메뉴 건너뛰기




Volumn 8, Issue JUN, 2017, Pages

Multigenerational influences of the Fut2 gene on the dynamics of the gut microbiota in mice

Author keywords

Community robustness; Fut2; Legacy effects; Microbial community succession; Microbiota; Network analysis; Transgenerational effects

Indexed keywords

FUCOSYLTRANSFERASE; RNA 16S;

EID: 85020691652     PISSN: None     EISSN: 1664302X     Source Type: Journal    
DOI: 10.3389/fmicb.2017.00991     Document Type: Article
Times cited : (20)

References (100)
  • 1
    • 0034721164 scopus 로고    scopus 로고
    • Error and attack tolerance of complex networks
    • Albert, R., Jeong, H., and Barabasi, A.-L. (2000). Error and attack tolerance of complex networks. Nature 406, 378-382. doi: 10.1038/35019019
    • (2000) Nature , vol.406 , pp. 378-382
    • Albert, R.1    Jeong, H.2    Barabasi, A.-L.3
  • 2
    • 70349682626 scopus 로고    scopus 로고
    • Googling food webs: can an eigenvector measure species', Importance for Coextinctions?
    • Allesina, S., and Pascual, M. (2009). Googling food webs: can an eigenvector measure species', Importance for Coextinctions? PLoS Comput. Biol. 5:e1000494. doi: 10.1371/journal.pcbi.1000494
    • (2009) PLoS Comput Biol. , vol.5
    • Allesina, S.1    Pascual, M.2
  • 3
    • 33645053483 scopus 로고    scopus 로고
    • Distance-based tests for homogeneity of multivariate dispersions
    • Anderson, M. J. (2006). Distance-based tests for homogeneity of multivariate dispersions. Biometrics 62, 245-253. doi: 10.1111/j.1541-0420.2005.00440.x
    • (2006) Biometrics , vol.62 , pp. 245-253
    • Anderson, M.J.1
  • 4
    • 0038483826 scopus 로고    scopus 로고
    • Emergence of scaling in random networks
    • Barabási, A.-L., and Albert, R. (1999). Emergence of scaling in random networks. Science 286, 509-512. doi: 10.1126/science.286.5439.509
    • (1999) Science , vol.286 , pp. 509-512
    • Barabási, A.-L.1    Albert, R.2
  • 6
    • 65549106061 scopus 로고    scopus 로고
    • The architecture of mutualistic networks minimizes competition and increases biodiversity
    • Bastolla, U., Fortuna, M. A., Pascual-Garcia, A., Ferrera, A., Luque, B., and Bascompte, J. (2009). The architecture of mutualistic networks minimizes competition and increases biodiversity. Nature 458, 1018-1020. doi: 10.1038/nature07950
    • (2009) Nature , vol.458 , pp. 1018-1020
    • Bastolla, U.1    Fortuna, M.A.2    Pascual-Garcia, A.3    Ferrera, A.4    Luque, B.5    Bascompte, J.6
  • 7
    • 79956087877 scopus 로고    scopus 로고
    • Directed culturing of microorganisms using metatranscriptomics
    • Bomar, L., Maltz, M., Colston, S., and Graf, J. (2011). Directed culturing of microorganisms using metatranscriptomics. mBio 2:e12-11. doi: 10.1128/mBio.00012-11
    • (2011) mBio , vol.2
    • Bomar, L.1    Maltz, M.2    Colston, S.3    Graf, J.4
  • 8
    • 0038589165 scopus 로고    scopus 로고
    • The anatomy of a large-scale hypertextual web search engine
    • Brin, S., and Page, L. (1998). The anatomy of a large-scale hypertextual web search engine. Comput. Netw. Isdn Syst. 30, 107-117. doi: 10.1016/S0169-7552(98)00110-X
    • (1998) Comput. Netw. Isdn Syst. , vol.30 , pp. 107-117
    • Brin, S.1    Page, L.2
  • 9
    • 41349117788 scopus 로고    scopus 로고
    • Finding community structure in very large networks
    • Clauset, A., Newman, M. E. J., and Moore, C. (2004). Finding community structure in very large networks. Phys. Rev. E 70:6. doi: 10.1103/physreve.70.066111
    • (2004) Phys. Rev. E , vol.70 , pp. 6
    • Clauset, A.1    Newman, M.E.J.2    Moore, C.3
  • 10
    • 0037251969 scopus 로고    scopus 로고
    • The ribosomal database project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
    • Cole, J. R., Chai, B., Marsh, T. L., Farris, R. J., Wang, Q., Kulam, S. A., et al. (2003). The ribosomal database project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucl. Acids Res. 31, 442-443. doi: 10.1093/nar/gkg039
    • (2003) Nucl. Acids Res. , vol.31 , pp. 442-443
    • Cole, J.R.1    Chai, B.2    Marsh, T.L.3    Farris, R.J.4    Wang, Q.5    Kulam, S.A.6
  • 11
    • 60549114412 scopus 로고    scopus 로고
    • Robinsoniella peoriensis gen nov., sp. nov., isolated from a swine-manure storage pit and a human clinical source
    • Cotta, M. A., Whitehead, T. R., Falsen, E., Moore, E., and Lawson, P. A. (2009). Robinsoniella peoriensis gen. nov., sp. nov., isolated from a swine-manure storage pit and a human clinical source. Int. J. Syst. Evol. Microbiol. 59, 150-155. doi: 10.1099/ijs.0.65676-0
    • (2009) Int. J. Syst. Evol. Microbiol. , vol.59 , pp. 150-155
    • Cotta, M.A.1    Whitehead, T.R.2    Falsen, E.3    Moore, E.4    Lawson, P.A.5
  • 12
    • 84886440497 scopus 로고    scopus 로고
    • Utilisation of mucin glycans by the human gut symbiont Ruminococcus gnavus is strain-dependent
    • Crost, E. H., Tailford, L. E., Le Gall, G., Fons, M., Henrissat, B., and Juge, N. (2013). Utilisation of mucin glycans by the human gut symbiont Ruminococcus gnavus is strain-dependent. PLoS ONE 8:e76341. doi: 10.1371/journal.pone.0076341
    • (2013) PLoS ONE , vol.8
    • Crost, E.H.1    Tailford, L.E.2    Le Gall, G.3    Fons, M.4    Henrissat, B.5    Juge, N.6
  • 13
    • 43349094507 scopus 로고    scopus 로고
    • The igraph software package for complex network research
    • Csardi, G., and Nepusz, T. (2006). The igraph software package for complex network research. Int. J. Complex Syst. 1695.
    • (2006) Int. J. Complex Syst , pp. 1695
    • Csardi, G.1    Nepusz, T.2
  • 14
    • 84997606238 scopus 로고    scopus 로고
    • ABO antigen and secretor statuses are not associated with gut microbiota composition in 1,500 twins
    • Davenport, E. R., Goodrich, J. K., Bell, J. T., Spector, T. D., Ley, R. E., and Clark, A. G. (2016). ABO antigen and secretor statuses are not associated with gut microbiota composition in 1,500 twins. BMC Genomics 17:941. doi: 10.1186/s12864-016-3290-1
    • (2016) BMC Genomics , vol.17 , pp. 941
    • Davenport, E.R.1    Goodrich, J.K.2    Bell, J.T.3    Spector, T.D.4    Ley, R.E.5    Clark, A.G.6
  • 15
    • 77956631921 scopus 로고    scopus 로고
    • Improving indicator species analysis by combining groups of sites
    • De Cáceres, M., Legendre, P., and Moretti, M. (2010). Improving indicator species analysis by combining groups of sites. Oikos 119, 1674-1684. doi: 10.1111/j.1600-0706.2010.18334.x
    • (2010) Oikos , vol.119 , pp. 1674-1684
    • De Cáceres, M.1    Legendre, P.2    Moretti, M.3
  • 16
    • 84939567798 scopus 로고    scopus 로고
    • A biosynthetic pathway for a prominent class of microbiota-derived bile acids
    • Devlin, A. S., and Fischbach, M. A. (2015). A biosynthetic pathway for a prominent class of microbiota-derived bile acids. Nat. Chem. Biol. 11, 685-690. doi: 10.1038/nchembio.1864
    • (2015) Nat. Chem. Biol. , vol.11 , pp. 685-690
    • Devlin, A.S.1    Fischbach, M.A.2
  • 17
    • 77955386857 scopus 로고    scopus 로고
    • Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns
    • Dominguez-Bello, M. G., Costello, E. K., Contreras, M., Magris, M., Hidalgo, G., Fierer, N., et al. (2010). Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns. Proc. Natl. Acad. Sci. U.S.A. 107, 11971-11975. doi: 10.1073/pnas.1002601107
    • (2010) Proc. Natl. Acad. Sci. U.S.A. , vol.107 , pp. 11971-11975
    • Dominguez-Bello, M.G.1    Costello, E.K.2    Contreras, M.3    Magris, M.4    Hidalgo, G.5    Fierer, N.6
  • 18
    • 0035196783 scopus 로고    scopus 로고
    • Deficiency of reproductive tract alpha(1,2)fucosylated glycans and normal fertility in mice with targeted deletions of the FUT1 or FUT2 alpha(1,2)fucosyltransferase locus
    • Domino, S. E., Zhang, L., Gillespie, P. J., Saunders, T. L., and Lowe, J. B. (2001). Deficiency of reproductive tract alpha(1,2)fucosylated glycans and normal fertility in mice with targeted deletions of the FUT1 or FUT2 alpha(1,2)fucosyltransferase locus. Mol. Cell. Biol. 21, 8336-8345. doi: 10.1128/MCB.21.24.8336-8345.2001
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 8336-8345
    • Domino, S.E.1    Zhang, L.2    Gillespie, P.J.3    Saunders, T.L.4    Lowe, J.B.5
  • 19
    • 77957244650 scopus 로고    scopus 로고
    • Search and clustering orders of magnitude faster than BLAST
    • Edgar, R. C. (2010). Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461. doi: 10.1093/bioinformatics/btq461
    • (2010) Bioinformatics , vol.26 , pp. 2460-2461
    • Edgar, R.C.1
  • 20
    • 33645102172 scopus 로고    scopus 로고
    • Species loss and secondary extinctions in simple and complex model communities
    • Eklof, A., and Ebenman, B. (2006). Species loss and secondary extinctions in simple and complex model communities. J. Anim. Ecol. 75, 239-246. doi: 10.1111/j.1365-2656.2006.01041.x
    • (2006) J. Anim. Ecol. , vol.75 , pp. 239-246
    • Eklof, A.1    Ebenman, B.2
  • 21
    • 78149317654 scopus 로고    scopus 로고
    • The microbiota mediates pathogen clearance from the gut lumen after non-typhoidal Salmonella diarrhea
    • Endt, K., Stecher, B., Chaffron, S., Slack, E., Tchitchek, N., Benecke, A., et al. (2010). The microbiota mediates pathogen clearance from the gut lumen after non-typhoidal Salmonella diarrhea. PLoS Pathog. 6:e1001097. doi: 10.1371/journal.ppat.1001097
    • (2010) PLoS Pathog. , vol.6
    • Endt, K.1    Stecher, B.2    Chaffron, S.3    Slack, E.4    Tchitchek, N.5    Benecke, A.6
  • 23
    • 84968918909 scopus 로고    scopus 로고
    • Population-level analysis of gut microbiome variation
    • Falony, G., Joossens, M., Vieira-Silva, S., Wang, J., Darzi, Y., Faust, K., et al. (2016). Population-level analysis of gut microbiome variation. Science 352, 560-564. doi: 10.1126/science.aad3503
    • (2016) Science , vol.352 , pp. 560-564
    • Falony, G.1    Joossens, M.2    Vieira-Silva, S.3    Wang, J.4    Darzi, Y.5    Faust, K.6
  • 24
    • 33750177351 scopus 로고
    • Centrality in social networks conceptual clarification
    • Freeman, L. C. (1979). Centrality in social networks conceptual clarification. Soc. Netw. 1, 215-239. doi: 10.1016/0378-8733(78)90021-7
    • (1979) Soc. Netw. , vol.1 , pp. 215-239
    • Freeman, L.C.1
  • 25
    • 84865733148 scopus 로고    scopus 로고
    • Inferring correlation networks from genomic survey data
    • Friedman, J., and Alm, E. J. (2012). Inferring correlation networks from genomic survey data. PLoS Computat. Biol. 8:e1002687. doi: 10.1371/journal.pcbi.1002687
    • (2012) PLoS Computat. Biol. , vol.8
    • Friedman, J.1    Alm, E.J.2
  • 26
    • 0035981014 scopus 로고    scopus 로고
    • Universal behavior of load distribution in scale-free networks
    • Goh, K. I., Kahng, B., and Kim, D. (2001). Universal behavior of load distribution in scale-free networks. Phys. Rev. Lett. 87:278701. doi: 10.1103/physrevlett.87.278701
    • (2001) Phys. Rev. Lett. , vol.87 , pp. 278701
    • Goh, K.I.1    Kahng, B.2    Kim, D.3
  • 28
    • 0033860925 scopus 로고    scopus 로고
    • Null model analysis of species co-occurrence patterns
    • Gotelli, N. J. (2000). Null model analysis of species co-occurrence patterns. Ecology 81, 2606-2621. doi: 10.1890/0012-9658(2000)081[2606:NMAOSC]2.0.CO;2
    • (2000) Ecology , vol.81 , pp. 2606-2621
    • Gotelli, N.J.1
  • 29
    • 84907208430 scopus 로고    scopus 로고
    • Innate lymphoid cells regulate intestinal epithelial cell glycosylation
    • Goto, Y., Obata, T., Kunisawa, J., Sato, S., Ivanov, I. I., Lamichhane, A., et al. (2014). Innate lymphoid cells regulate intestinal epithelial cell glycosylation. Science 345:1254009. doi: 10.1126/science.1254009
    • (2014) Science , vol.345 , pp. 1254009
    • Goto, Y.1    Obata, T.2    Kunisawa, J.3    Sato, S.4    Ivanov, I.I.5    Lamichhane, A.6
  • 30
    • 84930244273 scopus 로고    scopus 로고
    • The family rikenellaceae
    • eds E. Rosenberg, E. F. Delong, S. Lory, E. Stackebrandt, and F. Thompson (Berlin: Springer)
    • Graf, J. (2014). "The family rikenellaceae," in The Prokaryotes: Other Major Lineages of Bacteria and The Archaea, eds E. Rosenberg, E. F. Delong, S. Lory, E. Stackebrandt, and F. Thompson (Berlin: Springer), 857-859.
    • (2014) in The Prokaryotes: Other Major Lineages of Bacteria and The Archaea , pp. 857-859
    • Graf, J.1
  • 31
    • 40449099160 scopus 로고    scopus 로고
    • Transfer of Bacteroides splanchnicus to Odoribacter gen nov. as Odoribacter splanchnicus comb. nov., and description of Odoribacter denticanis sp. nov., isolated from the crevicular spaces of canine periodontitis patients
    • Hardham, J. M., King, K. W., Dreier, K., Wong, J., Strietzel, C., Eversole, R. R., et al. (2008). Transfer of Bacteroides splanchnicus to Odoribacter gen. nov. as Odoribacter splanchnicus comb. nov., and description of Odoribacter denticanis sp. nov., isolated from the crevicular spaces of canine periodontitis patients. Int. J. Syst. Evol. Microbiol. 58, 103-109. doi: 10.1099/ijs.0.63458-0
    • (2008) Int. J. Syst. Evol. Microbiol. , vol.58 , pp. 103-109
    • Hardham, J.M.1    King, K.W.2    Dreier, K.3    Wong, J.4    Strietzel, C.5    Eversole, R.R.6
  • 32
    • 84862777474 scopus 로고    scopus 로고
    • Commensal bacteria-derived signals regulate basophil hematopoiesis and allergic inflammation
    • Hill, D. A., Siracusa, M. C., Abt, M. C., Kim, B. S., Kobuley, D., Kubo, M., et al. (2012). Commensal bacteria-derived signals regulate basophil hematopoiesis and allergic inflammation. Nat. Med. 18, 538-546. doi: 10.1038/nm.2657
    • (2012) Nat. Med. , vol.18 , pp. 538-546
    • Hill, D.A.1    Siracusa, M.C.2    Abt, M.C.3    Kim, B.S.4    Kobuley, D.5    Kubo, M.6
  • 33
    • 1542316379 scopus 로고    scopus 로고
    • Bacterial contributions to mammalian gut development
    • Hooper, L. V. (2004). Bacterial contributions to mammalian gut development. Trends Microbiol. 12, 129-134. doi: 10.1016/j.tim.2004.01.001
    • (2004) Trends Microbiol. , vol.12 , pp. 129-134
    • Hooper, L.V.1
  • 34
    • 0035054508 scopus 로고    scopus 로고
    • Glycans as legislators of host-microbial interactions: spanning the spectrum from symbiosis to pathogenicity
    • Hooper, L. V., and Gordon, J. I. (2001). Glycans as legislators of host-microbial interactions: spanning the spectrum from symbiosis to pathogenicity. Glycobiology 11, 1R-10R. doi: 10.1093/glycob/11.2.1R
    • (2001) Glycobiology , vol.11 , pp. 1R-10R
    • Hooper, L.V.1    Gordon, J.I.2
  • 35
    • 15444357984 scopus 로고    scopus 로고
    • Helicobacter pylori adhesin binding fucosylated histo-blood group antigens revealed by retagging
    • Ilver, D., Arnqvist, A., Ogren, J., Frick, I.-M., Kersulyte, D., Incecik, E. T., et al. (1998). Helicobacter pylori adhesin binding fucosylated histo-blood group antigens revealed by retagging. Science 279, 373-377. doi: 10.1126/science.279.5349.373
    • (1998) Science , vol.279 , pp. 373-377
    • Ilver, D.1    Arnqvist, A.2    Ogren, J.3    Frick, I.-M.4    Kersulyte, D.5    Incecik, E.T.6
  • 36
    • 0034609791 scopus 로고    scopus 로고
    • The large-scale organization of metabolic networks
    • Jeong, H., Tombor, B., Albert, R., Oltvai, Z. N., and Barabasi, A. L. (2000). The large-scale organization of metabolic networks. Nature 407, 651-654. doi: 10.1038/35036627
    • (2000) Nature , vol.407 , pp. 651-654
    • Jeong, H.1    Tombor, B.2    Albert, R.3    Oltvai, Z.N.4    Barabasi, A.L.5
  • 37
    • 84885711264 scopus 로고    scopus 로고
    • Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota
    • Kashyap, P. C., Marcobal, A., Ursell, L. K., Smits, S. A., Sonnenburg, E. D., Costello, E. K., et al. (2013). Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. Proc. Natl. Acad. Sci. U.S.A. 110, 17059-17064. doi: 10.1073/pnas.1306070110
    • (2013) Proc. Natl. Acad. Sci. U.S.A. , vol.110 , pp. 17059-17064
    • Kashyap, P.C.1    Marcobal, A.2    Ursell, L.K.3    Smits, S.A.4    Sonnenburg, E.D.5    Costello, E.K.6
  • 39
    • 0033921797 scopus 로고    scopus 로고
    • Ancient origin of the null allele se428 of the human ABO-secretor locus (FUT2)
    • Koda, Y., Tachida, H., Soejima, M., Takenaka, O., and Kimura, H. (2000). Ancient origin of the null allele se428 of the human ABO-secretor locus (FUT2). J. Mol. Evol. 50, 243-248. doi: 10.1007/s002399910028
    • (2000) J. Mol. Evol. , vol.50 , pp. 243-248
    • Koda, Y.1    Tachida, H.2    Soejima, M.3    Takenaka, O.4    Kimura, H.5
  • 40
    • 0032967877 scopus 로고    scopus 로고
    • Distance-based redundancy analysis: testing multispecies responses in multifactorial ecological experiments
    • Legendre, P., and Anderson, M. J. (1999). Distance-based redundancy analysis: testing multispecies responses in multifactorial ecological experiments. Ecol. Monogr. 69, 1-24. doi: 10.1890/0012-9615 (1999)069[0001:DBRATM]2.0.CO;2
    • (1999) Ecol. Monogr. , vol.69 , pp. 1-24
    • Legendre, P.1    Anderson, M.J.2
  • 41
    • 0034782218 scopus 로고    scopus 로고
    • Ecologically meaningful transformations for ordination of species data
    • Legendre, P., and Gallagher, E. (2001). Ecologically meaningful transformations for ordination of species data. Oecologia 129, 271-280. doi: 10.1007/s004420100716
    • (2001) Oecologia , vol.129 , pp. 271-280
    • Legendre, P.1    Gallagher, E.2
  • 42
    • 0038239855 scopus 로고    scopus 로고
    • Human susceptibility and resistance to Norwalk virus infection
    • Lindesmith, L., Moe, C., Marionneau, S., Ruvoen, N., Jiang, X., Lindbland, L., et al. (2003). Human susceptibility and resistance to Norwalk virus infection. Nat. Med. 9, 548-553. doi: 10.1038/nm860
    • (2003) Nat. Med. , vol.9 , pp. 548-553
    • Lindesmith, L.1    Moe, C.2    Marionneau, S.3    Ruvoen, N.4    Jiang, X.5    Lindbland, L.6
  • 43
    • 84875366034 scopus 로고    scopus 로고
    • The role of biogeography in shaping diversity of the intestinal microbiota in house mice
    • Linnenbrink, M., Wang, J., Hardouin, E. A., Künzel, S., Metzler, D., and Baines, J. F. (2013). The role of biogeography in shaping diversity of the intestinal microbiota in house mice. Mol. Ecol. 22, 1904-1916. doi: 10.1111/mec.12206
    • (2013) Mol. Ecol. , vol.22 , pp. 1904-1916
    • Linnenbrink, M.1    Wang, J.2    Hardouin, E.A.3    Künzel, S.4    Metzler, D.5    Baines, J.F.6
  • 44
    • 0031595630 scopus 로고    scopus 로고
    • Extensive polymorphism of the FUT2 gene in an African (Xhosa) population of South Africa
    • Liu, Y., Koda, Y., Soejima, M., Pang, H., Schlaphoff, T., Du Toit, E. D., et al. (1998). Extensive polymorphism of the FUT2 gene in an African (Xhosa) population of South Africa. Hum. Genet. 103, 204-210. doi: 10.1007/s004390050808
    • (1998) Hum. Genet. , vol.103 , pp. 204-210
    • Liu, Y.1    Koda, Y.2    Soejima, M.3    Pang, H.4    Schlaphoff, T.5    Du Toit, E.D.6
  • 45
    • 75449108162 scopus 로고    scopus 로고
    • Linking biodiversity and ecosystems: towards a unifying ecological theory
    • Loreau, M. (2010). Linking biodiversity and ecosystems: towards a unifying ecological theory. Philos. Trans. R. Soc. B Biol. Sci. 365, 49-60. doi: 10.1098/rstb.2009.0155
    • (2010) Philos. Trans. R. Soc. B Biol. Sci. , vol.365 , pp. 49-60
    • Loreau, M.1
  • 46
    • 29144464937 scopus 로고    scopus 로고
    • UniFrac: a new phylogenetic method for comparing microbial communities
    • Lozupone, C., and Knight, R. (2005). UniFrac: a new phylogenetic method for comparing microbial communities. Appl. Environ. Microbiol. 71, 8228-8235. doi: 10.1128/AEM.71.12.8228-8235.2005
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 8228-8235
    • Lozupone, C.1    Knight, R.2
  • 47
    • 71049182586 scopus 로고    scopus 로고
    • Fut2-null mice display an altered glycosylation profile and impaired BabA-mediated Helicobacter pylori adhesion to gastric mucosa
    • Magalhaes, A., Gomes, J., Ismail, M. N., Haslam, S. M., Mendes, N., Osorio, H., et al. (2009). Fut2-null mice display an altered glycosylation profile and impaired BabA-mediated Helicobacter pylori adhesion to gastric mucosa. Glycobiology 19, 1525-1536. doi: 10.1093/glycob/cwp131
    • (2009) Glycobiology , vol.19 , pp. 1525-1536
    • Magalhaes, A.1    Gomes, J.2    Ismail, M.N.3    Haslam, S.M.4    Mendes, N.5    Osorio, H.6
  • 48
    • 24044455869 scopus 로고    scopus 로고
    • Genome sequencing in microfabricated high-density picolitre reactors
    • Margulies, M., Egholm, M., Altman, W. E., Attiya, S., Bader, J. S., Bemben, L. A., et al. (2005). Genome sequencing in microfabricated high-density picolitre reactors. Nature 437, 376-380. doi: 10.1038/nature03959
    • (2005) Nature , vol.437 , pp. 376-380
    • Margulies, M.1    Egholm, M.2    Altman, W.E.3    Attiya, S.4    Bader, J.S.5    Bemben, L.A.6
  • 49
    • 77955398591 scopus 로고    scopus 로고
    • Fucosyltransferase 2 (FUT2) non-secretor status is associated with Crohn's disease
    • McGovern, D. P. B., Jones, M. R., Taylor, K. D., Marciante, K., Yan, X., Dubinsky, M., et al. (2010). Fucosyltransferase 2 (FUT2) non-secretor status is associated with Crohn's disease. Hum. Mol. Genet. 19, 1-9. doi: 10.1093/hmg/ddq248
    • (2010) Hum. Mol. Genet. , vol.19 , pp. 1-9
    • McGovern, D.P.B.1    Jones, M.R.2    Taylor, K.D.3    Marciante, K.4    Yan, X.5    Dubinsky, M.6
  • 50
    • 16644365084 scopus 로고    scopus 로고
    • Tolerance of pollination networks to species extinctions
    • Memmott, J., Waser, N. M., and Price, M. V. (2004). Tolerance of pollination networks to species extinctions. Proc. R. Soc. B-Biol. Sci. 271, 2605-2611. doi: 10.1098/rspb.2004.2909
    • (2004) Proc. R. Soc. B-Biol. Sci. , vol.271 , pp. 2605-2611
    • Memmott, J.1    Waser, N.M.2    Price, M.V.3
  • 51
    • 35348991032 scopus 로고    scopus 로고
    • Bacterial symbionts induce a FUT2-dependent fucosylated niche on colonic epithelium via ERK and JNK signaling
    • Meng, D., Newburg, D. S., Young, C., Baker, A., Tonkonogy, S. L., Sartor, R. B., et al. (2007). Bacterial symbionts induce a FUT2-dependent fucosylated niche on colonic epithelium via ERK and JNK signaling. Am. J. Physiol. Gastro. Liv. Physiol. 293, 780-787.
    • (2007) Am. J. Physiol. Gastro. Liv. Physiol. , vol.293 , pp. 780-787
    • Meng, D.1    Newburg, D.S.2    Young, C.3    Baker, A.4    Tonkonogy, S.L.5    Sartor, R.B.6
  • 52
    • 84863995610 scopus 로고    scopus 로고
    • Diversity of interaction types and ecological community stability
    • Mougi, A., and Kondoh, M. (2012). Diversity of interaction types and ecological community stability. Science 337, 349-351. doi: 10.1126/science.1220529
    • (2012) Science , vol.337 , pp. 349-351
    • Mougi, A.1    Kondoh, M.2
  • 53
    • 69449092649 scopus 로고    scopus 로고
    • Parasutterella excrementihominis gen nov., sp. nov., a member of the family Alcaligenaceae isolated from human faeces
    • Nagai, F., Morotomi, M., Sakon, H., and Tanaka, R. (2009). Parasutterella excrementihominis gen. nov., sp. nov., a member of the family Alcaligenaceae isolated from human faeces. Int. J. Syst. Evol. Microbiol. 59, 1793-1797. doi: 10.1099/ijs.0.002519-0
    • (2009) Int. J. Syst. Evol. Microbiol. , vol.59 , pp. 1793-1797
    • Nagai, F.1    Morotomi, M.2    Sakon, H.3    Tanaka, R.4
  • 54
    • 77953318953 scopus 로고    scopus 로고
    • Alistipes indistinctus sp nov. and Odoribacter laneus sp. nov., common members of the human intestinal microbiota isolated from faeces
    • Nagai, F., Morotomi, M., Watanabe, Y., Sakon, H., and Tanaka, R. (2010). Alistipes indistinctus sp. nov. and Odoribacter laneus sp. nov., common members of the human intestinal microbiota isolated from faeces. Int. J. Syst. Evol. Microbiol. 60, 1296-1302. doi: 10.1099/ijs.0.014571-0
    • (2010) Int. J. Syst. Evol. Microbiol. , vol.60 , pp. 1296-1302
    • Nagai, F.1    Morotomi, M.2    Watanabe, Y.3    Sakon, H.4    Tanaka, R.5
  • 55
    • 0037270375 scopus 로고    scopus 로고
    • The role of indigenous microflora in the development of murine intestinal fucosyl- and sialyltransferases
    • Nanthakumar, N. N., Dai, D., Newburg, D. S., and Walker, W. A. (2003). The role of indigenous microflora in the development of murine intestinal fucosyl- and sialyltransferases. FASEB J. 17, 44-46.
    • (2003) FASEB J. , vol.17 , pp. 44-46
    • Nanthakumar, N.N.1    Dai, D.2    Newburg, D.S.3    Walker, W.A.4
  • 56
    • 0025176078 scopus 로고
    • Fucosylated oligosaccharides of human milk protect suckling mice from heat-stabile enterotoxin of Escherichia coli
    • Newburg, D. S., Pickering, L. K., Mccluer, R. H., and Cleary, T. G. (1990). Fucosylated oligosaccharides of human milk protect suckling mice from heat-stabile enterotoxin of Escherichia coli. J. Infect. Dis. 162, 1075-1080. doi: 10.1093/infdis/162.5.1075
    • (1990) J. Infect. Dis. , vol.162 , pp. 1075-1080
    • Newburg, D.S.1    Pickering, L.K.2    Mccluer, R.H.3    Cleary, T.G.4
  • 57
    • 37649028224 scopus 로고    scopus 로고
    • Finding and evaluating community structure in networks
    • Newman, M. E. J., and Girvan, M. (2004). Finding and evaluating community structure in networks. Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 69:026113. doi: 10.1103/physreve.69.026113
    • (2004) Phys. Rev. E Stat. Nonlin. Soft Matter Phys. , vol.69 , pp. 026113
    • Newman, M.E.J.1    Girvan, M.2
  • 58
    • 84885573828 scopus 로고    scopus 로고
    • Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens
    • Ng, K. M., Ferreyra, J. A., Higginbottom, S. K., Lynch, J. B., Kashyap, P. C., Gopinath, S., et al. (2013). Microbiota-liberated host sugars facilitate post-antibiotic expansion of enteric pathogens. Nature 502, 96-99. doi: 10.1038/nature12503
    • (2013) Nature , vol.502 , pp. 96-99
    • Ng, K.M.1    Ferreyra, J.A.2    Higginbottom, S.K.3    Lynch, J.B.4    Kashyap, P.C.5    Gopinath, S.6
  • 60
    • 84870501494 scopus 로고    scopus 로고
    • Fucose sensing regulates bacterial intestinal colonization
    • Pacheco, A. R., Curtis, M. M., Ritchie, J. M., Munera, D., Waldor, M. K., Moreira, C. G., et al. (2012). Fucose sensing regulates bacterial intestinal colonization. Nature 492, 113-117. doi: 10.1038/nature11623
    • (2012) Nature , vol.492 , pp. 113-117
    • Pacheco, A.R.1    Curtis, M.M.2    Ritchie, J.M.3    Munera, D.4    Waldor, M.K.5    Moreira, C.G.6
  • 61
    • 0035208811 scopus 로고    scopus 로고
    • Polymorphism of the human ABO-secretor locus (FUT2) in four populations in Asia: indication of distinct Asian subpopulations
    • Pang, H., Koda, Y., Soejima, M., Fujitani, N., Ogaki, T., Saito, A., et al. (2001). Polymorphism of the human ABO-secretor locus (FUT2) in four populations in Asia: indication of distinct Asian subpopulations. Ann. Hum. Genet. 65, 429-437. doi: 10.1046/j.1469-1809.2001.6550429.x
    • (2001) Ann. Hum. Genet. , vol.65 , pp. 429-437
    • Pang, H.1    Koda, Y.2    Soejima, M.3    Fujitani, N.4    Ogaki, T.5    Saito, A.6
  • 62
    • 84908075358 scopus 로고    scopus 로고
    • Epithelial IL-22RA1-mediated fucosylation promotes intestinal colonization resistance to an opportunistic pathogen
    • Pham, T. A. N., Clare, S., Goulding, D., Arasteh, J. M., Stares, M. D., Browne, H. P., et al. (2014). Epithelial IL-22RA1-mediated fucosylation promotes intestinal colonization resistance to an opportunistic pathogen. Cell Host Microbe 16, 504-516. doi: 10.1016/j.chom.2014.08.017
    • (2014) Cell Host Microbe , vol.16 , pp. 504-516
    • Pham, T.A.N.1    Clare, S.2    Goulding, D.3    Arasteh, J.M.4    Stares, M.D.5    Browne, H.P.6
  • 63
    • 84908403149 scopus 로고    scopus 로고
    • Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in sickness
    • Pickard, J. M., Maurice, C. F., Kinnebrew, M. A., Abt, M. C., Schenten, D., Golovkina, T. V., et al. (2014). Rapid fucosylation of intestinal epithelium sustains host-commensal symbiosis in sickness. Nature 514, 638-641. doi: 10.1038/nature13823
    • (2014) Nature , vol.514 , pp. 638-641
    • Pickard, J.M.1    Maurice, C.F.2    Kinnebrew, M.A.3    Abt, M.C.4    Schenten, D.5    Golovkina, T.V.6
  • 65
    • 77949718257 scopus 로고    scopus 로고
    • FastTree 2 - approximately maximum-likelihood trees for large alignments
    • Price, M. N., Dehal, P. S., and Arkin, A. P. (2010). FastTree 2 - approximately maximum-likelihood trees for large alignments. PLoS ONE 5:e9490. doi: 10.1371/journal.pone.0009490
    • (2010) PLoS ONE , vol.5
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 67
    • 84967195417 scopus 로고    scopus 로고
    • The evolution of cooperation within the gut microbiota
    • Rakoff-Nahoum, S., Foster, K. R., and Comstock, L. E. (2016). The evolution of cooperation within the gut microbiota. Nature 533, 255-259. doi: 10.1038/nature17626
    • (2016) Nature , vol.533 , pp. 255-259
    • Rakoff-Nahoum, S.1    Foster, K.R.2    Comstock, L.E.3
  • 68
    • 0000442911 scopus 로고
    • The use and interpretation of principal component analysis in applied research. sankhyā
    • Rao, C. R. (1964). The use and interpretation of principal component analysis in applied research. sankhyā. Ind. J. Statis. Ser. A (1961-2002) 26, 329-358.
    • (1964) Ind. J. Statis. Ser. A (1961-2002) , vol.26 , pp. 329-358
    • Rao, C.R.1
  • 70
    • 82755168804 scopus 로고    scopus 로고
    • Colonic mucosa-associated microbiota is influenced by an interaction of Crohn disease and FUT2 (Secretor) genotype
    • Rausch, P., Rehman, A., Künzel, S., Häsler, R., Ott, S. J., Schreiber, S., et al. (2011). Colonic mucosa-associated microbiota is influenced by an interaction of Crohn disease and FUT2 (Secretor) genotype. Proc. Natl. Acad. Sci. U.S.A. 108, 19030-19035. doi: 10.1073/pnas.1106408108
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 19030-19035
    • Rausch, P.1    Rehman, A.2    Künzel, S.3    Häsler, R.4    Ott, S.J.5    Schreiber, S.6
  • 71
    • 84938807601 scopus 로고    scopus 로고
    • Expression of the blood-group-related gene B4galnt2 alters susceptibility to Salmonella infection
    • Rausch, P., Steck, N., Suwandi, A., Seidel, J. A., Künzel, S., Bhullar, K., et al. (2015b). Expression of the blood-group-related gene B4galnt2 alters susceptibility to Salmonella infection. PLoS Pathog. 11:e1005008. doi: 10.1371/journal.ppat.1005008
    • (2015) PLoS Pathog. , vol.11
    • Rausch, P.1    Steck, N.2    Suwandi, A.3    Seidel, J.A.4    Künzel, S.5    Bhullar, K.6
  • 72
    • 0013238319 scopus 로고    scopus 로고
    • Campylobacter jejuni binds Intestinal H(O) antigen (Fuca1, 2Galß1, 4GlcNAc), and Fucosyloligosaccharides of human milk inhibit its binding and infection
    • Ruiz-Palacios, G. M., Cervantes, L. E., Ramos, P., Chavez-Munguia, B., and Newburg, D. S. (2003). Campylobacter jejuni binds Intestinal H(O) antigen (Fuca1, 2Galß1, 4GlcNAc), and Fucosyloligosaccharides of human milk inhibit its binding and infection. J. Biol. Chem. 278, 14112-14120. doi: 10.1074/jbc.M207744200
    • (2003) J. Biol. Chem. , vol.278 , pp. 14112-14120
    • Ruiz-Palacios, G.M.1    Cervantes, L.E.2    Ramos, P.3    Chavez-Munguia, B.4    Newburg, D.S.5
  • 73
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: open source, platform-independent, community-supported software for describing and comparing microbial communities
    • Schloss, P. D., Westcott, S. L., Ryabin, T., Hall, J. R., Hartmann, M., Hollister, E. B., et al. (2009). Introducing mothur: open source, platform-independent, community-supported software for describing and comparing microbial communities. Appl. Environ. Microbiol. 75, 7537-7541. doi: 10.1128/AEM.01541-09
    • (2009) Appl. Environ. Microbiol. , vol.75 , pp. 7537-7541
    • Schloss, P.D.1    Westcott, S.L.2    Ryabin, T.3    Hall, J.R.4    Hartmann, M.5    Hollister, E.B.6
  • 74
    • 77956808652 scopus 로고    scopus 로고
    • Robinsoniella peoriensis bacteremia in a patient with pancreatic cancer
    • Shen, D., Chen, R., Ye, L., Luo, Y., and Tang, Y.-W. (2010). Robinsoniella peoriensis bacteremia in a patient with pancreatic cancer. J. Clin. Microbiol. 48, 3448-3450. doi: 10.1128/JCM.00477-10
    • (2010) J. Clin. Microbiol. , vol.48 , pp. 3448-3450
    • Shen, D.1    Chen, R.2    Ye, L.3    Luo, Y.4    Tang, Y.-W.5
  • 75
    • 79952748287 scopus 로고    scopus 로고
    • Unravelling the effects of the environment and host genotype on the gut microbiome
    • Spor, A., Koren, O., and Ley, R. (2011). Unravelling the effects of the environment and host genotype on the gut microbiome. Nat. Rev. Microbiol. 9, 279-290. doi: 10.1038/nrmicro2540
    • (2011) Nat. Rev. Microbiol. , vol.9 , pp. 279-290
    • Spor, A.1    Koren, O.2    Ley, R.3
  • 76
    • 84862623932 scopus 로고    scopus 로고
    • Expression of the blood-group-related glycosyltransferase B4galnt2 influences the intestinal microbiota in mice
    • Staubach, F., Künzel, S., Baines, A. C., Yee, A., Mcgee, B. M., Bäckhed, F., et al. (2012). Expression of the blood-group-related glycosyltransferase B4galnt2 influences the intestinal microbiota in mice. ISME J. 6, 1345-1355. doi: 10.1038/ismej.2011.204
    • (2012) ISME J. , vol.6 , pp. 1345-1355
    • Staubach, F.1    Künzel, S.2    Baines, A.C.3    Yee, A.4    Mcgee, B.M.5    Bäckhed, F.6
  • 78
    • 0345830652 scopus 로고    scopus 로고
    • Dysbiosis in inflammatory bowel disease
    • Tamboli, C. P., Neut, C., Desreumaux, P., and Colombel, J. F. (2004). Dysbiosis in inflammatory bowel disease. Gut 53, 1-4. doi: 10.1136/gut.53.1.1
    • (2004) Gut , vol.53 , pp. 1-4
    • Tamboli, C.P.1    Neut, C.2    Desreumaux, P.3    Colombel, J.F.4
  • 79
    • 84905256618 scopus 로고    scopus 로고
    • Correlation between interaction strengths drives stability in large ecological networks
    • Tang, S., Pawar, S., and Allesina, S. (2014). Correlation between interaction strengths drives stability in large ecological networks. Ecol. Lett. 17, 1094-1100. doi: 10.1111/ele.12312
    • (2014) Ecol. Lett. , vol.17 , pp. 1094-1100
    • Tang, S.1    Pawar, S.2    Allesina, S.3
  • 80
    • 78649270064 scopus 로고    scopus 로고
    • Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes
    • Tasse, L., Bercovici, J., Pizzut-Serin, S., Robe, P., Tap, J., Klopp, C., et al. (2010). Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes. Genome Res. 20, 1605-1612. doi: 10.1101/gr.108332.110
    • (2010) Genome Res. , vol.20 , pp. 1605-1612
    • Tasse, L.1    Bercovici, J.2    Pizzut-Serin, S.3    Robe, P.4    Tap, J.5    Klopp, C.6
  • 81
    • 0024676534 scopus 로고
    • Non-secretion of blood group antigens and susceptibility to infection by Candida species
    • Thom, S. M., Blackwell, C. C., Maccallum, C. J., Weir, D. M., Brettle, R. P., Kinane, D. F., et al. (1989). Non-secretion of blood group antigens and susceptibility to infection by Candida species. FEMS Microbiol. Lett. 47, 401-405. doi: 10.1111/j.1574-6968.1989.tb02428.x
    • (1989) FEMS Microbiol. Lett. , vol.47 , pp. 401-405
    • Thom, S.M.1    Blackwell, C.C.2    Maccallum, C.J.3    Weir, D.M.4    Brettle, R.P.5    Kinane, D.F.6
  • 82
    • 0030418734 scopus 로고    scopus 로고
    • Biodiversity: population versus ecosystem stability
    • Tilman, D. (1996). Biodiversity: population versus ecosystem stability. Ecology 77, 350-363. doi: 10.2307/2265614
    • (1996) Ecology , vol.77 , pp. 350-363
    • Tilman, D.1
  • 83
    • 84908234204 scopus 로고    scopus 로고
    • Reprograming of gut microbiome energy metabolism by the FUT2 Crohn's disease risk polymorphism
    • Tong, M., Mchardy, I., Ruegger, P., Goudarzi, M., Kashyap, P. C., Haritunians, T., et al. (2014). Reprograming of gut microbiome energy metabolism by the FUT2 Crohn's disease risk polymorphism. ISME J. 8, 2193-2206. doi: 10.1038/ismej.2014.64
    • (2014) ISME J. , vol.8 , pp. 2193-2206
    • Tong, M.1    Mchardy, I.2    Ruegger, P.3    Goudarzi, M.4    Kashyap, P.C.5    Haritunians, T.6
  • 84
    • 76349092715 scopus 로고    scopus 로고
    • Convergent temporal dynamics of the human infant gut microbiota
    • Trosvik, P., Stenseth, N. C., and Rudi, K. (2010). Convergent temporal dynamics of the human infant gut microbiota. ISME J. 4, 151-158. doi: 10.1038/ismej.2009.96
    • (2010) ISME J. , vol.4 , pp. 151-158
    • Trosvik, P.1    Stenseth, N.C.2    Rudi, K.3
  • 85
    • 33845889108 scopus 로고    scopus 로고
    • Lactic acid bacteria (LAB) bind to Human B- or H-antigens expressed on intestinal mucosa
    • Uchida, H., Kawai, Y., Kinoshita, H., Kitazawa, H., Miura, K., Shiiba, K., et al. (2006). Lactic acid bacteria (LAB) bind to Human B- or H-antigens expressed on intestinal mucosa. Biosci. Biotechnol. Biochem. 70, 3073-3076. doi: 10.1271/bbb.60407
    • (2006) Biosci. Biotechnol. Biochem. , vol.70 , pp. 3073-3076
    • Uchida, H.1    Kawai, Y.2    Kinoshita, H.3    Kitazawa, H.4    Miura, K.5    Shiiba, K.6
  • 86
    • 34848819204 scopus 로고    scopus 로고
    • Facilitation can increase the phylogenetic diversity of plant communities
    • Valiente-Banuet, A., and Verdú, M. (2007). Facilitation can increase the phylogenetic diversity of plant communities. Ecol. Lett. 10, 1029-1036. doi: 10.1111/j.1461-0248.2007.01100.x
    • (2007) Ecol. Lett. , vol.10 , pp. 1029-1036
    • Valiente-Banuet, A.1    Verdú, M.2
  • 87
    • 26844487796 scopus 로고    scopus 로고
    • Efficient and simple generation of random simple connected graphs with prescribed degree sequence
    • ed. L. Wang (Berlin: Springer)
    • Viger, F., and Latapy, M. (2005). "Efficient and simple generation of random simple connected graphs with prescribed degree sequence," in Computing and Combinatorics, ed. L. Wang (Berlin: Springer), 440-449.
    • (2005) in Computing and Combinatorics , pp. 440-449
    • Viger, F.1    Latapy, M.2
  • 88
    • 79960417433 scopus 로고    scopus 로고
    • Phylogenetic limiting similarity and competitive exclusion
    • Violle, C., Nemergut, D. R., Pu, Z., and Jiang, L. (2011). Phylogenetic limiting similarity and competitive exclusion. Ecol. Lett. 14, 782-787. doi: 10.1111/j.1461-0248.2011.01644.x
    • (2011) Ecol. Lett. , vol.14 , pp. 782-787
    • Violle, C.1    Nemergut, D.R.2    Pu, Z.3    Jiang, L.4
  • 89
    • 79956257405 scopus 로고    scopus 로고
    • Secretor genotype FUT2 is strongly associated with the composition of bifidobacteria in the human intestine
    • Wacklin, P., Mäkivuokko, H., Alakulppi, N., Nikkilä, J., Tenkanen, H., Räbinä, J., et al. (2011). Secretor genotype FUT2 is strongly associated with the composition of bifidobacteria in the human intestine. PLoS ONE 6:e20113. doi: 10.1371/journal.pone.0020113
    • (2011) PLoS ONE , vol.6
    • Wacklin, P.1    Mäkivuokko, H.2    Alakulppi, N.3    Nikkilä, J.4    Tenkanen, H.5    Räbinä, J.6
  • 90
    • 84899648332 scopus 로고    scopus 로고
    • faecal microbiota composition in adults is associated with the FUT2 gene determining the secretor status
    • Wacklin, P., Tuimala, J., Nikkilä, J., Sebastian, T., Mäkivuokko, H., Alakulppi, N., et al. (2014). faecal microbiota composition in adults is associated with the FUT2 gene determining the secretor status. PLoS ONE 9:e94863. doi: 10.1371/journal.pone.0094863
    • (2014) PLoS ONE , vol.9
    • Wacklin, P.1    Tuimala, J.2    Nikkilä, J.3    Sebastian, T.4    Mäkivuokko, H.5    Alakulppi, N.6
  • 91
    • 22144439446 scopus 로고    scopus 로고
    • pH and peptide supply can radically alter bacterial populations and short-chain fatty acid ratios within microbial communities from the human colon
    • Walker, A. W., Duncan, S. H., Mcwilliam Leitch, E. C., Child, M. W., and Flint, H. J. (2005). pH and peptide supply can radically alter bacterial populations and short-chain fatty acid ratios within microbial communities from the human colon. Appl. Environ. Microbiol. 71, 3692-3700. doi: 10.1128/AEM.71.7.3692-3700.2005
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 3692-3700
    • Walker, A.W.1    Duncan, S.H.2    Mcwilliam Leitch, E.C.3    Child, M.W.4    Flint, H.J.5
  • 92
    • 84990998440 scopus 로고    scopus 로고
    • Genome-wide association analysis identifies variation in vitamin D receptor and other host factors influencing the gut microbiota
    • Wang, J., Thingholm, L. B., Skieceviciene, J., Rausch, P., Kummen, M., Hov, J. R., et al. (2016). Genome-wide association analysis identifies variation in vitamin D receptor and other host factors influencing the gut microbiota. Nat. Genet. 48, 1396-1406. doi: 10.1038/ng.3695
    • (2016) Nat. Genet. , vol.48 , pp. 1396-1406
    • Wang, J.1    Thingholm, L.B.2    Skieceviciene, J.3    Rausch, P.4    Kummen, M.5    Hov, J.R.6
  • 93
    • 34548293679 scopus 로고    scopus 로고
    • Naive bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • Wang, Q., Garrity, G. M., Tiedje, J. M., and Cole, J. R. (2007). Naive bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl. Environ. Microbiol. 73, 5261-5267. doi: 10.1128/AEM.00062-07
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 94
    • 0033929368 scopus 로고    scopus 로고
    • Exploring the phylogenetic structure of ecological communities: an example for rain forest trees
    • Webb, C. O. (2000). Exploring the phylogenetic structure of ecological communities: an example for rain forest trees. Am. Nat. 156, 145-155. doi: 10.1086/303378
    • (2000) Am. Nat. , vol.156 , pp. 145-155
    • Webb, C.O.1
  • 95
    • 84898763954 scopus 로고    scopus 로고
    • Selective proliferation of intestinal Barnesiella under fucosyllactose supplementation in mice
    • Weiss, G. A., Chassard, C., and Hennet, T. (2014). Selective proliferation of intestinal Barnesiella under fucosyllactose supplementation in mice. Br. J. Nutr. 111, 1602-1610. doi: 10.1017/S0007114513004200
    • (2014) Br. J. Nutr. , vol.111 , pp. 1602-1610
    • Weiss, G.A.1    Chassard, C.2    Hennet, T.3
  • 96
    • 84959106176 scopus 로고    scopus 로고
    • Correlation detection strategies in microbial data sets vary widely in sensitivity and precision
    • Weiss, S., Van Treuren, W., Lozupone, C., Faust, K., Friedman, J., Deng, Y., et al. (2016). Correlation detection strategies in microbial data sets vary widely in sensitivity and precision. ISME J. 10, 1669-1681. doi: 10.1038/ismej.2015.235
    • (2016) ISME J. , vol.10 , pp. 1669-1681
    • Weiss, S.1    Van Treuren, W.2    Lozupone, C.3    Faust, K.4    Friedman, J.5    Deng, Y.6
  • 97
  • 98
    • 0033574013 scopus 로고    scopus 로고
    • Biodiversity and ecosystem productivity in a fluctuating environment: the insurance hypothesis
    • Yachi, S., and Loreau, M. (1999). Biodiversity and ecosystem productivity in a fluctuating environment: the insurance hypothesis. Proc. Natl. Acad. Sci. U.S.A. 96, 1463-1468. doi: 10.1073/pnas.96.4.1463
    • (1999) Proc. Natl. Acad. Sci. U.S.A. , vol.96 , pp. 1463-1468
    • Yachi, S.1    Loreau, M.2
  • 99
    • 77955085506 scopus 로고    scopus 로고
    • Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relatives
    • Zaneveld, J. R., Lozupone, C., Gordon, J. I., and Knight, R. (2010). Ribosomal RNA diversity predicts genome diversity in gut bacteria and their relatives. Nucleic Acids Res. 38, 3869-3879. doi: 10.1093/nar/gkq066
    • (2010) Nucleic Acids Res. , vol.38 , pp. 3869-3879
    • Zaneveld, J.R.1    Lozupone, C.2    Gordon, J.I.3    Knight, R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.