-
1
-
-
84904250154
-
Sex-biased gene expression and evolution of the X chromosome in nematodes
-
Albritton SE, et al. 2014. Sex-biased gene expression and evolution of the X chromosome in nematodes. Genetics doi: 10.1534/ genetics.114.163311.
-
(2014)
Genetics
-
-
Albritton, S.E.1
-
2
-
-
84928987900
-
HTSeq-a Python framework to work with high-throughput sequencing data
-
Anders S, Pyl PT, Huber W. 2014. HTSeq-a Python framework to work with high-throughput sequencing data. Bioinformatics. 31(2):166-169.
-
(2014)
Bioinformatics
, vol.31
, Issue.2
, pp. 166-169
-
-
Anders, S.1
Pyl, P.T.2
Huber, W.3
-
3
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
Ashburner M, et al. 2000. Gene Ontology: tool for the unification of biology. Nat Genet. 25:25-29.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
-
4
-
-
84856599232
-
Are all sex chromosomes created equal?
-
Bachtrog D, et al. 2011. Are all sex chromosomes created equal? Trends Genet. 27:350-357.
-
(2011)
Trends Genet
, vol.27
, pp. 350-357
-
-
Bachtrog, D.1
-
5
-
-
84905366183
-
Sex determination: Why so many ways of doing it?
-
Bachtrog D, et al. 2014. Sex determination: why so many ways of doing it? PLoS Biol. 12:e1001899.
-
(2014)
PLoS Biol
, vol.12
, pp. e1001899
-
-
Bachtrog, D.1
-
7
-
-
0035875867
-
Dosage-dependent gene regulation in multicellular eukaryotes: Implications for dosage compensation, aneuploid syndromes, and quantitative traits
-
Birchler JA, Bhadra U, Bhadra MP, Auger DL. 2001. Dosage-dependent gene regulation in multicellular eukaryotes: implications for dosage compensation, aneuploid syndromes, and quantitative traits. Dev Biol. 234:275-288.
-
(2001)
Dev Biol
, vol.234
, pp. 275-288
-
-
Birchler, J.A.1
Bhadra, U.2
Bhadra, M.P.3
Auger, D.L.4
-
9
-
-
84866294456
-
Gene balance hypothesis: Connecting issues of dosage sensitivity across biological disciplines
-
Birchler JA, Veitia RA. 2012. Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines. Proc Natl Acad Sci U S A. 109:14746-14753.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 14746-14753
-
-
Birchler, J.A.1
Veitia, R.A.2
-
10
-
-
33745067419
-
The gain and loss of genes during 600 million years of vertebrate evolution
-
Blomme T, et al. 2006. The gain and loss of genes during 600 million years of vertebrate evolution. Genome Biol. 7:R43.
-
(2006)
Genome Biol
, vol.7
, pp. R43
-
-
Blomme, T.1
-
11
-
-
80054976678
-
The evolution of gene expression levels in mammalian organs
-
Brawand D, et al. 2011. The evolution of gene expression levels in mammalian organs. Nature 478:343-348.
-
(2011)
Nature
, vol.478
, pp. 343-348
-
-
Brawand, D.1
-
12
-
-
0012486875
-
Model for evolution of Y chromosomes and dosage compensation
-
Charlesworth B. 1978. Model for evolution of Y chromosomes and dosage compensation. Proc Natl Acad Sci U S A. 75:5618-5622.
-
(1978)
Proc Natl Acad Sci U S A
, vol.75
, pp. 5618-5622
-
-
Charlesworth, B.1
-
13
-
-
0030087880
-
The evolution of chromosomal sex determination and dosage compensation
-
Charlesworth B. 1996. The evolution of chromosomal sex determination and dosage compensation. Curr Biol. 6:149-162.
-
(1996)
Curr Biol
, vol.6
, pp. 149-162
-
-
Charlesworth, B.1
-
14
-
-
0032585575
-
Sex chromosomes: Evolving dosage compensation
-
Charlesworth B. 1998. Sex chromosomes: evolving dosage compensation. Curr Biol. 8:R931-R933.
-
(1998)
Curr Biol
, vol.8
, pp. R931-R933
-
-
Charlesworth, B.1
-
15
-
-
23644455954
-
Steps in the evolution of heteromorphic sex chromosomes
-
Charlesworth D, Charlesworth B, Marais G. 2005. Steps in the evolution of heteromorphic sex chromosomes. Heredity 95:118-128.
-
(2005)
Heredity
, vol.95
, pp. 118-128
-
-
Charlesworth, D.1
Charlesworth, B.2
Marais, G.3
-
16
-
-
84895867400
-
Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle
-
Chen S, et al. 2014. Whole-genome sequence of a flatfish provides insights into ZW sex chromosome evolution and adaptation to a benthic lifestyle. Nat Genet. 46:253-260.
-
(2014)
Nat Genet
, vol.46
, pp. 253-260
-
-
Chen, S.1
-
17
-
-
84855940430
-
Dosage compensation in Drosophila melano-gaster: Epigenetic fine-tuning of chromosome-wide transcription
-
Conrad T, Akhtar A. 2012. Dosage compensation in Drosophila melano-gaster: epigenetic fine-tuning of chromosome-wide transcription. Nat Rev Genet. 13:123-134.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 123-134
-
-
Conrad, T.1
Akhtar, A.2
-
19
-
-
33744822985
-
Widespread genome duplications throughout the history of flowering plants
-
Cui L, et al. 2006. Widespread genome duplications throughout the history of flowering plants. Genome Res. 16:738-749.
-
(2006)
Genome Res
, vol.16
, pp. 738-749
-
-
Cui, L.1
-
20
-
-
84946037477
-
Ensembl 2015
-
Cunningham F, et al. 2015. Ensembl 2015. Nucleic Acids Res. 43:D662-D669.
-
(2015)
Nucleic Acids Res
, vol.43
, pp. D662-D669
-
-
Cunningham, F.1
-
21
-
-
70349665249
-
Unravelling the evolutionary origins of X chromosome inactivation in mammals: Insights from marsupials and monotremes
-
Deakin J, Chaumeil J, Hore T, Marshall Graves J. 2009. Unravelling the evolutionary origins of X chromosome inactivation in mammals: insights from marsupials and monotremes. Chromosome Res. 17:671-685.
-
(2009)
Chromosome Res
, vol.17
, pp. 671-685
-
-
Deakin, J.1
Chaumeil, J.2
Hore, T.3
Marshall Graves, J.4
-
22
-
-
26444603772
-
Two rounds of whole genome duplication in the ancestral vertebrate
-
Dehal P, Boore JL. 2005. Two rounds of whole genome duplication in the ancestral vertebrate. PLoS Biol. 3:e314.
-
(2005)
PLoS Biol
, vol.3
, pp. e314
-
-
Dehal, P.1
Boore, J.L.2
-
23
-
-
70349682921
-
Gene and genome duplications: The impact of dosage-sensitivity on the fate of nuclear genes
-
Edger P, Pires JC. 2009. Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes. Chromosome Res. 17:699-717.
-
(2009)
Chromosome Res
, vol.17
, pp. 699-717
-
-
Edger, P.1
Pires, J.C.2
-
24
-
-
14944384742
-
The avian genome uncovered
-
Ellegren H. 2005. The avian genome uncovered. Trends Ecol Evol. 20:180-186.
-
(2005)
Trends Ecol Evol
, vol.20
, pp. 180-186
-
-
Ellegren, H.1
-
25
-
-
36849094065
-
Faced with inequality: Chicken do not have a general dosage compensation of sex-linked genes
-
Ellegren H, et al. 2007. Faced with inequality: chicken do not have a general dosage compensation of sex-linked genes. BMC Biol. 5:40.
-
(2007)
BMC Biol
, vol.5
, pp. 40
-
-
Ellegren, H.1
-
26
-
-
1642475221
-
Extensive gene traffic on the mammalian X chromosome
-
Emerson JJ, Kaessmann H, Betrán E, Long M. 2004. Extensive gene traffic on the mammalian X chromosome. Science 303:537-540.
-
(2004)
Science
, vol.303
, pp. 537-540
-
-
Emerson, J.J.1
Kaessmann, H.2
Betrán, E.3
Long, M.4
-
27
-
-
85065054029
-
Mechanisms of X chromosome dosage compensation
-
Ercan S. 2015. Mechanisms of X chromosome dosage compensation. J Genomics 3:1-19.
-
(2015)
J Genomics
, vol.3
, pp. 1-19
-
-
Ercan, S.1
-
28
-
-
84900417384
-
Avian sex, sex chromosomes, and dosage compensation in the age of genomics
-
Graves JM. 2014. Avian sex, sex chromosomes, and dosage compensation in the age of genomics. Chromosome Res. 22:45-57.
-
(2014)
Chromosome Res
, vol.22
, pp. 45-57
-
-
Graves, J.M.1
-
29
-
-
10644283823
-
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
-
Hillier LW, et al. 2004. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. Nature 432:695-716.
-
(2004)
Nature
, vol.432
, pp. 695-716
-
-
Hillier, L.W.1
-
30
-
-
34247493236
-
Matplotlib: A 2D graphics environment
-
Hunter JD. 2007. Matplotlib: a 2D graphics environment. Comput Sci Eng. 9:90-95.
-
(2007)
Comput Sci Eng
, vol.9
, pp. 90-95
-
-
Hunter, J.D.1
-
31
-
-
84969295765
-
The constrained maximal expression level owing to haploidy shapes gene content on the mammalian X chromosome
-
Hurst L, Tashakkori Ghanbarian A, Forrest ARR, Huminiecki L. 2015. The constrained maximal expression level owing to haploidy shapes gene content on the mammalian X chromosome. PLoS Biol. 13(12):e1002315.
-
(2015)
PLoS Biol
, vol.13
, Issue.12
, pp. e1002315
-
-
Hurst, L.1
Tashakkori Ghanbarian, A.2
Forrest, A.R.R.3
Huminiecki, L.4
-
32
-
-
33947528380
-
Dosage compensation is less effective in birds than in mammals
-
Itoh Y, et al. 2007. Dosage compensation is less effective in birds than in mammals. J Biol. 6:2.
-
(2007)
J Biol
, vol.6
, pp. 2
-
-
Itoh, Y.1
-
33
-
-
84861541065
-
Mechanisms and evolutionary patterns of mammalian and avian dosage compensation
-
Julien P, et al. 2012. Mechanisms and evolutionary patterns of mammalian and avian dosage compensation. PLoS Biol. 10:e1001328.
-
(2012)
PLoS Biol
, vol.10
, pp. e1001328
-
-
Julien, P.1
-
34
-
-
1942452749
-
Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae
-
Kellis M, Birren BW, Lander ES. 2004. Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae. Nature 428:617-624.
-
(2004)
Nature
, vol.428
, pp. 617-624
-
-
Kellis, M.1
Birren, B.W.2
Lander, E.S.3
-
35
-
-
84876996918
-
TopHat2: Accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
-
Kim D, et al. 2013. TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions. Genome Biol. 14:R36.
-
(2013)
Genome Biol
, vol.14
, pp. R36
-
-
Kim, D.1
-
36
-
-
84863229597
-
VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
-
Koboldt DC, et al. 2012. VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing. Genome Res. 22:568-576.
-
(2012)
Genome Res
, vol.22
, pp. 568-576
-
-
Koboldt, D.C.1
-
37
-
-
84859210032
-
Fast gapped-read alignment with Bowtie 2
-
Langmead B, Salzberg SL. 2012. Fast gapped-read alignment with Bowtie 2. Nat Methods 9:357-359.
-
(2012)
Nat Methods
, vol.9
, pp. 357-359
-
-
Langmead, B.1
Salzberg, S.L.2
-
38
-
-
77953768324
-
Female-biased expression on the X chromosome as a key step in sex chromosome evolution in threespine sticklebacks
-
Leder EH, et al. 2010. Female-biased expression on the X chromosome as a key step in sex chromosome evolution in threespine sticklebacks. Mol Biol Evol. 27:1495-1503.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 1495-1503
-
-
Leder, E.H.1
-
39
-
-
68549104404
-
The sequence alignment/map format and SAMtools
-
Li H, et al. 2009. The sequence alignment/map format and SAMtools. Bioinformatics 25:2078-2079.
-
(2009)
Bioinformatics
, vol.25
, pp. 2078-2079
-
-
Li, H.1
-
40
-
-
84863955476
-
Expression reduction in mammalian X chromosome evolution refutes Ohno's hypothesis of dosage compensation
-
Lin F, Xing K, Zhang J, He X. 2012. Expression reduction in mammalian X chromosome evolution refutes Ohno's hypothesis of dosage compensation. Proc Natl Acad Sci U S A. 109:11752-11757.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 11752-11757
-
-
Lin, F.1
Xing, K.2
Zhang, J.3
He, X.4
-
41
-
-
84880770271
-
Independent evolution of transcriptional inactivation on sex chromosomes in birds and mammals
-
Livernois AM, et al. 2013. Independent evolution of transcriptional inactivation on sex chromosomes in birds and mammals. PLoS Genet. 9:e1003635.
-
(2013)
PLoS Genet
, vol.9
, pp. e1003635
-
-
Livernois, A.M.1
-
42
-
-
84864483625
-
RobiNA: A user-friendly, integrated software solution for RNA-Seq-based transcriptomics
-
Lohse M, et al. 2012. RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics. Nucleic Acids Res. 40:W622-W627.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. W622-W627
-
-
Lohse, M.1
-
43
-
-
63449086872
-
The complex relationship of gene duplication and essentiality
-
Makino T, Hokamp K, McLysaght A. 2009. The complex relationship of gene duplication and essentiality. Trends Genet. 25:152-155.
-
(2009)
Trends Genet
, vol.25
, pp. 152-155
-
-
Makino, T.1
Hokamp, K.2
McLysaght, A.3
-
44
-
-
77952679366
-
Ohnologs in the human genome are dosage balanced and frequently associated with disease
-
Makino T, McLysaght A. 2010. Ohnologs in the human genome are dosage balanced and frequently associated with disease. Proc Natl Acad Sci U S A. 107:9270-9274.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 9270-9274
-
-
Makino, T.1
McLysaght, A.2
-
45
-
-
84859934498
-
Mediation of Drosophila autosomal dosage effects and compensation by network interactions
-
Malone J, et al. 2012. Mediation of Drosophila autosomal dosage effects and compensation by network interactions. Genome Biol. 13:R28.
-
(2012)
Genome Biol
, vol.13
, pp. R28
-
-
Malone, J.1
-
46
-
-
84888136375
-
Sex chromosome dosage compensation: Definitely not for everyone
-
Mank JE. 2013. Sex chromosome dosage compensation: definitely not for everyone. Trends Genet. 29:677-683.
-
(2013)
Trends Genet
, vol.29
, pp. 677-683
-
-
Mank, J.E.1
-
47
-
-
60549110047
-
All dosage compensation is local: Gene-by-gene regulation of sex-biased expression on the chicken Z chromosome
-
Mank JE, Ellegren H. 2008. All dosage compensation is local: gene-by-gene regulation of sex-biased expression on the chicken Z chromosome. Heredity 102:312-320.
-
(2008)
Heredity
, vol.102
, pp. 312-320
-
-
Mank, J.E.1
Ellegren, H.2
-
48
-
-
79960846643
-
Some inconvenient truths about sex chromosome dosage compensation and the potential role of sexual conflict
-
Mank JE, Hosken DJ, Wedell N. 2011. Some inconvenient truths about sex chromosome dosage compensation and the potential role of sexual conflict. Evolution 65:2133-2144.
-
(2011)
Evolution
, vol.65
, pp. 2133-2144
-
-
Mank, J.E.1
Hosken, D.J.2
Wedell, N.3
-
49
-
-
77952240927
-
Targeting X chromosomes for repression
-
Meyer BJ. 2010. Targeting X chromosomes for repression. Curr Opin Genet Dev. 20:179-189.
-
(2010)
Curr Opin Genet Dev
, vol.20
, pp. 179-189
-
-
Meyer, B.J.1
-
50
-
-
84861434684
-
W chromosome expression responds to female-specific selection
-
Moghadam HK, et al. 2012. W chromosome expression responds to female-specific selection. Proc Natl Acad Sci U S A. 109:8207-8211.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 8207-8211
-
-
Moghadam, H.K.1
-
51
-
-
78651369572
-
The sex-biased brain: Sexual dimorphism in gene expression in two species of songbirds
-
Naurin S, et al. 2011. The sex-biased brain: sexual dimorphism in gene expression in two species of songbirds. BMC Genomics 12:37.
-
(2011)
BMC Genomics
, vol.12
, pp. 37
-
-
Naurin, S.1
-
53
-
-
33947127751
-
Origin of avian genome size and structure in non-avian dinosaurs
-
Organ CL, et al. 2007. Origin of avian genome size and structure in non-avian dinosaurs. Nature 446:180-184.
-
(2007)
Nature
, vol.446
, pp. 180-184
-
-
Organ, C.L.1
-
54
-
-
0038157152
-
Dosage sensitivity and the evolution of gene families in yeast
-
Papp B, Pál C, Hurst LD. 2003. Dosage sensitivity and the evolution of gene families in yeast. Nature 424:194-197.
-
(2003)
Nature
, vol.424
, pp. 194-197
-
-
Papp, B.1
Pál, C.2
Hurst, L.D.3
-
55
-
-
34247481878
-
IPython: A system for interactive scientific computing
-
Pérez F, Granger BE. 2007. IPython: a system for interactive scientific computing. Comput Sci Eng. 9:21-29.
-
(2007)
Comput Sci Eng
, vol.9
, pp. 21-29
-
-
Pérez, F.1
Granger, B.E.2
-
56
-
-
84897110549
-
The evolution of X chromosome inactivation in mammals: The demise of Ohno's hypothesis?
-
Pessia E, Engelstädter J, Marais GAB. 2013. The evolution of X chromosome inactivation in mammals: the demise of Ohno's hypothesis? Cell Mol Life Sci. 71(8):1383-1394.
-
(2013)
Cell Mol Life Sci
, vol.71
, Issue.8
, pp. 1383-1394
-
-
Pessia, E.1
Engelstädter, J.2
Marais, G.A.B.3
-
57
-
-
84859448442
-
Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome
-
Pessia E, et al. 2012. Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome. Proc Natl Acad Sci U S A. 109:5346-5351.
-
(2012)
Proc Natl Acad Sci U S A
, vol.109
, pp. 5346-5351
-
-
Pessia, E.1
-
58
-
-
13844250828
-
Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors
-
Pollack JR, et al. 2002. Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors. Proc Natl Acad Sci U S A. 99:12963-12968.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 12963-12968
-
-
Pollack, J.R.1
-
59
-
-
43249118306
-
Chromosomal gene movements reflect the recent origin and biology of therian sex chromosomes
-
Potrzebowski L, et al. 2008. Chromosomal gene movements reflect the recent origin and biology of therian sex chromosomes. PLoS Biol. 6:e80.
-
(2008)
PLoS Biol
, vol.6
, pp. e80
-
-
Potrzebowski, L.1
-
60
-
-
77951770756
-
BEDTools: A flexible suite of utilities for comparing genomic features
-
Quinlan AR, Hall IM. 2010. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26:841-842.
-
(2010)
Bioinformatics
, vol.26
, pp. 841-842
-
-
Quinlan, A.R.1
Hall, I.M.2
-
61
-
-
84907543218
-
Estimates of allele-specific expression in Drosophila with a single genome sequence and RNA-seq data
-
Quinn A, Juneja P, Jiggins FM. 2014. Estimates of allele-specific expression in Drosophila with a single genome sequence and RNA-seq data. Bioinformatics 30:2603-2610.
-
(2014)
Bioinformatics
, vol.30
, pp. 2603-2610
-
-
Quinn, A.1
Juneja, P.2
Jiggins, F.M.3
-
63
-
-
79959923522
-
G:Profiler-a web server for functional interpretation of gene lists (2011 update)
-
Reimand J, Arak T, Vilo J. 2011. g:Profiler-a web server for functional interpretation of gene lists (2011 update). Nucleic Acids Res. 39:W307-W315.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. W307-W315
-
-
Reimand, J.1
Arak, T.2
Vilo, J.3
-
64
-
-
75249087100
-
EdgeR: A Bioconductor package for differential expression analysis of digital gene expression data
-
Robinson MD, McCarthy DJ, Smyth GK. 2010. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26:139-140.
-
(2010)
Bioinformatics
, vol.26
, pp. 139-140
-
-
Robinson, M.D.1
McCarthy, D.J.2
Smyth, G.K.3
-
65
-
-
75549091794
-
CORUM: The comprehensive resource of mammalian protein complexes-2009
-
Ruepp A, et al. 2010. CORUM: the comprehensive resource of mammalian protein complexes-2009. Nucleic Acids Res. 38:D497-D501.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. D497-D501
-
-
Ruepp, A.1
-
66
-
-
84938614149
-
Identification of ohnolog genes originating from whole genome duplication in early vertebrates, based on synteny comparison across multiple genomes
-
Singh PP, Arora J, Isambert H. 2015. Identification of ohnolog genes originating from whole genome duplication in early vertebrates, based on synteny comparison across multiple genomes. PLoS Comput. Biol. 11:e1004394.
-
(2015)
PLoS Comput. Biol.
, vol.11
, pp. e1004394
-
-
Singh, P.P.1
Arora, J.2
Isambert, H.3
-
67
-
-
84881042224
-
Sources of bias in measures of allele-specific expression derived from RNA-seq data aligned to a single reference genome
-
Stevenson K, Coolon J, Wittkopp P. 2013. Sources of bias in measures of allele-specific expression derived from RNA-seq data aligned to a single reference genome. BMC Genomics 14:536.
-
(2013)
BMC Genomics
, vol.14
, pp. 536
-
-
Stevenson, K.1
Coolon, J.2
Wittkopp, P.3
-
68
-
-
33845768982
-
Dosage compensation: The beginning and end of generalization
-
Straub T, Becker PB. 2007. Dosage compensation: the beginning and end of generalization. Nat Rev Genet. 8:47-57.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 47-57
-
-
Straub, T.1
Becker, P.B.2
-
69
-
-
34548131710
-
Effects of aneuploidy on cellular physiology and cell division in haploid yeast
-
Torres EM, et al. 2007. Effects of aneuploidy on cellular physiology and cell division in haploid yeast. Science 317:916-924.
-
(2007)
Science
, vol.317
, pp. 916-924
-
-
Torres, E.M.1
-
70
-
-
84943390118
-
Quantitative mass spectrometry reveals partial translational regulation for dosage compensation in chicken
-
Uebbing S, et al. 2015. Quantitative mass spectrometry reveals partial translational regulation for dosage compensation in chicken. Mol Biol Evol. 32:2716-2725.
-
(2015)
Mol Biol Evol
, vol.32
, pp. 2716-2725
-
-
Uebbing, S.1
-
71
-
-
84891638603
-
Transcriptome sequencing reveals the character of incomplete dosage compensation across multiple tissues in flycatchers
-
Uebbing S, Künstner A, Mäkinen H, Ellegren H. 2013. Transcriptome sequencing reveals the character of incomplete dosage compensation across multiple tissues in flycatchers. Genome Biol Evol. 5:1555-1566.
-
(2013)
Genome Biol Evol
, vol.5
, pp. 1555-1566
-
-
Uebbing, S.1
Künstner, A.2
Mäkinen, H.3
Ellegren, H.4
-
72
-
-
70349325524
-
The evolutionary significance of ancient genome duplications
-
Van de Peer Y, Maere S, Meyer A. 2009. The evolutionary significance of ancient genome duplications. Nat Rev Genet. 10:725-732.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 725-732
-
-
Van De Peer, Y.1
Maere, S.2
Meyer, A.3
-
73
-
-
5144234337
-
Gene dosage balance in cellular pathways: Implications for dominance and gene duplicability
-
Veitia RA. 2004. Gene dosage balance in cellular pathways: implications for dominance and gene duplicability. Genetics 168:569-574.
-
(2004)
Genetics
, vol.168
, pp. 569-574
-
-
Veitia, R.A.1
-
74
-
-
84928230861
-
X chromosome inactivation and active X upregulation in therian mammals: Facts, questions, and hypotheses
-
Veitia RA, Veyrunes F, Bottani S, Birchler JA. 2015. X chromosome inactivation and active X upregulation in therian mammals: facts, questions, and hypotheses. J Mol Cell Biol. 7:2-11.
-
(2015)
J Mol Cell Biol
, vol.7
, pp. 2-11
-
-
Veitia, R.A.1
Veyrunes, F.2
Bottani, S.3
Birchler, J.A.4
-
75
-
-
66049085185
-
General gene movement off the X chromosome in the Drosophila genus
-
Vibranovski MD, Zhang Y, Long M. 2009. General gene movement off the X chromosome in the Drosophila genus. Genome Res. 19:897-903.
-
(2009)
Genome Res
, vol.19
, pp. 897-903
-
-
Vibranovski, M.D.1
Zhang, Y.2
Long, M.3
-
76
-
-
84883197915
-
Comparative sex chromosome genomics in snakes: Differentiation, evolutionary strata, and lack of global dosage compensation
-
Vicoso B, et al. 2013. Comparative sex chromosome genomics in snakes: differentiation, evolutionary strata, and lack of global dosage compensation. PLoS Biol. 11:e1001643.
-
(2013)
PLoS Biol
, vol.11
, pp. e1001643
-
-
Vicoso, B.1
-
77
-
-
84929484746
-
Numerous transitions of sex chromosomes in diptera
-
Vicoso B, Bachtrog D. 2015. Numerous transitions of sex chromosomes in diptera. PLoS Biol. 13:e1002078.
-
(2015)
PLoS Biol
, vol.13
, pp. e1002078
-
-
Vicoso, B.1
Bachtrog, D.2
-
78
-
-
84982175002
-
Purifying selection maintains dosage-sensitive genes during degeneration of the threespine stickleback Y chromosome
-
White MA, Kitano J, Peichel CL. 2015. Purifying selection maintains dosage-sensitive genes during degeneration of the threespine stickleback Y chromosome. Mol Biol Evol. 32:1981-1995.
-
(2015)
Mol Biol Evol
, vol.32
, pp. 1981-1995
-
-
White, M.A.1
Kitano, J.2
Peichel, C.L.3
-
79
-
-
79351469684
-
General lack of global dosage compensation in ZZ/ZW systems? Broadening the perspective with RNA-seq
-
Wolf J, Bryk J. 2011. General lack of global dosage compensation in ZZ/ZW systems? Broadening the perspective with RNA-seq. BMC Genomics 12:91.
-
(2011)
BMC Genomics
, vol.12
, pp. 91
-
-
Wolf, J.1
Bryk, J.2
-
80
-
-
0034020782
-
Robustness-it's not where you think it is
-
Wolfe K. 2000. Robustness-it's not where you think it is. Nat Genet. 25:3-4.
-
(2000)
Nat Genet
, vol.25
, pp. 3-4
-
-
Wolfe, K.1
-
81
-
-
0035344021
-
Yesterday's polyploids and the mystery of diploidization
-
Wolfe KH. 2001. Yesterday's polyploids and the mystery of diploidization. Nat Rev Genet. 2:333-341.
-
(2001)
Nat Rev Genet
, vol.2
, pp. 333-341
-
-
Wolfe, K.H.1
-
82
-
-
0030947344
-
Molecular evidence for an ancient duplication of the entire yeast genome
-
Wolfe KH, Shields DC. 1997. Molecular evidence for an ancient duplication of the entire yeast genome. Nature 387:708-713.
-
(1997)
Nature
, vol.387
, pp. 708-713
-
-
Wolfe, K.H.1
Shields, D.C.2
-
83
-
-
84870712349
-
Trade-off between selection for dosage compensation and masculinization on the avian Z chromosome
-
Wright AE, Moghadam HK, Mank JE. 2012. Trade-off between selection for dosage compensation and masculinization on the avian Z chromosome. Genetics 192:1433-1445.
-
(2012)
Genetics
, vol.192
, pp. 1433-1445
-
-
Wright, A.E.1
Moghadam, H.K.2
Mank, J.E.3
-
84
-
-
84943650369
-
Conservation of regional variation in sex-specific sex chromosome regulation
-
Wright AE, Zimmer F, Harrison PW, Mank JE. 2015. Conservation of regional variation in sex-specific sex chromosome regulation. Genetics 201:587-598.
-
(2015)
Genetics
, vol.201
, pp. 587-598
-
-
Wright, A.E.1
Zimmer, F.2
Harrison, P.W.3
Mank, J.E.4
-
85
-
-
78649458548
-
RNA sequencing shows no dosage compensation of the active X-chromosome
-
Xiong Y, et al. 2010. RNA sequencing shows no dosage compensation of the active X-chromosome. Nat Genet. 42:1043-1047.
-
(2010)
Nat Genet
, vol.42
, pp. 1043-1047
-
-
Xiong, Y.1
-
86
-
-
84922371409
-
The ensembl REST API: Ensembl data for any language
-
Yates A, et al. 2015. The ensembl REST API: ensembl data for any language. Bioinformatics 31:143-145.
-
(2015)
Bioinformatics
, vol.31
, pp. 143-145
-
-
Yates, A.1
|