-
1
-
-
78149236787
-
DisGeNET: A Cytoscape plugin to visualize, integrate, search and analyze gene-disease networks
-
Bauer-Mehren, A., Rautschka, M., Sanz, F. and Furlong, L.I. (2010) DisGeNET: a Cytoscape plugin to visualize, integrate, search and analyze gene-disease networks. Bioinformatics, 26, 2924-2926.
-
(2010)
Bioinformatics
, vol.26
, pp. 2924-2926
-
-
Bauer-Mehren, A.1
Rautschka, M.2
Sanz, F.3
Furlong, L.I.4
-
2
-
-
84939221315
-
DisGeNET: A discovery platform for the dynamical exploration of human diseases and their genes
-
Pi ñero, J., Queralt-Rosinach, N., Bravo, A., Deu-Pons, J., Bauer-Mehren, A., Baron, M., Sanz, F. and Furlong, L.I. (2015) DisGeNET: a discovery platform for the dynamical exploration of human diseases and their genes. Database, bav028.
-
(2015)
Database
, pp. bav028
-
-
Pi Ñero, J.1
Queralt-Rosinach, N.2
Bravo, A.3
Deu-Pons, J.4
Bauer-Mehren, A.5
Baron, M.6
Sanz, F.7
Furlong, L.I.8
-
3
-
-
84941026118
-
The Comparative Toxicogenomics Database's 10th year anniversary: Update 2015
-
Davis, A.P., Grondin, C.J., Lennon-Hopkins, K., Saraceni-Richards, C., Sciaky, D., King, B.L., Wiegers, T.C. and Mattingly, C.J. (2015) The Comparative Toxicogenomics Database's 10th year anniversary: update 2015. Nucleic Acids Res., 43, D914-D920.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D914-D920
-
-
Davis, A.P.1
Grondin, C.J.2
Lennon-Hopkins, K.3
Saraceni-Richards, C.4
Sciaky, D.5
King, B.L.6
Wiegers, T.C.7
Mattingly, C.J.8
-
4
-
-
84946069451
-
UniProt: A hub for protein information
-
The UniProt Consortium
-
The UniProt Consortium (2014) UniProt: a hub for protein information. Nucleic Acids Res., 43, D204-D212.
-
(2014)
Nucleic Acids Res.
, vol.43
, pp. D204-D212
-
-
-
5
-
-
84976904305
-
ClinVar: Public archive of interpretations of clinically relevant variants
-
Landrum, M.J., Lee, J.M., Benson, M., Brown, G., Chao, C., Chitipiralla, S., Gu, B., Hart, J., Hoffman, D., Hoover, J. et al. (2016) ClinVar: public archive of interpretations of clinically relevant variants. Nucleic Acids Res., 44, D862-D868.
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D862-D868
-
-
Landrum, M.J.1
Lee, J.M.2
Benson, M.3
Brown, G.4
Chao, C.5
Chitipiralla, S.6
Gu, B.7
Hart, J.8
Hoffman, D.9
Hoover, J.10
-
6
-
-
84864358886
-
Representation of rare diseases in health information systems: The Orphanet approach to serve a wide range of end users
-
Rath, A., Olry, A., Dhombres, F., Brandt, M.M., Urbero, B. and Ayme, S. (2012) Representation of rare diseases in health information systems: the Orphanet approach to serve a wide range of end users. Hum. Mutat., 33, 803-808.
-
(2012)
Hum. Mutat.
, vol.33
, pp. 803-808
-
-
Rath, A.1
Olry, A.2
Dhombres, F.3
Brandt, M.M.4
Urbero, B.5
Ayme, S.6
-
7
-
-
84891790401
-
The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
-
Welter, D., MacArthur, J., Morales, J., Burdett, T., Hall, P., Junkins, H., Klemm, A., Flicek, P., Manolio, T., Hindorff, L. et al. (2014) The NHGRI GWAS Catalog, a curated resource of SNP-trait associations. Nucleic Acids Res., 42, D1001-D1006.
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. D1001-D1006
-
-
Welter, D.1
MacArthur, J.2
Morales, J.3
Burdett, T.4
Hall, P.5
Junkins, H.6
Klemm, A.7
Flicek, P.8
Manolio, T.9
Hindorff, L.10
-
8
-
-
84941092929
-
The Rat Genome Database 2015: Genomic, phenotypic and environmental variations and disease
-
Shimoyama, M., De Pons, J., Hayman, G.T., Laulederkind, S.J.F., Liu, W., Nigam, R., Petri, V., Smith, J.R., Tutaj, M., Wang, S.-J. et al. (2015) The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease. Nucleic Acids Res., 43, D743-D750.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D743-D750
-
-
Shimoyama, M.1
De Pons, J.2
Hayman, G.T.3
Laulederkind, S.J.F.4
Liu, W.5
Nigam, R.6
Petri, V.7
Smith, J.R.8
Tutaj, M.9
Wang, S.-J.10
-
9
-
-
84941069145
-
The Mouse Genome Database (MGD): Facilitating mouse as a model for human biology and disease
-
Eppig, J.T., Blake, J.A., Bult, C.J., Kadin, J.A. and Richardson, J.E. (2015) The Mouse Genome Database (MGD): facilitating mouse as a model for human biology and disease. Nucleic Acids Res., 43, D726-D736.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D726-D736
-
-
Eppig, J.T.1
Blake, J.A.2
Bult, C.J.3
Kadin, J.A.4
Richardson, J.E.5
-
10
-
-
2442604715
-
The genetic association database
-
Becker, K.G., Barnes, K.C., Bright, T.J. and Wang, S.A. (2004) The genetic association database. Nat. Genet., 36, 431-432.
-
(2004)
Nat. Genet.
, vol.36
, pp. 431-432
-
-
Becker, K.G.1
Barnes, K.C.2
Bright, T.J.3
Wang, S.A.4
-
11
-
-
43749110484
-
Extraction of semantic biomedical relations from text using conditional random fields
-
Bundschus, M., Dejori, M., Stetter, M., Tresp, V. and Kriegel, H.-P. (2008) Extraction of semantic biomedical relations from text using conditional random fields. BMC Bioinformatics, 9, 207.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 207
-
-
Bundschus, M.1
Dejori, M.2
Stetter, M.3
Tresp, V.4
Kriegel, H.-P.5
-
12
-
-
84900334705
-
A knowledge-driven approach to extract disease-related biomarkers from the literature
-
Bravo, A., Cases, M., Queralt-Rosinach, N., Sanz, F. and Furlong, L.I. (2014) A knowledge-driven approach to extract disease-related biomarkers from the literature. Biomed Res. Int., 2014, 253128.
-
(2014)
Biomed Res. Int.
, vol.2014
, pp. 253128
-
-
Bravo, A.1
Cases, M.2
Queralt-Rosinach, N.3
Sanz, F.4
Furlong, L.I.5
-
13
-
-
84931264092
-
Extraction of relations between genes and diseases from text and large-scale data analysis: Implications for translational research
-
Bravo, À., Piñero, J., Queralt-Rosinach, N., Rautschka, M. and Furlong, L.I. (2015) Extraction of relations between genes and diseases from text and large-scale data analysis: implications for translational research. BMC Bioinformatics, 16, 55.
-
(2015)
BMC Bioinformatics
, vol.16
, pp. 55
-
-
Bravo, À.1
Piñero, J.2
Queralt-Rosinach, N.3
Rautschka, M.4
Furlong, L.I.5
-
14
-
-
0345863927
-
The Unified Medical Language System (UMLS): Integrating biomedical terminology
-
Bodenreider, O. (2004) The Unified Medical Language System (UMLS): integrating biomedical terminology. Nucleic Acids Res., 32, D267-D2710.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. D267-D2710
-
-
Bodenreider, O.1
-
15
-
-
84941103725
-
Disease Ontology 2015 update: An expanded and updated database of human diseases for linking biomedical knowledge through disease data
-
Kibbe, W.A., Arze, C., Felix, V., Mitraka, E., Bolton, E., Fu, G., Mungall, C.J., Binder, J.X., Malone, J., Vasant, D. et al. (2015) Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data. Nucleic Acids Res., 43, D1071-D1078.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D1071-D1078
-
-
Kibbe, W.A.1
Arze, C.2
Felix, V.3
Mitraka, E.4
Bolton, E.5
Fu, G.6
Mungall, C.J.7
Binder, J.X.8
Malone, J.9
Vasant, D.10
-
16
-
-
84937523757
-
The human phenotype ontology: Semantic unification of common and rare disease
-
Groza, T., Köhler, S., Moldenhauer, D., Vasilevsky, N., Baynam, G., Zemojtel, T., Schriml, L.M., Kibbe, W.A., Schofield, P.N., Beck, T. et al. (2015) The human phenotype ontology: semantic unification of common and rare disease. Am. J. Hum. Genet., 97, 111-124.
-
(2015)
Am. J. Hum. Genet.
, vol.97
, pp. 111-124
-
-
Groza, T.1
Köhler, S.2
Moldenhauer, D.3
Vasilevsky, N.4
Baynam, G.5
Zemojtel, T.6
Schriml, L.M.7
Kibbe, W.A.8
Schofield, P.N.9
Beck, T.10
-
17
-
-
84976870113
-
The Reactome pathway Knowledgebase
-
Fabregat, A., Sidiropoulos, K., Garapati, P., Gillespie, M., Hausmann, K., Haw, R., Jassal, B., Jupe, S., Korninger, F., McKay, S. et al. (2015) The Reactome pathway Knowledgebase. Nucleic Acids Res., 44, D481-D487.
-
(2015)
Nucleic Acids Res.
, vol.44
, pp. D481-D487
-
-
Fabregat, A.1
Sidiropoulos, K.2
Garapati, P.3
Gillespie, M.4
Hausmann, K.5
Haw, R.6
Jassal, B.7
Jupe, S.8
Korninger, F.9
McKay, S.10
-
18
-
-
84976875034
-
PANTHER version 10: Expanded protein families and functions, and analysis tools
-
Mi, H., Poudel, S., Muruganujan, A., Casagrande, J.T. and Thomas, P.D. (2016) PANTHER version 10: expanded protein families and functions, and analysis tools. Nucleic Acids Res., 44, D336-D342.
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D336-D342
-
-
Mi, H.1
Poudel, S.2
Muruganujan, A.3
Casagrande, J.T.4
Thomas, P.D.5
-
19
-
-
0035173378
-
DbSNP: The NCBI database of genetic variation
-
Sherry, S.T., Ward, M.H., Kholodov, M., Baker, J., Phan, L., Smigielski, E.M. and Sirotkin, K. (2001) dbSNP: the NCBI database of genetic variation. Nucleic Acids Res., 29, 308-311.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 308-311
-
-
Sherry, S.T.1
Ward, M.H.2
Kholodov, M.3
Baker, J.4
Phan, L.5
Smigielski, E.M.6
Sirotkin, K.7
-
20
-
-
84982253941
-
Analysis of protein-coding genetic variation in 60, 706 humans
-
Lek, M., Karczewski, K.J., Minikel, E. V., Samocha, K.E., Banks, E., Fennell, T., O'Donnell-Luria, A.H., Ware, J.S., Hill, A.J., Cummings, B.B. et al. (2016) Analysis of protein-coding genetic variation in 60, 706 humans. Nature, 536, 285-291.
-
(2016)
Nature
, vol.536
, pp. 285-291
-
-
Lek, M.1
Karczewski, K.J.2
Minikel, E.V.3
Samocha, K.E.4
Banks, E.5
Fennell, T.6
O'Donnell-Luria, A.H.7
Ware, J.S.8
Hill, A.J.9
Cummings, B.B.10
-
21
-
-
84943171338
-
A global reference for human genetic variation
-
Auton, A., Abecasis, G.R., Altshuler, D.M., Durbin, R.M., Abecasis, G.R., Bentley, D.R., Chakravarti, A., Clark, A.G., Donnelly, P., Eichler, E.E. et al. (2015) A global reference for human genetic variation. Nature, 526, 68-74.
-
(2015)
Nature
, vol.526
, pp. 68-74
-
-
Auton, A.1
Abecasis, G.R.2
Altshuler, D.M.3
Durbin, R.M.4
Abecasis, G.R.5
Bentley, D.R.6
Chakravarti, A.7
Clark, A.G.8
Donnelly, P.9
Eichler, E.E.10
-
22
-
-
84973338712
-
The ensembl variant effect predictor
-
McLaren, W., Gil, L., Hunt, S.E., Riat, H.S., Ritchie, G.R.S., Thormann, A., Flicek, P. and Cunningham, F. (2016) The Ensembl Variant Effect Predictor. Genome Biol., 17, 122.
-
(2016)
Genome Biol.
, vol.17
, pp. 122
-
-
McLaren, W.1
Gil, L.2
Hunt, S.E.3
Riat, H.S.4
Ritchie, G.R.S.5
Thormann, A.6
Flicek, P.7
Cunningham, F.8
-
23
-
-
84992396643
-
DisGeNET-RDF: Harnessing the innovative power of the semantic web to explore the genetic basis of diseases
-
Queralt-Rosinach, N., Piñero, J., Bravo, À., Sanz, F. and Furlong, L.I. (2016) DisGeNET-RDF: harnessing the innovative power of the semantic web to explore the genetic basis of diseases. Bioinformatics, 32, 2236-2238.
-
(2016)
Bioinformatics
, vol.32
, pp. 2236-2238
-
-
Queralt-Rosinach, N.1
Piñero, J.2
Bravo, À.3
Sanz, F.4
Furlong, L.I.5
-
24
-
-
84976465112
-
Publishing DisGeNET as nanopublications
-
Queralt-Rosinach, N., Kuhn, T., Chichester, C., Dumontier, M., Sanz, F. and Furlong, L.I. (2016) Publishing DisGeNET as nanopublications. Semant. Web, 7, 519-528.
-
(2016)
Semant. Web
, vol.7
, pp. 519-528
-
-
Queralt-Rosinach, N.1
Kuhn, T.2
Chichester, C.3
Dumontier, M.4
Sanz, F.5
Furlong, L.I.6
-
25
-
-
84962269370
-
The FAIR Guiding Principles for scientific data management and stewardship
-
Wilkinson, M.D., Dumontier, M., Aalbersberg, Ij.J., Appleton, G., Axton, M., Baak, A., Blomberg, N., Boiten, J.-W., da Silva Santos, L.B., Bourne, P.E. et al. (2016) The FAIR Guiding Principles for scientific data management and stewardship. Sci. Data, 3, 160018.
-
(2016)
Sci. Data
, vol.3
, pp. 160018
-
-
Wilkinson, M.D.1
Dumontier, M.2
Aalbersberg, I.J.J.3
Appleton, G.4
Axton, M.5
Baak, A.6
Blomberg, N.7
Boiten, J.-W.8
Da Silva Santos, L.B.9
Bourne, P.E.10
-
26
-
-
84921861095
-
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery
-
Dumontier, M., Baker, C.J., Baran, J., Callahan, A., Chepelev, L., Cruz-Toledo, J., Del Rio, N.R., Duck, G., Furlong, L.I., Keath, N. et al. (2014) The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery. J. Biomed. Semantics, 5, 14.
-
(2014)
J. Biomed. Semantics
, vol.5
, pp. 14
-
-
Dumontier, M.1
Baker, C.J.2
Baran, J.3
Callahan, A.4
Chepelev, L.5
Cruz-Toledo, J.6
Del Rio, N.R.7
Duck, G.8
Furlong, L.I.9
Keath, N.10
-
27
-
-
84976868788
-
WikiPathways: Capturing the full diversity of pathway knowledge
-
Kutmon, M., Riutta, A., Nunes, N., Hanspers, K., Willighagen, E.L., Bohler, A., Mélius, J., Waagmeester, A., Sinha, S.R., Miller, R. et al. (2016) WikiPathways: capturing the full diversity of pathway knowledge. Nucleic Acids Res., 44, D488-D494.
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D488-D494
-
-
Kutmon, M.1
Riutta, A.2
Nunes, N.3
Hanspers, K.4
Willighagen, E.L.5
Bohler, A.6
Mélius, J.7
Waagmeester, A.8
Sinha, S.R.9
Miller, R.10
-
28
-
-
84899523552
-
The EBI RDF platform: Linked open data for the life sciences
-
Jupp, S., Malone, J., Bolleman, J., Brandizi, M., Davies, M., Garcia, L., Gaulton, A., Gehant, S., Laibe, C., Redaschi, N. et al. (2014) The EBI RDF platform: linked open data for the life sciences. Bioinformatics, 30, 1338-1339.
-
(2014)
Bioinformatics
, vol.30
, pp. 1338-1339
-
-
Jupp, S.1
Malone, J.2
Bolleman, J.3
Brandizi, M.4
Davies, M.5
Garcia, L.6
Gaulton, A.7
Gehant, S.8
Laibe, C.9
Redaschi, N.10
-
29
-
-
84976878197
-
Expression Atlas update-an integrated database of gene and protein expression in humans, animals and plants
-
Petryszak, R., Keays, M., Tang, Y.A., Fonseca, N.A., Barrera, E., Burdett, T., Füllgrabe, A., Fuentes, A.M.-P., Jupp, S., Koskinen, S. et al. (2016) Expression Atlas update-an integrated database of gene and protein expression in humans, animals and plants. Nucleic Acids Res., 44, D746-D752.
-
(2016)
Nucleic Acids Res.
, vol.44
, pp. D746-D752
-
-
Petryszak, R.1
Keays, M.2
Tang, Y.A.3
Fonseca, N.A.4
Barrera, E.5
Burdett, T.6
Füllgrabe, A.7
Fuentes, A.M.-P.8
Jupp, S.9
Koskinen, S.10
-
31
-
-
84938292742
-
The support of human genetic evidence for approved drug indications
-
Nelson, M.R., Tipney, H., Painter, J.L., Shen, J., Nicoletti, P., Shen, Y., Floratos, A., Sham, P.C., Li, M.J., Wang, J. et al. (2015) The support of human genetic evidence for approved drug indications. Nat. Genet., 47, 856-860.
-
(2015)
Nat. Genet.
, vol.47
, pp. 856-860
-
-
Nelson, M.R.1
Tipney, H.2
Painter, J.L.3
Shen, J.4
Nicoletti, P.5
Shen, Y.6
Floratos, A.7
Sham, P.C.8
Li, M.J.9
Wang, J.10
-
32
-
-
84946081339
-
OMIM.org: Online mendelian inheritance in man (OMIM®), an online catalog of human genes and genetic disorders
-
Amberger, J.S., Bocchini, C.A., Schiettecatte, F., Scott, A.F. and Hamosh, A. (2015) OMIM.org: Online Mendelian Inheritance in Man (OMIM®), an online catalog of human genes and genetic disorders. Nucleic Acids Res., 43, D789-D798.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D789-D798
-
-
Amberger, J.S.1
Bocchini, C.A.2
Schiettecatte, F.3
Scott, A.F.4
Hamosh, A.5
-
33
-
-
84978811202
-
Causal mechanistic regulatory network for glioblastoma deciphered using systems genetics network analysis
-
Plaisier, C.L., O'Brien, S., Bernard, B., Reynolds, S., Simon, Z., Toledo, C.M., Ding, Y., Reiss, D.J., Paddison, P.J., Baliga, N.S. et al. (2016) Causal mechanistic regulatory network for glioblastoma deciphered using systems genetics network analysis. Cell Syst., 3, 172-186.
-
(2016)
Cell Syst.
, vol.3
, pp. 172-186
-
-
Plaisier, C.L.1
O'Brien, S.2
Bernard, B.3
Reynolds, S.4
Simon, Z.5
Toledo, C.M.6
Ding, Y.7
Reiss, D.J.8
Paddison, P.J.9
Baliga, N.S.10
-
34
-
-
84983335825
-
Association study for 26 candidate loci in idiopathic pulmonary fibrosis patients from four european populations
-
Kishore, A., Žižková, V., Kocourková, L., Petrkova, J., Bouros, E., Nunes, H., Lǒstáková, V., Müller-Quernheim, J., Zissel, G., Kolek, V. et al. (2016) Association study for 26 candidate loci in idiopathic pulmonary fibrosis patients from four european populations. Front. Immunol., 7, 274.
-
(2016)
Front. Immunol.
, vol.7
, pp. 274
-
-
Kishore, A.1
Žižková, V.2
Kocourková, L.3
Petrkova, J.4
Bouros, E.5
Nunes, H.6
Lǒstáková, V.7
Müller-Quernheim, J.8
Zissel, G.9
Kolek, V.10
-
35
-
-
84938949340
-
Genetic mutations associated with status epilepticus
-
Bhatnagar, M. and Shorvon, S. (2015) Genetic mutations associated with status epilepticus. Epilepsy Behav., 49, 104-110.
-
(2015)
Epilepsy Behav.
, vol.49
, pp. 104-110
-
-
Bhatnagar, M.1
Shorvon, S.2
-
36
-
-
84949591046
-
CDH1/E-cadherin and solid tumors
-
Abascal, M.F., Besso, M.J., Rosso, M., Mencucci, M.V., Aparicio, E., Szapiro, G., Furlong, L.I. and Vazquez-Levin, M.H. (2016) CDH1/E-cadherin and solid tumors. An updated gene-disease association analysis using bioinformatics tools. Comput. Biol. Chem., 60, 9-20.
-
(2016)
An Updated Gene-disease Association Analysis Using Bioinformatics Tools. Comput. Biol. Chem.
, vol.60
, pp. 9-20
-
-
Abascal, M.F.1
Besso, M.J.2
Rosso, M.3
Mencucci, M.V.4
Aparicio, E.5
Szapiro, G.6
Furlong, L.I.7
Vazquez-Levin, M.H.8
-
37
-
-
85016119798
-
Candidate gene networks and blood biomarkers of methamphetamine-associated psychosis: An integrative RNA-sequencing report
-
Breen, M.S., Uhlmann, A., Nday, C.M., Glatt, S.J., Mitt, M., Metsalpu, A., Stein, D.J. and Illing, N. (2016) Candidate gene networks and blood biomarkers of methamphetamine-associated psychosis: an integrative RNA-sequencing report. Transl. Psychiatry, 6, e802.
-
(2016)
Transl. Psychiatry
, vol.6
, pp. e802
-
-
Breen, M.S.1
Uhlmann, A.2
Nday, C.M.3
Glatt, S.J.4
Mitt, M.5
Metsalpu, A.6
Stein, D.J.7
Illing, N.8
-
38
-
-
84925301428
-
Novel scripts for improved annotation and selection of variants from whole exome sequencing in cancer research
-
Hansen, M.C., Nederby, L., Roug, A., Villesen, P., Kjeldsen, E., Nyvold, C.G. and Hokland, P. (2015) Novel scripts for improved annotation and selection of variants from whole exome sequencing in cancer research. MethodsX, 2, 145-153.
-
(2015)
MethodsX
, vol.2
, pp. 145-153
-
-
Hansen, M.C.1
Nederby, L.2
Roug, A.3
Villesen, P.4
Kjeldsen, E.5
Nyvold, C.G.6
Hokland, P.7
-
39
-
-
84898783004
-
Prioritizing disease-linked variants, genes, and pathways with an interactive whole-genome analysis pipeline
-
Lee, I.-H., Lee, K., Hsing, M., Choe, Y., Park, J.-H., Kim, S.H., Bohn, J.M., Neu, M.B., Hwang, K.-B., Green, R.C. et al. (2014) Prioritizing disease-linked variants, genes, and pathways with an interactive whole-genome analysis pipeline. Hum. Mutat., 35, 537-347.
-
(2014)
Hum. Mutat.
, vol.35
, pp. 347-537
-
-
Lee, I.-H.1
Lee, K.2
Hsing, M.3
Choe, Y.4
Park, J.-H.5
Kim, S.H.6
Bohn, J.M.7
Neu, M.B.8
Hwang, K.-B.9
Green, R.C.10
-
40
-
-
84949566963
-
NcPred: NcRNA-disease association prediction through tripartite network-based inference
-
Alaimo, S., Giugno, R. and Pulvirenti, A. (2014) ncPred: ncRNA-disease association prediction through tripartite network-based inference. Front. Bioeng. Biotechnol., 2, 71.
-
(2014)
Front. Bioeng. Biotechnol.
, vol.2
, pp. 71
-
-
Alaimo, S.1
Giugno, R.2
Pulvirenti, A.3
-
41
-
-
84894258048
-
A computational framework to infer human disease-associated long noncoding RNAs
-
Liu, M.-X., Chen, X., Chen, G., Cui, Q.-H. and Yan, G.-Y. (2014) A computational framework to infer human disease-associated long noncoding RNAs. PLoS One, 9, e84408.
-
(2014)
PLoS One
, vol.9
, pp. e84408
-
-
Liu, M.-X.1
Chen, X.2
Chen, G.3
Cui, Q.-H.4
Yan, G.-Y.5
-
42
-
-
84962821803
-
DbAARD & AGP: A computational pipeline for the prediction of genes associated with age related disorders
-
Srivastava, I., Gahlot, L.K., Khurana, P. and Hasija, Y. (2016) dbAARD & AGP: A computational pipeline for the prediction of genes associated with age related disorders. J. Biomed. Inform., 60, 153-161.
-
(2016)
J. Biomed. Inform.
, vol.60
, pp. 153-161
-
-
Srivastava, I.1
Gahlot, L.K.2
Khurana, P.3
Hasija, Y.4
-
43
-
-
84964491349
-
Uncovering disease mechanisms through network biology in the era of Next Generation Sequencing
-
Pi ñero, J., Berenstein, A., Gonzalez-Perez, A., Chernomoretz, A. and Furlong, L.I. (2016) Uncovering disease mechanisms through network biology in the era of Next Generation Sequencing. Sci. Rep., 6, 24570.
-
(2016)
Sci. Rep.
, vol.6
, pp. 24570
-
-
Pi Ñero, J.1
Berenstein, A.2
Gonzalez-Perez, A.3
Chernomoretz, A.4
Furlong, L.I.5
-
44
-
-
84976285663
-
Characterization of clinical signs in the human interactome
-
Chagoyen, M. and Pazos, F. (2016) Characterization of clinical signs in the human interactome. Bioinformatics, 32, 1761-1765.
-
(2016)
Bioinformatics
, vol.32
, pp. 1761-1765
-
-
Chagoyen, M.1
Pazos, F.2
-
45
-
-
84911369913
-
Systematic analysis of gene properties influencing organ system phenotypes in mammalian perturbations
-
Vogt, I., Prinz, J., Worf, K. and Campillos, M. (2014) Systematic analysis of gene properties influencing organ system phenotypes in mammalian perturbations. Bioinformatics, 30, 3093-3100.
-
(2014)
Bioinformatics
, vol.30
, pp. 3093-3100
-
-
Vogt, I.1
Prinz, J.2
Worf, K.3
Campillos, M.4
-
46
-
-
84861122386
-
Automatic filtering and substantiation of drug safety signals
-
Bauer-Mehren, A., van Mullingen, E.M., Avillach, P., Carrascosa, M.D.C., Garcia-Serna, R., Pi ñero, J., Singh, B., Lopes, P., Oliveira, J.L., Diallo, G. et al. (2012) Automatic filtering and substantiation of drug safety signals. PLoS Comput. Biol., 8, e1002457.
-
(2012)
PLoS Comput. Biol.
, vol.8
, pp. e1002457
-
-
Bauer-Mehren, A.1
Van Mullingen, E.M.2
Avillach, P.3
Carrascosa, M.D.C.4
Garcia-Serna, R.5
Pi Ñero, J.6
Singh, B.7
Lopes, P.8
Oliveira, J.L.9
Diallo, G.10
-
47
-
-
84991518561
-
An integrated data driven approach to drug repositioning using gene-disease associations
-
Mullen, J., Cockell, S.J., Woollard, P. and Wipat, A. (2016) An integrated data driven approach to drug repositioning using gene-disease associations. PLoS One, 11, e0155811.
-
(2016)
PLoS One
, vol.11
, pp. e0155811
-
-
Mullen, J.1
Cockell, S.J.2
Woollard, P.3
Wipat, A.4
-
48
-
-
84907400402
-
Network medicine analysis of COPD multimorbidities
-
Grosdidier, S., Ferrer, A., Faner, R., Pi ñero, J., Roca, J., Cosío, B., Agustí, A., Gea, J., Sanz, F. and Furlong, L.I. (2014) Network medicine analysis of COPD multimorbidities. Respir. Res., 15, 111.
-
(2014)
Respir. Res.
, vol.15
, pp. 111
-
-
Grosdidier, S.1
Ferrer, A.2
Faner, R.3
Pi Ñero, J.4
Roca, J.5
Cosío, B.6
Agustí, A.7
Gea, J.8
Sanz, F.9
Furlong, L.I.10
-
49
-
-
84943226586
-
Molecular and clinical diseasome of comorbidities in exacerbated COPD patients
-
Faner, R., Gutiérrez-Sacristán, A., Castro-Acosta, A., Grosdidier, S., Gan, W., Sánchez-Mayor, M., Lopez-Campos, J.L., Pozo-Rodriguez, F., Sanz, F., Mannino, D. et al. (2015) Molecular and clinical diseasome of comorbidities in exacerbated COPD patients. Eur. Respir. J., 46, 1001-1010.
-
(2015)
Eur. Respir. J.
, vol.46
, pp. 1001-1010
-
-
Faner, R.1
Gutiérrez-Sacristán, A.2
Castro-Acosta, A.3
Grosdidier, S.4
Gan, W.5
Sánchez-Mayor, M.6
Lopez-Campos, J.L.7
Pozo-Rodriguez, F.8
Sanz, F.9
Mannino, D.10
-
50
-
-
85016230081
-
DTMiner: Identification of potential disease targets through biomedical literature mining
-
Xu, D., Zhang, M., Xie, Y., Wang, F., Chen, M., Zhu, K.Q. and Wei, J. (2016) DTMiner: Identification of potential disease targets through biomedical literature mining. Bioinformatics, doi:10.1093/bioinformatics/btw503.
-
(2016)
Bioinformatics
-
-
Xu, D.1
Zhang, M.2
Xie, Y.3
Wang, F.4
Chen, M.5
Zhu, K.Q.6
Wei, J.7
-
51
-
-
84946054549
-
Organ system heterogeneity DB: A database for the visualization of phenotypes at the organ system level
-
Mannil, D., Vogt, I., Prinz, J. and Campillos, M. (2015) Organ system heterogeneity DB: a database for the visualization of phenotypes at the organ system level. Nucleic Acids Res., 43, D900-D906.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D900-D906
-
-
Mannil, D.1
Vogt, I.2
Prinz, J.3
Campillos, M.4
-
52
-
-
84979851759
-
TFmiR: A web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks
-
Hamed, M., Spaniol, C., Nazarieh, M. and Helms, V. (2015) TFmiR: a web server for constructing and analyzing disease-specific transcription factor and miRNA co-regulatory networks. Nucleic Acids Res., 43, W283-W288.
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. W283-W288
-
-
Hamed, M.1
Spaniol, C.2
Nazarieh, M.3
Helms, V.4
-
53
-
-
84940487903
-
Exploring the cellular basis of human disease through a large-scale mapping of deleterious genes to cell types
-
Cornish, A.J., Filippis, I., David, A. and Sternberg, M.J.E. (2015) Exploring the cellular basis of human disease through a large-scale mapping of deleterious genes to cell types. Genome Med., 7, 95.
-
(2015)
Genome Med.
, vol.7
, pp. 95
-
-
Cornish, A.J.1
Filippis, I.2
David, A.3
Sternberg, M.J.E.4
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