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Volumn 8, Issue APR, 2017, Pages

Improved model of proton pump crystal structure obtained by interactive molecular dynamics flexible fitting expands the mechanistic model for proton translocation in P-type ATPases

Author keywords

Arabidopsis thaliana AHA2; Crystallography; IMDFF; Membrane transport; Molecular dynamics; P type ATPases; Plasma membrane proton pump; Proton gradient

Indexed keywords

ADENOSINE TRIPHOSPHATASE; ADENOSINE TRIPHOSPHATASE (CALCIUM); ADENOSINE TRIPHOSPHATASE (ZINC); ADENOSINE TRIPHOSPHATASE P TYPE; PROTON TRANSPORTING ADENOSINE TRIPHOSPHATASE; UNCLASSIFIED DRUG;

EID: 85018786458     PISSN: None     EISSN: 1664042X     Source Type: Journal    
DOI: 10.3389/fphys.2017.00202     Document Type: Article
Times cited : (26)

References (65)
  • 1
    • 1542288949 scopus 로고    scopus 로고
    • Secondary active transport mediated by a prokaryotic homologue of ClC Cl-channels
    • Accardi, A., and Miller, C. (2004). Secondary active transport mediated by a prokaryotic homologue of ClC Cl-channels. Nature 427, 803-807. doi: 10.1038/nature02314
    • (2004) Nature , vol.427 , pp. 803-807
    • Accardi, A.1    Miller, C.2
  • 3
    • 0000395323 scopus 로고
    • The role of sodium ions in the activation of electrophorus electric organ adenosine triphosphatase
    • Albers, R. W., Fahn, S., and Koval, G. J. (1963). The role of sodium ions in the activation of electrophorus electric organ adenosine triphosphatase. Proc. Natl. Acad. Sci. U.S.A. 50, 474-481. doi: 10.1073/pnas.50.3.474
    • (1963) Proc. Natl. Acad. Sci. U.S.A , vol.50 , pp. 474-481
    • Albers, R.W.1    Fahn, S.2    Koval, G.J.3
  • 5
    • 0031964372 scopus 로고    scopus 로고
    • Evolution of substrate specificities in the P-type ATPase superfamily
    • Axelsen, K. B., and Palmgren, M. G. (1998). Evolution of substrate specificities in the P-type ATPase superfamily. J. Mol. Evol. 46, 84-101. doi: 10.1007/PL00006286
    • (1998) J. Mol. Evol , vol.46 , pp. 84-101
    • Axelsen, K.B.1    Palmgren, M.G.2
  • 6
    • 0023078709 scopus 로고
    • Potassium-proton symport in Neurospora: kinetic control by pH and membrane potential
    • Blatt, M. R., Rodriguez-Navarro, A., and Slayman, C. L. (1987). Potassium-proton symport in Neurospora: kinetic control by pH and membrane potential. J. Membr. Biol. 98, 169-189. doi: 10.1007/BF01872129
    • (1987) J. Membr. Biol , vol.98 , pp. 169-189
    • Blatt, M.R.1    Rodriguez-Navarro, A.2    Slayman, C.L.3
  • 7
    • 0001554724 scopus 로고
    • Ca-translocating ATPase of the plant plasma membrane
    • Briskin, D. P. (1990). Ca-translocating ATPase of the plant plasma membrane. Plant Physiol. 94, 397-400. doi: 10.1104/pp.94.2.397
    • (1990) Plant Physiol , vol.94 , pp. 397-400
    • Briskin, D.P.1
  • 8
    • 79961158266 scopus 로고    scopus 로고
    • P-type ATPases at a glance
    • Bublitz, M., Morth, J. P., and Nissen, P. (2011). P-type ATPases at a glance. J. Cell Sci. 124(Pt 15), 2515-2519. doi: 10.1242/jcs.088716
    • (2011) J. Cell Sci , vol.124 , pp. 2515-2519
    • Bublitz, M.1    Morth, J.P.2    Nissen, P.3
  • 9
    • 0038381484 scopus 로고    scopus 로고
    • Conserved Asp684 in transmembrane segment M6 of the plant plasma membrane P-type proton pump AHA2 is a molecular determinant of proton translocation
    • Buch-Pedersen, M. J., and Palmgren, M. G. (2003). Conserved Asp684 in transmembrane segment M6 of the plant plasma membrane P-type proton pump AHA2 is a molecular determinant of proton translocation. J. Biol. Chem. 278, 17845-17851. doi: 10.1074/jbc.M212729200
    • (2003) J. Biol. Chem , vol.278 , pp. 17845-17851
    • Buch-Pedersen, M.J.1    Palmgren, M.G.2
  • 11
    • 0034671503 scopus 로고    scopus 로고
    • Abolishment of proton pumping and accumulation in the E1P conformational state of a plant plasma membrane H+-ATPase by substitution of a conserved aspartyl residue in transmembrane segment 6
    • Buch-Pedersen, M. J., Venema, K., Serrano, R., and Palmgren, M. G. (2000). Abolishment of proton pumping and accumulation in the E1P conformational state of a plant plasma membrane H+-ATPase by substitution of a conserved aspartyl residue in transmembrane segment 6. J. Biol. Chem. 275, 39167-39173. doi: 10.1074/jbc.M007537200
    • (2000) J. Biol. Chem , vol.275 , pp. 39167-39173
    • Buch-Pedersen, M.J.1    Venema, K.2    Serrano, R.3    Palmgren, M.G.4
  • 12
    • 0035815396 scopus 로고    scopus 로고
    • A putative proton binding site of plasma membrane H(+)-ATPase identified through homology modelling
    • Bukrinsky, J. T., Buch-Pedersen, M. J., Larsen, S., and Palmgren, M. G. (2001). A putative proton binding site of plasma membrane H(+)-ATPase identified through homology modelling. FEBS Lett. 494, 6-10. doi: 10.1016/S0014-5793(01)02301-8
    • (2001) FEBS Lett , vol.494 , pp. 6-10
    • Bukrinsky, J.T.1    Buch-Pedersen, M.J.2    Larsen, S.3    Palmgren, M.G.4
  • 14
    • 84987607137 scopus 로고    scopus 로고
    • Re-evaluation of low-resolution crystal structures via interactive molecular-dynamics flexible fitting (iMDFF): a case study in complement C4
    • Croll, T. I., and Andersen, G. R. (2016). Re-evaluation of low-resolution crystal structures via interactive molecular-dynamics flexible fitting (iMDFF): a case study in complement C4. Acta Crystallogr. Struct. Biol. 72(Pt 9), 1006-1016. doi: 10.1107/S2059798316012201
    • (2016) Acta Crystallogr. Struct. Biol , vol.72 , pp. 1006-1016
    • Croll, T.I.1    Andersen, G.R.2
  • 15
    • 84959346711 scopus 로고    scopus 로고
    • Higher-resolution structure of the human insulin receptor ectodomain: multi-modal inclusion of the insert domain
    • Croll, T. I., Smith, B. J., Margetts, M. B., Whittaker, J., Weiss, M. A., Ward, C. W., et al. (2016). Higher-resolution structure of the human insulin receptor ectodomain: multi-modal inclusion of the insert domain. Structure 24, 469-476. doi: 10.1016/j.str.2015.12.014
    • (2016) Structure , vol.24 , pp. 469-476
    • Croll, T.I.1    Smith, B.J.2    Margetts, M.B.3    Whittaker, J.4    Weiss, M.A.5    Ward, C.W.6
  • 16
    • 78650063081 scopus 로고    scopus 로고
    • Chemical reactivities of cysteine substitutions in subunit a of ATP synthase define residues gating H+ transport from each side of the membrane
    • Dong, H., and Fillingame, R. H. (2010). Chemical reactivities of cysteine substitutions in subunit a of ATP synthase define residues gating H+ transport from each side of the membrane. J. Biol. Chem. 285, 39811-39818. doi: 10.1074/jbc.M110.175844
    • (2010) J. Biol. Chem , vol.285 , pp. 39811-39818
    • Dong, H.1    Fillingame, R.H.2
  • 17
    • 0037418859 scopus 로고    scopus 로고
    • Gating the selectivity filter in ClC chloride channels
    • Dutzler, R., Campbell, E. B., and MacKinnon, R. (2003). Gating the selectivity filter in ClC chloride channels. Science 300, 108-112. doi: 10.1126/science.1082708
    • (2003) Science , vol.300 , pp. 108-112
    • Dutzler, R.1    Campbell, E.B.2    MacKinnon, R.3
  • 18
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar, R. C. (2004). MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32, 1792-1797. doi: 10.1093/nar/gkh340
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 19
    • 38349129384 scopus 로고    scopus 로고
    • Roles of transmembrane segment M1 of Na+, K+-ATPase and Ca2-ATPase, the gatekeeper and the pivot
    • Einholm, A. P., Andersen, J. P., and Vilsen, B. (2007). Roles of transmembrane segment M1 of Na+, K+-ATPase and Ca2-ATPase, the gatekeeper and the pivot. J. Bioenerg. Biomembr. 39, 357-366. doi: 10.1007/s10863-007-9106-x
    • (2007) J. Bioenerg. Biomembr , vol.39 , pp. 357-366
    • Einholm, A.P.1    Andersen, J.P.2    Vilsen, B.3
  • 20
    • 77951210563 scopus 로고    scopus 로고
    • A novel mechanism of P-type ATPase autoinhibition involving both termini of the protein
    • Ekberg, K., Palmgren, M. G., Veierskov, B., and Buch-Pedersen, M. J. (2010a). A novel mechanism of P-type ATPase autoinhibition involving both termini of the protein. J. Biol. Chem. 285, 7344-7350. doi: 10.1074/jbc.M109.096123
    • (2010) J. Biol. Chem , vol.285 , pp. 7344-7350
    • Ekberg, K.1    Palmgren, M.G.2    Veierskov, B.3    Buch-Pedersen, M.J.4
  • 21
  • 22
    • 84875998903 scopus 로고    scopus 로고
    • A conserved asparagine in a P-type proton pump is required for efficient gating of protons
    • Ekberg, K., Wielandt, A. G., Buch-Pedersen, M. J., and Palmgren, M. G. (2013). A conserved asparagine in a P-type proton pump is required for efficient gating of protons. J. Biol. Chem. 288, 9610-9618. doi: 10.1074/jbc.M112.417345
    • (2013) J. Biol. Chem , vol.288 , pp. 9610-9618
    • Ekberg, K.1    Wielandt, A.G.2    Buch-Pedersen, M.J.3    Palmgren, M.G.4
  • 23
    • 0037064219 scopus 로고    scopus 로고
    • Structural model of the transmembrane Fo rotary sector of H+-transporting ATP synthase derived by solution NMR and intersubunit cross-linking in situ
    • Fillingame, R. H., and Dmitriev, O. Y. (2002). Structural model of the transmembrane Fo rotary sector of H+-transporting ATP synthase derived by solution NMR and intersubunit cross-linking in situ. Biochim. Biophys. Acta 1565, 232-245. doi: 10.1016/S0005-2736(02)00572-2
    • (2002) Biochim. Biophys. Acta , vol.1565 , pp. 232-245
    • Fillingame, R.H.1    Dmitriev, O.Y.2
  • 24
    • 20444439553 scopus 로고    scopus 로고
    • A systematic mutagenesis study of Ile-282 in transmembrane segment M4 of the plasma membrane H+-ATPase
    • Fraysse, A. S., Møller, A. L., Poulsen, L. R., Wollenweber, B., Buch-Pedersen, M. J., and Palmgren, M. G. (2005). A systematic mutagenesis study of Ile-282 in transmembrane segment M4 of the plasma membrane H+-ATPase. J. Biol. Chem. 280, 21785-21790. doi: 10.1074/jbc.M413091200
    • (2005) J. Biol. Chem , vol.280 , pp. 21785-21790
    • Fraysse, A.S.1    Møller, A.L.2    Poulsen, L.R.3    Wollenweber, B.4    Buch-Pedersen, M.J.5    Palmgren, M.G.6
  • 25
  • 26
    • 0028073322 scopus 로고
    • The plasma membrane H(+)-ATPase gene family in Arabidopsis: genomic sequence of AHA10 which is expressed primarily in developing seeds
    • Harper, J. F., Manney, L., and Sussman, M. R. (1994). The plasma membrane H(+)-ATPase gene family in Arabidopsis: genomic sequence of AHA10 which is expressed primarily in developing seeds. Mol. Gen. Genet. 244, 572-587. doi: 10.1007/BF00282747
    • (1994) Mol. Gen. Genet , vol.244 , pp. 572-587
    • Harper, J.F.1    Manney, L.2    Sussman, M.R.3
  • 27
    • 77952916753 scopus 로고    scopus 로고
    • Molecular characterization of mutant Arabidopsis plants with reduced plasma membrane proton pump activity
    • Haruta, M., Burch, H. L., Nelson, R. B., Barrett-Wilt, G., Kline, K. G., Mohsin, S. B., et al. (2010). Molecular characterization of mutant Arabidopsis plants with reduced plasma membrane proton pump activity. J. Biol. Chem. 285, 17918-17929. doi: 10.1074/jbc.M110.101733
    • (2010) J. Biol. Chem , vol.285 , pp. 17918-17929
    • Haruta, M.1    Burch, H.L.2    Nelson, R.B.3    Barrett-Wilt, G.4    Kline, K.G.5    Mohsin, S.B.6
  • 28
    • 63449091255 scopus 로고    scopus 로고
    • Functional hydration and conformational gating of proton uptake in cytochrome c oxidase
    • Henry, R. M., Yu, C. H., Rodinger, T., and Pomès, R. (2009). Functional hydration and conformational gating of proton uptake in cytochrome c oxidase. J. Mol. Biol. 387, 1165-1185. doi: 10.1016/j.jmb.2009.02.042
    • (2009) J. Mol. Biol , vol.387 , pp. 1165-1185
    • Henry, R.M.1    Yu, C.H.2    Rodinger, T.3    Pomès, R.4
  • 29
    • 84882643757 scopus 로고    scopus 로고
    • CHARMM36 all-atom additive protein force field: validation based on comparison to NMR data
    • Huang, J., and MacKerell, A. D. (2013). CHARMM36 all-atom additive protein force field: validation based on comparison to NMR data. J. Comput. Chem. 34, 2135-2145. doi: 10.1002/jcc.23354
    • (2013) J. Comput. Chem , vol.34 , pp. 2135-2145
    • Huang, J.1    MacKerell, A.D.2
  • 30
    • 0029878720 scopus 로고    scopus 로고
    • VMD: visual molecular dynamics
    • Humphrey, W., Dalke, A., and Schulten, K. (1996). VMD: visual molecular dynamics. J. Mol. Graph 14, 33-38, 27-38. doi: 10.1016/0263-7855(96)00018-5
    • (1996) J. Mol. Graph , vol.14
    • Humphrey, W.1    Dalke, A.2    Schulten, K.3
  • 31
    • 0035902609 scopus 로고    scopus 로고
    • Energy-driven subunit rotation at the interface between subunit a and the c oligomer in the F(O) sector of Escherichia coli ATP synthase
    • Hutcheon, M. L., Duncan, T. M., Ngai, H., and Cross, R. L. (2001). Energy-driven subunit rotation at the interface between subunit a and the c oligomer in the F(O) sector of Escherichia coli ATP synthase. Proc. Natl. Acad. Sci. U.S.A. 98, 8519-8524. doi: 10.1073/pnas.151236798
    • (2001) Proc. Natl. Acad. Sci. U.S.A , vol.98 , pp. 8519-8524
    • Hutcheon, M.L.1    Duncan, T.M.2    Ngai, H.3    Cross, R.L.4
  • 32
    • 0028890031 scopus 로고
    • Structure at 2.8 A resolution of cytochrome c oxidase from Paracoccus denitrificans
    • Iwata, S., Ostermeier, C., Ludwig, B., and Michel, H. (1995). Structure at 2.8 A resolution of cytochrome c oxidase from Paracoccus denitrificans. Nature 376, 660-669. doi: 10.1038/376660a0
    • (1995) Nature , vol.376 , pp. 660-669
    • Iwata, S.1    Ostermeier, C.2    Ludwig, B.3    Michel, H.4
  • 33
    • 0014029736 scopus 로고
    • Simple allosteric model for membrane pumps
    • Jardetzky, O. (1966). Simple allosteric model for membrane pumps. Nature 211, 969-970. doi: 10.1038/211969a0
    • (1966) Nature , vol.211 , pp. 969-970
    • Jardetzky, O.1
  • 34
    • 33745762313 scopus 로고    scopus 로고
    • Modulatory and catalytic modes of ATP binding by the calcium pump
    • Jensen, A. M., Sørensen, T. L., Olesen, C., Møller, J. V., and Nissen, P. (2006). Modulatory and catalytic modes of ATP binding by the calcium pump. EMBO J. 25, 2305-2314. doi: 10.1038/sj.emboj.7601135
    • (2006) EMBO J , vol.25 , pp. 2305-2314
    • Jensen, A.M.1    Sørensen, T.L.2    Olesen, C.3    Møller, J.V.4    Nissen, P.5
  • 35
    • 67649391254 scopus 로고    scopus 로고
    • Cyclopiazonic acid is complexed to a divalent metal ion when bound to the sarcoplasmic reticulum Ca2+-ATPase
    • Laursen, M., Bublitz, M., Moncoq, K., Olesen, C., Møller, J. V., Young, H. S., et al. (2009). Cyclopiazonic acid is complexed to a divalent metal ion when bound to the sarcoplasmic reticulum Ca2+-ATPase. J. Biol. Chem. 284, 13513-13518. doi: 10.1074/jbc.C900031200
    • (2009) J. Biol. Chem , vol.284 , pp. 13513-13518
    • Laursen, M.1    Bublitz, M.2    Moncoq, K.3    Olesen, C.4    Møller, J.V.5    Young, H.S.6
  • 36
    • 0032546920 scopus 로고    scopus 로고
    • Proton transfer pathways in bacteriorhodopsin at 2.3 angstrom resolution
    • Luecke, H., Richter, H. T., and Lanyi, J. K. (1998). Proton transfer pathways in bacteriorhodopsin at 2.3 angstrom resolution. Science 280, 1934-1937. doi: 10.1126/science.280.5371.1934
    • (1998) Science , vol.280 , pp. 1934-1937
    • Luecke, H.1    Richter, H.T.2    Lanyi, J.K.3
  • 37
    • 0024417113 scopus 로고
    • The amino and carboxyl termini of the Neurospora plasma membrane H+-ATPase are cytoplasmically located
    • Mandala, S. M., and Slayman, C. W. (1989). The amino and carboxyl termini of the Neurospora plasma membrane H+-ATPase are cytoplasmically located. J. Biol. Chem. 264, 16276-16281
    • (1989) J. Biol. Chem , vol.264 , pp. 16276-16281
    • Mandala, S.M.1    Slayman, C.W.2
  • 38
    • 79951681214 scopus 로고    scopus 로고
    • The sarcoplasmic Ca2+-ATPase: design of a perfect chemi-osmotic pump
    • Møller, J. V., Olesen, C., Winther, A. M., and Nissen, P. (2010). The sarcoplasmic Ca2+-ATPase: design of a perfect chemi-osmotic pump. Q. Rev. Biophys. 43, 501-566. doi: 10.1017/S003358351000017X
    • (2010) Q. Rev. Biophys , vol.43 , pp. 501-566
    • Møller, J.V.1    Olesen, C.2    Winther, A.M.3    Nissen, P.4
  • 40
    • 37249043376 scopus 로고    scopus 로고
    • The structural basis of calcium transport by the calcium pump
    • Olesen, C., Picard, M., Winther, A. M., Gyrup, C., Morth, J. P., Oxvig, C., et al. (2007). The structural basis of calcium transport by the calcium pump. Nature 450, 1036-1042. doi: 10.1038/nature06418
    • (2007) Nature , vol.450 , pp. 1036-1042
    • Olesen, C.1    Picard, M.2    Winther, A.M.3    Gyrup, C.4    Morth, J.P.5    Oxvig, C.6
  • 41
    • 0027468186 scopus 로고
    • Complementation in situ of the yeast plasma membrane H(+)-ATPase gene pma1 by an H(+)-ATPase gene from a heterologous species
    • Palmgren, M. G., and Christensen, G. (1993). Complementation in situ of the yeast plasma membrane H(+)-ATPase gene pma1 by an H(+)-ATPase gene from a heterologous species. FEBS Lett. 317, 216-222. doi: 10.1016/0014-5793(93)81279-9
    • (1993) FEBS Lett , vol.317 , pp. 216-222
    • Palmgren, M.G.1    Christensen, G.2
  • 42
    • 0030864048 scopus 로고    scopus 로고
    • X-ray structure of bacteriorhodopsin at 2.5 angstroms from microcrystals grown in lipidic cubic phases
    • Pebay-Peyroula, E., Rummel, G., Rosenbusch, J. P., and Landau, E. M. (1997). X-ray structure of bacteriorhodopsin at 2.5 angstroms from microcrystals grown in lipidic cubic phases. Science 277, 1676-1681. doi: 10.1126/science.277.5332.1676
    • (1997) Science , vol.277 , pp. 1676-1681
    • Pebay-Peyroula, E.1    Rummel, G.2    Rosenbusch, J.P.3    Landau, E.M.4
  • 43
    • 37249060052 scopus 로고    scopus 로고
    • Crystal structure of the plasma membrane proton pump
    • Pedersen, B. P., Buch-Pedersen, M. J., Morth, J. P., Palmgren, M. G., and Nissen, P. (2007). Crystal structure of the plasma membrane proton pump. Nature 450, 1111-1114. doi: 10.1038/nature06417
    • (2007) Nature , vol.450 , pp. 1111-1114
    • Pedersen, B.P.1    Buch-Pedersen, M.J.2    Morth, J.P.3    Palmgren, M.G.4    Nissen, P.5
  • 44
    • 84921052679 scopus 로고    scopus 로고
    • Large scale identification and categorization of protein sequences using structured logistic regression
    • Pedersen, B. P., Ifrim, G., Liboriussen, P., Axelsen, K. B., Palmgren, M. G., Nissen, P., et al. (2014). Large scale identification and categorization of protein sequences using structured logistic regression. PLoS ONE 9:e85139. doi: 10.1371/journal.pone.0085139
    • (2014) PLoS ONE , vol.9
    • Pedersen, B.P.1    Ifrim, G.2    Liboriussen, P.3    Axelsen, K.B.4    Palmgren, M.G.5    Nissen, P.6
  • 45
    • 33646830005 scopus 로고
    • Ion motive ATPases I. Ubiquity properties, and significance to cell function
    • Pedersen, P. L., and Carafoli, E. (1987). Ion motive ATPases. I. Ubiquity properties, and significance to cell function. Trends Biochem. Sci. 12, 146-150. doi: 10.1016/0968-0004(87)90071-5
    • (1987) Trends Biochem. Sci , vol.12 , pp. 146-150
    • Pedersen, P.L.1    Carafoli, E.2
  • 47
    • 0024977518 scopus 로고
    • Deletion analysis of yeast plasma membrane H+-ATPase and identification of a regulatory domain at the carboxyl-terminus
    • Portillo, F., de Larrinoa, I. F., and Serrano, R. (1989). Deletion analysis of yeast plasma membrane H+-ATPase and identification of a regulatory domain at the carboxyl-terminus. FEBS Lett. 247, 381-385. doi: 10.1016/0014-5793(89)81375-4
    • (1989) FEBS Lett , vol.247 , pp. 381-385
    • Portillo, F.1    de Larrinoa, I.F.2    Serrano, R.3
  • 48
    • 13344294802 scopus 로고
    • An enzymatic mechanism of active sodium and potassium transport
    • Post, R. L., and Sen, A. K. (1965). An enzymatic mechanism of active sodium and potassium transport. J. Histochem. Cytochem. 13, 105-112. doi: 10.1177/13.2.105
    • (1965) J. Histochem. Cytochem , vol.13 , pp. 105-112
    • Post, R.L.1    Sen, A.K.2
  • 49
    • 33750807024 scopus 로고    scopus 로고
    • Identification of conserved lipid/detergent-binding sites in a high-resolution structure of the membrane protein cytochrome c oxidase
    • Qin, L., Hiser, C., Mulichak, A., Garavito, R. M., and Ferguson-Miller, S. (2006). Identification of conserved lipid/detergent-binding sites in a high-resolution structure of the membrane protein cytochrome c oxidase. Proc. Natl. Acad. Sci. U.S.A. 103, 16117-16122. doi: 10.1073/pnas.0606149103
    • (2006) Proc. Natl. Acad. Sci. U.S.A , vol.103 , pp. 16117-16122
    • Qin, L.1    Hiser, C.2    Mulichak, A.3    Garavito, R.M.4    Ferguson-Miller, S.5
  • 51
    • 44649104570 scopus 로고    scopus 로고
    • Control of gastric acid secretion in health and disease
    • Schubert, M. L., and Peura, D. A. (2008). Control of gastric acid secretion in health and disease. Gastroenterology 134, 1842-1860. doi: 10.1053/j.gastro.2008.05.021
    • (2008) Gastroenterology , vol.134 , pp. 1842-1860
    • Schubert, M.L.1    Peura, D.A.2
  • 52
    • 0022607425 scopus 로고
    • Yeast plasma membrane ATPase is essential for growth and has homology with (Na+ + K+), K+-and Ca2+-ATPases
    • Serrano, R., Kielland-Brandt, M. C., and Fink, G. R. (1986). Yeast plasma membrane ATPase is essential for growth and has homology with (Na+ + K+), K+-and Ca2+-ATPases. Nature 319, 689-693. doi: 10.1038/319689a0
    • (1986) Nature , vol.319 , pp. 689-693
    • Serrano, R.1    Kielland-Brandt, M.C.2    Fink, G.R.3
  • 53
    • 2942668632 scopus 로고    scopus 로고
    • Phosphoryl transfer and calcium ion occlusion in the calcium pump
    • Sørensen, T. L., Moller, J. V., and Nissen, P. (2004). Phosphoryl transfer and calcium ion occlusion in the calcium pump. Science 304, 1672-1675. doi: 10.1126/science.1099366
    • (2004) Science , vol.304 , pp. 1672-1675
    • Sørensen, T.L.1    Moller, J.V.2    Nissen, P.3
  • 54
    • 0036382724 scopus 로고    scopus 로고
    • The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides
    • Svensson-Ek, M., Abramson, J., Larsson, G., Tornroth, S., Brzezinski, P., and Iwata, S. (2002). The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides. J. Mol. Biol. 321, 329-339. doi: 10.1016/S0022-2836(02)00619-8
    • (2002) J. Mol. Biol , vol.321 , pp. 329-339
    • Svensson-Ek, M.1    Abramson, J.2    Larsson, G.3    Tornroth, S.4    Brzezinski, P.5    Iwata, S.6
  • 55
    • 84874957001 scopus 로고    scopus 로고
    • Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state
    • Toyoshima, C., Iwasawa, S., Ogawa, H., Hirata, A., Tsueda, J., and Inesi, G. (2013). Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state. Nature 495, 260-264. doi: 10.1038/nature11899
    • (2013) Nature , vol.495 , pp. 260-264
    • Toyoshima, C.1    Iwasawa, S.2    Ogawa, H.3    Hirata, A.4    Tsueda, J.5    Inesi, G.6
  • 56
    • 0034621834 scopus 로고    scopus 로고
    • Crystal structure of the calcium pump of sarcoplasmic reticulum at 2.6 A resolution
    • Toyoshima, C., Nakasako, M., Nomura, H., and Ogawa, H. (2000). Crystal structure of the calcium pump of sarcoplasmic reticulum at 2.6 A resolution. Nature 405, 647-655. doi: 10.1038/35015017
    • (2000) Nature , vol.405 , pp. 647-655
    • Toyoshima, C.1    Nakasako, M.2    Nomura, H.3    Ogawa, H.4
  • 57
    • 9244232176 scopus 로고    scopus 로고
    • Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues
    • Toyoshima, C., Nomura, H., and Tsuda, T. (2004). Lumenal gating mechanism revealed in calcium pump crystal structures with phosphate analogues. Nature 432, 361-368. doi: 10.1038/nature02981
    • (2004) Nature , vol.432 , pp. 361-368
    • Toyoshima, C.1    Nomura, H.2    Tsuda, T.3
  • 58
    • 0029942862 scopus 로고    scopus 로고
    • The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A
    • Tsukihara, T., Aoyama, H., Yamashita, E., Tomizaki, T., Yamaguchi, H., Shinzawa-Itoh, K., et al. (1996). The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A. Science 272, 1136-1144. doi: 10.1126/science.272.5265.1136
    • (1996) Science , vol.272 , pp. 1136-1144
    • Tsukihara, T.1    Aoyama, H.2    Yamashita, E.3    Tomizaki, T.4    Yamaguchi, H.5    Shinzawa-Itoh, K.6
  • 59
    • 84871545594 scopus 로고    scopus 로고
    • Automation of the CHARMM General Force Field (CGenFF) I: bond perception and atom typing
    • Vanommeslaeghe, K., and MacKerell, A. D. Jr. (2012). Automation of the CHARMM General Force Field (CGenFF) I: bond perception and atom typing. J. Chem. Inf. Model. 52, 3144-3154. doi: 10.1021/ci300363c
    • (2012) J. Chem. Inf. Model , vol.52 , pp. 3144-3154
    • Vanommeslaeghe, K.1    MacKerell, A.D.2
  • 60
    • 84871544678 scopus 로고    scopus 로고
    • Automation of the CHARMM General Force Field (CGenFF) II: assignment of bonded parameters and partial atomic charges
    • Vanommeslaeghe, K., Raman, E. P., and MacKerell, A. D. Jr. (2012). Automation of the CHARMM General Force Field (CGenFF) II: assignment of bonded parameters and partial atomic charges. J. Chem. Inf. Model. 52, 3155-3168. doi: 10.1021/ci3003649
    • (2012) J. Chem. Inf. Model , vol.52 , pp. 3155-3168
    • Vanommeslaeghe, K.1    Raman, E.P.2    MacKerell, A.D.3
  • 61
    • 84962256385 scopus 로고    scopus 로고
    • Direct observation of proton pumping by a eukaryotic P-type ATPase
    • Veshaguri, S., Christensen, S. M., Kemmer, G. C., Ghale, G., Møller, M. P., Lohr, C., et al. (2016). Direct observation of proton pumping by a eukaryotic P-type ATPase. Science 351, 1469-1473. doi: 10.1126/science.aad6429
    • (2016) Science , vol.351 , pp. 1469-1473
    • Veshaguri, S.1    Christensen, S.M.2    Kemmer, G.C.3    Ghale, G.4    Møller, M.P.5    Lohr, C.6
  • 62
    • 84925941003 scopus 로고    scopus 로고
    • Structure and mechanism of Zn2+-transporting P-type ATPases
    • Wang, K., Sitsel, O., Meloni, G., Autzen, H. E., Andersson, M., Klymchuk, T., et al. (2014). Structure and mechanism of Zn2+-transporting P-type ATPases. Nature 514, 518-522. doi: 10.1038/nature13618
    • (2014) Nature , vol.514 , pp. 518-522
    • Wang, K.1    Sitsel, O.2    Meloni, G.3    Autzen, H.E.4    Andersson, M.5    Klymchuk, T.6
  • 63
    • 84874994481 scopus 로고    scopus 로고
    • The sarcolipin-bound calcium pump stabilizes calcium sites exposed to the cytoplasm
    • Winther, A. M., Bublitz, M., Karlsen, J. L., Moller, J. V., Hansen, J. B., Nissen, P., et al. (2013). The sarcolipin-bound calcium pump stabilizes calcium sites exposed to the cytoplasm. Nature 495, 265-269. doi: 10.1038/nature11900
    • (2013) Nature , vol.495 , pp. 265-269
    • Winther, A.M.1    Bublitz, M.2    Karlsen, J.L.3    Moller, J.V.4    Hansen, J.B.5    Nissen, P.6
  • 65
    • 79954415607 scopus 로고    scopus 로고
    • Structural insights into the high affinity binding of cardiotonic steroids to the Na+,K+-ATPase
    • Yatime, L., Laursen, M., Morth, J. P., Esmann, M., Nissen, P., and Fedosova, N. U. (2011). Structural insights into the high affinity binding of cardiotonic steroids to the Na+,K+-ATPase. J. Struct. Biol. 174, 296-306. doi: 10.1016/j.jsb.2010.12.004
    • (2011) J. Struct. Biol , vol.174 , pp. 296-306
    • Yatime, L.1    Laursen, M.2    Morth, J.P.3    Esmann, M.4    Nissen, P.5    Fedosova, N.U.6


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