-
1
-
-
79959700955
-
The first migrants to Madagascar and their introduction of plants: Linguistic and ethnological evidence
-
Beaujard, P. The first migrants to Madagascar and their introduction of plants: linguistic and ethnological evidence. Azania: Archaeol. Res. Afr. 46, 169-189 (2011).
-
(2011)
Azania: Archaeol. Res. Afr.
, vol.46
, pp. 169-189
-
-
Beaujard, P.1
-
2
-
-
84892949073
-
Genome-wide evidence of Austronesian-Bantu admixture and cultural reversion in a hunter-gatherer group of Madagascar
-
Pierron, D. et al. Genome-wide evidence of Austronesian-Bantu admixture and cultural reversion in a hunter-gatherer group of Madagascar. Proc. Natl Acad. Sci. USA 111, 936-941 (2014).
-
(2014)
Proc. Natl Acad. Sci. USA
, vol.111
, pp. 936-941
-
-
Pierron, D.1
-
4
-
-
85026861452
-
Genomic landscape of human diversity across Madagascar
-
Pierron, D. et al Genomic landscape of human diversity across Madagascar. Proc. Natl Acad. Sci. USA 114, E6498-E6506 (2017).
-
(2017)
Proc. Natl Acad. Sci. USA
, vol.114
, pp. E6498-E6506
-
-
Pierron, D.1
-
6
-
-
84974784747
-
Ancient crops provide first archaeological signature of the westward Austronesian expansion
-
Crowther, A. et al. Ancient crops provide first archaeological signature of the westward Austronesian expansion. Proc. Natl Acad. Sci. USA 113, 6635-6640 (2016).
-
(2016)
Proc. Natl Acad. Sci. USA
, vol.113
, pp. 6635-6640
-
-
Crowther, A.1
-
7
-
-
84921811405
-
Genome-wide scan of 29,141 African Americans finds no evidence of directional selection since admixture
-
Bhatia, G. et al. Genome-wide scan of 29,141 African Americans finds no evidence of directional selection since admixture. Am. J. Hum. Genet. 95, 437-444 (2014).
-
(2014)
Am. J. Hum. Genet.
, vol.95
, pp. 437-444
-
-
Bhatia, G.1
-
8
-
-
84959925806
-
Strong selection at MHC in Mexicans since admixture
-
Zhou, Q., Zhao, L. & Guan, Y. Strong Selection at MHC in Mexicans since Admixture. PLoS Genet. 12, e1005847 (2016).
-
(2016)
PLoS Genet.
, vol.12
, pp. e1005847
-
-
Zhou, Q.1
Zhao, L.2
Guan, Y.3
-
9
-
-
84863265109
-
Genome-wide detection of natural selection in African Americans pre-and post-admixture
-
Jin, W. et al. Genome-wide detection of natural selection in African Americans pre-and post-admixture. Genome Res. 22, 519-527 (2012).
-
(2012)
Genome Res.
, vol.22
, pp. 519-527
-
-
Jin, W.1
-
10
-
-
84903715029
-
Admixture facilitates genetic adaptations to high altitude in Tibet
-
Jeong, C. et al. Admixture facilitates genetic adaptations to high altitude in Tibet. Nat. Commun. 5, 3281 (2014).
-
(2014)
Nat. Commun.
, vol.5
, pp. 3281
-
-
Jeong, C.1
-
11
-
-
84954244556
-
Introgression of Neandertal-and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Tolllike Receptors
-
Dannemann, M., Andres, A. M. & Kelso, J. Introgression of Neandertal-and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Tolllike Receptors. Am. J. Hum. Genet. 98, 22-33 (2016).
-
(2016)
Am. J. Hum. Genet.
, vol.98
, pp. 22-33
-
-
Dannemann, M.1
Andres, A.M.2
Kelso, J.3
-
12
-
-
84958741842
-
Wide distribution and altitude correlation of an archaic high-altitude-adaptive EPAS1 haplotype in the Himalayas
-
Hackinger, S. et al. Wide distribution and altitude correlation of an archaic high-altitude-adaptive EPAS1 haplotype in the Himalayas. Hum. Genet. 135, 393-402 (2016).
-
(2016)
Hum. Genet.
, vol.135
, pp. 393-402
-
-
Hackinger, S.1
-
13
-
-
84979937476
-
The genetic cost of Neanderthal introgression
-
Harris, K. & Nielsen, R. The genetic cost of Neanderthal introgression. Genetics 203, 881-891 (2016).
-
(2016)
Genetics
, vol.203
, pp. 881-891
-
-
Harris, K.1
Nielsen, R.2
-
14
-
-
84905572361
-
Inferring human population size and separation history from multiple genome sequences
-
Schiffels, S. & Durbin, R. Inferring human population size and separation history from multiple genome sequences. Nat. Genet. 46, 919-925 (2014).
-
(2014)
Nat. Genet.
, vol.46
, pp. 919-925
-
-
Schiffels, S.1
Durbin, R.2
-
15
-
-
84903715719
-
Natural selection for the Duffy-null allele in the recently admixed people of Madagascar
-
Hodgson, J. A. et al. Natural selection for the Duffy-null allele in the recently admixed people of Madagascar. Proc. Biol. Sci. 281, 20140930 (2014).
-
(2014)
Proc. Biol. Sci.
, vol.281
, pp. 20140930
-
-
Hodgson, J.A.1
-
16
-
-
77950533196
-
Plasmodium vivax clinical malaria is commonly observed in Duffy-negative Malagasy people
-
Menard, D. et al. Plasmodium vivax clinical malaria is commonly observed in Duffy-negative Malagasy people. Proc. Natl Acad. Sci. USA 107, 5967-5971 (2010).
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 5967-5971
-
-
Menard, D.1
-
17
-
-
85016648869
-
Population genetic analysis of the DARC locus (Duffy) reveals adaptation from standing variation associated with malaria resistance in humans
-
McManus, K. F. et al. Population genetic analysis of the DARC locus (Duffy) reveals adaptation from standing variation associated with malaria resistance in humans. PLoS Genet. 13, e1006560 (2017).
-
(2017)
PLoS Genet.
, vol.13
, pp. e1006560
-
-
McManus, K.F.1
-
18
-
-
84876362318
-
Inferring admixture histories of human populations using linkage disequilibrium
-
Loh, P. R. et al. Inferring admixture histories of human populations using linkage disequilibrium. Genetics 193, 1233-1254 (2013).
-
(2013)
Genetics
, vol.193
, pp. 1233-1254
-
-
Loh, P.R.1
-
19
-
-
84893945338
-
A genetic atlas of human admixture history
-
Hellenthal, G. et al. A genetic atlas of human admixture history. Science 343, 747-751 (2014).
-
(2014)
Science
, vol.343
, pp. 747-751
-
-
Hellenthal, G.1
-
20
-
-
84941025723
-
Accurate non-parametric estimation of recent effective population size from segments of identity by descent
-
Browning, S. R. & Browning, B. L. Accurate non-parametric estimation of recent effective population size from segments of identity by descent. Am. J. Hum. Genet. 97, 404-418 (2015).
-
(2015)
Am. J. Hum. Genet.
, vol.97
, pp. 404-418
-
-
Browning, S.R.1
Browning, B.L.2
-
22
-
-
84943171338
-
A global reference for human genetic variation
-
Genomes Project, C. et al. A global reference for human genetic variation. Nature 526, 68-74 (2015).
-
(2015)
Nature
, vol.526
, pp. 68-74
-
-
Genomes Project, C.1
-
23
-
-
84890802026
-
Phenotype-Genotype Integrator (PheGenI): Synthesizing genome-wide association study (GWAS) data with existing genomic resources
-
Ramos, E. M. et al. Phenotype-Genotype Integrator (PheGenI): synthesizing genome-wide association study (GWAS) data with existing genomic resources. Eur. J. Hum. Genet. 22, 144-147 (2014).
-
(2014)
Eur. J. Hum. Genet.
, vol.22
, pp. 144-147
-
-
Ramos, E.M.1
-
24
-
-
0036157464
-
Complex signatures of natural selection at the Duffy blood group locus
-
Hamblin, M. T., Thompson, E. E. & Di Rienzo, A. Complex signatures of natural selection at the Duffy blood group locus. Am. J. Hum. Genet. 70, 369-383 (2002).
-
(2002)
Am. J. Hum. Genet.
, vol.70
, pp. 369-383
-
-
Hamblin, M.T.1
Thompson, E.E.2
Di Rienzo, A.3
-
25
-
-
79953794193
-
The global distribution of the Duffy blood group
-
Howes, R. E. et al. The global distribution of the Duffy blood group. Nat. Commun. 2, 266 (2011).
-
(2011)
Nat. Commun.
, vol.2
, pp. 266
-
-
Howes, R.E.1
-
26
-
-
84949427381
-
Plasmodium vivax transmission in Africa
-
Howes, R. E. et al. Plasmodium vivax transmission in Africa. PLoS Negl. Trop. Dis. 9, e0004222 (2015).
-
(2015)
PLoS Negl. Trop. Dis.
, vol.9
, pp. e0004222
-
-
Howes, R.E.1
-
27
-
-
57049090692
-
The fight against malaria in Madagascar
-
Joncour, G. [The fight against malaria in Madagascar]. Bull. World Health Organ. 15, 711-723 (1956).
-
(1956)
Bull. World Health Organ.
, vol.15
, pp. 711-723
-
-
Joncour, G.1
-
28
-
-
84866070927
-
Genome-wide association and population genetic analysis of C-reactive protein in African American and Hispanic American women
-
Reiner, A. P. et al. Genome-wide association and population genetic analysis of C-reactive protein in African American and Hispanic American women. Am. J. Hum. Genet. 91, 502-512 (2012).
-
(2012)
Am. J. Hum. Genet.
, vol.91
, pp. 502-512
-
-
Reiner, A.P.1
-
29
-
-
84876419289
-
African ancestry is a risk factor for asthma and high total IgE levels in African admixed populations
-
Vergara, C. et al. African ancestry is a risk factor for asthma and high total IgE levels in African admixed populations. Genet. Epidemiol. 37, 393-401 (2013).
-
(2013)
Genet. Epidemiol.
, vol.37
, pp. 393-401
-
-
Vergara, C.1
-
30
-
-
59249102648
-
Reduced neutrophil count in people of African descent is due to a regulatory variant in the Duffy antigen receptor for chemokines gene
-
Reich, D. et al. Reduced neutrophil count in people of African descent is due to a regulatory variant in the Duffy antigen receptor for chemokines gene. PLoS Genet. 5, e1000360 (2009).
-
(2009)
PLoS Genet.
, vol.5
, pp. e1000360
-
-
Reich, D.1
-
31
-
-
2442677652
-
Genetic signatures of strong recent positive selection at the lactase gene
-
Bersaglieri, T. et al. Genetic signatures of strong recent positive selection at the lactase gene. Am. J. Hum. Genet. 74, 1111-1120 (2004).
-
(2004)
Am. J. Hum. Genet.
, vol.74
, pp. 1111-1120
-
-
Bersaglieri, T.1
-
32
-
-
84928262274
-
African origin of the malaria parasite Plasmodium vivax
-
Liu, W. et al. African origin of the malaria parasite Plasmodium vivax. Nat. Commun. 5, 3346 (2014).
-
(2014)
Nat. Commun.
, vol.5
, pp. 3346
-
-
Liu, W.1
-
33
-
-
84934767035
-
Plasmodium vivax diversity and population structure across four continents
-
Koepfli, C. et al. Plasmodium vivax diversity and population structure across four continents. PLoS Negl. Trop. Dis. 9, e0003872 (2015).
-
(2015)
PLoS Negl. Trop. Dis.
, vol.9
, pp. e0003872
-
-
Koepfli, C.1
-
34
-
-
83355170725
-
The origins of African Plasmodium vivax; Insights from mitochondrial genome sequencing
-
Culleton, R. et al. The origins of African Plasmodium vivax; insights from mitochondrial genome sequencing. PLoS ONE 6, e29137 (2011).
-
(2011)
PLoS ONE
, vol.6
, pp. e29137
-
-
Culleton, R.1
-
35
-
-
85014597511
-
Global epidemiology of Plasmodium vivax
-
Howes, R. E. et al. Global epidemiology of Plasmodium vivax. Am. J. Trop. Med. Hyg. 95, 15-34 (2016).
-
(2016)
Am. J. Trop. Med. Hyg.
, vol.95
, pp. 15-34
-
-
Howes, R.E.1
-
36
-
-
1642588230
-
A large focus of naturally acquired Plasmodium knowlesi infections in human beings
-
Singh, B. et al. A large focus of naturally acquired Plasmodium knowlesi infections in human beings. Lancet 363, 1017-1024 (2004).
-
(2004)
Lancet
, vol.363
, pp. 1017-1024
-
-
Singh, B.1
-
37
-
-
84895557466
-
Helminth allergens, parasite-specific IgE, and its protective role in human immunity
-
Fitzsimmons, C. M., Falcone, F. H. & Dunne, D. W. Helminth allergens, parasite-specific IgE, and its protective role in human immunity. Front. Immunol. 5, 61 (2014).
-
(2014)
Front. Immunol.
, vol.5
, pp. 61
-
-
Fitzsimmons, C.M.1
Falcone, F.H.2
Dunne, D.W.3
-
38
-
-
84880938685
-
Different FCER1A polymorphisms influence IgE levels in asthmatics and non-asthmatics
-
Potaczek, D. P. et al. Different FCER1A polymorphisms influence IgE levels in asthmatics and non-asthmatics. Pediatr. Allergy Immunol. 24, 441-449 (2013).
-
(2013)
Pediatr. Allergy Immunol.
, vol.24
, pp. 441-449
-
-
Potaczek, D.P.1
-
39
-
-
40349085514
-
Geohelminth infections: A review of the role of IgE and assessment of potential risks of anti-IgE treatment
-
Cooper, P. J. et al. Geohelminth infections: A review of the role of IgE and assessment of potential risks of anti-IgE treatment. Allergy 63, 409-417 (2008).
-
(2008)
Allergy
, vol.63
, pp. 409-417
-
-
Cooper, P.J.1
-
40
-
-
0034456001
-
Estimation of normal hemogram values in Madagascar
-
Rakoto Alson, O., Ratsitorahina, M., Pfister, P., Laganier, R. & Dromigny, J. A. [Estimation of normal hemogram values in Madagascar]. Arch. Inst. Pasteur Madag. 66, 68-71 (2000).
-
(2000)
Arch. Inst. Pasteur Madag.
, vol.66
, pp. 68-71
-
-
Rakoto Alson, O.1
Ratsitorahina, M.2
Pfister, P.3
Laganier, R.4
Dromigny, J.A.5
-
41
-
-
84930213392
-
Second-generation PLINK: Rising to the challenge of larger and richer datasets
-
Chang, C. C. et al. Second-generation PLINK: rising to the challenge of larger and richer datasets. Gigascience 4, 7 (2015).
-
(2015)
Gigascience
, vol.4
, pp. 7
-
-
Chang, C.C.1
-
42
-
-
84901335340
-
Detecting structure of haplotypes and local ancestry
-
Guan, Y. Detecting structure of haplotypes and local ancestry. Genetics 196, 625-642 (2014).
-
(2014)
Genetics
, vol.196
, pp. 625-642
-
-
Guan, Y.1
-
43
-
-
84881665614
-
RFMix: A discriminative modeling approach for rapid and robust local-ancestry inference
-
Maples, B. K., Gravel, S., Kenny, E. E. & Bustamante, C. D. RFMix: A discriminative modeling approach for rapid and robust local-ancestry inference. Am. J. Hum. Genet. 93, 278-288 (2013).
-
(2013)
Am. J. Hum. Genet.
, vol.93
, pp. 278-288
-
-
Maples, B.K.1
Gravel, S.2
Kenny, E.E.3
Bustamante, C.D.4
-
44
-
-
35348817330
-
Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering
-
Browning, S. R. & Browning, B. L. Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering. Am. J. Hum. Genet. 81, 1084-1097 (2007).
-
(2007)
Am. J. Hum. Genet.
, vol.81
, pp. 1084-1097
-
-
Browning, S.R.1
Browning, B.L.2
-
45
-
-
84856478855
-
A linear complexity phasing method for thousands of genomes
-
Delaneau, O., Marchini, J. & Zagury, J. F. A linear complexity phasing method for thousands of genomes. Nat. Methods 9, 179-181 (2012).
-
(2012)
Nat. Methods
, vol.9
, pp. 179-181
-
-
Delaneau, O.1
Marchini, J.2
Zagury, J.F.3
-
46
-
-
84872074517
-
PCAdmix: Principal components-based assignment of ancestry along each chromosome in individuals with admixed ancestry from two or more populations
-
Brisbin, A. et al. PCAdmix: principal components-based assignment of ancestry along each chromosome in individuals with admixed ancestry from two or more populations. Hum. Biol. 84, 343-364 (2012).
-
(2012)
Hum. Biol.
, vol.84
, pp. 343-364
-
-
Brisbin, A.1
-
47
-
-
69749099417
-
Fast model-based estimation of ancestry in unrelated individuals
-
Alexander, D. H., Novembre, J. & Lange, K. Fast model-based estimation of ancestry in unrelated individuals. Genome Res. 19, 1655-1664 (2009).
-
(2009)
Genome Res.
, vol.19
, pp. 1655-1664
-
-
Alexander, D.H.1
Novembre, J.2
Lange, K.3
-
49
-
-
79960405019
-
The variant call format and VCFtools
-
Danecek, P. et al. The variant call format and VCFtools. Bioinformatics 27, 2156-2158 (2011).
-
(2011)
Bioinformatics
, vol.27
, pp. 2156-2158
-
-
Danecek, P.1
|