The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome

PLoS Biology

Volumn 13, Issue 12, 2015, Pages

  Hurst, Laurence D ^a   Ghanbarian, Avazeh T ^a   Forrest, Alistair R R ^b   Huminiecki, Lukasz ^c,d,e,f   Rehli, Michael ^g,cd   Kenneth Baillie, J ^h   de Hoon, Michiel J L ^b   Haberle, Vanja ^i,j   Lassmann, Timo ^b   Kulakovskiy, Ivan V ^k,l   Lizio, Marina ^b   Itoh, Masayoshi ^b   Andersson, Robin ^m   Mungall, Christopher J ⁿ   Meehan, Terrence F ^o   Schmeier, Sebastian ^p,cc   Bertin, Nicolas ^b   Jørgensen, Mette ^m   Dimont, Emmanuel ^q   Arner, Erik ^b   Schmidl, Christian ^g   Schaefer, Ulf ^p   Medvedeva, Yulia A ^p   Plessy, Charles ^b   Vitezic, Morana ^b,e   Severin, Jessica ^b   Semple, Colin A ^r   Ishizu, Yuri ^b   Young, Robert S ^r   Francescatto, Margherita ^s,t   Alam, Intikhab ^p   Albanese, Davide ^u   Altschuler, Gabriel M ^q   Arakawa, Takahiro ^b   Archer, John A C ^p   Arner, Peter ^v   Babina, Magda ^w   Baker, Sarah ^r   Balwierz, Piotr J ^x   Beckhouse, Anthony G ^y   Pradhan, Swati Bhatt ^z   Blake, Judith A ^aa   Blumenthal, Antje ^y   Bodega, Beatrice ^ab   Bonetti, Alessandro ^b   Briggs, James ^y   Brombacher, Frank ^ac,ad   Maxwell Burroughs, A ^b   Califano, Andrea ^ae   Cannistraci, Carlo V ^p,ce   Carbajo, Daniel ^bo   Chen, Yun ^m   Chierici, Marco ^u   Ciani, Yari ^af   Clevers, Hans C ^ag,ah,ai   Dalla, Emiliano ^af   Davis, Carrie A ^aj   Detmar, Michael ^ak   Diehl, Alexander D ^al   Dohi, Taeko ^am   Drabløs, Finn ^an   Edge, Albert S B ^ao   Edinger, Matthias ^g,cd   Ekwall, Karl ^e   Endoh, Mitsuhiro ^ap   Enomoto, Hideki ^aq   Fagiolini, Michela ^ar   Fairbairn, Lynsey ^h   Fang, Hai ^as   Farach Carson, Mary C ^at   Faulkner, Geoffrey J ^au   Favorov, Alexander V ^l,av,aw   Fisher, Malcolm E ^h   Frith, Martin C ^ax   Fujita, Rie ^ay   Fukuda, Shiro ^b   Furlanello, Cesare ^u   Furuno, Masaaki ^b   Furusawa, Jun ichi ^ap,az   Geijtenbeek, Teunis B ^ba   Gibson, Andrew ^bb   Gingeras, Thomas ^aj   Goldowitz, Daniel ^bc   Gough, Julian ^as   Guhl, Sven ^w   Guler, Reto ^ac,ad   Gustincich, Stefano ^bd   Ha, Thomas J ^bc   Hamaguchi, Masahide ^be   Hara, Mitsuko ^b   Harbers, Matthias ^b   Harshbarger, Jayson ^b   Hasegawa, Akira ^b   Hasegawa, Yuki ^b   Hashimoto, Takehiro ^b   Herlyn, Meenhard ^bf   Hitchens, Kelly J ^y   Ho Sui, Shannan J ^q   Hofmann, Oliver M ^q   Hoof, Ilka ^m   Hori, Fumi ^b   Iida, Kei ^b   Ikawa, Tomokatsu ^ap   Jankovic, Boris R ^p   Jia, Hui ^bg   Joshi, Anagha ^h   Jurman, Giuseppe ^u   Kaczkowski, Bogumil ^b   Kai, Chieko ^bh   Kaida, Kaoru ^b   Kaiho, Ai ^b   Kajiyama, Kazuhiro ^b   Kanamori, Mutsumi Katayama ^b   Kasianov, Artem S ^l   Kasukawa, Takeya ^b   Katayama, Shintaro ^b   Kato, Sachi ^b   Kawaguchi, Shuji ^b   Kawamoto, Hiroshi ^ap   Kawamura, Yuki I ^am   Kawashima, Tsugumi ^b   Kempfle, Judith S ^ao   Kenna, Tony J ^y   Kere, Juha ^d,e   Khachigian, Levon M ^bi   Kitamura, Toshio ^bj   Peter Klinken, S ^bk   Knox, Alan J ^bl   Kojima, Miki ^b   Kojima, Soichi ^b   Kondo, Naoto ^b   Koseki, Haruhiko ^ap   Koyasu, Shigeo ^ap,az   Krampitz, Sarah ^ak   Kubosaki, Atsutaka ^b   Kwon, Andrew T ^b   Laros, Jeroen F J ^bb   Lee, Weonju ^bm   Lennartsson, Andreas ^e   Li, Kang ^m   Lilje, Berit ^m   Lipovich, Leonard ^bg   Mackay, Alan sim ^bn   Manabe, Riichiroh ^b   Mar, Jessica C ^bo   Marchand, Benoit ^p   Mathelier, Anthony ^bc   Mejhert, Niklas ^v   Meynert, Alison ^r   Mizuno, Yosuke ^bp   de Lima Morais, David A ^as   Morikawa, Hiromasa ^be   Morimoto, Mitsuru ^aq   Moro, Kazuyo ^ap,az,bq   Motakis, Efthymios ^b   Motohashi, Hozumi ^ay   Mummery, Christine L ^bb   Murata, Mitsuyoshi ^b   Nagao, Sayaka Sato ^b   Nakachi, Yutaka ^bp   Nakahara, Fumio ^bj   Nakamura, Toshiyuki ^bh   Nakamura, Yukio ^br   Nakazato, Kenichi ^b   van Nimwegen, Erik ^x   Ninomiya, Noriko ^b   Nishiyori, Hiromi ^b   Noma, Shohei ^b   Nozaki, Tadasuke ^bs   Ogishima, Soichi ^bt   Ohkura, Naganari ^be   Ohmiya, Hiroko ^b   Ohno, Hiroshi ^ap   Ohshima, Mitsuhiro ^bu   Okada, Mariko Hatakeyama ^ap   Okazaki, Yasushi ^bp   Orlando, Valerio ^ab   Ovchinnikov, Dmitry A ^y   Pain, Arnab ^p   Passier, Robert ^bb   Patrikakis, Margaret ^bi   Persson, Helena ^e   Piazza, Silvano ^af   Prendergast, James G D ^r   Rackham, Owen J L ^as   Ramilowski, Jordan A ^b   Rashid, Mamoon ^p   Ravasi, Timothy ^p   Rizzu, Patrizia ^s   Roncador, Marco ^u   Roy, Sugata ^b   Rye, Morten B ^an   Saijyo, Eri ^b   Sajantila, Antti ^bv   Saka, Akiko ^b   Sakaguchi, Shimon ^be   Sakai, Mizuho ^b   Sato, Hiroki ^bh   Satoh, Hironori ^ay   Savvi, Suzana ^ac,ad   Saxena, Alka ^b,cf   Schneider, Claudio ^af   Schultes, Erik A ^bb   Schulze Tanzil, Gundula G ^w   Schwegmann, Anita ^ac,ad   Sengstag, Thierry ^b   Sheng, Guojun ^aq   Shimoji, Hisashi ^b   Shimoni, Yishai ^ae   Shin, Jay W ^b   Simon, Christophe ^b   Sugiyama, Daisuke ^bw   Sugiyama, Takaaki ^bh   Suzuki, Masanori ^b   Suzuki, Naoko ^b   Swoboda, Rolf K ^bf   't Hoen, Peter A C ^bb,bx   Tagami, Michihira ^b   Takahashi, Naoko ^b   Takai, Jun ^ay   Tanaka, Hiroshi ^bt   Tatsukawa, Hideki ^by   Tatum, Zuotian ^bb   Thompson, Mark ^bb   Toyoda, Hiroo ^bs   Toyoda, Tetsuro ^b   Valen, Eivind ^bz   van de Wetering, Marc ^ag   van den Berg, Linda M ^ba   Verardo, Roberto ^af   Vijayan, Dipti ^y   Vorontsov, Ilya E ^l   Wasserman, Wyeth W ^bc   Watanabe, Shoko ^b   Wells, Christine A ^y   Winteringham, Louise N ^bk   Wolvetang, Ernst ^y   Wood, Emily J ^bg   Yamaguchi, Yoko ^ca   Yamamoto, Masayuki ^ay   Yoneda, Misako ^bh   Yonekura, Yohei ^aq   Yoshida, Shigehiro ^b   Zabierowski, Suzan E ^bf   Zhang, Peter G ^bc   Zhao, Xiaobei ^m   Zucchelli, Silvia ^bd   Summers, Kim M ^h   Suzuki, Harukazu ^b   Daub, Carsten O ^b   Kawai, Jun ^b   Heutink, Peter ^s   Hide, Winston ^q   Freeman, Tom C ^h   Lenhard, Boris ^i,j   Bajic, Vladimir B ^p   Taylor, Martin S ^r   Makeev, Vsevolod J ^k,l,cb   Sandelin, Albin ^m   Hume, David A ^h   Carninci, Piero ^b   Hayashizaki, Yoshihide ^b   more..

^a Claverton Down   (United Kingdom)

^b RIKEN   (Japan)

^c STOCKHOLM UNIVERSITY   (Sweden)

^d SCIENCE FOR LIFE LABORATORY   (Sweden)

^e KAROLINSKA INSTITUTE   (Sweden)

^f Bioinformatics Infrastructure for Life Sciences (BILS)   (Sweden)

^g UNIVERSITY HOSPITAL REGENSBURG   (Germany)

^h UNIVERSITY OF EDINBURGH   (United Kingdom)

ⁱ UNIVERSITY OF BERGEN   (Norway)

^j IMPERIAL COLLEGE LONDON   (United Kingdom)

^k ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

^l VAVILOV INSTITUTE OF GENERAL GENETICS   (Russian Federation)

^m UNIVERSITY OF COPENHAGEN   (Denmark)

ⁿ LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^o WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

^p KING ABDULLAH UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Saudi Arabia)

^q HARVARD SCHOOL OF PUBLIC HEALTH   (United States)

^r UNIVERSITY OF EDINBURGH   (United Kingdom)

^s VU UNIVERSITY MEDICAL CENTER   (Netherlands)

^t UNIVERSITY OF PORTO   (Portugal)

^u FONDAZIONE BRUNO KESSLER   (Italy)

^v KAROLINSKA UNIVERSITY HOSPITAL   (Sweden)

^w CHARITÉ UNIVERSITÄTSMEDIZIN BERLIN   (Germany)

^x UNIVERSITY OF BASEL   (Switzerland)

^y UNIVERSITY OF QUEENSLAND   (Australia)

^z UNIVERSITY OF DELAWARE   (United States)

^aa JACKSON LABORATORY   (United States)

^ab DULBECCO TELETHON INSTITUTE   (Italy)

^ac INTERNATIONAL CENTRE FOR GENETIC ENGINEERING AND BIOTECHNOLOGY   (Italy)

^ad UNIVERSITY OF CAPE TOWN   (South Africa)

^ae NewYork Presbyterian Hospital   (United States)

^af Laboratorio Nazionale del Consorzio Interuniversitario per le Biotecnologie   (Italy)

^ag HUBRECHT INSTITUTE   (Netherlands)

^ah ROYAL NETHERLANDS ACADEMY OF ARTS AND SCIENCES   (Netherlands)

^ai UNIVERSITY MEDICAL CENTER UTRECHT   (Netherlands)

^aj Howard Hughes Medical Institute Cold Spring Harbor Laboratory Cold Spring Harbor   (United States)

^ak ETH ZURICH   (Switzerland)

^al UNIVERSITY AT BUFFALO   (United States)

^am National Center for Global Health and Medicine   (Japan)

^an NORWEGIAN UNIVERSITY OF SCIENCE AND TECHNOLOGY   (Norway)

^ao MASSACHUSETTS EYE AND EAR INFIRMARY   (United States)

^ap Institute of Physical and Chemical Research   (Japan)

^aq RIKEN Center for Biosystems Dynamics Research   (Japan)

^ar BOSTON CHILDREN S HOSPITAL   (United States)

^as UNIVERSITY OF BRISTOL   (United Kingdom)

^at RICE UNIVERSITY   (United States)

^au MATER MEDICAL RESEARCH INSTITUTE   (Australia)

^av JOHNS HOPKINS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^aw STATE RESEARCH INSTITUTE OF GENETICS AND SELECTION OF INDUSTRIAL MICROORGANISMS   (Russian Federation)

^ax NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^ay TOHOKU UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

^az KEIO UNIVERSITY SCHOOL OF MEDICINE   (Japan)

^ba UNIVERSITY OF AMSTERDAM   (Netherlands)

^bb LEIDEN UNIVERSITY MEDICAL CENTER   (Netherlands)

^bc UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^bd SISSA   (Italy)

^be OSAKA UNIVERSITY   (Japan)

^bf WISTAR INSTITUTE   (United States)

^bg WAYNE STATE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^bh UNIVERSITY OF TOKYO   (Japan)

^bi UNIVERSITY OF NEW SOUTH WALES   (Australia)

^bj UNIVERSITY OF TOKYO   (Japan)

^bk UNIVERSITY OF WESTERN AUSTRALIA   (Australia)

^bl UNIVERSITY OF NOTTINGHAM   (United Kingdom)

^bm Kyungpook National University School of Medicine   (South Korea)

^bn GRIFFITH UNIVERSITY   (Australia)

^bo ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

^bp SAITAMA MEDICAL UNIVERSITY   (Japan)

^bq JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^br RIKEN BIORESOURCE CENTER   (Japan)

^bs TOKYO UNIVERSITY OF PHARMACY AND LIFE SCIENCES   (Japan)

^bt TOKYO MEDICAL AND DENTAL UNIVERSITY   (Japan)

^bu OHU UNIVERSITY   (Japan)

^bv UNIVERSITY OF HELSINKI   (Finland)

^bw KYUSHU UNIVERSITY HOSPITAL   (Japan)

^bx NETHERLANDS BIOINFORMATICS CENTRE   (Netherlands)

^by NAGOYA UNIVERSITY   (Japan)

^bz HARVARD UNIVERSITY   (United States)

^ca NIHON UNIVERSITY   (Japan)

^cb MOSCOW INSTITUTE OF PHYSICS AND TECHNOLOGY   (Russian Federation)

^cc MASSEY UNIVERSITY   (New Zealand)

^cd Regensburg Centre for Interventional Immunology (RCI)   (Germany)

^ce DRESDEN UNIVERSITY OF TECHNOLOGY   (Germany)

^cf GUY S HOSPITAL   (United Kingdom)

more..

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; AUTOSOME; CONTROLLED STUDY; FEMALE; GENE EXPRESSION PROFILING; GENETIC ANALYSIS; HAPLOIDY; HOUSEKEEPING GENE; HUMAN; HUMAN CELL; HUMAN TISSUE; MALE; MOUSE; NONHUMAN; RETROPOSITION; RETROPOSON; TISSUE SPECIFICITY; TREND STUDY; X CHROMOSOME; ANIMAL; ANTIBODY SPECIFICITY; BIOLOGICAL MODEL; CELL CULTURE; CHROMOSOME; COMPARATIVE STUDY; DOWN REGULATION; ESSENTIAL GENE; GENE EXPRESSION REGULATION; GENETIC DATABASE; GENOME; HUMAN GENOME; SEXUAL DEVELOPMENT; SPECIES DIFFERENCE; TUMOR CELL LINE;

RETROPOSON;

ANIMALS; CELL LINE, TUMOR; CELLS, CULTURED; CHROMOSOMES, HUMAN, X; CHROMOSOMES, MAMMALIAN; DATABASES, GENETIC; DOWN-REGULATION; FEMALE; GENE EXPRESSION REGULATION; GENES, ESSENTIAL; GENOME; GENOME, HUMAN; HUMANS; MALE; MODELS, GENETIC; ORGAN SPECIFICITY; RETROELEMENTS; SEX CHARACTERISTICS; SPECIES SPECIFICITY; X CHROMOSOME;

EID: 84969295765     PISSN: 15449173     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.1002315     Document Type: Article

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