-
1
-
-
84981173245
-
Cultivation of stable, reproducible microbial communities from different fecal donors using minibioreactor arrays (MBRAs)
-
PMCID: 4588258
-
Auchtung, J.M., Robinson, C.D., Britton, R.A., Cultivation of stable, reproducible microbial communities from different fecal donors using minibioreactor arrays (MBRAs). Microbiome, 3, 2015, 42 PMCID: 4588258.
-
(2015)
Microbiome
, vol.3
, pp. 42
-
-
Auchtung, J.M.1
Robinson, C.D.2
Britton, R.A.3
-
2
-
-
8144226856
-
The gut microbiota as an environmental factor that regulates fat storage
-
Bäckhed, F., Ding, H., Wang, T., Hooper, L.V., Koh, G.Y., Nagy, A., Gordon, J.I., The gut microbiota as an environmental factor that regulates fat storage. Proceedings of the National Academy of Sciences of the United States of America 101 (2004), 15718–15723.
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, pp. 15718-15723
-
-
Bäckhed, F.1
Ding, H.2
Wang, T.3
Hooper, L.V.4
Koh, G.Y.5
Nagy, A.6
Gordon, J.I.7
-
3
-
-
0038149465
-
Growth of platyfish (Platypoecilus maculatus) free from bacteria and other micro'organisms
-
Baker, J.A., Ferguson, M.S., TenBroeck, C., Growth of platyfish (Platypoecilus maculatus) free from bacteria and other micro'organisms. Experimental Biology and Medicine 51 (1942), 116–119.
-
(1942)
Experimental Biology and Medicine
, vol.51
, pp. 116-119
-
-
Baker, J.A.1
Ferguson, M.S.2
TenBroeck, C.3
-
4
-
-
36749024487
-
Intestinal alkaline phosphatase detoxifies lipopolysaccharide and prevents inflammation in zebrafish in response to the gut microbiota
-
PMCID: 2730374
-
Bates, J.M., Akerlund, J., Mittge, E., Guillemin, K., Intestinal alkaline phosphatase detoxifies lipopolysaccharide and prevents inflammation in zebrafish in response to the gut microbiota. Cell Host and Microbe 2 (2007), 371–382 PMCID: 2730374.
-
(2007)
Cell Host and Microbe
, vol.2
, pp. 371-382
-
-
Bates, J.M.1
Akerlund, J.2
Mittge, E.3
Guillemin, K.4
-
5
-
-
33748468927
-
Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation
-
Bates, J.M., Mittge, E., Kuhlman, J., Baden, K.N., Cheesman, S.E., Guillemin, K., Distinct signals from the microbiota promote different aspects of zebrafish gut differentiation. Developmental Biology 297 (2006), 374–386.
-
(2006)
Developmental Biology
, vol.297
, pp. 374-386
-
-
Bates, J.M.1
Mittge, E.2
Kuhlman, J.3
Baden, K.N.4
Cheesman, S.E.5
Guillemin, K.6
-
6
-
-
0345316417
-
Gnotobiotic maintenance of sheepshead minnow larvae
-
Battalora, M.S.J., Ellender, R.D., Martin, B.J., Gnotobiotic maintenance of sheepshead minnow larvae. The Progressive Fish-Culturist 47 (1985), 122–125.
-
(1985)
The Progressive Fish-Culturist
, vol.47
, pp. 122-125
-
-
Battalora, M.S.J.1
Ellender, R.D.2
Martin, B.J.3
-
7
-
-
70349108406
-
Intestinal microbiota regulate xenobiotic metabolism in the liver
-
PMCID: PMC2734986
-
Bjorkholm, B., Bok, C.M., Lundin, A., Rafter, J., Hibberd, M.L., Pettersson, S., Intestinal microbiota regulate xenobiotic metabolism in the liver. PLoS One, 4, 2009, e6958 PMCID: PMC2734986.
-
(2009)
PLoS One
, vol.4
, pp. e6958
-
-
Bjorkholm, B.1
Bok, C.M.2
Lundin, A.3
Rafter, J.4
Hibberd, M.L.5
Pettersson, S.6
-
8
-
-
84939864763
-
Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development
-
Burns, A.R., Stephens, W.Z., Stagaman, K., Wong, S., Rawls, J.F., Guillemin, K., Bohannan, B.J.M., Contribution of neutral processes to the assembly of gut microbial communities in the zebrafish over host development. The ISME Journal 10 (2016), 655–664.
-
(2016)
The ISME Journal
, vol.10
, pp. 655-664
-
-
Burns, A.R.1
Stephens, W.Z.2
Stagaman, K.3
Wong, S.4
Rawls, J.F.5
Guillemin, K.6
Bohannan, B.J.M.7
-
9
-
-
84859227418
-
Intronic cis-regulatory modules mediate tissue-specific and microbial control of angptl4/fiaf transcription
-
Camp, J.G., Jazwa, A.L., Trent, C.M., Rawls, J.F., Intronic cis-regulatory modules mediate tissue-specific and microbial control of angptl4/fiaf transcription. PLoS Genetics, 8, 2012, e1002585.
-
(2012)
PLoS Genetics
, vol.8
, pp. e1002585
-
-
Camp, J.G.1
Jazwa, A.L.2
Trent, C.M.3
Rawls, J.F.4
-
10
-
-
48249125862
-
Changes in gut microbiota control metabolic endotoxemia-induced inflammation in high-fat diet-induced obesity and diabetes in mice
-
Cani, P.D., Bibiloni, R., Knauf, C., Waget, A., Neyrinck, A.M., Delzenne, N.M., Burcelin, R., Changes in gut microbiota control metabolic endotoxemia-induced inflammation in high-fat diet-induced obesity and diabetes in mice. Diabetes 57 (2008), 1470–1481.
-
(2008)
Diabetes
, vol.57
, pp. 1470-1481
-
-
Cani, P.D.1
Bibiloni, R.2
Knauf, C.3
Waget, A.4
Neyrinck, A.M.5
Delzenne, N.M.6
Burcelin, R.7
-
11
-
-
79952765141
-
Epithelial cell proliferation in the developing zebrafish intestine is regulated by the Wnt pathway and microbial signaling via Myd88
-
PMCID: 3063593
-
Cheesman, S.E., Neal, J.T., Mittge, E., Seredick, B.M., Guillemin, K., Epithelial cell proliferation in the developing zebrafish intestine is regulated by the Wnt pathway and microbial signaling via Myd88. Proceedings of the National Academy of Sciences of the United States of America 108:Suppl 1 (2011), 4570–4577 PMCID: 3063593.
-
(2011)
Proceedings of the National Academy of Sciences of the United States of America
, vol.108
, pp. 4570-4577
-
-
Cheesman, S.E.1
Neal, J.T.2
Mittge, E.3
Seredick, B.M.4
Guillemin, K.5
-
12
-
-
34447275383
-
Experiences sur la vie sans microbes
-
Cohendy, M., Experiences sur la vie sans microbes. Annales de l'Institut Pasteur 26 (1912), 106–137.
-
(1912)
Annales de l'Institut Pasteur
, vol.26
, pp. 106-137
-
-
Cohendy, M.1
-
13
-
-
0032803862
-
Phylogeny of the defined murine microbiota: altered Schaedler flora
-
PMCID: 91493
-
Dewhirst, F.E., Chien, C.C., Paster, B.J., Ericson, R.L., Orcutt, R.P., Schauer, D.B., Fox, J.G., Phylogeny of the defined murine microbiota: altered Schaedler flora. Applied and Environmental Microbiology 65 (1999), 3287–3292 PMCID: 91493.
-
(1999)
Applied and Environmental Microbiology
, vol.65
, pp. 3287-3292
-
-
Dewhirst, F.E.1
Chien, C.C.2
Paster, B.J.3
Ericson, R.L.4
Orcutt, R.P.5
Schauer, D.B.6
Fox, J.G.7
-
14
-
-
58549096938
-
Development of a bacterial challenge test for gnotobiotic sea bass (Dicentrarchus labrax) larvae
-
Dierckens, K., Rekecki, A., Laureau, S., Sorgeloos, P., Boon, N., Van Den Broeck, W., Bossier, P., Development of a bacterial challenge test for gnotobiotic sea bass (Dicentrarchus labrax) larvae. Environmental Microbiology 11 (2009), 526–533.
-
(2009)
Environmental Microbiology
, vol.11
, pp. 526-533
-
-
Dierckens, K.1
Rekecki, A.2
Laureau, S.3
Sorgeloos, P.4
Boon, N.5
Van Den Broeck, W.6
Bossier, P.7
-
15
-
-
84857262365
-
Sur la germination dans un sol riche en matières organiques, mais exempt de microbes
-
Duclaux, M.E., Sur la germination dans un sol riche en matières organiques, mais exempt de microbes. Comptes Rendus de Académie des Sciences 100 (1885), 66–68.
-
(1885)
Comptes Rendus de Académie des Sciences
, vol.100
, pp. 66-68
-
-
Duclaux, M.E.1
-
16
-
-
36849063878
-
Zebrafish and motor control over the last decade
-
PMCID: 2237884
-
Fetcho, J.R., Higashijima, S., McLean, D.L., Zebrafish and motor control over the last decade. Brain Research Reviews 57 (2008), 86–93 PMCID: 2237884.
-
(2008)
Brain Research Reviews
, vol.57
, pp. 86-93
-
-
Fetcho, J.R.1
Higashijima, S.2
McLean, D.L.3
-
17
-
-
69449086580
-
Ontogeny and nutritional control of adipogenesis in zebrafish (Danio rerio)
-
Flynn, E.J., Trent, C.M., Rawls, J.F., Ontogeny and nutritional control of adipogenesis in zebrafish (Danio rerio). The Journal of Lipid Research 50 (2009), 1641–1652.
-
(2009)
The Journal of Lipid Research
, vol.50
, pp. 1641-1652
-
-
Flynn, E.J.1
Trent, C.M.2
Rawls, J.F.3
-
18
-
-
79955042875
-
A protocol and cultivation system for gnotobiotic Atlantic cod larvae (Gadus morhua L.) as a tool to study host microbe interactions
-
Forberg, T., Arukwe, A., Vadstein, O., A protocol and cultivation system for gnotobiotic Atlantic cod larvae (Gadus morhua L.) as a tool to study host microbe interactions. Aquaculture 315 (2011), 222–227.
-
(2011)
Aquaculture
, vol.315
, pp. 222-227
-
-
Forberg, T.1
Arukwe, A.2
Vadstein, O.3
-
19
-
-
34250591032
-
The germ-free animal. Its use in the study of “physiologic” effects of the normal microbial flora on the animal host
-
Gordon, H.A., The germ-free animal. Its use in the study of “physiologic” effects of the normal microbial flora on the animal host. The American Journal of Digestive Diseases 5 (1960), 841–867.
-
(1960)
The American Journal of Digestive Diseases
, vol.5
, pp. 841-867
-
-
Gordon, H.A.1
-
20
-
-
0036731971
-
Headwaters of the zebrafish – emergence of a new model vertebrate
-
Grunwald, D.J., Eisen, J.S., Headwaters of the zebrafish – emergence of a new model vertebrate. Nature Reviews. Genetics 3 (2002), 717–724.
-
(2002)
Nature Reviews. Genetics
, vol.3
, pp. 717-724
-
-
Grunwald, D.J.1
Eisen, J.S.2
-
21
-
-
84899456016
-
Mechanistic insight into digoxin inactivation by Eggerthella lenta augments our understanding of its pharmacokinetics
-
PMCID: PMC4063850
-
Haiser, H.J., Seim, K.L., Balskus, E.P., Turnbaugh, P.J., Mechanistic insight into digoxin inactivation by Eggerthella lenta augments our understanding of its pharmacokinetics. Gut Microbes 5 (2014), 233–238 PMCID: PMC4063850.
-
(2014)
Gut Microbes
, vol.5
, pp. 233-238
-
-
Haiser, H.J.1
Seim, K.L.2
Balskus, E.P.3
Turnbaugh, P.J.4
-
22
-
-
84978431877
-
The microbiota in adaptive immune homeostasis and disease
-
Honda, K., Littman, D.R., The microbiota in adaptive immune homeostasis and disease. Nature 535 (2016), 75–84.
-
(2016)
Nature
, vol.535
, pp. 75-84
-
-
Honda, K.1
Littman, D.R.2
-
23
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
PMCID: 3564958
-
Human Microbiome Project Consortium, Structure, function and diversity of the healthy human microbiome. Nature 486 (2012), 207–214 PMCID: 3564958.
-
(2012)
Nature
, vol.486
, pp. 207-214
-
-
Human Microbiome Project Consortium1
-
24
-
-
77958596056
-
White adipose tissue development in zebrafish is regulated by both developmental time and fish size
-
Imrie, D., Sadler, K.C., White adipose tissue development in zebrafish is regulated by both developmental time and fish size. Developmental Dynamics 239 (2010), 3013–3023.
-
(2010)
Developmental Dynamics
, vol.239
, pp. 3013-3023
-
-
Imrie, D.1
Sadler, K.C.2
-
25
-
-
84920983163
-
Spatial and temporal features of the growth of a bacterial species colonizing the zebrafish gut
-
Jemielita, M., Taormina, M.J., Burns, A.R., Hampton, J.S., Rolig, A.S., Guillemin, K., Parthasarathy, R., Spatial and temporal features of the growth of a bacterial species colonizing the zebrafish gut. mBio, 5, 2014.
-
(2014)
mBio
, vol.5
-
-
Jemielita, M.1
Taormina, M.J.2
Burns, A.R.3
Hampton, J.S.4
Rolig, A.S.5
Guillemin, K.6
Parthasarathy, R.7
-
26
-
-
84948956933
-
Host and symbiont jointly control gut microbiota during complete metamorphosis
-
Johnston, P.R., Rolff, J., Host and symbiont jointly control gut microbiota during complete metamorphosis. PLoS Pathogens, 11, 2015, e1005246.
-
(2015)
PLoS Pathogens
, vol.11
, pp. e1005246
-
-
Johnston, P.R.1
Rolff, J.2
-
27
-
-
84876267888
-
Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond
-
PMCID: 3629777
-
Kalueff, A.V., Gebhardt, M., Stewart, A.M., Cachat, J.M., Brimmer, M., Chawla, J.S., Zebrafish Neuroscience Research Consortium, Towards a comprehensive catalog of zebrafish behavior 1.0 and beyond. Zebrafish 10 (2013), 70–86 PMCID: 3629777.
-
(2013)
Zebrafish
, vol.10
, pp. 70-86
-
-
Kalueff, A.V.1
Gebhardt, M.2
Stewart, A.M.3
Cachat, J.M.4
Brimmer, M.5
Chawla, J.S.6
Zebrafish Neuroscience Research Consortium7
-
28
-
-
77249101479
-
Host–microbe interactions in the developing zebrafish
-
Kanther, M., Rawls, J.F., Host–microbe interactions in the developing zebrafish. Current Opinion in Immunology 22 (2010), 10–19.
-
(2010)
Current Opinion in Immunology
, vol.22
, pp. 10-19
-
-
Kanther, M.1
Rawls, J.F.2
-
29
-
-
79959929551
-
Microbial colonization induces dynamic temporal and spatial patterns of NF-kappaB activation in the zebrafish digestive tract
-
PMCID: 3164861
-
Kanther, M., Sun, X., Muhlbauer, M., Mackey, L.C., Flynn, E.J. 3rd, Bagnat, M., Jobin, C., Rawls, J.F., Microbial colonization induces dynamic temporal and spatial patterns of NF-kappaB activation in the zebrafish digestive tract. Gastroenterology 141 (2011), 197–207 PMCID: 3164861.
-
(2011)
Gastroenterology
, vol.141
, pp. 197-207
-
-
Kanther, M.1
Sun, X.2
Muhlbauer, M.3
Mackey, L.C.4
Flynn, E.J.5
Bagnat, M.6
Jobin, C.7
Rawls, J.F.8
-
30
-
-
0029045033
-
Stages of embryonic development of the zebrafish
-
PMID: 8589427
-
Kimmel, C.B., Ballard, W.W., Kimmel, S.R., Ullmann, B., Schilling, T.F., Stages of embryonic development of the zebrafish. Developmental Dynamics 203 (1995), 253–310 PMID: 8589427.
-
(1995)
Developmental Dynamics
, vol.203
, pp. 253-310
-
-
Kimmel, C.B.1
Ballard, W.W.2
Kimmel, S.R.3
Ullmann, B.4
Schilling, T.F.5
-
31
-
-
84887776351
-
Restructuring of the amphibian gut microbiota through metamorphosis
-
Kohl, K.D., Cary, T.L., Karasov, W.H., Dearing, M.D., Restructuring of the amphibian gut microbiota through metamorphosis. Environmental Microbiology Reports 5 (2013), 899–903.
-
(2013)
Environmental Microbiology Reports
, vol.5
, pp. 899-903
-
-
Kohl, K.D.1
Cary, T.L.2
Karasov, W.H.3
Dearing, M.D.4
-
32
-
-
84940560765
-
Pathways and functions of gut microbiota metabolism impacting host physiology
-
PMCID: 4688195
-
Krishnan, S., Alden, N., Lee, K., Pathways and functions of gut microbiota metabolism impacting host physiology. Current Opinion in Biotechnology 36 (2015), 137–145 PMCID: 4688195.
-
(2015)
Current Opinion in Biotechnology
, vol.36
, pp. 137-145
-
-
Krishnan, S.1
Alden, N.2
Lee, K.3
-
33
-
-
85020671333
-
Die Gewinnung, Haltung und Aufzucht keimfreier Tiere und ihre Bedeutung für die Erforschung natürlicher Lebensvorgänge
-
Springer-Verlag
-
Küster, F., Die Gewinnung, Haltung und Aufzucht keimfreier Tiere und ihre Bedeutung für die Erforschung natürlicher Lebensvorgänge. 2013, Springer-Verlag.
-
(2013)
-
-
Küster, F.1
-
34
-
-
0041694469
-
Development and maturation of the immune system in zebrafish, Danio rerio: a gene expression profiling, in situ hybridization and immunological study
-
Lam, S.H., Chua, H.L., Gong, Z., Lam, T.J., Sin, Y.M., Development and maturation of the immune system in zebrafish, Danio rerio: a gene expression profiling, in situ hybridization and immunological study. Developmental and Comparative Immunology 28 (2004), 9–28.
-
(2004)
Developmental and Comparative Immunology
, vol.28
, pp. 9-28
-
-
Lam, S.H.1
Chua, H.L.2
Gong, Z.3
Lam, T.J.4
Sin, Y.M.5
-
35
-
-
2442599273
-
In vivo tracking of T cell development, ablation, and engraftment in transgenic zebrafish
-
Langenau, D.M., Ferrando, A.A., Traver, D., Kutok, J.L., Hezel, J.P.D., Kanki, J.P., Trede, N.S., In vivo tracking of T cell development, ablation, and engraftment in transgenic zebrafish. Proceedings of the National Academy of Sciences 101 (2004), 7369–7374.
-
(2004)
Proceedings of the National Academy of Sciences
, vol.101
, pp. 7369-7374
-
-
Langenau, D.M.1
Ferrando, A.A.2
Traver, D.3
Kutok, J.L.4
Hezel, J.P.D.5
Kanki, J.P.6
Trede, N.S.7
-
36
-
-
84961999746
-
Heterogeneity of the gut microbiome in mice: guidelines for optimizing experimental design
-
PMCID: 4703068
-
Laukens, D., Brinkman, B.M., Raes, J., De Vos, M., Vandenabeele, P., Heterogeneity of the gut microbiome in mice: guidelines for optimizing experimental design. FEMS Microbiology Reviews 40 (2016), 117–132 PMCID: 4703068.
-
(2016)
FEMS Microbiology Reviews
, vol.40
, pp. 117-132
-
-
Laukens, D.1
Brinkman, B.M.2
Raes, J.3
De Vos, M.4
Vandenabeele, P.5
-
37
-
-
34447314159
-
The husbandry of zebrafish (Danio rerio): a review
-
Lawrence, C., The husbandry of zebrafish (Danio rerio): a review. Aquaculture 269 (2007), 1–20.
-
(2007)
Aquaculture
, vol.269
, pp. 1-20
-
-
Lawrence, C.1
-
38
-
-
1842592146
-
Obtention d'alevins non vésiculés axéniques de salmonides
-
Lesel, R., Lesel, M., Obtention d'alevins non vésiculés axéniques de salmonides. Annales d'Hydrobiologie 7 (1976), 21–25.
-
(1976)
Annales d'Hydrobiologie
, vol.7
, pp. 21-25
-
-
Lesel, R.1
Lesel, M.2
-
39
-
-
84988046757
-
Obtention de poissons ovovivipares axénique; amélioration technique
-
Lesel, R.D.P., Obtention de poissons ovovivipares axénique; amélioration technique. Annales de Zoologie Ecologie Aminale 11 (1979), 389–395.
-
(1979)
Annales de Zoologie Ecologie Aminale
, vol.11
, pp. 389-395
-
-
Lesel, R.D.P.1
-
40
-
-
84928881439
-
Standardised animal models of host microbial mutualism
-
PMCID: 4424382
-
Macpherson, A.J., McCoy, K.D., Standardised animal models of host microbial mutualism. Mucosal Immunology 8 (2015), 476–486 PMCID: 4424382.
-
(2015)
Mucosal Immunology
, vol.8
, pp. 476-486
-
-
Macpherson, A.J.1
McCoy, K.D.2
-
41
-
-
84977155373
-
Strategies to mitigate a Mycobacterium marinum outbreak in a zebrafish research facility
-
PMCID: 4931754
-
Mason, T., Snell, K., Mittge, E., Melancon, E., Montgomery, R., McFadden, M., Peirce, J., Strategies to mitigate a Mycobacterium marinum outbreak in a zebrafish research facility. Zebrafish 13:Suppl 1 (2016), S77–S87 PMCID: 4931754.
-
(2016)
Zebrafish
, vol.13
, pp. S77-S87
-
-
Mason, T.1
Snell, K.2
Mittge, E.3
Melancon, E.4
Montgomery, R.5
McFadden, M.6
Peirce, J.7
-
42
-
-
84874479799
-
Animals in a bacterial world, a new imperative for the life sciences
-
PMCID: 3587249
-
McFall-Ngai, M., Hadfield, M.G., Bosch, T.C., Carey, H.V., Domazet-Loso, T., Douglas, A.E., Wernegreen, J.J., Animals in a bacterial world, a new imperative for the life sciences. Proceedings of the National Academy of Sciences of the United States of America 110 (2013), 3229–3236 PMCID: 3587249.
-
(2013)
Proceedings of the National Academy of Sciences of the United States of America
, vol.110
, pp. 3229-3236
-
-
McFall-Ngai, M.1
Hadfield, M.G.2
Bosch, T.C.3
Carey, H.V.4
Domazet-Loso, T.5
Douglas, A.E.6
Wernegreen, J.J.7
-
44
-
-
80053214377
-
Study of host-microbe interactions in zebrafish
-
Milligan-Myhre, K., Charette, J.R., Phennicie, R.T., Stephens, W.Z., Rawls, J.F., Guillemin, K., Kim, C.H., Study of host-microbe interactions in zebrafish. Methods in Cell Biology 105 (2011), 87–116.
-
(2011)
Methods in Cell Biology
, vol.105
, pp. 87-116
-
-
Milligan-Myhre, K.1
Charette, J.R.2
Phennicie, R.T.3
Stephens, W.Z.4
Rawls, J.F.5
Guillemin, K.6
Kim, C.H.7
-
45
-
-
84957963945
-
Innate immune responses to gut microbiota differ between oceanic and freshwater threespine stickleback populations
-
PMCID: PMC4770144
-
Milligan-Myhre, K., Small, C.M., Mittge, E.K., Agarwal, M., Currey, M., Cresko, W.A., Guillemin, K., Innate immune responses to gut microbiota differ between oceanic and freshwater threespine stickleback populations. Disease Models and Mechanisms 9 (2016), 187–198 PMCID: PMC4770144.
-
(2016)
Disease Models and Mechanisms
, vol.9
, pp. 187-198
-
-
Milligan-Myhre, K.1
Small, C.M.2
Mittge, E.K.3
Agarwal, M.4
Currey, M.5
Cresko, W.A.6
Guillemin, K.7
-
46
-
-
84929493842
-
Plexin D1 determines body fat distribution by regulating the type V collagen microenvironment in visceral adipose tissue
-
PMCID: PMC4394244
-
Minchin, J.E., Dahlman, I., Harvey, C.J., Mejhert, N., Singh, M.K., Epstein, J.A., Rawls, J.F., Plexin D1 determines body fat distribution by regulating the type V collagen microenvironment in visceral adipose tissue. Proceedings of the National Academy of Sciences of the United States of America 112 (2015), 4363–4368 PMCID: PMC4394244.
-
(2015)
Proceedings of the National Academy of Sciences of the United States of America
, vol.112
, pp. 4363-4368
-
-
Minchin, J.E.1
Dahlman, I.2
Harvey, C.J.3
Mejhert, N.4
Singh, M.K.5
Epstein, J.A.6
Rawls, J.F.7
-
47
-
-
0028973376
-
Comparison of the growth and survival of larval turbot in the absence of culturable bacteria with those in the presence of Vibrio anguillarum, Vibrio alginolyticus, or a marine Aeromonas sp
-
Munro, P.D., Barbour, A., Birkbeck, T.H., Comparison of the growth and survival of larval turbot in the absence of culturable bacteria with those in the presence of Vibrio anguillarum, Vibrio alginolyticus, or a marine Aeromonas sp. Applied and Environmental Microbiology 61 (1995), 4425–4428.
-
(1995)
Applied and Environmental Microbiology
, vol.61
, pp. 4425-4428
-
-
Munro, P.D.1
Barbour, A.2
Birkbeck, T.H.3
-
49
-
-
84886866577
-
An evolutionarily conserved program of B-cell development and activation in zebrafish
-
Page, D.M., Wittamer, V., Bertrand, J.Y., Lewis, K.L., Pratt, D.N., Delgado, N., Traver, D., An evolutionarily conserved program of B-cell development and activation in zebrafish. Blood 122 (2013), e1–11.
-
(2013)
Blood
, vol.122
, pp. e1-11
-
-
Page, D.M.1
Wittamer, V.2
Bertrand, J.Y.3
Lewis, K.L.4
Pratt, D.N.5
Delgado, N.6
Traver, D.7
-
50
-
-
57649222183
-
The history of a developmental stage: metamorphosis in chordates
-
Paris, M., Laudet, V., The history of a developmental stage: metamorphosis in chordates. Genesis 46 (2008), 657–672.
-
(2008)
Genesis
, vol.46
, pp. 657-672
-
-
Paris, M.1
Laudet, V.2
-
51
-
-
0344657241
-
Observations relatives à la note précédente de M
-
Pasteur, L., Observations relatives à la note précédente de M. Comptes Rendus Des Seances De L'Academie Des Sciences, 100, 1885, 68 http://visualiseur.bnf.fr/Visualiseur?Destination=Gallica&O=NUMM-3056.
-
(1885)
Comptes Rendus Des Seances De L'Academie Des Sciences
, vol.100
, pp. 68
-
-
Pasteur, L.1
-
52
-
-
58749116111
-
Methods for generating and colonizing gnotobiotic zebrafish
-
Pham, L.N., Kanther, M., Semova, I., Rawls, J.F., Methods for generating and colonizing gnotobiotic zebrafish. Nature Protocols 3 (2008), 1862–1875.
-
(2008)
Nature Protocols
, vol.3
, pp. 1862-1875
-
-
Pham, L.N.1
Kanther, M.2
Semova, I.3
Rawls, J.F.4
-
53
-
-
34250633227
-
In vivo imaging and genetic analysis link bacterial motility and symbiosis in the zebrafish gut
-
PMCID: 1855277
-
Rawls, J.F., Mahowald, M.A., Goodman, A.L., Trent, C.M., Gordon, J.I., In vivo imaging and genetic analysis link bacterial motility and symbiosis in the zebrafish gut. Proceedings of the National Academy of Sciences of the United States of America 104 (2007), 7622–7627 PMCID: 1855277.
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, pp. 7622-7627
-
-
Rawls, J.F.1
Mahowald, M.A.2
Goodman, A.L.3
Trent, C.M.4
Gordon, J.I.5
-
54
-
-
33749997498
-
Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection
-
Rawls, J.F., Mahowald, M.A., Ley, R.E., Gordon, J.I., Reciprocal gut microbiota transplants from zebrafish and mice to germ-free recipients reveal host habitat selection. Cell 127 (2006), 423–433.
-
(2006)
Cell
, vol.127
, pp. 423-433
-
-
Rawls, J.F.1
Mahowald, M.A.2
Ley, R.E.3
Gordon, J.I.4
-
55
-
-
1842532897
-
Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota
-
PMCID: PMC384792
-
Rawls, J.F., Samuel, B.S., Gordon, J.I., Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota. Proceedings of the National Academy of Sciences of the United States of America 101 (2004), 4596–4601 PMCID: PMC384792.
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, pp. 4596-4601
-
-
Rawls, J.F.1
Samuel, B.S.2
Gordon, J.I.3
-
56
-
-
84864586135
-
A new zebrafish model of oro-intestinal pathogen colonization reveals a key role for adhesion in protection by probiotic bacteria
-
PMCID: 3406073
-
Rendueles, O., Ferrieres, L., Fretaud, M., Begaud, E., Herbomel, P., Levraud, J.P., Ghigo, J.M., A new zebrafish model of oro-intestinal pathogen colonization reveals a key role for adhesion in protection by probiotic bacteria. PLoS Pathogens, 8, 2012, e1002815 PMCID: 3406073.
-
(2012)
PLoS Pathogens
, vol.8
, pp. e1002815
-
-
Rendueles, O.1
Ferrieres, L.2
Fretaud, M.3
Begaud, E.4
Herbomel, P.5
Levraud, J.P.6
Ghigo, J.M.7
-
57
-
-
84855870166
-
A model 450 million years in the making: zebrafish and vertebrate immunity
-
Renshaw, S.A., Trede, N.S., A model 450 million years in the making: zebrafish and vertebrate immunity. Disease Models and Mechanisms 5 (2012), 38–47.
-
(2012)
Disease Models and Mechanisms
, vol.5
, pp. 38-47
-
-
Renshaw, S.A.1
Trede, N.S.2
-
58
-
-
84857286231
-
The need for a unified terminology in germfree life studies
-
Reyniers, J., Trexler, P., Ervin, R., Wagner, M., Luckey, T., Gordon, H., The need for a unified terminology in germfree life studies. Lobund Reports 2 (1949), 151–162.
-
(1949)
Lobund Reports
, vol.2
, pp. 151-162
-
-
Reyniers, J.1
Trexler, P.2
Ervin, R.3
Wagner, M.4
Luckey, T.5
Gordon, H.6
-
60
-
-
84883478660
-
Gut microbiota from twins discordant for obesity modulate metabolism in mice
-
Ridaura, V.K., Faith, J.J., Rey, F.E., Cheng, J., Duncan, A.E., Kau, A.L., Gordon, J.I., Gut microbiota from twins discordant for obesity modulate metabolism in mice. Science (New York, N.Y.), 341, 2013, 1241214.
-
(2013)
Science (New York, N.Y.)
, vol.341
, pp. 1241214
-
-
Ridaura, V.K.1
Faith, J.J.2
Rey, F.E.3
Cheng, J.4
Duncan, A.E.5
Kau, A.L.6
Gordon, J.I.7
-
61
-
-
84947429955
-
Individual members of the microbiota disproportionately modulate host innate immune responses
-
Rolig, A.S., Parthasarathy, R., Burns, A.R., Bohannan, B.J., Guillemin, K., Individual members of the microbiota disproportionately modulate host innate immune responses. Cell Host and Microbe 18 (2015), 613–620.
-
(2015)
Cell Host and Microbe
, vol.18
, pp. 613-620
-
-
Rolig, A.S.1
Parthasarathy, R.2
Burns, A.R.3
Bohannan, B.J.4
Guillemin, K.5
-
62
-
-
0020527551
-
Digoxin-inactivating bacteria: identification in human gut flora
-
Saha, J.R., Butler, V.P. Jr., Neu, H.C., Lindenbaum, J., Digoxin-inactivating bacteria: identification in human gut flora. Science 220 (1983), 325–327.
-
(1983)
Science
, vol.220
, pp. 325-327
-
-
Saha, J.R.1
Butler, V.P.2
Neu, H.C.3
Lindenbaum, J.4
-
64
-
-
84866404780
-
Microbiota regulate intestinal absorption and metabolism of fatty acids in the zebrafish
-
PMCID: 3517662
-
Semova, I., Carten, J.D., Stombaugh, J., Mackey, L.C., Knight, R., Farber, S.A., Rawls, J.F., Microbiota regulate intestinal absorption and metabolism of fatty acids in the zebrafish. Cell Host and Microbe 12 (2012), 277–288 PMCID: 3517662.
-
(2012)
Cell Host and Microbe
, vol.12
, pp. 277-288
-
-
Semova, I.1
Carten, J.D.2
Stombaugh, J.3
Mackey, L.C.4
Knight, R.5
Farber, S.A.6
Rawls, J.F.7
-
65
-
-
37049227293
-
Potentially simple technique for rearing “germ-free” fish
-
Shaw, E., Potentially simple technique for rearing “germ-free” fish. Science 125 (1957), 987–988.
-
(1957)
Science
, vol.125
, pp. 987-988
-
-
Shaw, E.1
-
66
-
-
34347380896
-
Creation of a genetic model of obesity in a teleost
-
Song, Y., Cone, R.D., Creation of a genetic model of obesity in a teleost. The FASEB Journal 21 (2007), 2042–2049.
-
(2007)
The FASEB Journal
, vol.21
, pp. 2042-2049
-
-
Song, Y.1
Cone, R.D.2
-
67
-
-
84973663855
-
Accounting for reciprocal host-microbiome interactions in experimental science
-
Stappenbeck, T.S., Virgin, H.W., Accounting for reciprocal host-microbiome interactions in experimental science. Nature 534 (2016), 191–199.
-
(2016)
Nature
, vol.534
, pp. 191-199
-
-
Stappenbeck, T.S.1
Virgin, H.W.2
-
68
-
-
84952802045
-
Identification of population bottlenecks and colonization factors during assembly of bacterial communities within the zebrafish intestine
-
Stephens, W.Z., Wiles, T.J., Martinez, E.S., Jemielita, M., Burns, A.R., Parthasarathy, R., Guillemin, K., Identification of population bottlenecks and colonization factors during assembly of bacterial communities within the zebrafish intestine. mBio, 6, 2015.
-
(2015)
mBio
, vol.6
-
-
Stephens, W.Z.1
Wiles, T.J.2
Martinez, E.S.3
Jemielita, M.4
Burns, A.R.5
Parthasarathy, R.6
Guillemin, K.7
-
69
-
-
84940733168
-
The composition of the zebrafish intestinal microbial community varies across development
-
Stephens, Z.W., Burns, A.R., Stagaman, K., Wong, S., Rawls, J.F., Guillemin, K., Bohannan, B.J.M., The composition of the zebrafish intestinal microbial community varies across development. The ISME Journal 10 (2016), 644–654.
-
(2016)
The ISME Journal
, vol.10
, pp. 644-654
-
-
Stephens, Z.W.1
Burns, A.R.2
Stagaman, K.3
Wong, S.4
Rawls, J.F.5
Guillemin, K.6
Bohannan, B.J.M.7
-
70
-
-
84899909435
-
Zebrafish models for translational neuroscience research: from tank to bedside
-
PMCID: 4039217
-
Stewart, A.M., Braubach, O., Spitsbergen, J., Gerlai, R., Kalueff, A.V., Zebrafish models for translational neuroscience research: from tank to bedside. Trends in Neurosciences 37 (2014), 264–278 PMCID: 4039217.
-
(2014)
Trends in Neurosciences
, vol.37
, pp. 264-278
-
-
Stewart, A.M.1
Braubach, O.2
Spitsbergen, J.3
Gerlai, R.4
Kalueff, A.V.5
-
71
-
-
33750439462
-
Mycobacterium marinum infection of adult zebrafish causes caseating granulomatous tuberculosis and is moderated by adaptive immunity
-
PMCID: 1695491
-
Swaim, L.E., Connolly, L.E., Volkman, H.E., Humbert, O., Born, D.E., Ramakrishnan, L., Mycobacterium marinum infection of adult zebrafish causes caseating granulomatous tuberculosis and is moderated by adaptive immunity. Infection and Immunity 74 (2006), 6108–6117 PMCID: 1695491.
-
(2006)
Infection and Immunity
, vol.74
, pp. 6108-6117
-
-
Swaim, L.E.1
Connolly, L.E.2
Volkman, H.E.3
Humbert, O.4
Born, D.E.5
Ramakrishnan, L.6
-
72
-
-
84866348016
-
Investigating bacterial-animal symbioses with light sheet microscopy
-
Taormina, M.J., Jemielita, M., Stephens, W.Z., Burns, A.R., Troll, J.V., Parthasarathy, R., Guillemin, K., Investigating bacterial-animal symbioses with light sheet microscopy. The Biological Bulletin 223 (2012), 7–20.
-
(2012)
The Biological Bulletin
, vol.223
, pp. 7-20
-
-
Taormina, M.J.1
Jemielita, M.2
Stephens, W.Z.3
Burns, A.R.4
Troll, J.V.5
Parthasarathy, R.6
Guillemin, K.7
-
73
-
-
84868616215
-
Changes in the gut microbiome of the sea lamprey during metamorphosis
-
Tetlock, A., Yost, C.K., Stavrinides, J., Manzon, R.G., Changes in the gut microbiome of the sea lamprey during metamorphosis. Applied and Environmental Microbiology 78 (2012), 7638–7644.
-
(2012)
Applied and Environmental Microbiology
, vol.78
, pp. 7638-7644
-
-
Tetlock, A.1
Yost, C.K.2
Stavrinides, J.3
Manzon, R.G.4
-
74
-
-
80051822330
-
Zebrafish obesogenic test: a tool for screening molecules that target adiposity
-
Tingaud-Sequeira, A., Ouadah, N., Babin, P.J., Zebrafish obesogenic test: a tool for screening molecules that target adiposity. Journal of Lipid Research 52 (2011), 1765–1772.
-
(2011)
Journal of Lipid Research
, vol.52
, pp. 1765-1772
-
-
Tingaud-Sequeira, A.1
Ouadah, N.2
Babin, P.J.3
-
75
-
-
0016271293
-
Sterility of salmonid roe and practicality of hatching gnotobiotic salmonid fish
-
PMCID: PMC186721
-
Trust, T.J., Sterility of salmonid roe and practicality of hatching gnotobiotic salmonid fish. Applied Microbiology 28 (1974), 340–341 PMCID: PMC186721.
-
(1974)
Applied Microbiology
, vol.28
, pp. 340-341
-
-
Trust, T.J.1
-
76
-
-
84877792376
-
Functional analysis of a zebrafish myd88 mutant identifies key transcriptional components of the innate immune system
-
van der Vaart, M., van Soest, J.J., Spaink, H.P., Meijer, A.H., Functional analysis of a zebrafish myd88 mutant identifies key transcriptional components of the innate immune system. Disease Models and Mechanisms 6 (2013), 841–854.
-
(2013)
Disease Models and Mechanisms
, vol.6
, pp. 841-854
-
-
van der Vaart, M.1
van Soest, J.J.2
Spaink, H.P.3
Meijer, A.H.4
-
77
-
-
0142070908
-
Bacterial influences on Atlantic halibut Hippoglossus hippoglossus yolk sac larval survival and start feed response
-
Verner-Jeffreys, D.W., Shields, R.J., Birkbeck, T.H., Bacterial influences on Atlantic halibut Hippoglossus hippoglossus yolk sac larval survival and start feed response. Diseases of Aquatic Organisms 56 (2003), 105–113.
-
(2003)
Diseases of Aquatic Organisms
, vol.56
, pp. 105-113
-
-
Verner-Jeffreys, D.W.1
Shields, R.J.2
Birkbeck, T.H.3
-
78
-
-
84873449894
-
Fundamental approaches to the study of zebrafish nutrition
-
Watts, S.A., Powell, M., D'Abramo, L.R., Fundamental approaches to the study of zebrafish nutrition. ILAR Journal / National Research Council, Institute of Laboratory Animal Resources 53 (2012), 144–160.
-
(2012)
ILAR Journal / National Research Council, Institute of Laboratory Animal Resources
, vol.53
, pp. 144-160
-
-
Watts, S.A.1
Powell, M.2
D'Abramo, L.R.3
-
79
-
-
84982786965
-
Host gut motility promotes competitive exclusion within a model intestinal microbiota
-
PMCID: 4961409
-
Wiles, T.J., Jemielita, M., Baker, R.P., Schlomann, B.H., Logan, S.L., Ganz, J., Parthasarathy, R., Host gut motility promotes competitive exclusion within a model intestinal microbiota. PLoS Biology, 14, 2016, e1002517 PMCID: 4961409.
-
(2016)
PLoS Biology
, vol.14
, pp. e1002517
-
-
Wiles, T.J.1
Jemielita, M.2
Baker, R.P.3
Schlomann, B.H.4
Logan, S.L.5
Ganz, J.6
Parthasarathy, R.7
-
80
-
-
84946607136
-
Ontogenetic differences in dietary fat influence microbiota assembly in the zebrafish gut
-
Wong, S., Stephens, W.Z., Burns, A.R., Stagaman, K., David, L.A., Bohannan, B.J.M., Rawls, J.F., Ontogenetic differences in dietary fat influence microbiota assembly in the zebrafish gut. mBio 6 (2015), e00687–e00715.
-
(2015)
mBio
, vol.6
, pp. e00687-e00715
-
-
Wong, S.1
Stephens, W.Z.2
Burns, A.R.3
Stagaman, K.4
David, L.A.5
Bohannan, B.J.M.6
Rawls, J.F.7
-
81
-
-
84874048883
-
Melamine-induced renal toxicity is mediated by the gut microbiota
-
Zheng, X., Zhao, A., Xie, G., Chi, Y., Zhao, L., Li, H., Luther, M., Melamine-induced renal toxicity is mediated by the gut microbiota. Science Translational Medicine, 5(172), 2013, 172ra22.
-
(2013)
Science Translational Medicine
, vol.5
, Issue.172
, pp. 172ra22
-
-
Zheng, X.1
Zhao, A.2
Xie, G.3
Chi, Y.4
Zhao, L.5
Li, H.6
Luther, M.7
|