메뉴 건너뛰기




Volumn 109, Issue 2, 2017, Pages 200-209

Study of the genetic diversity of the aflatoxin biosynthesis cluster in aspergillus section flavi using insertion/deletion markers in peanut seeds from Georgia, USA

Author keywords

Arachis hypogaea; Capillary electrophoresis; Cluster analysis; Genome sequencing; Insertion deletion; Mycotoxin

Indexed keywords

ELECTROKINESIS; FUNGUS; GENE; GENE EXPRESSION; GENETIC ANALYSIS; GENETIC MARKER; GENETIC VARIATION; GENOME; LEGUME; SEED; TOXIN;

EID: 85032260704     PISSN: 00275514     EISSN: 15572536     Source Type: Journal    
DOI: 10.1080/00275514.2017.1307095     Document Type: Article
Times cited : (14)

References (57)
  • 1
    • 84952815313 scopus 로고    scopus 로고
    • RNAi-mediated control of aflatoxins in peanut: Method to analyze mycotoxin production and transgene expression in the peanut/Aspergillus pathosystem
    • Arias RS, Dang PM, Sobolev VS. 2015. RNAi-mediated control of aflatoxins in peanut: method to analyze mycotoxin production and transgene expression in the peanut/Aspergillus pathosystem. Journal of Visualized Experiments 106:e53398.
    • (2015) Journal of Visualized Experiments , vol.106
    • Arias, R.S.1    Dang, P.M.2    Sobolev, V.S.3
  • 4
    • 0003111604 scopus 로고
    • Genetic diversity in Aspergillus flavus: Association with aflatoxin production and morphology
    • Bayman P, Cotty PJ. 1993. Genetic diversity in Aspergillus flavus: association with aflatoxin production and morphology. Canadian Journal of Botany 71:23-31.
    • (1993) Canadian Journal of Botany , vol.71 , pp. 23-31
    • Bayman, P.1    Cotty, P.J.2
  • 5
    • 0001506104 scopus 로고    scopus 로고
    • Modulation of non-templated nucleotide addition by TaqDNA polymerase: Primer modifications that facilitate genotyping
    • Brownstein MJ, Carpten JD, Smith JR. 1996. Modulation of non-templated nucleotide addition by TaqDNA polymerase: primer modifications that facilitate genotyping. BioTechniques 20:1004-1010.
    • (1996) BioTechniques , vol.20 , pp. 1004-1010
    • Brownstein, M.J.1    Carpten, J.D.2    Smith, J.R.3
  • 7
    • 84916242214 scopus 로고    scopus 로고
    • Method for monitoring deletions in the aflatoxin biosynthesis gene cluster of Aspergillus flavus with multiplex PCR
    • Callicott KA, Cotty PJ. 2015. Method for monitoring deletions in the aflatoxin biosynthesis gene cluster of Aspergillus flavus with multiplex PCR. Letters in Applied Microbiology 60:60-65.
    • (2015) Letters in Applied Microbiology , vol.60 , pp. 60-65
    • Callicott, K.A.1    Cotty, P.J.2
  • 9
    • 34547995522 scopus 로고    scopus 로고
    • Recombination, balancing selection and adaptive evolution in the aflatoxin gene cluster of Aspergillus parasiticus
    • Carbone I, Jakobek JL, Ramirez-Prado JH, Horn BW. 2007. Recombination, balancing selection and adaptive evolution in the aflatoxin gene cluster of Aspergillus parasiticus. Molecular Ecology 16:4401-4417.
    • (2007) Molecular Ecology , vol.16 , pp. 4401-4417
    • Carbone, I.1    Jakobek, J.L.2    Ramirez-Prado, J.H.3    Horn, B.W.4
  • 10
    • 84857060133 scopus 로고    scopus 로고
    • Identification of genetic defects in the atoxigenic biocontrol strain Aspergillus flavus K49 reveals the presence of a competitive recombinant group in field populations
    • Chang PK, Abbas HK, Weaver MA, Ehrlich KC, Scharfenstein LL, Cotty PJ. 2012. Identification of genetic defects in the atoxigenic biocontrol strain Aspergillus flavus K49 reveals the presence of a competitive recombinant group in field populations. International Journal of Food Microbiology 154:192-196.
    • (2012) International Journal of Food Microbiology , vol.154 , pp. 192-196
    • Chang, P.K.1    Abbas, H.K.2    Weaver, M.A.3    Ehrlich, K.C.4    Scharfenstein, L.L.5    Cotty, P.J.6
  • 11
    • 27544501673 scopus 로고    scopus 로고
    • Sequence breakpoints in the aflatoxin biosynthesis gene cluster and flanking regions in nonaflatoxigenic Aspergillus flavus isolates
    • Chang PK, Horn BW, Dorner JW. 2005. Sequence breakpoints in the aflatoxin biosynthesis gene cluster and flanking regions in nonaflatoxigenic Aspergillus flavus isolates. Fungal Genetics and Biology 42:914-923.
    • (2005) Fungal Genetics and Biology , vol.42 , pp. 914-923
    • Chang, P.K.1    Horn, B.W.2    Dorner, J.W.3
  • 12
    • 84882759440 scopus 로고    scopus 로고
    • Structure Harvester: A website and program for visualizing Structure output and implementing the Evanno method
    • Earl DA, vonHoldt BM. 2011. Structure Harvester: a website and program for visualizing Structure output and implementing the Evanno method. Conservation Genetics Resources 4:359-361.
    • (2011) Conservation Genetics Resources , vol.4 , pp. 359-361
    • Earl, D.A.1    vonHoldt, B.M.2
  • 14
    • 4644368810 scopus 로고    scopus 로고
    • An isolate of Aspergillus flavus used to reduce aflatoxin contamination in cottonseed has a defective polyketide synthase gene
    • Ehrlich KC, Cotty PJ. 2004. An isolate of Aspergillus flavus used to reduce aflatoxin contamination in cottonseed has a defective polyketide synthase gene. Applied Microbiology and Biotechnology 65:473-478.
    • (2004) Applied Microbiology and Biotechnology , vol.65 , pp. 473-478
    • Ehrlich, K.C.1    Cotty, P.J.2
  • 15
    • 0037331126 scopus 로고    scopus 로고
    • Sequence comparison of aflR from different Aspergillus species provides evidence for variability in regulation of aflatoxin production
    • Ehrlich KC, Montalbano BG, Cotty PJ. 2003. Sequence comparison of aflR from different Aspergillus species provides evidence for variability in regulation of aflatoxin production. Fungal Genetics and Biology 38:63-74.
    • (2003) Fungal Genetics and Biology , vol.38 , pp. 63-74
    • Ehrlich, K.C.1    Montalbano, B.G.2    Cotty, P.J.3
  • 18
    • 0035803583 scopus 로고    scopus 로고
    • Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate
    • Elbashir SM, Martinez J, Patkaniowska A, Lendeckel W, Tuschl T. 2001. Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. The EMBO Journal 20:6877-6888.
    • (2001) The EMBO Journal , vol.20 , pp. 6877-6888
    • Elbashir, S.M.1    Martinez, J.2    Patkaniowska, A.3    Lendeckel, W.4    Tuschl, T.5
  • 19
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • Evanno G, Regnaut S, Goudet J. 2005. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology 14:2611-2620.
    • (2005) Molecular Ecology , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 20
    • 85009986101 scopus 로고    scopus 로고
    • Genome sequences of eight Aspergillus flavus spp. and one A. parasiticus sp., isolated from peanut seeds in Georgia
    • Faustinelli PC, Wang XM, Palencia ER, Arias RS. 2016. Genome sequences of eight Aspergillus flavus spp. and one A. parasiticus sp., isolated from peanut seeds in Georgia. Genome Announcements 4:e00278-16.
    • (2016) Genome Announcements , vol.4
    • Faustinelli, P.C.1    Wang, X.M.2    Palencia, E.R.3    Arias, R.S.4
  • 21
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 23
    • 0030839254 scopus 로고    scopus 로고
    • Aspergillus sporulation and mycotoxin production both require inactivation of the FadA Gα protein-dependent signaling pathway
    • Hicks JK, Yu J-H, Keller NP, Adams TH. 1997. Aspergillus sporulation and mycotoxin production both require inactivation of the FadA Gα protein-dependent signaling pathway. The EMBO Journal 16:4976-4923.
    • (1997) The EMBO Journal , vol.16
    • Hicks, J.K.1    Yu, J.-H.2    Keller, N.P.3    Adams, T.H.4
  • 24
    • 34748847424 scopus 로고    scopus 로고
    • Biodiversity of Aspergillus section Flavi in the United States: A review
    • Horn BW. 2007. Biodiversity of Aspergillus section Flavi in the United States: a review. Food Additives & Contamination 24:1088-1101.
    • (2007) Food Additives & Contamination , vol.24 , pp. 1088-1101
    • Horn, B.W.1
  • 25
    • 0031782905 scopus 로고    scopus 로고
    • Soil populations of Aspergillus species from section Flavi along a transect through peanutgrowing regions of the United States
    • Horn BW, Dorner JW. 1998. Soil populations of Aspergillus species from section Flavi along a transect through peanutgrowing regions of the United States. Mycologia 90:767-776.
    • (1998) Mycologia , vol.90 , pp. 767-776
    • Horn, B.W.1    Dorner, J.W.2
  • 26
    • 0032914429 scopus 로고    scopus 로고
    • Regional differences in production of aflatoxin B1 and cyclopiazonic acid by soil isolates of Aspergillus flavus along a transect within the United States
    • Horn BW, Dorner JW. 1999. Regional differences in production of aflatoxin B1 and cyclopiazonic acid by soil isolates of Aspergillus flavus along a transect within the United States. Applied Environmental Microbiology 65:1444-1449.
    • (1999) Applied Environmental Microbiology , vol.65 , pp. 1444-1449
    • Horn, B.W.1    Dorner, J.W.2
  • 27
    • 67650221600 scopus 로고    scopus 로고
    • Sexual reproduction in Aspergillus flavus
    • Horn BW, Moore GG, Carbone I. 2009a. Sexual reproduction in Aspergillus flavus. Mycologia 101:423-429.
    • (2009) Mycologia , vol.101 , pp. 423-429
    • Horn, B.W.1    Moore, G.G.2    Carbone, I.3
  • 28
    • 65549129123 scopus 로고    scopus 로고
    • The sexual state of Aspergillus parasiticus
    • Horn BW, Ramirez-Prado JH, Carbone I. 2009b. The sexual state of Aspergillus parasiticus. Mycologia 101:275-280.
    • (2009) Mycologia , vol.101 , pp. 275-280
    • Horn, B.W.1    Ramirez-Prado, J.H.2    Carbone, I.3
  • 31
    • 0012814267 scopus 로고    scopus 로고
    • Cost of aflatoxin to the farmer, buying point, and sheller segments of the Southeast United States peanut industry
    • Lamb MC, Sternitzke DA. 2001. Cost of aflatoxin to the farmer, buying point, and sheller segments of the Southeast United States peanut industry. Peanut Science 28:59-63.
    • (2001) Peanut Science , vol.28 , pp. 59-63
    • Lamb, M.C.1    Sternitzke, D.A.2
  • 32
    • 33747666217 scopus 로고    scopus 로고
    • Aspergillus oryzae strains with a large deletion of the aflatoxin biosynthetic homologous gene cluster differentiated by chromosomal breakage
    • Lee YH, Tominaga M, Hayashi R, Sakamoto K, Yamada O, Akita O. 2006. Aspergillus oryzae strains with a large deletion of the aflatoxin biosynthetic homologous gene cluster differentiated by chromosomal breakage. Applied Microbiology and Biotechnology 72:339-345.
    • (2006) Applied Microbiology and Biotechnology , vol.72 , pp. 339-345
    • Lee, Y.H.1    Tominaga, M.2    Hayashi, R.3    Sakamoto, K.4    Yamada, O.5    Akita, O.6
  • 34
    • 84878229900 scopus 로고    scopus 로고
    • Multi-mycotoxin analysis of finished grain and nut products using high-performance liquid chromatography-triple-quadrupole mass spectrometry
    • Liao CD, Wong JW, Zhang K, Hayward DG, Lee NS, Trucksess MW. 2013. Multi-mycotoxin analysis of finished grain and nut products using high-performance liquid chromatography-triple-quadrupole mass spectrometry. Journal of Agriculture and Food Chemistry 61:4771-4782.
    • (2013) Journal of Agriculture and Food Chemistry , vol.61 , pp. 4771-4782
    • Liao, C.D.1    Wong, J.W.2    Zhang, K.3    Hayward, D.G.4    Lee, N.S.5    Trucksess, M.W.6
  • 36
    • 70449728010 scopus 로고    scopus 로고
    • Recombination and lineage-specific gene loss in the aflatoxin gene cluster of Aspergillus flavus
    • Moore GG, Singh R, Horn BW, Carbone I. 2009. Recombination and lineage-specific gene loss in the aflatoxin gene cluster of Aspergillus flavus. Molecular Ecology 18:4870-4887.
    • (2009) Molecular Ecology , vol.18 , pp. 4870-4887
    • Moore, G.G.1    Singh, R.2    Horn, B.W.3    Carbone, I.4
  • 42
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus Genotype Data
    • Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus Genotype Data. Genetics 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 46
    • 84924702578 scopus 로고    scopus 로고
    • Rapid and inexpensive whole-genome genotyping-by-sequencing for crossover localization and fine-scale genetic mapping
    • Rowan BA, Patel V, Weigel D, Schneeberger K. 2015. Rapid and inexpensive whole-genome genotyping-by-sequencing for crossover localization and fine-scale genetic mapping. G3 Journal 5:385-398.
    • (2015) G3 Journal , vol.5 , pp. 385-398
    • Rowan, B.A.1    Patel, V.2    Weigel, D.3    Schneeberger, K.4
  • 47
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4:406-425.
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 48
    • 0036562130 scopus 로고    scopus 로고
    • Cleanup procedure for determination of aflatoxins in major agricultural commodities by liquid chromatography
    • Sobolev VS, Dorner JW. 2002. Cleanup procedure for determination of aflatoxins in major agricultural commodities by liquid chromatography. Journal of AOAC International 85:642-645.
    • (2002) Journal of AOAC International , vol.85 , pp. 642-645
    • Sobolev, V.S.1    Dorner, J.W.2
  • 51
    • 77950373297 scopus 로고    scopus 로고
    • In vivo trans-specific gene silencing in fungal cells by in planta expression of a double-stranded RNA
    • Tinoco MLP, Dias BB, Dall’Astta RC, Pamphile JA, Aragão FJ. 2010. In vivo trans-specific gene silencing in fungal cells by in planta expression of a double-stranded RNA. BMC Biology 8:27.
    • (2010) BMC Biology , vol.8 , pp. 27
    • Tinoco, M.L.P.1    Dias, B.B.2    Dall’Astta, R.C.3    Pamphile, J.A.4    Aragão, F.J.5
  • 52
    • 0242695033 scopus 로고    scopus 로고
    • Rapid development of gene-tagged microsatellite markers from bacterial artificial chromosome clones using anchored TAA repeat primers
    • Waldbieser GC, Quiniou SMA, Karsi A. 2003. Rapid development of gene-tagged microsatellite markers from bacterial artificial chromosome clones using anchored TAA repeat primers. BioTechniques 35:976-979.
    • (2003) BioTechniques , vol.35 , pp. 976-979
    • Waldbieser, G.C.1    Quiniou, S.M.A.2    Karsi, A.3
  • 56
    • 79953761657 scopus 로고    scopus 로고
    • Development of a Host-Induced RNAi System in the Wheat Stripe Rust Fungus Puccinia striiformis f. sp. tritici
    • Yin Ch, Jurgenson JE, Hulbert SH. 2011. Development of a Host-Induced RNAi System in the Wheat Stripe Rust Fungus Puccinia striiformis f. sp. tritici. Molecular Plant-Microbe Interactions 24:554-561.
    • (2011) Molecular Plant-Microbe Interactions , vol.24 , pp. 554-561
    • Ch, Y.1    Jurgenson, J.E.2    Hulbert, S.H.3
  • 57
    • 84870529846 scopus 로고    scopus 로고
    • Current understanding on aflatoxin biosynthesis and future perspective in reducing aflatoxin contamination
    • Yu J. 2012. Current understanding on aflatoxin biosynthesis and future perspective in reducing aflatoxin contamination. Toxins 4:1024-1057.
    • (2012) Toxins , vol.4 , pp. 1024-1057
    • Yu, J.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.