Detrimental impact of microbiota-accessible carbohydrate-deprived diet on gut and immune homeostasis: An overview

Frontiers in Immunology

Volumn 8, Issue MAY, 2017, Pages

  Daïen, Claire Immediato ^a,b   Pinget, Gabriela Veronica ^a   Tan, Jian Kai ^c   Macia, Laurence ^a,c  

^a UNIVERSITY OF SYDNEY   (Australia)

^b INSTITUT DE GÉNÉTIQUE MOLÉCULAIRE DE MONTPELLIER   (France)

^c MONASH UNIVERSITY   (Australia)

Author keywords

Dietary fiber; Epithelium; Gut barrier; Gut homeostasis; Gut microbiota; Immunity; Microbiota accessible carbohydrates

Indexed keywords

CRYOPYRIN; IMMUNOGLOBULIN A; IMMUNOGLOBULIN G; INTERLEUKIN 18; SHORT CHAIN FATTY ACID; THYMIC STROMAL LYMPHOPOIETIN;

ALLERGY; AUTOIMMUNE DISEASE; B LYMPHOCYTE; BACTERIUM; DENDRITIC CELL; DIET; DIETARY FIBER; DISEASE COURSE; HOMEOSTASIS; HUMAN; IMMUNITY; INFECTION; INTESTINE; INTESTINE EPITHELIUM; INTESTINE FLORA; MICROBIAL DIVERSITY; MICROBIOTA ACCESSIBLE CARBOHYDRATE DEPRIVED DIET; MUCUS; NEUTROPHIL; NONHUMAN; PROTEIN EXPRESSION; SHORT SURVEY; T LYMPHOCYTE; TH1 CELL; TH17 CELL; TH2 CELL; TRANSEPITHELIAL RESISTANCE; WESTERN DIET;

EID: 85020036150     PISSN: None     EISSN: 16643224     Source Type: Journal    
DOI: 10.3389/fimmu.2017.00548     Document Type: Short Survey

References (52)

1. Aberg N, Hesselmar B, Aberg B, Eriksson B. Increase of asthma, allergic rhinitis and eczema in Swedish schoolchildren between 1979 and 1991. Clin Exp Allergy (1995) 25:815-9. doi: 10.1111/j.1365-2222.1995.tb00023.x
2. Poser S, Stickel B, Krtsch U, Burckhardt D, Nordman B. Increasing incidence of multiple sclerosis in South Lower Saxony, Germany. Neuroepidemiology (1989) 8:207-13. doi:10.1159/000110184
3. Farrokhyar F, Swarbrick ET, Irvine EJ. A critical review of epidemiological studies in inflammatory bowel disease. Scand J Gastroenterol (2001) 36:2-15. doi:10.1080/00365520150218002
4. Macia L, Tan J, Vieira AT, Leach K, Stanley D, Luong S, et al. Metabolite-sensing receptors GPR43 and GPR109A facilitate dietary fibre-induced gut homeostasis through regulation of the inflammasome. Nat Commun (2015) 6:6734. doi:10.1038/ncomms7734
5. Thorburn AN, McKenzie CI, Shen S, Stanley D, Macia L, Mason LJ, et al. Evidence that asthma is a developmental origin disease influenced by maternal diet and bacterial metabolites. Nat Commun (2015) 6:7320. doi:10.1038/ncomms8320
6. Popkin BM, Adair LS, Ng SW. Global nutrition transition and the pandemic of obesity in developing countries. Nutr Rev (2012) 70:3-21. doi:10.1111/j.1753-4887.2011.00456.x
7. Cordain L, Eaton SB, Sebastian A, Mann N, Lindeberg S, Watkins BA, et al. Origins and evolution of the Western diet: health implications for the 21st century. Am J Clin Nutr (2005) 81:341-54
8. Macia L, Thorburn AN, Binge LC, Marino E, Rogers KE, Maslowski KM, et al. Microbial influences on epithelial integrity and immune function as a basis for inflammatory diseases. Immunol Rev (2012) 245:164-76. doi:10.1111/j.1600-065X.2011.01080.x
9. Tan J, McKenzie C, Potamitis M, Thorburn AN, Mackay CR, Macia L. The role of short-chain fatty acids in health and disease. Adv Immunol (2014) 121:91-119. doi:10.1016/B978-0-12-800100-4.00003-9
10. El Kaoutari A, Armougom F, Gordon JI, Raoult D, Henrissat B. The abundance and variety of carbohydrate-active enzymes in the human gut microbiota. Nat Rev Microbiol (2013) 11:497-504. doi:10.1038/nrmicro3050
11. Sonnenburg ED, Sonnenburg JL. Starving our microbial self: the deleterious consequences of a diet deficient in microbiota-accessible carbohydrates. Cell Metab (2014) 20:779-86. doi:10.1016/j.cmet.2014.07.003
12. Park Y, Subar AF, Hollenbeck A, Schatzkin A. Dietary fiber intake and mortality in the NIH-AARP diet and health study. Arch Intern Med (2011) 171:1061-8. doi:10.1001/archinternmed.2011.18
13. Preston D, Morales M, Plunk A. The relationship between asthma and food deserts in the hampton roads area. Ann Allergy Asthma Immunol (2016) 117(5):S8. doi:10.1016/j.anai.2016.09.382
14. De Filippo C, Cavalieri D, Di Paola M, Ramazzotti M, Poullet JB, Massart S, et al. Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa. Proc Natl Acad Sci U S A (2010) 107:14691-6. doi:10.1073/pnas.1005963107
15. Schnorr SL, Candela M, Rampelli S, Centanni M, Consolandi C, Basaglia G, et al. Gut microbiome of the Hadza hunter-gatherers. Nat Commun (2014) 5:3654. doi:10.1038/ncomms4654
16. Yatsunenko T, Rey FE, Manary MJ, Trehan I, Dominguez-Bello MG, Contreras M, et al. Human gut microbiome viewed across age and geography. Nature (2012) 486:222-7. doi:10.1038/nature11053
17. Abrahamsson TR, Jakobsson HE, Andersson AF, Björkstén B, Engstrand L, Jenmalm MC. Low gut microbiota diversity in early infancy precedes asthma at school age. Clin Exp Allergy (2014) 44:842-50. doi:10.1111/cea.12253
18. Matsuoka K, Kanai T. The gut microbiota and inflammatory bowel disease. Semin Immunopathol (2015) 37:47-55. doi:10.1007/s00281-014-0454-4
19. Turnbaugh PJ, Hamady M, Yatsunenko T, Cantarel BL, Duncan A, Ley RE, et al. A core gut microbiome in obese and lean twins. Nature (2009) 457:480-4. doi:10.1038/nature07540
20. Zhang X, Zhang D, Jia H, Feng Q, Wang D, Liang D, et al. The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment. Nat Med (2015) 21:895-905. doi:10.1038/nm.3914
21. McKenzie CI, Mackay CR, Macia L. GPR43-a prototypic metabolite sensor linking metabolic and inflammatory diseases. Trends Endocrinol Metab (2015) 26:511-2. doi:10.1016/j.tem.2015.07.009
22. Tan J, McKenzie C, Vuillermin PJ, Goverse G, Vinuesa CG, Mebius RE, et al. Dietary fiber and bacterial SCFA enhance oral tolerance and protect against food allergy through diverse cellular pathways. Cell Rep (2016) 15:2809-24. doi:10.1016/j.celrep.2016.05.047
23. Smith PM, Howitt MR, Panikov N, Michaud M, Gallini CA, Bohlooly-Y M, et al. The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis. Science (2013) 341:569-73. doi:10.1126/science.1241165
24. Le Chatelier E, Nielsen T, Qin J, Prifti E, Hildebrand F, Falony G, et al. Richness of human gut microbiome correlates with metabolic markers. Nature (2013) 500:541-6. doi:10.1038/nature12506
25. Thorburn AN, Macia L, Mackay CR. Diet, metabolites, and 'western-lifestyle' inflammatory diseases. Immunity (2014) 40:833-42. doi:10.1016/j.immuni.2014.05.014
26. Sonnenburg ED, Smits SA, Tikhonov M, Higginbottom SK, Wingreen NS, Sonnenburg JL. Diet-induced extinctions in the gut microbiota compound over generations. Nature (2016) 529:212-5. doi:10.1038/nature16504
27. Bergstrom KSB, Guttman JA, Rumi M, Ma C, Bouzari S, Khan MA, et al. Modulation of intestinal goblet cell function during infection by an attaching and effacing bacterial pathogen. Infect Immun (2008) 76:796-811. doi:10.1128/IAI.00093-07
28. Sonnenburg JL, Xu J, Leip DD, Chen C-H, Westover BP, Weatherford J, et al. Glycan foraging in vivo by an intestine-adapted bacterial symbiont. Science (2005) 307:1955-9. doi:10.1126/science.1109051
29. Desai MS, Seekatz AM, Koropatkin NM, Kamada N, Hickey CA, Wolter M, et al. A dietary fiber-deprived gut microbiota degrades the colonic mucus barrier and enhances pathogen susceptibility. Cell (2016) 167:1339-53 e21. doi:10.1016/j.cell.2016.10.043
30. Rakoff-Nahoum S, Foster KR, Comstock LE. The evolution of cooperation within the gut microbiota. Nature (2016) 533:255-9. doi:10.1038/nature17626
31. Kim M, Qie Y, Park J, Kim CH. Gut microbial metabolites fuel host antibody responses. Cell Host Microbe (2016) 20:202-14. doi:10.1016/j.chom.2016.07.001
32. Trompette A, Gollwitzer ES, Yadava K, Sichelstiel AK, Sprenger N, Ngom-Bru C, et al. Gut microbiota metabolism of dietary fiber influences allergic airway disease and hematopoiesis. Nat Med (2014) 20:159-66. doi:10.1038/nm.3444
33. Peterson LW, Artis D. Intestinal epithelial cells: regulators of barrier function and immune homeostasis. Nat Rev Immunol (2014) 14:141-53. doi:10.1038/nri3608
34. Fukuda S, Toh H, Hase K, Oshima K, Nakanishi Y, Yoshimura K, et al. Bifidobacteria can protect from enteropathogenic infection through production of acetate. Nature (2011) 469:543-7. doi:10.1038/nature09646
35. Wrzosek L, Miquel S, Noordine M-L, Bouet S, Joncquel Chevalier-Curt M, Robert V, et al. Bacteroides thetaiotaomicron and Faecalibacterium prausnitzii influence the production of mucus glycans and the development of goblet cells in the colonic epithelium of a gnotobiotic model rodent. BMC Biol (2013) 11:61. doi:10.1186/1741-7007-11-61
36. Willemsen LEM, Koetsier MA, van Deventer SJ, van Tol EA. Short chain fatty acids stimulate epithelial mucin 2 expression through differential effects on prostaglandin E(1) and E(2) production by intestinal myofibroblasts. Gut (2003) 52:1442-7. doi:10.1136/gut.52.10.1442
37. Gaudier E, Jarry A, Blottière HM, de Coppet P, Buisine MP, Aubert JP, et al. Butyrate specifically modulates MUC gene expression in intestinal epithelial goblet cells deprived of glucose. Am J Physiol Gastrointest Liver Physiol (2004) 287:G1168-74. doi:10.1152/ajpgi.00219.2004
38. Zaki MH, Boyd KL, Vogel P, Kastan MB, LamkanfiM, Kanneganti T-D. The NLRP3 inflammasome protects against loss of epithelial integrity and mortality during experimental colitis. Immunity (2010) 32:379-91. doi:10.1016/j.immuni.2010.03.003
39. LamkanfiM, Dixit VM. Mechanisms and functions of inflammasomes. Cell (2014) 157(5):1013-22. doi:10.1016/j.cell.2014.04.007
40. Goverse G, Molenaar R, Macia L, Tan J, Erkelens MN, Konijn T, et al. Diet-derived short chain fatty acids stimulate intestinal epithelial cells to induce mucosal tolerogenic dendritic cells. J Immunol (2017) 198(5):2172-81. doi:10.4049/jimmunol.1600165
41. Macpherson AJ, Geuking MB, McCoy KD. Innate and adaptive immunity in host-microbiota mutualism. Front Biosci (Schol Ed) (2012) 4:685-98
42. Mizuno M, Noto D, Kaga N, Chiba A, Miyake S. The dual role of short fatty acid chains in the pathogenesis of autoimmune disease models. PLoS One (2017) 12:e0173032. doi:10.1371/journal.pone.0173032
43. Arpaia N, Campbell C, Fan X, Dikiy S, van der Veeken J, deRoos P, et al. Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation. Nature (2013) 504:451-5. doi:10.1038/nature12726
44. Furusawa Y, Obata Y, Fukuda S, Endo TA, Nakato G, Takahashi D, et al. Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells. Nature (2013) 504:446-50. doi:10.1038/nature12721
45. Park J, Kim M, Kang SG, Jannasch AH, Cooper B, Patterson J, et al. Short-chain fatty acids induce both effector and regulatory T cells by suppression of histone deacetylases and regulation of the mTOR-S6K pathway. Mucosal Immunol (2015) 8:80-93. doi:10.1038/mi.2014.44
46. Jiminez JA, Uwiera TC, Abbott DW, Uwiera RRE, Inglis GD. Impacts of resistant starch and wheat bran consumption on enteric inflammation in relation to colonic bacterial community structures and short-chain fatty acid concentrations in mice. Gut Pathog (2016) 8:67. doi:10.1186/s13099-016-0149-6
47. Maslowski KM, Vieira AT, Ng A, Kranich J, Sierro F, Yu D, et al. Regulation of inflammatory responses by gut microbiota and chemoattractant receptor GPR43. Nature (2009) 461:1282-6. doi:10.1038/nature08530
48. Vinolo MA, Ferguson GJ, Kulkarni S, Damoulakis G, Anderson K, Bohlooly-Y M, et al. SCFAs induce mouse neutrophil chemotaxis through the GPR43 receptor. PLoS One (2011) 6(6):e21205. doi:10.1371/journal.pone.0021205
49. Sina C, Gavrilova O, Förster M, Till A, Derer S, Hildebrand F, et al. G protein-coupled receptor 43 is essential for neutrophil recruitment during intestinal inflammation. J Immunol (2009) 183:7514-22. doi:10.4049/jimmunol.0900063
50. Kamp ME, Shim R, Nicholls AJ, Oliveira AC, Mason LJ, Binge L, et al. G protein-coupled receptor 43 modulates neutrophil recruitment during acute inflammation. PLoS One (2016) 11:e0163750. doi:10.1371/journal.pone.0163750
51. Vieira AT, Galvão I, Macia LM, Sernaglia éM, Vinolo MAR, Garcia CC, et al. Dietary fiber and the short-chain fatty acid acetate promote resolution of neutrophilic inflammation in a model of gout in mice. J Leukoc Biol (2017) 101:275-84. doi:10.1189/jlb.3A1015-453RRR
52. Julia V, Macia L, Dombrowicz D. The impact of diet on asthma and allergic diseases. Nat Rev Immunol (2015) 15:308-22. doi:10.1038/nri3830