-
1
-
-
57849109058
-
Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
-
Core LJ, Waterfall JJ, Lis JT (2008) Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science 322: 1845-1848.
-
(2008)
Science
, vol.322
, pp. 1845-1848
-
-
Core, L.J.1
Waterfall, J.J.2
Lis, J.T.3
-
2
-
-
33744805985
-
Genome-wide analysis of mammalian promoter architecture and evolution
-
DOI 10.1038/ng1789, PII N1789
-
Carninci P, Sandelin A, Lenhard B, Katayama S, Shimokawa K, et al. (2006) Genome-wide analysis of mammalian promoter architecture and evolution. Nat Genet 38: 626-635. (Pubitemid 43927303)
-
(2006)
Nature Genetics
, vol.38
, Issue.6
, pp. 626-635
-
-
Carninci, P.1
Sandelin, A.2
Lenhard, B.3
Katayama, S.4
Shimokawa, K.5
Ponjavic, J.6
Semple, C.A.M.7
Taylor, M.S.8
Engstrom, P.G.9
Frith, M.C.10
Forrest, A.R.R.11
Alkema, W.B.12
Tan, S.L.13
Plessy, C.14
Kodzius, R.15
Ravasi, T.16
Kasukawa, T.17
Fukuda, S.18
Kanamori-Katayama, M.19
Kitazume, Y.20
Kawaji, H.21
Kai, C.22
Nakamura, M.23
Konno, H.24
Nakano, K.25
Mottagui-Tabar, S.26
Arner, P.27
Chesi, A.28
Gustincich, S.29
Persichetti, F.30
Suzuki, H.31
Grimmond, S.M.32
Wells, C.A.33
Orlando, V.34
Wahlestedt, C.35
Liu, E.T.36
Harbers, M.37
Kawai, J.38
Bajic, V.B.39
Hume, D.A.40
Hayashizaki, Y.41
more..
-
3
-
-
24644505259
-
Fewer genes, more noncoding RNA
-
Claverie JM (2005) Fewer genes, more noncoding RNA. Science 309: 1529-1530.
-
(2005)
Science
, vol.309
, pp. 1529-1530
-
-
Claverie, J.M.1
-
4
-
-
67649671961
-
Long noncoding RNAs: Functional surprises from the RNA world
-
Wilusz JE, Sunwoo H, Spector DL (2009) Long noncoding RNAs: functional surprises from the RNA world. Genes Dev 23: 1494-1504.
-
(2009)
Genes Dev
, vol.23
, pp. 1494-1504
-
-
Wilusz, J.E.1
Sunwoo, H.2
Spector, D.L.3
-
5
-
-
34250160256
-
RNA maps reveal new RNA classes and a possible function for pervasive transcription
-
DOI 10.1126/science.1138341
-
Kapranov P, Cheng J, Dike S, Nix DA, Duttagupta R, et al. (2007) RNA maps reveal new RNA classes and a possible function for pervasive transcription. Science 316: 1484-1488. (Pubitemid 46906616)
-
(2007)
Science
, vol.316
, Issue.5830
, pp. 1484-1488
-
-
Kapranov, P.1
Cheng, J.2
Dike, S.3
Nix, D.A.4
Duttagupta, R.5
Willingham, A.T.6
Stadler, P.F.7
Hertel, J.8
Hackermuller, J.9
Hofacker, I.L.10
Bell, I.11
Cheung, E.12
Drenkow, J.13
Dumais, E.14
Patel, S.15
Helt, G.16
Ganesh, M.17
Ghosh, S.18
Piccolboni, A.19
Sementchenko, V.20
Tammana, H.21
Gingeras, T.R.22
more..
-
6
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
DOI 10.1038/35057062
-
Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, et al. (2001) Initial sequencing and analysis of the human genome. Nature 409: 860-921. (Pubitemid 32165345)
-
(2001)
Nature
, vol.409
, Issue.6822
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
Fitzhugh, W.10
Funke, R.11
Gage, D.12
Harris, K.13
Heaford, A.14
Howland, J.15
Kann, L.16
Lehoczky, J.17
Levine, R.18
McEwan, P.19
McKernan, K.20
Meldrim, J.21
Mesirov, J.P.22
Miranda, C.23
Morris, W.24
Naylor, J.25
Raymond, C.26
Rosetti, M.27
Santos, R.28
Sheridan, A.29
Sougnez, C.30
Stange-Thomann, N.31
Stojanovic, N.32
Subramanian, A.33
Wyman, D.34
Rogers, J.35
Sulston, J.36
Ainscough, R.37
Beck, S.38
Bentley, D.39
Burton, J.40
Clee, C.41
Carter, N.42
Coulson, A.43
Deadman, R.44
Deloukas, P.45
Dunham, A.46
Dunham, I.47
Durbin, R.48
French, L.49
Grafham, D.50
Gregory, S.51
Hubbard, T.52
Humphray, S.53
Hunt, A.54
Jones, M.55
Lloyd, C.56
McMurray, A.57
Matthews, L.58
Mercer, S.59
Milne, S.60
Mullikin, J.C.61
Mungall, A.62
Plumb, R.63
Ross, M.64
Shownkeen, R.65
Sims, S.66
Waterston, R.H.67
Wilson, R.K.68
Hillier, L.W.69
McPherson, J.D.70
Marra, M.A.71
Mardis, E.R.72
Fulton, L.A.73
Chinwalla, A.T.74
Pepin, K.H.75
Gish, W.R.76
Chissoe, S.L.77
Wendl, M.C.78
Delehaunty, K.D.79
Miner, T.L.80
Delehaunty, A.81
Kramer, J.B.82
Cook, L.L.83
Fulton, R.S.84
Johnson, D.L.85
Minx, P.J.86
Clifton, S.W.87
Hawkins, T.88
Branscomb, E.89
Predki, P.90
Richardson, P.91
Wenning, S.92
Slezak, T.93
Doggett, N.94
Cheng, J.-F.95
Olsen, A.96
Lucas, S.97
Elkin, C.98
Uberbacher, E.99
more..
-
7
-
-
78649339069
-
Long noncoding RNA in genome regulation: Prospects and mechanisms
-
Hung T, Chang HY (2010) Long noncoding RNA in genome regulation: Prospects and mechanisms. RNA Biology 7: 582-585.
-
(2010)
RNA Biology
, vol.7
, pp. 582-585
-
-
Hung, T.1
Chang, H.Y.2
-
8
-
-
34250305146
-
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
-
DOI 10.1038/nature05874, PII NATURE05874
-
Birney E, Stamatoyannopoulos JA, Dutta A, Guigo R, Gingeras TR, et al. (2007) Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. Nature 447: 799-816. (Pubitemid 46920138)
-
(2007)
Nature
, vol.447
, Issue.7146
, pp. 799-816
-
-
Birney, E.1
Stamatoyannopoulos, J.A.2
Dutta, A.3
Guigo, R.4
Gingeras, T.R.5
Margulies, E.H.6
Weng, Z.7
Snyder, M.8
Dermitzakis, E.T.9
Thurman, R.E.10
Kuehn, M.S.11
Taylor, C.M.12
Neph, S.13
Koch, C.M.14
Asthana, S.15
Malhotra, A.16
Adzhubei, I.17
Greenbaum, J.A.18
Andrews, R.M.19
Flicek, P.20
Boyle, P.J.21
Cao, H.22
Carter, N.P.23
Clelland, G.K.24
Davis, S.25
Day, N.26
Dhami, P.27
Dillon, S.C.28
Dorschner, M.O.29
Fiegler, H.30
Giresi, P.G.31
Goldy, J.32
Hawrylycz, M.33
Haydock, A.34
Humbert, R.35
James, K.D.36
Johnson, B.E.37
Johnson, E.M.38
Frum, T.T.39
Rosenzweig, E.R.40
Karnani, N.41
Lee, K.42
Lefebvre, G.C.43
Navas, P.A.44
Neri, F.45
Parker, S.C.J.46
Sabo, P.J.47
Sandstrom, R.48
Shafer, A.49
Vetrie, D.50
Weaver, M.51
Wilcox, S.52
Yu, M.53
Collins, F.S.54
Dekker, J.55
Lieb, J.D.56
Tullius, T.D.57
Crawford, G.E.58
Sunyaev, S.59
Noble, W.S.60
Dunham, I.61
Denoeud, F.62
Reymond, A.63
Kapranov, P.64
Rozowsky, J.65
Zheng, D.66
Castelo, R.67
Frankish, A.68
Harrow, J.69
Ghosh, S.70
Sandelin, A.71
Hofacker, I.L.72
Baertsch, R.73
Keefe, D.74
Dike, S.75
Cheng, J.76
Hirsch, H.A.77
Sekinger, E.A.78
Lagarde, J.79
Abril, J.F.80
Shahab, A.81
Flamm, C.82
Fried, C.83
Hackermuller, J.84
Hertel, J.85
Lindemeyer, M.86
Missal, K.87
Tanzer, A.88
Washietl, S.89
Korbel, J.90
Emanuelsson, O.91
Pedersen, J.S.92
Holroyd, N.93
Taylor, R.94
Swarbreck, D.95
Matthews, N.96
Dickson, M.C.97
Thomas, D.J.98
Weirauch, M.T.99
more..
-
9
-
-
81355142141
-
Non-coding RNAs in human disease
-
Esteller M (2011) Non-coding RNAs in human disease. Nat Rev Genet 12: 861-874.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 861-874
-
-
Esteller, M.1
-
10
-
-
73949085491
-
Non-coding RNAs: Regulators of disease
-
Taft RJ, Pang KC, Mercer TR, Dinger M, Mattick JS (2010) Non-coding RNAs: regulators of disease. J Pathol 220: 126-139.
-
(2010)
J Pathol
, vol.220
, pp. 126-139
-
-
Taft, R.J.1
Pang, K.C.2
Mercer, T.R.3
Dinger, M.4
Mattick, J.S.5
-
11
-
-
79957840356
-
Long noncoding RNAs and human disease
-
Wapinski O, Chang HY (2011) Long noncoding RNAs and human disease. Trends Cell Biol 21: 354-361.
-
(2011)
Trends Cell Biol
, vol.21
, pp. 354-361
-
-
Wapinski, O.1
Chang, H.Y.2
-
12
-
-
78651325932
-
lncRNAdb: A reference database for long noncoding RNAs
-
Amaral PP, Clark MB, Gascoigne DK, Dinger ME, Mattick JS (2011) lncRNAdb: a reference database for long noncoding RNAs. Nucleic Acids Res 39: D146-151.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Amaral, P.P.1
Clark, M.B.2
Gascoigne, D.K.3
Dinger, M.E.4
Mattick, J.S.5
-
13
-
-
84860742355
-
NONCODE v3.0: Integrative annotation of long noncoding RNAs
-
Bu D, Yu K, Sun S, Xie C, Skogerbo G, et al. (2012) NONCODE v3.0: integrative annotation of long noncoding RNAs. Nucleic Acids Res 40: D210-215.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Bu, D.1
Yu, K.2
Sun, S.3
Xie, C.4
Skogerbo, G.5
-
15
-
-
84876125829
-
LncRNADisease: A database for long-non-coding RNA-associated diseases
-
Chen G, Wang Z, Wang D, Qiu C, Liu M, et al. (2013) LncRNADisease: a database for long-non-coding RNA-associated diseases. Nucleic Acids Res 41: D983-986.
-
(2013)
Nucleic Acids Res
, vol.41
-
-
Chen, G.1
Wang, Z.2
Wang, D.3
Qiu, C.4
Liu, M.5
-
16
-
-
77951118936
-
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
-
Gupta RA, Shah N, Wang KC, Kim J, Horlings HM, et al. (2010) Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis. Nature 464: 1071-1076.
-
(2010)
Nature
, vol.464
, pp. 1071-1076
-
-
Gupta, R.A.1
Shah, N.2
Wang, K.C.3
Kim, J.4
Horlings, H.M.5
-
17
-
-
65549155761
-
A transcriptional sketch of a primary human breast cancer by 454 deep sequencing
-
Guffanti A, Iacono M, Pelucchi P, Kim N, Solda G, et al. (2009) A transcriptional sketch of a primary human breast cancer by 454 deep sequencing. BMC Genomics 10: 163.
-
(2009)
BMC Genomics
, vol.10
, pp. 163
-
-
Guffanti, A.1
Iacono, M.2
Pelucchi, P.3
Kim, N.4
Solda, G.5
-
18
-
-
34548230885
-
Ultraconserved Regions Encoding ncRNAs Are Altered in Human Leukemias and Carcinomas
-
DOI 10.1016/j.ccr.2007.07.027, PII S1535610807002346
-
Calin GA, Liu CG, Ferracin M, Hyslop T, Spizzo R, et al. (2007) Ultraconserved regions encoding ncRNAs are altered in human leukemias and carcinomas. Cancer Cell 12: 215-229. (Pubitemid 47333418)
-
(2007)
Cancer Cell
, vol.12
, Issue.3
, pp. 215-229
-
-
Calin, G.A.1
Liu, C.-g.2
Ferracin, M.3
Hyslop, T.4
Spizzo, R.5
Sevignani, C.6
Fabbri, M.7
Cimmino, A.8
Lee, E.J.9
Wojcik, S.E.10
Shimizu, M.11
Tili, E.12
Rossi, S.13
Taccioli, C.14
Pichiorri, F.15
Liu, X.16
Zupo, S.17
Herlea, V.18
Gramantieri, L.19
Lanza, G.20
Alder, H.21
Rassenti, L.22
Volinia, S.23
Schmittgen, T.D.24
Kipps, T.J.25
Negrini, M.26
Croce, C.M.27
more..
-
19
-
-
63849156246
-
A myelopoiesis-associated regulatory intergenic noncoding RNA transcript within the human HOXA cluster
-
Zhang X, Lian Z, Padden C, Gerstein MB, Rozowsky J, et al. (2009) A myelopoiesis-associated regulatory intergenic noncoding RNA transcript within the human HOXA cluster. Blood 113: 2526-2534.
-
(2009)
Blood
, vol.113
, pp. 2526-2534
-
-
Zhang, X.1
Lian, Z.2
Padden, C.3
Gerstein, M.B.4
Rozowsky, J.5
-
20
-
-
0036122682
-
Cloning of the mRNA of overexpression in colon carcinoma-1: A sequence overexpressed in a subset of colon carcinomas
-
DOI 10.1016/S0165-4608(01)00634-3, PII S0165460801006343
-
Pibouin L, Villaudy J, Ferbus D, Muleris M, Prosperi MT, et al. (2002) Cloning of the mRNA of overexpression in colon carcinoma-1: a sequence overexpressed in a subset of colon carcinomas. Cancer Genet Cytogenet 133: 55-60. (Pubitemid 34224876)
-
(2002)
Cancer Genetics and Cytogenetics
, vol.133
, Issue.1
, pp. 55-60
-
-
Pibouin, L.1
Villaudy, J.2
Ferbus, D.3
Muleris, M.4
Prosperi, M.-T.5
Remvikos, Y.6
Goubin, G.7
-
21
-
-
78650200618
-
Association of a novel long non-coding RNA in 8q24 with prostate cancer susceptibility
-
Chung S, Nakagawa H, Uemura M, Piao L, Ashikawa K, et al. (2011) Association of a novel long non-coding RNA in 8q24 with prostate cancer susceptibility. Cancer Sci 102: 245-252.
-
(2011)
Cancer Sci
, vol.102
, pp. 245-252
-
-
Chung, S.1
Nakagawa, H.2
Uemura, M.3
Piao, L.4
Ashikawa, K.5
-
22
-
-
46749083733
-
Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase
-
Faghihi MA, Modarresi F, Khalil AM, Wood DE, Sahagan BG, et al. (2008) Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase. Nat Med 14: 723-730.
-
(2008)
Nat Med
, vol.14
, pp. 723-730
-
-
Faghihi, M.A.1
Modarresi, F.2
Khalil, A.M.3
Wood, D.E.4
Sahagan, B.G.5
-
23
-
-
21244447111
-
Identification and characterization of a novel, psoriasis susceptibility-related noncoding RNA gene, PRINS
-
DOI 10.1074/jbc.M501704200
-
Sonkoly E, Bata-Csorgo Z, Pivarcsi A, Polyanka H, Kenderessy-Szabo A, et al. (2005) Identification and characterization of a novel, psoriasis susceptibility-related noncoding RNA gene, PRINS. J Biol Chem 280: 24159-24167. (Pubitemid 40884904)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.25
, pp. 24159-24167
-
-
Sonkoly, E.1
Bata-Csorgo, Z.2
Pivarcsi, A.3
Polyanka, H.4
Kenderessy-Szabo, A.5
Molnar, G.6
Szentpali, K.7
Bari, L.8
Megyeri, K.9
Mandi, Y.10
Dobozy, A.11
Kemeny, L.12
Szell, M.13
-
24
-
-
84855249252
-
Oncolytic plasmid: A novel strategy for tumor immuno-gene therapy
-
Yoshihara C, Hamada K, Kuroda M, Koyama Y (2012) Oncolytic plasmid: A novel strategy for tumor immuno-gene therapy. Oncol Lett 3: 387-390.
-
(2012)
Oncol Lett
, vol.3
, pp. 387-390
-
-
Yoshihara, C.1
Hamada, K.2
Kuroda, M.3
Koyama, Y.4
-
25
-
-
84855210874
-
High-dose toremifene as first-line treatment of metastatic breast cancer resistant to adjuvant aromatase inhibitor: A multicenter phase II study
-
Sawaki M, Wada M, Sato Y, Mizuno Y, Kobayashi H, et al. (2012) High-dose toremifene as first-line treatment of metastatic breast cancer resistant to adjuvant aromatase inhibitor: A multicenter phase II study. Oncol Lett 3: 61-65.
-
(2012)
Oncol Lett
, vol.3
, pp. 61-65
-
-
Sawaki, M.1
Wada, M.2
Sato, Y.3
Mizuno, Y.4
Kobayashi, H.5
-
26
-
-
84859916889
-
The relationship between glycogen synthase kinase-3 beta (GSK3B) -50T/C -1727A/T polymorphisms and alcoholism
-
Yoshihara E, Aoki J, Kurihara K, Numajiri M, Iwahashi K (2011) The relationship between glycogen synthase kinase-3 beta (GSK3B) -50T/C -1727A/T polymorphisms and alcoholism. Nihon Arukoru Yakubutsu Igakkai Zasshi 46: 570-575.
-
(2011)
Nihon Arukoru Yakubutsu Igakkai Zasshi
, vol.46
, pp. 570-575
-
-
Yoshihara, E.1
Aoki, J.2
Kurihara, K.3
Numajiri, M.4
Iwahashi, K.5
-
27
-
-
81355161481
-
Genetic visualization of the secondary olfactory pathway in Tbx21 transgenic mice
-
Mitsui S, Igarashi KM, Mori K, Yoshihara Y (2011) Genetic visualization of the secondary olfactory pathway in Tbx21 transgenic mice. Neural Syst Circuits 1: 5.
-
(2011)
Neural Syst Circuits
, vol.1
, pp. 5
-
-
Mitsui, S.1
Igarashi, K.M.2
Mori, K.3
Yoshihara, Y.4
-
28
-
-
83455233852
-
Bioconversion of proposed precursors into theobroxide and related compounds
-
Li P, Takahashi K, Elkhateeb A, Matsuura H, Yoshihara T, et al. (2011) Bioconversion of proposed precursors into theobroxide and related compounds. Nat Prod Commun 6: 1801-1804.
-
(2011)
Nat Prod Commun
, vol.6
, pp. 1801-1804
-
-
Li, P.1
Takahashi, K.2
Elkhateeb, A.3
Matsuura, H.4
Yoshihara, T.5
-
29
-
-
84856376294
-
Relations of serum ascorbic acid and alpha-tocopherol to periodontal disease
-
Iwasaki M, Manz MC, Taylor GW, Yoshihara A, Miyazaki H (2012) Relations of serum ascorbic acid and alpha-tocopherol to periodontal disease. J Dent Res 91: 167-172.
-
(2012)
J Dent Res
, vol.91
, pp. 167-172
-
-
Iwasaki, M.1
Manz, M.C.2
Taylor, G.W.3
Yoshihara, A.4
Miyazaki, H.5
-
30
-
-
84855415247
-
Thioredoxin binding protein (TBP)-2/Txnip and alpha-arrestin proteins in cancer and diabetes mellitus
-
Masutani H, Yoshihara E, Masaki S, Chen Z, Yodoi J (2012) Thioredoxin binding protein (TBP)-2/Txnip and alpha-arrestin proteins in cancer and diabetes mellitus. J Clin Biochem Nutr 50: 23-34.
-
(2012)
J Clin Biochem Nutr
, vol.50
, pp. 23-34
-
-
Masutani, H.1
Yoshihara, E.2
Masaki, S.3
Chen, Z.4
Yodoi, J.5
-
31
-
-
84856119957
-
Elaborate color patterns of individual chicken feathers may be formed by the agouti signaling protein
-
Yoshihara C, Fukao A, Ando K, Tashiro Y, Taniuchi S, et al. (2012) Elaborate color patterns of individual chicken feathers may be formed by the agouti signaling protein. Gen Comp Endocrinol 175: 495-499.
-
(2012)
Gen Comp Endocrinol
, vol.175
, pp. 495-499
-
-
Yoshihara, C.1
Fukao, A.2
Ando, K.3
Tashiro, Y.4
Taniuchi, S.5
-
32
-
-
84857716200
-
WZ4002, a third-generation EGFR inhibitor, can overcome anoikis resistance in EGFR-mutant lung adenocarcinomas more efficiently than Src inhibitors
-
Sakuma Y, Yamazaki Y, Nakamura Y, Yoshihara M, Matsukuma S, et al. (2012) WZ4002, a third-generation EGFR inhibitor, can overcome anoikis resistance in EGFR-mutant lung adenocarcinomas more efficiently than Src inhibitors. Lab Invest 92: 371-383.
-
(2012)
Lab Invest
, vol.92
, pp. 371-383
-
-
Sakuma, Y.1
Yamazaki, Y.2
Nakamura, Y.3
Yoshihara, M.4
Matsukuma, S.5
-
33
-
-
84855676909
-
Alteration in the plasma concentration of a DAAO inhibitor, 3-methylpyrazole-5-carboxylic acid, in the ketamine-treated rats and the influence on the pharmacokinetics of plasma D-tryptophan
-
Haruta N, Iizuka H, Ishii K, Yoshihara S, Ichiba H, et al. (2011) Alteration in the plasma concentration of a DAAO inhibitor, 3-methylpyrazole-5- carboxylic acid, in the ketamine-treated rats and the influence on the pharmacokinetics of plasma D-tryptophan. Proc Jpn Acad Ser B Phys Biol Sci 87: 641-648.
-
(2011)
Proc Jpn Acad Ser B Phys Biol Sci
, vol.87
, pp. 641-648
-
-
Haruta, N.1
Iizuka, H.2
Ishii, K.3
Yoshihara, S.4
Ichiba, H.5
-
34
-
-
78651390167
-
Long Intergenic Noncoding RNAs: New Links in Cancer Progression
-
Tsai MC, Spitale RC, Chang HY (2011) Long Intergenic Noncoding RNAs: New Links in Cancer Progression. Cancer Research 71: 3-7.
-
(2011)
Cancer Research
, vol.71
, pp. 3-7
-
-
Tsai, M.C.1
Spitale, R.C.2
Chang, H.Y.3
-
35
-
-
33746805737
-
-
2004-Karolchik-D493-6.pdf
-
〈Nucl. Acids Res.-2004-Karolchik-D493-6.pdf〉.
-
Nucl. Acids Res.
-
-
-
36
-
-
0347755531
-
The UCSC table browser data retrieval tool
-
Karolchik D, Hinrichs AS, Furey TS, Roskin KM, Sugnet CW, et al. (2004) The UCSC Table Browser data retrieval tool. Nucleic Acids Res 32: D493-496. (Pubitemid 38081706)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.DATABASE ISS.
-
-
Karolchik, D.1
Hinricks, A.S.2
Furey, T.S.3
Roskin, K.M.4
Sugnet, C.W.5
Haussler, D.6
Kent, W.J.7
-
37
-
-
11144358198
-
A gene atlas of the mouse and human protein-encoding transcriptomes
-
DOI 10.1073/pnas.0400782101
-
Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al. (2004) A gene atlas of the mouse and human protein-encoding transcriptomes. Proc Natl Acad Sci U S A 101: 6062-6067. (Pubitemid 38520528)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.16
, pp. 6062-6067
-
-
Su, A.I.1
Wiltshire, T.2
Batalov, S.3
Lapp, H.4
Ching, K.A.5
Block, D.6
Zhang, J.7
Soden, R.8
Hayakawa, M.9
Kreiman, G.10
Cooke, M.P.11
Walker, J.R.12
Hogenesch, J.B.13
-
38
-
-
78149236787
-
DisGeNET: A Cytoscape plugin to visualize, integrate, search and analyze gene-disease networks
-
Bauer-Mehren A, Rautschka M, Sanz F, Furlong LI (2010) DisGeNET: a Cytoscape plugin to visualize, integrate, search and analyze gene-disease networks. Bioinformatics 26: 2924-2926.
-
(2010)
Bioinformatics
, vol.26
, pp. 2924-2926
-
-
Bauer-Mehren, A.1
Rautschka, M.2
Sanz, F.3
Furlong, L.I.4
-
39
-
-
79958795334
-
Gene-disease network analysis reveals functional modules in mendelian, complex and environmental diseases
-
Bauer-Mehren A, Bundschus M, Rautschka M, Mayer MA, Sanz F, et al. (2011) Gene-disease network analysis reveals functional modules in mendelian, complex and environmental diseases. PLoS One 6: e20284.
-
(2011)
PLoS One
, vol.6
-
-
Bauer-Mehren, A.1
Bundschus, M.2
Rautschka, M.3
Mayer, M.A.4
Sanz, F.5
-
40
-
-
9144232912
-
UniProt: The universal protein knowledgebase
-
Apweiler R, Bairoch A, Wu CH, Barker WC, Boeckmann B, et al. (2004) UniProt: the Universal Protein knowledgebase. Nucleic Acids Res 32: D115-119. (Pubitemid 38081617)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.DATABASE ISS.
-
-
Apweiler, R.1
Bairoch, A.2
Wu, C.H.3
Barker, W.C.4
Boeckmann, B.5
Ferro, S.6
Gasteiger, E.7
Huang, H.8
Lopez, R.9
Magrane, M.10
Martin, M.J.11
Natale, D.A.12
O'Donovan, C.13
Redaschi, N.14
Yeh, L.-S.L.15
-
41
-
-
33748502967
-
The Comparative Toxicogenomics Database (CTD): A resource for comparative toxicological studies
-
DOI 10.1002/jez.a.307
-
Mattingly CJ, Rosenstein MC, Colby GT, Forrest JN Jr, Boyer JL (2006) The Comparative Toxicogenomics Database (CTD): a resource for comparative toxicological studies. J Exp Zool A Comp Exp Biol 305: 689-692. (Pubitemid 44358296)
-
(2006)
Journal of Experimental Zoology Part A: Comparative Experimental Biology
, vol.305
, Issue.9
, pp. 689-692
-
-
Mattingly, C.J.1
Rosenstein, M.C.2
Colby, G.T.3
Forrest Jr., J.N.4
Boyer, J.L.5
-
43
-
-
84859727275
-
The Mouse Genome Database (MGD): Comprehensive resource for genetics and genomics of the laboratory mouse
-
Eppig JT, Blake JA, Bult CJ, Kadin JA, Richardson JE, et al. (2012) The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse. Nucleic Acids Res 40: D881-886.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Eppig, J.T.1
Blake, J.A.2
Bult, C.J.3
Kadin, J.A.4
Richardson, J.E.5
-
45
-
-
20144376345
-
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification
-
DOI 10.1093/bioinformatics/bti042
-
Yanai I, Benjamin H, Shmoish M, Chalifa-Caspi V, Shklar M, et al. (2005) Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification. Bioinformatics 21: 650-659. (Pubitemid 40424791)
-
(2005)
Bioinformatics
, vol.21
, Issue.5
, pp. 650-659
-
-
Yanai, I.1
Benjamin, H.2
Shmoish, M.3
Chalifa-Caspi, V.4
Shklar, M.5
Ophir, R.6
Bar-Even, A.7
Horn-Saban, S.8
Safran, M.9
Domany, E.10
Lancet, D.11
Shmueli, O.12
-
46
-
-
54849408182
-
An analysis of human microRNA and disease associations
-
Lu M, Zhang Q, Deng M, Miao J, Guo Y, et al. (2008) An analysis of human microRNA and disease associations. PLoS One 3: e3420.
-
(2008)
PLoS One
, vol.3
-
-
Lu, M.1
Zhang, Q.2
Deng, M.3
Miao, J.4
Guo, Y.5
-
47
-
-
77953915915
-
Regulation of microRNA expression and abundance during lymphopoiesis
-
Kuchen S, Resch W, Yamane A, Kuo N, Li Z, et al. (2010) Regulation of microRNA expression and abundance during lymphopoiesis. Immunity 32: 828-839.
-
(2010)
Immunity
, vol.32
, pp. 828-839
-
-
Kuchen, S.1
Resch, W.2
Yamane, A.3
Kuo, N.4
Li, Z.5
-
48
-
-
65949124261
-
Non-small cell lung cancer exhibits transcript overexpression of genes associated with homologous recombination and DNA replication pathways
-
Saviozzi S, Ceppi P, Novello S, Ghio P, Lo Iacono M, et al. (2009) Non-small cell lung cancer exhibits transcript overexpression of genes associated with homologous recombination and DNA replication pathways. Cancer Res 69: 3390-3396.
-
(2009)
Cancer Res
, vol.69
, pp. 3390-3396
-
-
Saviozzi, S.1
Ceppi, P.2
Novello, S.3
Ghio, P.4
Lo Iacono, M.5
-
49
-
-
6344241652
-
Conservation and coevolution in the scale-free human gene coexpression network
-
DOI 10.1093/molbev/msh222
-
Jordan IK, Marino-Ramirez L, Wolf YI, Koonin EV (2004) Conservation and coevolution in the scale-free human gene coexpression network. Mol Biol Evol 21: 2058-2070. (Pubitemid 39391982)
-
(2004)
Molecular Biology and Evolution
, vol.21
, Issue.11
, pp. 2058-2070
-
-
Jordan, I.K.1
Marino-Ramirez, L.2
Wolf, Y.I.3
Koonin, E.V.4
-
50
-
-
77955722781
-
Sex-specific gene expression in the BXD mouse liver
-
Gatti DM, Zhao N, Chesler EJ, Bradford BU, Shabalin AA, et al. (2010) Sex-specific gene expression in the BXD mouse liver. Physiol Genomics 42: 456-468.
-
(2010)
Physiol Genomics
, vol.42
, pp. 456-468
-
-
Gatti, D.M.1
Zhao, N.2
Chesler, E.J.3
Bradford, B.U.4
Shabalin, A.A.5
-
51
-
-
78650943866
-
Germline copy number variations in BRCA1-associated ovarian cancer patients
-
Yoshihara K, Tajima A, Adachi S, Quan J, Sekine M, et al. (2011) Germline copy number variations in BRCA1-associated ovarian cancer patients. Genes Chromosomes Cancer 50: 167-177.
-
(2011)
Genes Chromosomes Cancer
, vol.50
, pp. 167-177
-
-
Yoshihara, K.1
Tajima, A.2
Adachi, S.3
Quan, J.4
Sekine, M.5
-
52
-
-
84859487429
-
Gene Expression Atlas update-a value-added database of microarray and sequencing-based functional genomics experiments
-
Kapushesky M, Adamusiak T, Burdett T, Culhane A, Farne A, et al. (2012) Gene Expression Atlas update-a value-added database of microarray and sequencing-based functional genomics experiments. Nucleic Acids Res 40: D1077-1081.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Kapushesky, M.1
Adamusiak, T.2
Burdett, T.3
Culhane, A.4
Farne, A.5
|