-
1
-
-
84931561466
-
Dendritic cells and monocyte-derived cells: Two complementary and integrated functional systems
-
pmid : 25957517
-
A. Schlitzer, N. McGovern, F. Ginhoux, Dendritic cells and monocyte-derived cells: Two complementary and integrated functional systems. Semin. Cell Dev. Biol. 41, 9-22 (2015). doi: 10.1016/j.semcdb.2015.03.011; pmid: 25957517
-
(2015)
Semin. Cell Dev. Biol.
, vol.41
, pp. 9-22
-
-
Schlitzer, A.1
McGovern, N.2
Ginhoux, F.3
-
2
-
-
84875528275
-
The dendritic cell lineage: Ontogeny and function of dendritic cells and their subsets in the steady state and the inflamed setting
-
pmid : 23516985
-
M. Merad, P. Sathe, J. Helft, J. Miller, A. Mortha, The dendritic cell lineage: Ontogeny and function of dendritic cells and their subsets in the steady state and the inflamed setting. Annu. Rev. Immunol. 31, 563-604 (2013). doi: 10.1146/annurev-immunol-020711-074950; pmid: 23516985
-
(2013)
Annu. Rev. Immunol.
, vol.31
, pp. 563-604
-
-
Merad, M.1
Sathe, P.2
Helft, J.3
Miller, J.4
Mortha, A.5
-
3
-
-
84905107360
-
Dendritic cells, monocytes and macrophages: A unified nomenclature based on ontogeny
-
pmid : 25033907
-
M. Guilliams et al., Dendritic cells, monocytes and macrophages: A unified nomenclature based on ontogeny. Nat. Rev. Immunol. 14, 571-578 (2014). doi: 10.1038/nri3712; pmid: 25033907
-
(2014)
Nat. Rev. Immunol.
, vol.14
, pp. 571-578
-
-
Guilliams, M.1
-
4
-
-
65249089638
-
In vivo analysis of dendritic cell development and homeostasis
-
pmid 19286519
-
K. Liu et al., In vivo analysis of dendritic cell development and homeostasis. Science 324, 392-397 (2009). pmid: 19286519
-
(2009)
Science
, vol.324
, pp. 392-397
-
-
Liu, K.1
-
5
-
-
73949101833
-
The origin and development of nonlymphoid tissue CD103+ DCs
-
pmid : 20008528
-
F. Ginhoux et al., The origin and development of nonlymphoid tissue CD103+ DCs. J. Exp. Med. 206, 3115-3130 (2009). doi: 10.1084/jem.20091756; pmid: 20008528
-
(2009)
J. Exp. Med.
, vol.206
, pp. 3115-3130
-
-
Ginhoux, F.1
-
6
-
-
84878177936
-
A clonogenic progenitor with prominent plasmacytoid dendritic cell developmental potential
-
pmid : 23623382
-
N. Onai et al., A clonogenic progenitor with prominent plasmacytoid dendritic cell developmental potential. Immunity 38, 943-957 (2013). doi: 10.1016/j.immuni.2013.04.006; pmid: 23623382
-
(2013)
Immunity
, vol.38
, pp. 943-957
-
-
Onai, N.1
-
7
-
-
84931394611
-
Identification of cDC1- and cDC2- committed DC progenitors reveals early lineage priming at the common DC progenitor stage in the bone marrow
-
pmid : 26054720
-
A. Schlitzer et al., Identification of cDC1- and cDC2- committed DC progenitors reveals early lineage priming at the common DC progenitor stage in the bone marrow. Nat. Immunol. 16, 718-728 (2015). doi: 10.1038/ni.3200; pmid: 26054720
-
(2015)
Nat. Immunol.
, vol.16
, pp. 718-728
-
-
Schlitzer, A.1
-
8
-
-
84924743273
-
Restricted dendritic cell and monocyte progenitors in human cord blood and bone marrow
-
pmid : 25687283
-
J. Lee et al., Restricted dendritic cell and monocyte progenitors in human cord blood and bone marrow. J. Exp. Med. 212, 385-399 (2015). doi: 10.1084/jem.20141442; pmid: 25687283
-
(2015)
J. Exp. Med.
, vol.212
, pp. 385-399
-
-
Lee, J.1
-
9
-
-
84924724513
-
Circulating precursors of human CD1c+ and CD141+ dendritic cells
-
pmid : 25687281
-
G. Breton et al., Circulating precursors of human CD1c+ and CD141+ dendritic cells. J. Exp. Med. 212, 401-413 (2015). doi: 10.1084/jem.20141441; pmid: 25687281
-
(2015)
J. Exp. Med.
, vol.212
, pp. 401-413
-
-
Breton, G.1
-
10
-
-
0032773794
-
Plasmacytoid monocytes migrate to inflamed lymph nodes and produce large amounts of type i interferon
-
pmid : 10426316
-
M. Cella et al., Plasmacytoid monocytes migrate to inflamed lymph nodes and produce large amounts of type I interferon. Nat. Med. 5, 919-923 (1999). doi: 10.1038/11360; pmid: 10426316
-
(1999)
Nat. Med.
, vol.5
, pp. 919-923
-
-
Cella, M.1
-
11
-
-
0030949479
-
The enigmatic plasmacytoid T cells develop into dendritic cells with interleukin (IL)-3 and CD40-ligand
-
pmid : 9091583
-
G. Grouard et al., The enigmatic plasmacytoid T cells develop into dendritic cells with interleukin (IL)-3 and CD40-ligand. J. Exp. Med. 185, 1101-1112 (1997). doi: 10.1084/jem.185.6.1101; pmid: 9091583
-
(1997)
J. Exp. Med.
, vol.185
, pp. 1101-1112
-
-
Grouard, G.1
-
12
-
-
77953754015
-
Revised map of the human progenitor hierarchy shows the origin of macrophages and dendritic cells in early lymphoid development
-
pmid : 20543838
-
S. Doulatov et al., Revised map of the human progenitor hierarchy shows the origin of macrophages and dendritic cells in early lymphoid development. Nat. Immunol. 11, 585-593 (2010). doi: 10.1038/ni.1889; pmid: 20543838
-
(2010)
Nat. Immunol.
, vol.11
, pp. 585-593
-
-
Doulatov, S.1
-
13
-
-
0021931426
-
Differential expression of HLA-DR antigens in subsets of human CFU-GM
-
pmid 3929858
-
J. D. Griffin et al., Differential expression of HLA-DR antigens in subsets of human CFU-GM. Blood 66, 788-795 (1985). pmid: 3929858
-
(1985)
Blood
, vol.66
, pp. 788-795
-
-
Griffin, J.D.1
-
14
-
-
0034547923
-
BDCA-2, BDCA-3, and BDCA-4: Three markers for distinct subsets of dendritic cells in human peripheral blood
-
pmid : 11086035
-
A. Dzionek et al., BDCA-2, BDCA-3, and BDCA-4: Three markers for distinct subsets of dendritic cells in human peripheral blood. J. Immunol. 165, 6037-6046 (2000). doi: 10.4049/jimmunol.165.11.6037; pmid: 11086035
-
(2000)
J. Immunol.
, vol.165
, pp. 6037-6046
-
-
Dzionek, A.1
-
15
-
-
84893905629
-
Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types
-
pmid : 24531970
-
D. A. Jaitin et al., Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types. Science 343, 776-779 (2014). doi: 10.1126/science.1247651; pmid: 24531970
-
(2014)
Science
, vol.343
, pp. 776-779
-
-
Jaitin, D.A.1
-
19
-
-
84911016319
-
High-dimensional analysis of the murine myeloid cell system
-
pmid : 25306126
-
B. Becher et al., High-dimensional analysis of the murine myeloid cell system. Nat. Immunol. 15, 1181-1189 (2014). doi: 10.1038/ni.3006; pmid: 25306126
-
(2014)
Nat. Immunol.
, vol.15
, pp. 1181-1189
-
-
Becher, B.1
-
20
-
-
84880280631
-
ViSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia
-
pmid : 23685480
-
A. D. Amir et al., viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia. Nat. Biotechnol. 31, 545-552 (2013). doi: 10.1038/nbt.2594; pmid: 23685480
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 545-552
-
-
Amir, A.D.1
-
21
-
-
57249084011
-
Visualizing data using t-SNE
-
L. Van der Maaten, Visualizing data using t-SNE. J. Mach. Learn. Res. 9, 2579-2625 (2008).
-
(2008)
J. Mach. Learn. Res.
, vol.9
, pp. 2579-2625
-
-
Van Der Maaten, L.1
-
22
-
-
85170282443
-
A density-based algorithm for discovering clusters in large spatial databases with noise
-
M. Ester, H. P. Kriegel, J. Sander, X. Xu, A density-based algorithm for discovering clusters in large spatial databases with noise. KDD 1996, 226-231 (1996).
-
(1996)
KDD
, vol.1996
, pp. 226-231
-
-
Ester, M.1
Kriegel, H.P.2
Sander, J.3
Xu, X.4
-
23
-
-
84864293006
-
Human tissues contain CD141hi crosspresenting dendritic cells with functional homology to mouse CD103+ nonlymphoid dendritic cells
-
pmid : 22795876
-
M. Haniffa et al., Human tissues contain CD141hi crosspresenting dendritic cells with functional homology to mouse CD103+ nonlymphoid dendritic cells. Immunity 37, 60-73 (2012). doi: 10.1016/j.immuni.2012.04.012; pmid: 22795876
-
(2012)
Immunity
, vol.37
, pp. 60-73
-
-
Haniffa, M.1
-
25
-
-
33749335282
-
The Connectivity Map: Using gene-expression signatures to connect small molecules, genes, and disease
-
pmid : 17008526
-
J. Lamb et al., The Connectivity Map: Using gene-expression signatures to connect small molecules, genes, and disease. Science 313, 1929-1935 (2006). doi: 10.1126/science.1132939; pmid: 17008526
-
(2006)
Science
, vol.313
, pp. 1929-1935
-
-
Lamb, J.1
-
26
-
-
84977080410
-
Mpath maps multi-branching single-cell trajectories revealing progenitor cell progression during development
-
pmid : 27356503
-
J. Chen, A. Schlitzer, S. Chakarov, F. Ginhoux, M. Poidinger, Mpath maps multi-branching single-cell trajectories revealing progenitor cell progression during development. Nat. Commun. 7, 11988 (2016). doi: 10.1038/ncomms11988; pmid: 27356503
-
(2016)
Nat. Commun.
, vol.7
, pp. 11988
-
-
Chen, J.1
Schlitzer, A.2
Chakarov, S.3
Ginhoux, F.4
Poidinger, M.5
-
27
-
-
84900873950
-
The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells
-
pmid : 24658644
-
C. Trapnell et al., The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells. Nat. Biotechnol. 32, 381-386 (2014). doi: 10.1038/nbt.2859; pmid: 24658644
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 381-386
-
-
Trapnell, C.1
-
28
-
-
84974587998
-
Wishbone identifies bifurcating developmental trajectories from single-cell data
-
pmid : 27136076
-
M. Setty et al., Wishbone identifies bifurcating developmental trajectories from single-cell data. Nat. Biotechnol. 34, 637-645 (2016). doi: 10.1038/nbt.3569; pmid: 27136076
-
(2016)
Nat. Biotechnol.
, vol.34
, pp. 637-645
-
-
Setty, M.1
-
29
-
-
19644366699
-
Geometric diffusions as a tool for harmonic analysis and structure definition of data: Multiscale methods
-
pmid : 15899969
-
R. R. Coifman et al., Geometric diffusions as a tool for harmonic analysis and structure definition of data: Multiscale methods. Proc. Natl. Acad. Sci. U.S.A. 102, 7432-7437 (2005). doi: 10.1073/pnas.0500896102; pmid: 15899969
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 7432-7437
-
-
Coifman, R.R.1
-
30
-
-
84934442835
-
Data-driven phenotypic dissection of AML reveals progenitor-like cells that correlate with prognosis
-
pmid : 26095251
-
J. H. Levine et al., Data-driven phenotypic dissection of AML reveals progenitor-like cells that correlate with prognosis. Cell 162, 184-197 (2015). doi: 10.1016/j.cell.2015.05.047; pmid: 26095251
-
(2015)
Cell
, vol.162
, pp. 184-197
-
-
Levine, J.H.1
-
31
-
-
63849212105
-
Developmental regulation of MHC II expression and transport in human plasmacytoid-derived dendritic cells
-
pmid : 19015396
-
C. Sadaka, M.-A. Marloie-Provost, V. Soumelis, P. Benaroch, Developmental regulation of MHC II expression and transport in human plasmacytoid-derived dendritic cells. Blood 113, 2127-2135 (2009). doi: 10.1182/blood-2008-10-178152; pmid: 19015396
-
(2009)
Blood
, vol.113
, pp. 2127-2135
-
-
Sadaka, C.1
Marloie-Provost, M.-A.2
Soumelis, V.3
Benaroch, P.4
-
32
-
-
77953502765
-
Human CD141+ (BDCA-3)+ dendritic cells (DCs) represent a unique myeloid DC subset that crosspresents necrotic cell antigens
-
pmid : 20479116
-
S. L. Jongbloed et al., Human CD141+ (BDCA-3)+ dendritic cells (DCs) represent a unique myeloid DC subset that crosspresents necrotic cell antigens. J. Exp. Med. 207, 1247-1260 (2010). doi: 10.1084/jem.20092140; pmid: 20479116
-
(2010)
J. Exp. Med.
, vol.207
, pp. 1247-1260
-
-
Jongbloed, S.L.1
-
33
-
-
0037114743
-
Characterization of human blood dendritic cell subsets
-
pmid : 12393628
-
K. P. A. MacDonald et al., Characterization of human blood dendritic cell subsets. Blood 100, 4512-4520 (2002). doi: 10.1182/blood-2001-11-0097; pmid: 12393628
-
(2002)
Blood
, vol.100
, pp. 4512-4520
-
-
MacDonald, K.P.A.1
-
34
-
-
67449128181
-
CD2 distinguishes two subsets of human plasmacytoid dendritic cells with distinct phenotype and functions
-
pmid : 19454677
-
T. Matsui et al., CD2 distinguishes two subsets of human plasmacytoid dendritic cells with distinct phenotype and functions. J. Immunol. 182, 6815-6823 (2009). doi: 10.4049/jimmunol.0802008; pmid: 19454677
-
(2009)
J. Immunol.
, vol.182
, pp. 6815-6823
-
-
Matsui, T.1
-
35
-
-
84939945936
-
Human BDCA2+CD123+CD56+ dendritic cells (DCs) related to blastic plasmacytoid dendritic cell neoplasm represent a unique myeloid DC subset
-
pmid : 25779340
-
H. Yu et al., Human BDCA2+CD123+CD56+ dendritic cells (DCs) related to blastic plasmacytoid dendritic cell neoplasm represent a unique myeloid DC subset. Protein Cell 6, 297-306 (2015). doi: 10.1007/s13238-015-0140-x; pmid: 25779340
-
(2015)
Protein Cell
, vol.6
, pp. 297-306
-
-
Yu, H.1
-
36
-
-
79953059788
-
Plasmacytoid dendritic cells: Recent progress and open questions
-
pmid : 21219184
-
B. Reizis, A. Bunin, H. S. Ghosh, K. L. Lewis, V. Sisirak, Plasmacytoid dendritic cells: Recent progress and open questions. Annu. Rev. Immunol. 29, 163-183 (2011). doi: 10.1146/annurev-immunol-031210-101345; pmid: 21219184
-
(2011)
Annu. Rev. Immunol.
, vol.29
, pp. 163-183
-
-
Reizis, B.1
Bunin, A.2
Ghosh, H.S.3
Lewis, K.L.4
Sisirak, V.5
-
37
-
-
52949106528
-
Transcription factor E2-2 is an essential and specific regulator of plasmacytoid dendritic cell development
-
pmid : 18854153
-
B. Cisse et al., Transcription factor E2-2 is an essential and specific regulator of plasmacytoid dendritic cell development. Cell 135, 37-48 (2008). doi: 10.1016/j.cell.2008.09.016; pmid: 18854153
-
(2008)
Cell
, vol.135
, pp. 37-48
-
-
Cisse, B.1
-
41
-
-
84899574465
-
Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development
-
pmid : 24766814
-
S. C. Bendall et al., Single-cell trajectory detection uncovers progression and regulatory coordination in human B cell development. Cell 157, 714-725 (2014). doi: 10.1016/j.cell.2014.04.005; pmid: 24766814
-
(2014)
Cell
, vol.157
, pp. 714-725
-
-
Bendall, S.C.1
-
42
-
-
84937967684
-
The multifaceted biology of plasmacytoid dendritic cells
-
pmid : 26160613
-
M. Swiecki, M. Colonna, The multifaceted biology of plasmacytoid dendritic cells. Nat. Rev. Immunol. 15, 471-485 (2015). doi: 10.1038/nri3865; pmid: 26160613
-
(2015)
Nat. Rev. Immunol.
, vol.15
, pp. 471-485
-
-
Swiecki, M.1
Colonna, M.2
-
43
-
-
0034704229
-
A global geometric framework for nonlinear dimensionality reduction
-
pmid : 11125149
-
J. B. Tenenbaum, V. de Silva, J. C. Langford, A global geometric framework for nonlinear dimensionality reduction. Science 290, 2319-2323 (2000). doi: 10.1126/science.290.5500.2319; pmid: 11125149
-
(2000)
Science
, vol.290
, pp. 2319-2323
-
-
Tenenbaum, J.B.1
De Silva, V.2
Langford, J.C.3
-
44
-
-
84931406064
-
Batf3 maintains autoactivation of Irf8 for commitment of a CD8a+ conventional DC clonogenic progenitor
-
pmid : 26054719
-
G. E. Grajales-Reyes et al., Batf3 maintains autoactivation of Irf8 for commitment of a CD8a+ conventional DC clonogenic progenitor. Nat. Immunol. 16, 708-717 (2015). doi: 10.1038/ni.3197; pmid: 26054719
-
(2015)
Nat. Immunol.
, vol.16
, pp. 708-717
-
-
Grajales-Reyes, G.E.1
-
45
-
-
79959237655
-
Identification of CCR9- murine plasmacytoid DC precursors with plasticity to differentiate into conventional DCs
-
pmid : 21508410
-
A. Schlitzer et al., Identification of CCR9- murine plasmacytoid DC precursors with plasticity to differentiate into conventional DCs. Blood 117, 6562-6570 (2011). doi: 10.1182/blood-2010- 12-326678; pmid: 21508410
-
(2011)
Blood
, vol.117
, pp. 6562-6570
-
-
Schlitzer, A.1
-
46
-
-
0034777579
-
Toll-like receptor expression reveals CpG DNA as a unique microbial stimulus for plasmacytoid dendritic cells which synergizes with CD40 ligand to induce high amounts of IL-12
-
pmid : 11592079
-
A. Krug et al., Toll-like receptor expression reveals CpG DNA as a unique microbial stimulus for plasmacytoid dendritic cells which synergizes with CD40 ligand to induce high amounts of IL-12. Eur. J. Immunol. 31, 3026-3037 (2001). doi: 10.1002/1521-4141(2001010)31:10<3026::AID-IMMU3026>3.0.CO;2-H; pmid: 11592079
-
(2001)
Eur. J. Immunol.
, vol.31
, pp. 3026-3037
-
-
Krug, A.1
-
47
-
-
0036925295
-
Plasmacytoid dendritic cells: From specific surface markers to specific cellular functions
-
pmid : 12480257
-
A. Dzionek et al., Plasmacytoid dendritic cells: From specific surface markers to specific cellular functions. Hum. Immunol. 63, 1133-1148 (2002). doi: 10.1016/S0198-8859(02)00752-8; pmid: 12480257
-
(2002)
Hum. Immunol.
, vol.63
, pp. 1133-1148
-
-
Dzionek, A.1
-
48
-
-
0034304003
-
Plasmacytoid dendritic cells activated by influenza virus and CD40L drive a potent TH1 polarization
-
pmid : 11017101
-
M. Cella, F. Facchetti, A. Lanzavecchia, M. Colonna, Plasmacytoid dendritic cells activated by influenza virus and CD40L drive a potent TH1 polarization. Nat. Immunol. 1, 305-310 (2000). doi: 10.1038/79747; pmid: 11017101
-
(2000)
Nat. Immunol.
, vol.1
, pp. 305-310
-
-
Cella, M.1
Facchetti, F.2
Lanzavecchia, A.3
Colonna, M.4
-
49
-
-
33846438598
-
Plasmacytoid dendritic cells prime IL-10-producing T regulatory cells by inducible costimulator ligand
-
pmid : 17200410
-
T. Ito et al., Plasmacytoid dendritic cells prime IL-10-producing T regulatory cells by inducible costimulator ligand. J. Exp. Med. 204, 105-115 (2007). doi: 10.1084/jem.20061660; pmid: 17200410
-
(2007)
J. Exp. Med.
, vol.204
, pp. 105-115
-
-
Ito, T.1
-
50
-
-
0037903228
-
Activation of influenza virus-specific CD4+ and CD8+ T cells: A new role for plasmacytoid dendritic cells in adaptive immunity
-
pmid : 12511409
-
J.-F. Fonteneau et al., Activation of influenza virus-specific CD4+ and CD8+ T cells: A new role for plasmacytoid dendritic cells in adaptive immunity. Blood 101, 3520-3526 (2003). doi: 10.1182/blood-2002-10-3063; pmid: 12511409
-
(2003)
Blood
, vol.101
, pp. 3520-3526
-
-
Fonteneau, J.-F.1
-
51
-
-
34548674705
-
Antigen crosspresentation by human plasmacytoid dendritic cells
-
pmid : 17869134
-
G. Hoeffel et al., Antigen crosspresentation by human plasmacytoid dendritic cells. Immunity 27, 481-492 (2007). doi: 10.1016/j.immuni.2007.07.021; pmid: 17869134
-
(2007)
Immunity
, vol.27
, pp. 481-492
-
-
Hoeffel, G.1
-
52
-
-
17644372733
-
IPC: Professional type 1 interferon-producing cells and plasmacytoid dendritic cell precursors
-
pmid : 15771572
-
Y.-J. Liu, IPC: Professional type 1 interferon-producing cells and plasmacytoid dendritic cell precursors. Annu. Rev. Immunol. 23, 275-306 (2005). doi: 10.1146/annurev.immunol.23. 021704.115633; pmid: 15771572
-
(2005)
Annu. Rev. Immunol.
, vol.23
, pp. 275-306
-
-
Liu, Y.-J.1
-
53
-
-
0033546053
-
The nature of the principal type 1 interferon-producing cells in human blood
-
pmid : 10364556
-
F. P. Siegal et al., The nature of the principal type 1 interferon-producing cells in human blood. Science 284, 1835-1837 (1999). doi: 10.1126/science.284.5421.1835; pmid: 10364556
-
(1999)
Science
, vol.284
, pp. 1835-1837
-
-
Siegal, F.P.1
-
54
-
-
85007452312
-
Phenotype and natural history in 101 individuals with Pitt-Hopkins syndrome through an internet questionnaire system
-
pmid : 27072915
-
C. F. de Winter et al., Phenotype and natural history in 101 individuals with Pitt-Hopkins syndrome through an internet questionnaire system. Orphanet J. Rare Dis. 11, 37 (2016). doi: 10.1186/s13023-016-0422-2; pmid: 27072915
-
(2016)
Orphanet J. Rare Dis.
, vol.11
, pp. 37
-
-
De Winter, C.F.1
-
55
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
pmid : 19261174
-
B. Langmead, C. Trapnell, M. Pop, S. L. Salzberg, Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10, R25 (2009). doi: 10.1186/gb-2009-10-3-r25; pmid: 19261174
-
(2009)
Genome Biol.
, vol.10
, pp. R25
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
56
-
-
84976870685
-
Ensembl 2016
-
pmid : 26687719
-
A. Yates et al., Ensembl 2016. Nucleic Acids Res. 44, D710-D716 (2016). doi: 10.1093/nar/gkv1157; pmid: 26687719
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D710-D716
-
-
Yates, A.1
-
57
-
-
84941201582
-
Single-cell messenger RNA sequencing reveals rare intestinal cell types
-
pmid : 26287467
-
D. Grün et al., Single-cell messenger RNA sequencing reveals rare intestinal cell types. Nature 525, 251-255 (2015). doi: 10.1038/nature14966; pmid: 26287467
-
(2015)
Nature
, vol.525
, pp. 251-255
-
-
Grün, D.1
-
58
-
-
84929151009
-
Spatial reconstruction of single-cell gene expression data
-
pmid : 25867923
-
R. Satija, J. A. Farrell, D. Gennert, A. F. Schier, A. Regev, Spatial reconstruction of single-cell gene expression data. Nat. Biotechnol. 33, 495-502 (2015). doi: 10.1038/nbt.3192; pmid: 25867923
-
(2015)
Nat. Biotechnol.
, vol.33
, pp. 495-502
-
-
Satija, R.1
Farrell, J.A.2
Gennert, D.3
Schier, A.F.4
Regev, A.5
-
60
-
-
84865760395
-
GENCODE: The reference human genome annotation for the ENCODE Project
-
pmid : 22955987
-
J. Harrow et al., GENCODE: The reference human genome annotation for The ENCODE Project. Genome Res. 22, 1760-1774 (2012). doi: 10.1101/gr.135350.111; pmid: 22955987
-
(2012)
Genome Res.
, vol.22
, pp. 1760-1774
-
-
Harrow, J.1
-
61
-
-
79961123152
-
RSEM: Accurate transcript quantification from RNA-seq data with or without a reference genome
-
pmid : 21816040
-
B. Li, C. N. Dewey, RSEM: Accurate transcript quantification from RNA-seq data with or without a reference genome. BMC Bioinformatics 12, 323 (2011). doi: 10.1186/1471-2105-12-323; pmid: 21816040
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 323
-
-
Li, B.1
Dewey, C.N.2
-
62
-
-
84876799270
-
Normalization of mass cytometry data with bead standards
-
pmid : 23512433
-
R. Finck et al., Normalization of mass cytometry data with bead standards. Cytometry A 83A, 483-494 (2013). doi: 10.1002/cyto.a.22271; pmid: 23512433
-
(2013)
Cytometry A
, vol.83 A
, pp. 483-494
-
-
Finck, R.1
-
63
-
-
84856278095
-
Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within a continuum of CD8+ T cell phenotypes
-
pmid : 22265676
-
E. W. Newell, N. Sigal, S. C. Bendall, G. P. Nolan, M. M. Davis, Cytometry by time-of-flight shows combinatorial cytokine expression and virus-specific cell niches within a continuum of CD8+ T cell phenotypes. Immunity 36, 142-152 (2012). doi: 10.1016/j.immuni.2012.01.002; pmid: 22265676
-
(2012)
Immunity
, vol.36
, pp. 142-152
-
-
Newell, E.W.1
Sigal, N.2
Bendall, S.C.3
Nolan, G.P.4
Davis, M.M.5
-
64
-
-
85047699080
-
A new "logicle" display method avoids deceptive effects of logarithmic scaling for low signals and compensated data
-
pmid : 16604519
-
D. R. Parks, M. Roederer, W. A. Moore, A new "Logicle" display method avoids deceptive effects of logarithmic scaling for low signals and compensated data. Cytometry A 69A, 541-551 (2006). doi: 10.1002/cyto.a.20258; pmid: 16604519
-
(2006)
Cytometry A
, vol.69 A
, pp. 541-551
-
-
Parks, D.R.1
Roederer, M.2
Moore, W.A.3
-
66
-
-
84989347290
-
Cytofkit: A bioconductor package for an integrated mass cytometry data analysis pipeline
-
pmid : 27662185
-
H. Chen et al., Cytofkit: A bioconductor package for an integrated mass cytometry data analysis pipeline. PLOS Comput. Biol. 12, e1005112 (2016). doi: 10.1371/journal.pcbi.1005112; pmid: 27662185
-
(2016)
PLOS Comput. Biol.
, vol.12
, pp. e1005112
-
-
Chen, H.1
-
67
-
-
4544341015
-
Linear models and empirical Bayes methods for assessing differential expression in microarray experiments
-
pmid : 16646809
-
G. K. Smyth, Linear models and empirical Bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet. Mol. Biol. 3, 1-25 (2004). doi: 10.2202/1544-6115.1027; pmid: 16646809
-
(2004)
Stat. Appl. Genet. Mol. Biol.
, vol.3
, pp. 1-25
-
-
Smyth, G.K.1
-
68
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Y. Benjamini, Y. Hochberg, Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. R. Stat. Soc. B 57, 289-300 (1995).
-
(1995)
J. R. Stat. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
|