메뉴 건너뛰기




Volumn 47, Issue , 2018, Pages 423-433

An engineered Calvin-Benson-Bassham cycle for carbon dioxide fixation in Methylobacterium extorquens AM1

Author keywords

Autotrophy; Calvin Benson Bassham cycle; Carbon fixation; Methylobacterium extorquens AM1; Methylotrophy; RuBisCO

Indexed keywords

CARBON DIOXIDE; CARBON INORGANIC COMPOUNDS; METABOLISM; MOLECULAR BIOLOGY;

EID: 85046776402     PISSN: 10967176     EISSN: 10967184     Source Type: Journal    
DOI: 10.1016/j.ymben.2018.04.003     Document Type: Article
Times cited : (55)

References (71)
  • 1
    • 84883275474 scopus 로고    scopus 로고
    • Critical assessment of proteome-wide label-free absolute abundance estimation strategies
    • Ahrné E., Molzahn, L., Glatter, T., Schmidt, A., Critical assessment of proteome-wide label-free absolute abundance estimation strategies. Proteomics 13 (2013), 2567–2578.
    • (2013) Proteomics , vol.13 , pp. 2567-2578
    • Ahrné, E.1    Molzahn, L.2    Glatter, T.3    Schmidt, A.4
  • 2
    • 0025369520 scopus 로고
    • Nucleotide sequence of the Methylobacterium extorquens AM1 moxF and moxJ genes involved in methanol oxidation
    • Anderson, D.J., Morris, C.J., Nunn, D.N., Anthony, C., Lidstrom, M.E., Nucleotide sequence of the Methylobacterium extorquens AM1 moxF and moxJ genes involved in methanol oxidation. Gene 90 (1990), 173–176.
    • (1990) Gene , vol.90 , pp. 173-176
    • Anderson, D.J.1    Morris, C.J.2    Nunn, D.N.3    Anthony, C.4    Lidstrom, M.E.5
  • 4
    • 77952717854 scopus 로고    scopus 로고
    • Design and analysis of synthetic carbon fixation pathways
    • Bar-Even, A., Noor, E., Lewis, N.E., Milo, R., Design and analysis of synthetic carbon fixation pathways. Proc. Natl. Acad. Sci. USA 107 (2010), 8889–8894.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 8889-8894
    • Bar-Even, A.1    Noor, E.2    Lewis, N.E.3    Milo, R.4
  • 5
    • 85014611037 scopus 로고    scopus 로고
    • Design principles of autocatalytic cycles constrain enzyme kinetics and force low substrate saturation at flux branch points
    • Barenholz, U., Davidi, D., Reznik, E., Bar-On, Y., Antonovsky, N., Noor, E., Milo, R., Design principles of autocatalytic cycles constrain enzyme kinetics and force low substrate saturation at flux branch points. eLife, 6, 2017.
    • (2017) eLife , vol.6
    • Barenholz, U.1    Davidi, D.2    Reznik, E.3    Bar-On, Y.4    Antonovsky, N.5    Noor, E.6    Milo, R.7
  • 7
    • 85032546058 scopus 로고    scopus 로고
    • Methanol: The Basic Chemical and Energy Feedstock of the Future
    • Springer-Verlag Berlin, Heidelberg
    • Bertau, M., Offermanns, H., Plass, L., Schmidt, F., Wernicke, H.-J., Methanol: The Basic Chemical and Energy Feedstock of the Future. 2014, Springer-Verlag, Berlin, Heidelberg.
    • (2014)
    • Bertau, M.1    Offermanns, H.2    Plass, L.3    Schmidt, F.4    Wernicke, H.-J.5
  • 8
    • 52649161315 scopus 로고    scopus 로고
    • Comprehensive proteomics of Methylobacterium extorquens AM1 metabolism under single carbon and nonmethylotrophic conditions
    • Bosch, G., Skovran, E., Xia, Q., Wang, T., Taub, F., Miller, J.A., Lidstrom, M.E., Hackett, M., Comprehensive proteomics of Methylobacterium extorquens AM1 metabolism under single carbon and nonmethylotrophic conditions. Proteomics 8 (2008), 3494–3505.
    • (2008) Proteomics , vol.8 , pp. 3494-3505
    • Bosch, G.1    Skovran, E.2    Xia, Q.3    Wang, T.4    Taub, F.5    Miller, J.A.6    Lidstrom, M.E.7    Hackett, M.8
  • 9
    • 0015212072 scopus 로고
    • Phosphoglycolate production catalyzed by ribulose diphosphate carboxylase
    • Bowes, G., Ogren, W.L., Hageman, R.H., Phosphoglycolate production catalyzed by ribulose diphosphate carboxylase. Biochem. Biophys. Res. Commun. 45 (1971), 716–722.
    • (1971) Biochem. Biophys. Res. Commun. , vol.45 , pp. 716-722
    • Bowes, G.1    Ogren, W.L.2    Hageman, R.H.3
  • 10
    • 0017650651 scopus 로고
    • D-ribulose 1,5-bisphosphate carboxylase from Paracoccus denitrificans
    • Bowien, B., D-ribulose 1,5-bisphosphate carboxylase from Paracoccus denitrificans. FEMS Microbiol. Lett. 2 (1977), 263–266.
    • (1977) FEMS Microbiol. Lett. , vol.2 , pp. 263-266
    • Bowien, B.1
  • 11
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M.M., A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1976), 248–254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 12
    • 0028172819 scopus 로고
    • Genetics of the serine cycle in Methylobacterium extorquens AM1: cloning, sequence, mutation, and physiological effect of glyA, the gene for serine hydroxymethyltransferase
    • Chistoserdova, L.V., Lidstrom, M.E., Genetics of the serine cycle in Methylobacterium extorquens AM1: cloning, sequence, mutation, and physiological effect of glyA, the gene for serine hydroxymethyltransferase. J. Bacteriol. 176 (1994), 6759–6762.
    • (1994) J. Bacteriol. , vol.176 , pp. 6759-6762
    • Chistoserdova, L.V.1    Lidstrom, M.E.2
  • 13
    • 0029955349 scopus 로고    scopus 로고
    • Molecular characterization of a chromosomal region involved in the oxidation of acetyl-CoA to glyoxylate in the isocitrate-lyase-negative methylotroph Methylobacterium extorquens AM1
    • Chistoserdova, L.V., Lidstrom, M.E., Molecular characterization of a chromosomal region involved in the oxidation of acetyl-CoA to glyoxylate in the isocitrate-lyase-negative methylotroph Methylobacterium extorquens AM1. Microbiology 142 (1996), 1459–1468.
    • (1996) Microbiology , vol.142 , pp. 1459-1468
    • Chistoserdova, L.V.1    Lidstrom, M.E.2
  • 14
    • 33845514744 scopus 로고    scopus 로고
    • Bestowing inducibility on the cloned methanol dehydrogenase promoter (PmxaF) of Methylobacterium extorquens by applying regulatory elements of Pseudomonas putida F1
    • Choi, Y.J., Morel, L., Bourque, D., Mullick, A., Massie, B., Miguez, C.B., Bestowing inducibility on the cloned methanol dehydrogenase promoter (PmxaF) of Methylobacterium extorquens by applying regulatory elements of Pseudomonas putida F1. Appl. Environ. Microbiol. 72 (2006), 7723–7729.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 7723-7729
    • Choi, Y.J.1    Morel, L.2    Bourque, D.3    Mullick, A.4    Massie, B.5    Miguez, C.B.6
  • 15
    • 84877073280 scopus 로고    scopus 로고
    • A novel pair of inducible expression vectors for use in Methylobacterium extorquens
    • Chubiz, L.M., Purswani, J., Carroll, S.M., Marx, C.J., A novel pair of inducible expression vectors for use in Methylobacterium extorquens. BMC Res. Notes, 6, 2013, 183.
    • (2013) BMC Res. Notes , vol.6 , pp. 183
    • Chubiz, L.M.1    Purswani, J.2    Carroll, S.M.3    Marx, C.J.4
  • 17
    • 47249109471 scopus 로고    scopus 로고
    • Formate as the main branch point for methylotrophic metabolism in Methylobacterium extorquens AM1
    • Crowther, G.J., Kosaly, G., Lidstrom, M.E., Formate as the main branch point for methylotrophic metabolism in Methylobacterium extorquens AM1. J. Bacteriol. 190 (2008), 5057–5062.
    • (2008) J. Bacteriol. , vol.190 , pp. 5057-5062
    • Crowther, G.J.1    Kosaly, G.2    Lidstrom, M.E.3
  • 18
    • 84876965085 scopus 로고    scopus 로고
    • Development of an optimized medium, strain and high-throughput culturing methods for Methylobacterium extorquens
    • Delaney, N.F., Kaczmarek, M.E., Ward, L.M., Swanson, P.K., Lee, M.C., Marx, C.J., Development of an optimized medium, strain and high-throughput culturing methods for Methylobacterium extorquens. PLoS One, 8, 2013, e62957.
    • (2013) PLoS One , vol.8 , pp. e62957
    • Delaney, N.F.1    Kaczmarek, M.E.2    Ward, L.M.3    Swanson, P.K.4    Lee, M.C.5    Marx, C.J.6
  • 19
    • 80051941601 scopus 로고    scopus 로고
    • Engineered reversal of the beta-oxidation cycle for the synthesis of fuels and chemicals
    • Dellomonaco, C., Clomburg, J.M., Miller, E.N., Gonzalez, R., Engineered reversal of the beta-oxidation cycle for the synthesis of fuels and chemicals. Nature 476 (2011), 355–359.
    • (2011) Nature , vol.476 , pp. 355-359
    • Dellomonaco, C.1    Clomburg, J.M.2    Miller, E.N.3    Gonzalez, R.4
  • 21
    • 34547542453 scopus 로고    scopus 로고
    • Synthesis of C5-dicarboxylic acids from C2-units involving crotonyl-CoA carboxylase/reductase: the ethylmalonyl-CoA pathway
    • Erb, T.J., Berg, I.A., Brecht, V., Müller, M., Fuchs, G., Alber, B.E., Synthesis of C5-dicarboxylic acids from C2-units involving crotonyl-CoA carboxylase/reductase: the ethylmalonyl-CoA pathway. Proc. Natl. Acad. Sci. USA 104 (2007), 10631–10636.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 10631-10636
    • Erb, T.J.1    Berg, I.A.2    Brecht, V.3    Müller, M.4    Fuchs, G.5    Alber, B.E.6
  • 23
    • 80053227684 scopus 로고    scopus 로고
    • Alternative pathways of carbon dioxide fixation: insights into the early evolution of life?
    • Fuchs, G., Alternative pathways of carbon dioxide fixation: insights into the early evolution of life?. Annu. Rev. Microbiol. 65 (2011), 631–658.
    • (2011) Annu. Rev. Microbiol. , vol.65 , pp. 631-658
    • Fuchs, G.1
  • 25
    • 84946865957 scopus 로고    scopus 로고
    • Comparison of different sample preparation protocols reveals lysis buffer-specific extraction biases in gram-negative bacteria and human cells
    • Glatter, T., Ahrné E., Schmidt, A., Comparison of different sample preparation protocols reveals lysis buffer-specific extraction biases in gram-negative bacteria and human cells. J. Proteome Res. 14 (2015), 4472–4485.
    • (2015) J. Proteome Res. , vol.14 , pp. 4472-4485
    • Glatter, T.1    Ahrné, E.2    Schmidt, A.3
  • 27
    • 77956606402 scopus 로고    scopus 로고
    • Production of functionalized polyhydroxyalkanoates by genetically modified Methylobacterium extorquens strains
    • Hofer, P., Choi, Y.J., Osborne, M.J., Miguez, C.B., Vermette, P., Groleau, D., Production of functionalized polyhydroxyalkanoates by genetically modified Methylobacterium extorquens strains. Microb. Cell Fact., 9, 2010, 70.
    • (2010) Microb. Cell Fact. , vol.9 , pp. 70
    • Hofer, P.1    Choi, Y.J.2    Osborne, M.J.3    Miguez, C.B.4    Vermette, P.5    Groleau, D.6
  • 28
    • 84988872970 scopus 로고    scopus 로고
    • Metabolic engineering of Methylobacterium extorquens AM1 for 1-butanol production
    • Hu, B., Lidstrom, M.E., Metabolic engineering of Methylobacterium extorquens AM1 for 1-butanol production. Biotechnol. Biofuels, 7, 2014, 156.
    • (2014) Biotechnol. Biofuels , vol.7 , pp. 156
    • Hu, B.1    Lidstrom, M.E.2
  • 29
    • 0344518871 scopus 로고
    • Synthesis of spinach phosphoribulokinase and ribulose 1,5-bisphosphate in Escherichia coli
    • Hudson, G.S., Morell, M.K., Arvidsson, Y.B.C., Andrews, T.J., Synthesis of spinach phosphoribulokinase and ribulose 1,5-bisphosphate in Escherichia coli. Aust. J. Plant Physiol. 19 (1992), 213–221.
    • (1992) Aust. J. Plant Physiol. , vol.19 , pp. 213-221
    • Hudson, G.S.1    Morell, M.K.2    Arvidsson, Y.B.C.3    Andrews, T.J.4
  • 30
    • 0037312811 scopus 로고    scopus 로고
    • QscR, a LysR-type transcriptional regulator and CbbR homolog, is involved in regulation of the serine cycle genes in Methylobacterium extorquens AM1
    • Kalyuzhnaya, M.G., Lidstrom, M.E., QscR, a LysR-type transcriptional regulator and CbbR homolog, is involved in regulation of the serine cycle genes in Methylobacterium extorquens AM1. J. Bacteriol. 185 (2003), 1229–1235.
    • (2003) J. Bacteriol. , vol.185 , pp. 1229-1235
    • Kalyuzhnaya, M.G.1    Lidstrom, M.E.2
  • 31
    • 84875595569 scopus 로고    scopus 로고
    • eMZed: an open source framework in Python for rapid and interactive development of LC/MS data analysis workflows
    • Kiefer, P., Schmitt, U., Vorholt, J.A., eMZed: an open source framework in Python for rapid and interactive development of LC/MS data analysis workflows. Bioinformatics 29 (2013), 963–964.
    • (2013) Bioinformatics , vol.29 , pp. 963-964
    • Kiefer, P.1    Schmitt, U.2    Vorholt, J.A.3
  • 32
    • 0345382697 scopus 로고    scopus 로고
    • Molecular characterization and redox regulation of phosphoribulokinase from the cyanobacterium Synechococcus sp. PCC 7942
    • Kobayashi, D., Tamoi, M., Iwaki, T., Shigeoka, S., Wadano, A., Molecular characterization and redox regulation of phosphoribulokinase from the cyanobacterium Synechococcus sp. PCC 7942. Plant Cell Physiol. 44 (2003), 269–276.
    • (2003) Plant Cell Physiol. , vol.44 , pp. 269-276
    • Kobayashi, D.1    Tamoi, M.2    Iwaki, T.3    Shigeoka, S.4    Wadano, A.5
  • 33
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U.K., Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970), 680–685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 34
    • 0344990672 scopus 로고
    • Microbial growth on C1 compounds. 2. Synthesis of cell constituents by methanol- and formate-grown Pseudomonas AM 1, and methanol-grown Hyphomicrobium vulgare
    • Large, P.J., Peel, D., Quayle, J.R., Microbial growth on C1 compounds. 2. Synthesis of cell constituents by methanol- and formate-grown Pseudomonas AM 1, and methanol-grown Hyphomicrobium vulgare. Biochem. J. 81 (1961), 470–480.
    • (1961) Biochem. J. , vol.81 , pp. 470-480
    • Large, P.J.1    Peel, D.2    Quayle, J.R.3
  • 36
    • 58849089274 scopus 로고    scopus 로고
    • Development of a broad-host-range sacB-based vector for unmarked allelic exchange
    • Marx, C.J., Development of a broad-host-range sacB-based vector for unmarked allelic exchange. BMC Res. Notes, 1, 2008, 1.
    • (2008) BMC Res. Notes , vol.1 , pp. 1
    • Marx, C.J.1
  • 37
    • 0344235395 scopus 로고    scopus 로고
    • Purification of the formate-tetrahydrofolate ligase from Methylobacterium extorquens AM1 and demonstration of its requirement for methylotrophic growth
    • Marx, C.J., Laukel, M., Vorholt, J.A., Lidstrom, M.E., Purification of the formate-tetrahydrofolate ligase from Methylobacterium extorquens AM1 and demonstration of its requirement for methylotrophic growth. J. Bacteriol. 185 (2003), 7169–7175.
    • (2003) J. Bacteriol. , vol.185 , pp. 7169-7175
    • Marx, C.J.1    Laukel, M.2    Vorholt, J.A.3    Lidstrom, M.E.4
  • 38
    • 0034858690 scopus 로고    scopus 로고
    • Development of improved versatile broad-host-range vectors for use in methylotrophs and other gram-negative bacteria
    • Marx, C.J., Lidstrom, M.E., Development of improved versatile broad-host-range vectors for use in methylotrophs and other gram-negative bacteria. Microbiology 147 (2001), 2065–2075.
    • (2001) Microbiology , vol.147 , pp. 2065-2075
    • Marx, C.J.1    Lidstrom, M.E.2
  • 39
    • 0036841380 scopus 로고    scopus 로고
    • Broad-host-range cre-lox system for antibiotic marker recycling in gram-negative bacteria
    • Marx, C.J., Lidstrom, M.E., Broad-host-range cre-lox system for antibiotic marker recycling in gram-negative bacteria. BioTechniques 33 (2002), 1062–1067.
    • (2002) BioTechniques , vol.33 , pp. 1062-1067
    • Marx, C.J.1    Lidstrom, M.E.2
  • 40
    • 1642555532 scopus 로고    scopus 로고
    • Development of an insertional expression vector system for Methylobacterium extorquens AM1 and generation of null mutants lacking mtdA and/or fch
    • Marx, C.J., Lidstrom, M.E., Development of an insertional expression vector system for Methylobacterium extorquens AM1 and generation of null mutants lacking mtdA and/or fch. Microbiology 150 (2004), 9–19.
    • (2004) Microbiology , vol.150 , pp. 9-19
    • Marx, C.J.1    Lidstrom, M.E.2
  • 41
    • 84874798401 scopus 로고    scopus 로고
    • Expression of the sub-pathways of the Chloroflexus aurantiacus 3-hydroxypropionate carbon fixation bicycle in E. coli: Toward horizontal transfer of autotrophic growth
    • Mattozzi, M.D., Ziesack, M., Voges, M.J., Silver, P.A., Way, J.C., Expression of the sub-pathways of the Chloroflexus aurantiacus 3-hydroxypropionate carbon fixation bicycle in E. coli: Toward horizontal transfer of autotrophic growth. Metab. Eng. 16 (2013), 130–139.
    • (2013) Metab. Eng. , vol.16 , pp. 130-139
    • Mattozzi, M.D.1    Ziesack, M.2    Voges, M.J.3    Silver, P.A.4    Way, J.C.5
  • 42
    • 37049033685 scopus 로고    scopus 로고
    • Directed evolution of RuBisCO in Escherichia coli reveals a specificity-determining hydrogen bond in the form II enzyme
    • Mueller-Cajar, O., Morell, M., Whitney, S.M., Directed evolution of RuBisCO in Escherichia coli reveals a specificity-determining hydrogen bond in the form II enzyme. Biochemistry 46 (2007), 14067–14074.
    • (2007) Biochemistry , vol.46 , pp. 14067-14074
    • Mueller-Cajar, O.1    Morell, M.2    Whitney, S.M.3
  • 45
    • 85027505311 scopus 로고    scopus 로고
    • Transposon sequencing uncovers an essential regulatory function of phosphoribulokinase for methylotrophy
    • Ochsner, A.M., Christen, M., Hemmerle, L., Peyraud, R., Christen, B., Vorholt, J.A., Transposon sequencing uncovers an essential regulatory function of phosphoribulokinase for methylotrophy. Curr. Biol. 27 (2017), 2579–2588.
    • (2017) Curr. Biol. , vol.27 , pp. 2579-2588
    • Ochsner, A.M.1    Christen, M.2    Hemmerle, L.3    Peyraud, R.4    Christen, B.5    Vorholt, J.A.6
  • 47
    • 37349095608 scopus 로고    scopus 로고
    • Implementation of microarrays for Methylobacterium extorquens AM1
    • Okubo, Y., Skovran, E., Guo, X., Sivam, D., Lidstrom, M.E., Implementation of microarrays for Methylobacterium extorquens AM1. Omics 11 (2007), 325–340.
    • (2007) Omics , vol.11 , pp. 325-340
    • Okubo, Y.1    Skovran, E.2    Guo, X.3    Sivam, D.4    Lidstrom, M.E.5
  • 48
    • 84871971811 scopus 로고    scopus 로고
    • Towards oil independence through renewable methanol chemistry
    • Olah, G.A., Towards oil independence through renewable methanol chemistry. Angew. Chem. Int. Ed. 52 (2013), 104–107.
    • (2013) Angew. Chem. Int. Ed. , vol.52 , pp. 104-107
    • Olah, G.A.1
  • 49
    • 84898879030 scopus 로고    scopus 로고
    • Biosynthesis of polyhydroxyalkanoate copolymers from methanol by Methylobacterium extorquens AM1 and the engineered strains under cobalt-deficient conditions
    • Orita, I., Nishikawa, K., Nakamura, S., Fukui, T., Biosynthesis of polyhydroxyalkanoate copolymers from methanol by Methylobacterium extorquens AM1 and the engineered strains under cobalt-deficient conditions. Appl. Microbiol. Biotechnol. 98 (2014), 3715–3725.
    • (2014) Appl. Microbiol. Biotechnol. , vol.98 , pp. 3715-3725
    • Orita, I.1    Nishikawa, K.2    Nakamura, S.3    Fukui, T.4
  • 51
    • 0001031422 scopus 로고
    • Microbial growth on C1 compounds. 1. Isolation and characterization of Pseudomonas AM 1
    • Peel, D., Quayle, J.R., Microbial growth on C1 compounds. 1. Isolation and characterization of Pseudomonas AM 1. Biochem. J. 81 (1961), 465–469.
    • (1961) Biochem. J. , vol.81 , pp. 465-469
    • Peel, D.1    Quayle, J.R.2
  • 53
    • 80755159333 scopus 로고    scopus 로고
    • Genome-scale reconstruction and system level investigation of the metabolic network of Methylobacterium extorquens AM1
    • Peyraud, R., Schneider, K., Kiefer, P., Massou, S., Vorholt, J.A., Portais, J.C., Genome-scale reconstruction and system level investigation of the metabolic network of Methylobacterium extorquens AM1. BMC Syst. Biol., 5, 2011, 189.
    • (2011) BMC Syst. Biol. , vol.5 , pp. 189
    • Peyraud, R.1    Schneider, K.2    Kiefer, P.3    Massou, S.4    Vorholt, J.A.5    Portais, J.C.6
  • 54
    • 0001282803 scopus 로고
    • The reductive pentose phosphate cycle. I. Phosphoribulokinase and ribulose diphosphate carboxylase
    • Racker, E., The reductive pentose phosphate cycle. I. Phosphoribulokinase and ribulose diphosphate carboxylase. Arch. Biochem. Biophys. 69 (1957), 300–310.
    • (1957) Arch. Biochem. Biophys. , vol.69 , pp. 300-310
    • Racker, E.1
  • 55
    • 77956994339 scopus 로고
    • Ribulose diphosphate carboxylase from spinach leaves
    • Racker, E., Ribulose diphosphate carboxylase from spinach leaves. Method. Enzymol. 5 (1962), 266–270.
    • (1962) Method. Enzymol. , vol.5 , pp. 266-270
    • Racker, E.1
  • 56
    • 80051631238 scopus 로고    scopus 로고
    • GProX, a user-friendly platform for bioinformatics analysis and visualization of quantitative proteomics data
    • (O110.007450)
    • Rigbolt, K.T., Vanselow, J.T., Blagoev, B., GProX, a user-friendly platform for bioinformatics analysis and visualization of quantitative proteomics data. Mol. Cell. Proteom., 10, 2011 (O110.007450).
    • (2011) Mol. Cell. Proteom. , vol.10
    • Rigbolt, K.T.1    Vanselow, J.T.2    Blagoev, B.3
  • 57
    • 0004136246 scopus 로고    scopus 로고
    • Molecular Cloning: A Laboratory Manual
    • Cold Spring Harbor Laboratory Press Cold Spring Harbor, NY
    • Sambrook, J., Russell, D.W., Molecular Cloning: A Laboratory Manual. 2001, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (2001)
    • Sambrook, J.1    Russell, D.W.2
  • 58
    • 84928136409 scopus 로고    scopus 로고
    • A set of versatile brick vectors and promoters for the assembly, expression, and integration of synthetic operons in Methylobacterium extorquens AM1 and other Alphaproteobacteria
    • Schada von Borzyskowski, L., Remus-Emsermann, M., Weishaupt, R., Vorholt, J.A., Erb, T.J., A set of versatile brick vectors and promoters for the assembly, expression, and integration of synthetic operons in Methylobacterium extorquens AM1 and other Alphaproteobacteria. ACS Synth. Biol. 4 (2015), 430–443.
    • (2015) ACS Synth. Biol. , vol.4 , pp. 430-443
    • Schada von Borzyskowski, L.1    Remus-Emsermann, M.2    Weishaupt, R.3    Vorholt, J.A.4    Erb, T.J.5
  • 59
    • 0028289983 scopus 로고
    • Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum
    • Schäfer, A., Tauch, A., Jäger, W., Kalinowski, J., Thierbach, G., Pühler, A., Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicum. Gene 145 (1994), 69–73.
    • (1994) Gene , vol.145 , pp. 69-73
    • Schäfer, A.1    Tauch, A.2    Jäger, W.3    Kalinowski, J.4    Thierbach, G.5    Pühler, A.6
  • 60
    • 0018351889 scopus 로고
    • Isolation, characterization, and crystallization of ribulose bisphosphate carboxylase from autotrophically grown Rhodospirillum rubrum
    • Schloss, J.V., Phares, E.F., Long, M.V., Norton, I.L., Stringer, C.D., Hartman, F.C., Isolation, characterization, and crystallization of ribulose bisphosphate carboxylase from autotrophically grown Rhodospirillum rubrum. J. Bacteriol. 137 (1979), 490–501.
    • (1979) J. Bacteriol. , vol.137 , pp. 490-501
    • Schloss, J.V.1    Phares, E.F.2    Long, M.V.3    Norton, I.L.4    Stringer, C.D.5    Hartman, F.C.6
  • 61
    • 84855258472 scopus 로고    scopus 로고
    • The ethylmalonyl-CoA pathway is used in place of the glyoxylate cycle by Methylobacterium extorquens AM1 during growth on acetate
    • Schneider, K., Peyraud, R., Kiefer, P., Christen, P., Delmotte, N., Massou, S., Portais, J.C., Vorholt, J.A., The ethylmalonyl-CoA pathway is used in place of the glyoxylate cycle by Methylobacterium extorquens AM1 during growth on acetate. J. Biol. Chem. 287 (2012), 757–766.
    • (2012) J. Biol. Chem. , vol.287 , pp. 757-766
    • Schneider, K.1    Peyraud, R.2    Kiefer, P.3    Christen, P.4    Delmotte, N.5    Massou, S.6    Portais, J.C.7    Vorholt, J.A.8
  • 62
    • 58849109320 scopus 로고    scopus 로고
    • Methanol-based industrial biotechnology: current status and future perspectives of methylotrophic bacteria
    • Schrader, J., Schilling, M., Holtmann, D., Sell, D., Filho, M.V., Marx, A., Vorholt, J.A., Methanol-based industrial biotechnology: current status and future perspectives of methylotrophic bacteria. Trends Biotechnol. 27 (2009), 107–115.
    • (2009) Trends Biotechnol. , vol.27 , pp. 107-115
    • Schrader, J.1    Schilling, M.2    Holtmann, D.3    Sell, D.4    Filho, M.V.5    Marx, A.6    Vorholt, J.A.7
  • 64
    • 74549126675 scopus 로고    scopus 로고
    • An overview of second generation biofuel technologies
    • Sims, R.E., Mabee, W., Saddler, J.N., Taylor, M., An overview of second generation biofuel technologies. Bioresour. Technol. 101 (2010), 1570–1580.
    • (2010) Bioresour. Technol. , vol.101 , pp. 1570-1580
    • Sims, R.E.1    Mabee, W.2    Saddler, J.N.3    Taylor, M.4
  • 65
    • 84900823900 scopus 로고    scopus 로고
    • Thioesterases for ethylmalonyl-CoA pathway-derived dicarboxylic acid production in Methylobacterium extorquens AM1
    • Sonntag, F., Buchhaupt, M., Schrader, J., Thioesterases for ethylmalonyl-CoA pathway-derived dicarboxylic acid production in Methylobacterium extorquens AM1. Appl. Microbiol. Biotechnol. 98 (2014), 4533–4544.
    • (2014) Appl. Microbiol. Biotechnol. , vol.98 , pp. 4533-4544
    • Sonntag, F.1    Buchhaupt, M.2    Schrader, J.3
  • 66
    • 84943572735 scopus 로고    scopus 로고
    • Engineering Methylobacterium extorquens for de novo synthesis of the sesquiterpenoid alpha-humulene from methanol
    • Sonntag, F., Kroner, C., Lubuta, P., Peyraud, R., Horst, A., Buchhaupt, M., Schrader, J., Engineering Methylobacterium extorquens for de novo synthesis of the sesquiterpenoid alpha-humulene from methanol. Metab. Eng. 32 (2015), 82–94.
    • (2015) Metab. Eng. , vol.32 , pp. 82-94
    • Sonntag, F.1    Kroner, C.2    Lubuta, P.3    Peyraud, R.4    Horst, A.5    Buchhaupt, M.6    Schrader, J.7
  • 67
    • 84939963463 scopus 로고    scopus 로고
    • High-level production of ethylmalonyl-CoA pathway-derived dicarboxylic acids by Methylobacterium extorquens under cobalt-deficient conditions and by polyhydroxybutyrate negative strains
    • Sonntag, F., Müller, J.E.N., Kiefer, P., Vorholt, J.A., Schrader, J., Buchhaupt, M., High-level production of ethylmalonyl-CoA pathway-derived dicarboxylic acids by Methylobacterium extorquens under cobalt-deficient conditions and by polyhydroxybutyrate negative strains. Appl. Microbiol. Biotechnol. 99 (2015), 3407–3419.
    • (2015) Appl. Microbiol. Biotechnol. , vol.99 , pp. 3407-3419
    • Sonntag, F.1    Müller, J.E.N.2    Kiefer, P.3    Vorholt, J.A.4    Schrader, J.5    Buchhaupt, M.6
  • 68
    • 67650759672 scopus 로고    scopus 로고
    • Population heterogeneity in Methylobacterium extorquens AM1
    • Strovas, T.J., Lidstrom, M.E., Population heterogeneity in Methylobacterium extorquens AM1. Microbiology 155 (2009), 2040–2048.
    • (2009) Microbiology , vol.155 , pp. 2040-2048
    • Strovas, T.J.1    Lidstrom, M.E.2
  • 69
    • 34948874233 scopus 로고    scopus 로고
    • Cell-to-cell heterogeneity in growth rate and gene expression in Methylobacterium extorquens AM1
    • Strovas, T.J., Sauter, L.M., Guo, X., Lidstrom, M.E., Cell-to-cell heterogeneity in growth rate and gene expression in Methylobacterium extorquens AM1. J. Bacteriol. 189 (2007), 7127–7133.
    • (2007) J. Bacteriol. , vol.189 , pp. 7127-7133
    • Strovas, T.J.1    Sauter, L.M.2    Guo, X.3    Lidstrom, M.E.4
  • 70
    • 0031691347 scopus 로고    scopus 로고
    • Construction of insertion and deletion mxa mutants of Methylobacterium extorquens AM1 by electroporation
    • Toyama, H., Anthony, C., Lidstrom, M.E., Construction of insertion and deletion mxa mutants of Methylobacterium extorquens AM1 by electroporation. FEMS Microbiol. Lett. 166 (1998), 1–7.
    • (1998) FEMS Microbiol. Lett. , vol.166 , pp. 1-7
    • Toyama, H.1    Anthony, C.2    Lidstrom, M.E.3
  • 71
    • 84886685546 scopus 로고    scopus 로고
    • RuBisCO-based engineered Escherichia coli for in situ carbon dioxide recycling
    • Zhuang, Z.Y., Li, S.Y., RuBisCO-based engineered Escherichia coli for in situ carbon dioxide recycling. Bioresour. Technol. 150 (2013), 79–88.
    • (2013) Bioresour. Technol. , vol.150 , pp. 79-88
    • Zhuang, Z.Y.1    Li, S.Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.