3389/fmicb.2016.01554
    • (2016) Front Microbiol , vol.7 , pp. 1554
    • Margalef-Català, M.1    Araque, I.2    Bordons, A.3    Reguant, C.4    Bautista-Gallego, J.5
  • 33
    • 39749112439 scopus 로고    scopus 로고
    • Coutilization of glucose and glycerol enhances the production of aromatic compounds in an Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system
    • Martínez K, de AR, Hernández G, Escalante A, Gosset G, Ramírez OT, Bolívar FG (2008) Coutilization of glucose and glycerol enhances the production of aromatic compounds in an Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system. Microb Cell Factories 7(1):1. 10.1186/1475-2859-7-1
    • (2008) Microb Cell Factories , vol.7 , Issue.1 , pp. 1
    • Martínez, K.1    de, A.R.2    Hernández, G.3    Escalante, A.4    Gosset, G.5    Ramírez, O.T.6    Bolívar, F.G.7
  • 34
    • 85011654981 scopus 로고    scopus 로고
    • Shikimic acid production in Escherichia coli: from classical metabolic engineering strategies to omics applied to improve its production
    • Martínez JA, Bolívar F, Escalante A (2015) Shikimic acid production in Escherichia coli: from classical metabolic engineering strategies to omics applied to improve its production. Front Bioeng Biotechnol 3:1–16. 10.3389/fbioe.2015.00145
    • (2015) Front Bioeng Biotechnol , vol.3 , pp. 1-16
    • Martínez, J.A.1    Bolívar, F.2    Escalante, A.3
  • 36
    • 85047937970 scopus 로고    scopus 로고
    • Adaptation to the coupling of glycolysis to toxic methylglyoxal production in tpiA deletion strains of Escherichia coli requires synchronized and counterintuitive genetic changes
    • McCloskey D, Xu S, Sandberg TE, Brunk E, Hefner Y, Szubin R, Feist AM, Palsson BO (2018a) Adaptation to the coupling of glycolysis to toxic methylglyoxal production in tpiA deletion strains of Escherichia coli requires synchronized and counterintuitive genetic changes. Metab Eng 48:82–93. 10.1016/j.ymben.2018.05.012
    • (2018) Metab Eng , vol.48 , pp. 82-93
    • McCloskey, D.1    Xu, S.2    Sandberg, T.E.3    Brunk, E.4    Hefner, Y.5    Szubin, R.6    Feist, A.M.7    Palsson, B.O.8
  • 37
    • 85048761909 scopus 로고    scopus 로고
    • Adaptive laboratory evolution resolves energy depletion to maintain high aromatic metabolite phenotypes in Escherichia coli strains lacking the phosphotransferase system
    • McCloskey D, Xu S, Sandberg TE, Brunk E, Hefner Y, Szubin R, Feist AM, Palsson BO (2018b) Adaptive laboratory evolution resolves energy depletion to maintain high aromatic metabolite phenotypes in Escherichia coli strains lacking the phosphotransferase system. Metab Eng 48:233–242. 10.1016/j.ymben.2018.06.005
    • (2018) Metab Eng , vol.48 , pp. 233-242
    • McCloskey, D.1    Xu, S.2    Sandberg, T.E.3    Brunk, E.4    Hefner, Y.5    Szubin, R.6    Feist, A.M.7    Palsson, B.O.8
  • 38
    • 0029207111 scopus 로고
    • Effect of hydrostatic pressure on the synthesis of outer membrane proteins in Escherichia coli
    • Nakashima K, Horikoshi K, Mizuno T (1995) Effect of hydrostatic pressure on the synthesis of outer membrane proteins in Escherichia coli. Biosci Biotechnol Biochem 59:130–132. 10.1271/bbb.59.130
    • (1995) Biosci Biotechnol Biochem , vol.59 , pp. 130-132
    • Nakashima, K.1    Horikoshi, K.2    Mizuno, T.3
  • 39
    • 4043108470 scopus 로고    scopus 로고
    • Regulation through the secondary channel—structural framework for ppGpp-DksA synergism during transcription
    • Perederina A, Svetlov V, Vassylyeva MN, Tahirov TH, Yokoyama S, Artsimovitch I, Vassylyev DG (2004) Regulation through the secondary channel—structural framework for ppGpp-DksA synergism during transcription. Cell 118:297–309. 10.1016/j.cell.2004.06.030
    • (2004) Cell , vol.118 , pp. 297-309
    • Perederina, A.1    Svetlov, V.2    Vassylyeva, M.N.3    Tahirov, T.H.4    Yokoyama, S.5    Artsimovitch, I.6    Vassylyev, D.G.7
  • 40
    • 0033434080 scopus 로고    scopus 로고
    • Probability-based protein identification by searching sequence databases using mass spectrometry data
    • Perkins DN, Pappin DJ, Creasy DM, Cottrell JS (1999) Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20:3551–3567. 10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2
    • (1999) Electrophoresis , vol.20 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.2    Creasy, D.M.3    Cottrell, J.S.4
  • 41
    • 0025981682 scopus 로고
    • Osmotic induction of the periplasmic trehalase in Escherichia coli K12: characterization of the treA gene promoter
    • COI: 1:CAS:528:DyaK3MXitVSls7k%3D
    • Repoila F, Gutierrez C (1991) Osmotic induction of the periplasmic trehalase in Escherichia coli K12: characterization of the treA gene promoter. Mol Microbiol 5:747–755 https://doi-org.biblioteca.ibt.unam.mx:8080/10.1111/j.1365-2958.1991.tb00745.x
    • (1991) Mol Microbiol , vol.5 , pp. 747-755
    • Repoila, F.1    Gutierrez, C.2
  • 42
  • 43
    • 84899622651 scopus 로고    scopus 로고
    • Physiological and transcriptional characterization of Escherichia coli strains lacking interconversion of phosphoenolpyruvate and pyruvate when glucose and acetate are coutilized
    • Sabido A, Sigala JC, Hernández-Chávez G, Flores N, Gosset G, Bolívar F (2014) Physiological and transcriptional characterization of Escherichia coli strains lacking interconversion of phosphoenolpyruvate and pyruvate when glucose and acetate are coutilized. Biotechnol Bioeng 111:1150–1160. 10.1002/bit.25177
    • (2014) Biotechnol Bioeng , vol.111 , pp. 1150-1160
    • Sabido, A.1    Sigala, J.C.2    Hernández-Chávez, G.3    Flores, N.4    Gosset, G.5    Bolívar, F.6
  • 45
    • 60149101397 scopus 로고    scopus 로고
    • Acetate metabolism in Escherichia coli strains lacking phosphoenolpyruvate: carbohydrate phosphotransferase system; evidence of carbon recycling strategies and futile cycles
    • Sigala JC, Flores S, Flores N, Aguilar C, de Anda R, Gosset G, Bolívar F (2009) Acetate metabolism in Escherichia coli strains lacking phosphoenolpyruvate: carbohydrate phosphotransferase system; evidence of carbon recycling strategies and futile cycles. J Mol Microbiol Biotechnol 16:224–235. 10.1159/000151219
    • (2009) J Mol Microbiol Biotechnol , vol.16 , pp. 224-235
    • Sigala, J.C.1    Flores, S.2    Flores, N.3    Aguilar, C.4    de Anda, R.5    Gosset, G.6    Bolívar, F.7
  • 46
    • 0036062240 scopus 로고    scopus 로고
    • pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli
    • Stancik LM, Stancik DM, Schmidt B, Barnhart DM, Yoncheva YN, Slonczewski JL (2002) pH-dependent expression of periplasmic proteins and amino acid catabolism in Escherichia coli. J Bacteriol 184:4246–4258. 10.1128/JB.184.15.4246-4258.2002
    • (2002) J Bacteriol , vol.184 , pp. 4246-4258
    • Stancik, L.M.1    Stancik, D.M.2    Schmidt, B.3    Barnhart, D.M.4    Yoncheva, Y.N.5    Slonczewski, J.L.6
  • 47
    • 84868620752 scopus 로고    scopus 로고
    • Glucose transport in Escherichia coli mutant strains with defects in sugar transport systems
    • Steinsiek S, Bettenbrock K (2012) Glucose transport in Escherichia coli mutant strains with defects in sugar transport systems. J Bacteriol 194:5897–5908. 10.1128/JB.01502-12
    • (2012) J Bacteriol , vol.194 , pp. 5897-5908
    • Steinsiek, S.1    Bettenbrock, K.2
  • 48
    • 77954484183 scopus 로고    scopus 로고
    • The universal protein resource (UniProt) in 2010
    • The UniProt Consortium (2010) The universal protein resource (UniProt) in 2010. Nucleic Acids Res 38:D142–D148. 10.1093/nar/gkp84
    • (2010) Nucleic Acids Res , vol.38 , pp. D142-D148
  • 49
    • 85054193571 scopus 로고    scopus 로고
    • DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli
    • Wang Q, Zhang D, Guan Z, Li D, Pei K, Liu J, Zou T, Yin P (2018) DapF stabilizes the substrate-favoring conformation of RppH to stimulate its RNA-pyrophosphohydrolase activity in Escherichia coli. Nucleic Acids Res 46:6880–6892. 10.1093/nar/gky528
    • (2018) Nucleic Acids Res , vol.46 , pp. 6880-6892
    • Wang, Q.1    Zhang, D.2    Guan, Z.3    Li, D.4    Pei, K.5    Liu, J.6    Zou, T.7    Yin, P.8
  • 50
    • 14244256556 scopus 로고    scopus 로고
    • Genome-wide analysis of the general stress response network in Escherichia coli: SigmaS-dependent genes, promoters, and sigma factor selectivity
    • Weber H, Polen T, Heuveling J, Wendisch VF, Hengge R (2005) Genome-wide analysis of the general stress response network in Escherichia coli: SigmaS-dependent genes, promoters, and sigma factor selectivity. J Bacteriol 187:1591–1603. 10.1128/JB.187.5.1591-1603.2005
    • (2005) J Bacteriol , vol.187 , pp. 1591-1603
    • Weber, H.1    Polen, T.2    Heuveling, J.3    Wendisch, V.F.4    Hengge, R.5
  • 51
    • 78651113725 scopus 로고
    • The formation of 2-keto-3-deoxyheptonic acid in extracts of Escherichia coli B
    • COI: 1:CAS:528:DyaG1MXntlSqsg%3D%3D, PID: 13654246
    • Weissbach A, Hurwitz J (1959) The formation of 2-keto-3-deoxyheptonic acid in extracts of Escherichia coli B. J Biol Chem 234:705–709
    • (1959) J Biol Chem , vol.234 , pp. 705-709
    • Weissbach, A.1    Hurwitz, J.2
  • 52
    • 0026762504 scopus 로고
    • osmY, a new hyperosmotically inducible gene, encodes a periplasmic protein in Escherichia coli
    • Yim HH, Villarejo M (1992) osmY, a new hyperosmotically inducible gene, encodes a periplasmic protein in Escherichia coli. J Bacteriol 174:3637–3644. 10.1128/jb.174.11.3637-3644.1992
    • (1992) J Bacteriol , vol.174 , pp. 3637-3644
    • Yim, H.H.1    Villarejo, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.