메뉴 건너뛰기




Volumn 198, Issue 9, 2017, Pages 3375-3379

Jingle bells: A repository of immune-related single-cell RNA-sequencing datasets

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CELL SPECIFICITY; DATA ANALYSIS; GENE MUTATION; GENETIC VARIATION; GENOME ANALYSIS; HEMATOPOIETIC STEM CELL; IMMUNOCOMPETENT CELL; MITOCHONDRION; RNA SEQUENCE; RNA SPLICING; SEQUENCE ALIGNMENT; SEQUENCE DATABASE; ANIMAL; BIOLOGY; GENE EXPRESSION PROFILING; GENETICS; GENOME; HIGH THROUGHPUT SEQUENCING; HUMAN; IMMUNITY; IMMUNOLOGY; INFORMATION PROCESSING; MOUSE; PROCEDURES; SEQUENCE ANALYSIS; SINGLE CELL ANALYSIS; SOFTWARE; ZEBRA FISH;

EID: 85018474650     PISSN: 00221767     EISSN: 15506606     Source Type: Journal    
DOI: 10.4049/jimmunol.1700272     Document Type: Article
Times cited : (30)

References (22)
  • 1
    • 84928705633 scopus 로고    scopus 로고
    • Each cell counts: Hematopoiesis and immunity research in the era of single cell genomics
    • Jaitin, D. A., H. Keren-Shaul, N. Elefant, and I. Amit. 2015. Each cell counts: hematopoiesis and immunity research in the era of single cell genomics. Semin. Immunol. 27: 67-71.
    • (2015) Semin. Immunol , Issue.27 , pp. 67-71
    • Jaitin, D.A.1    Keren-Shaul, H.2    Elefant, N.3    Amit, I.4
  • 2
    • 84994065736 scopus 로고    scopus 로고
    • Genetics and immunity in the era of single-cell genomics
    • Vieira Braga, F. A., S. A. Teichmann, and X. Chen. 2016. Genetics and immunity in the era of single-cell genomics. Hum. Mol. Genet. 25(R2): R141-R148.
    • (2016) Hum. Mol. Genet , vol.25 , Issue.2 , pp. R141-R148
    • Vieira Braga, F.A.1    Teichmann, S.A.2    Chen, X.3
  • 4
    • 84982806105 scopus 로고    scopus 로고
    • TSCAN: Pseudo-Time reconstruction and evaluation in single-cell RNA-seq analysis
    • Ji, Z., and H. Ji. 2016. TSCAN: pseudo-Time reconstruction and evaluation in single-cell RNA-seq analysis. Nucleic Acids Res. 44: e117.
    • (2016) Nucleic Acids Res , Issue.44 , pp. e117
    • Ji, Z.1    Ji, H.2
  • 5
    • 84955706109 scopus 로고    scopus 로고
    • ZIFA: Dimensionality reduction for zero-inflated single-cell gene expression analysis
    • Pierson, E., and C. Yau. 2015. ZIFA: dimensionality reduction for zero-inflated single-cell gene expression analysis. Genome Biol. 16: 241.
    • (2015) Genome Biol , vol.16 , pp. 241
    • Pierson, E.1    Yau, C.2
  • 9
    • 84862198590 scopus 로고    scopus 로고
    • The sequence read archive: Explosive growth of sequencing data
    • International Nucleotide Sequence Database Collaboration
    • Kodama, Y., M. Shumway, and R. Leinonen, International Nucleotide Sequence Database Collaboration. 2012. The sequence read archive: explosive growth of sequencing data. Nucleic Acids Res. 40: D54-D56.
    • (2012) Nucleic Acids Res , Issue.40 , pp. D54-D56
    • Kodama, Y.1    Shumway, M.2    Leinonen, R.3
  • 12
    • 84926519013 scopus 로고    scopus 로고
    • HISAT: A fast spliced aligner with low memory requirements
    • Kim, D., B. Langmead, and S. L. Salzberg. 2015. HISAT: A fast spliced aligner with low memory requirements. Nat. Methods 12: 357-360.
    • (2015) Nat. Methods , vol.12 , pp. 357-360
    • Kim, D.1    Langmead, B.2    Salzberg, S.L.3
  • 14
    • 84950290139 scopus 로고    scopus 로고
    • Transcriptional heterogeneity and lineage commitment in myeloid progenitors. [Published erratum appears in 2016 Cell 164: 325.]
    • Paul, F., Y. Arkin, A. Giladi, D. A. Jaitin, E. Kenigsberg, H. Keren-Shaul, D. Winter, D. Lara-Astiaso, M. Gury, A. Weiner, et al. 2015. Transcriptional heterogeneity and lineage commitment in myeloid progenitors. [Published erratum appears in 2016 Cell 164: 325.] Cell 163: 1663-1677.
    • (2015) Cell , vol.163 , pp. 1663-1677
    • Paul, F.1    Arkin, Y.2    Giladi, A.3    Jaitin, D.A.4    Kenigsberg, E.5    Keren-Shaul, H.6    Winter, D.7    Lara-Astiaso, D.8    Gury, M.9    Weiner, A.10
  • 18
    • 84913594338 scopus 로고    scopus 로고
    • Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-Antigen expression in thymic epithelia
    • Sansom, S. N., N. Shikama-Dorn, S. Zhanybekova, G. Nusspaumer, I. C. Macaulay, M. E. Deadman, A. Heger, C. P. Ponting, and G. A. Holländer. 2014. Population and single-cell genomics reveal the Aire dependency, relief from Polycomb silencing, and distribution of self-Antigen expression in thymic epithelia. Genome Res. 24: 1918-1931.
    • (2014) Genome Res , vol.24 , pp. 1918-1931
    • Sansom, S.N.1    Shikama-Dorn, N.2    Zhanybekova, S.3    Nusspaumer, G.4    Macaulay, I.C.5    Deadman, M.E.6    Heger, A.7    Ponting, C.P.8    Holländer, G.A.9
  • 21
    • 84939622896 scopus 로고    scopus 로고
    • Aire controls gene expression in the thymic epithelium with ordered stochasticity
    • Meredith, M., D. Zemmour, D. Mathis, and C. Benoist. 2015. Aire controls gene expression in the thymic epithelium with ordered stochasticity. Nat. Immunol. 16: 942-949.
    • (2015) Nat. Immunol , Issue.16 , pp. 942-949
    • Meredith, M.1    Zemmour, D.2    Mathis, D.3    Benoist, C.4
  • 22
    • 84941929935 scopus 로고    scopus 로고
    • Single-cell transcriptomic reconstruction reveals cell cycle and multi-lineage differentiation defects in Bcl11a-deficient hematopoietic stem cells
    • Tsang, J. C., Y. Yu, S. Burke, F. Buettner, C. Wang, A. A. Kolodziejczyk, S. A. Teichmann, L. Lu, and P. Liu. 2015. Single-cell transcriptomic reconstruction reveals cell cycle and multi-lineage differentiation defects in Bcl11a-deficient hematopoietic stem cells. Genome Biol. 16: 178.
    • (2015) Genome Biol , Issue.16 , pp. 178
    • Tsang, J.C.1    Yu, Y.2    Burke, S.3    Buettner, F.4    Wang, C.5    Kolodziejczyk, A.A.6    Teichmann, S.A.7    Lu, L.8    Liu, P.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.