DNA-surfactant systems: Particles, gels, and nanostructures

Nanoscience: Colloidal and Interfacial Aspects

Volumn , Issue , 2010, Pages 379-394

  Dias, Rita ^a   Morán, Carmen ^b   Costa, Diana ^b   Miguel, Maria ^b   Lindman, Björn ^a,b  

^a LUND UNIVERSITY   (Sweden)

^b UNIVERSITY OF COIMBRA   (Portugal)

Author keywords

[No Author keywords available]

Indexed keywords

CATIONIC SURFACTANTS; CONDENSATION; DYES; POLYMERS;

DNA CONDENSATION; LOW DIELECTRIC CONSTANTS; MULTIVALENT IONS; NEUTRAL POLYMERS; SURFACTANT SYSTEM;

DNA;

EID: 85015232484     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1201/EBK1420065008     Document Type: Chapter

References (100)

1. Akinchina, A. and Linse, P. 2002. “Monte Carlo simulations of polyion-macroion complexes. 1. Equal absolute polyion and macroion charges,” Macromolecules, 35: 5183-93.
2. Babak, V.G., Merkovich, E.A., Galbraikh, L.S., Shtykova, E.V., and Rinaudo, M. 2000. “Kinetics of diffusionally induced gelation and ordered nanostructure formation in surfactant-polyelectrolyte complexes formed at water/water emulsion type interfaces,” Mendeleev Communications, 10: 94-5.
3. Bae, Y.H., Okano, T., and Kim, S.W. 1991. “On off thermocontrol of solute transport. 1. Temperaturedependence of swelling of N-isopropylacrylamide networks modified with hydrophobic components in water,” Pharmaceutical Research, 8: 531-7.
4. Bertin, A., Leforestier, A., Durand, D., and Livolant, F. 2004. “Role of histone tails in the conformation and interactions of nucleosome core particles,” Biochemistry, 43: 4773-80.
5. Bhattacharya, S. and Mandal, S.S. 1997. “Interaction of surfactants with DNA. Role of hydrophobicity and surface charge on intercalation and DNA melting,” Biochimica et Biophysica Acta-Biomembranes, 1323: 29-44.
6. Bilalov, A., Leal, C., and Lindman, B. 2004. “Mixing oil and water by a DNA-based surfactant,” Journal of Physical Chemistry B, 108: 15408-14.
7. Bitton, R., Schmidt, J., Biesalski, M., Tu, R., Tirrell, M., and Bianco-Peled, H. 2005. “Self-assembly of model DNA-binding peptide amphiphiles,” Langmuir, 21: 11888-95.
8. Blagbrough, I.S., Geall, A.J., and Neal, A.P. 2003. “Polyamines and novel polyamine conjugates interact with DNA in ways that can be exploited in non-viral gene therapy,” Biochemical Society Transactions, 31: 397-406.
9. Bombelli, C., Borocci, S., Diociaiuti, M., Faggioli, F., Galantini, L., Luciani, P., Mancini, G., and Sacco, M.G. 2005a. “Role of the spacer of cationic gemini amphiphiles in the condensation of DNA,” Langmuir, 21: 10271-4.
10. Bombelli, C., Faggioli, F., Luciani, P., Mancini, G., and Sacco, M.G. 2005b. “Efficient transfection of DNA by liposomes formulated with cationic gemini amphiphiles,” Journal of Medicinal Chemistry, 48: 5378-82.
11. Cárdenas, M., Braem, A., Nylander, T. and Lindman, B. 2003. “DNA compaction at hydrophobic surfaces induced by a cationic amphiphile,” Langmuir, 19: 7712-18.
12. Carnali, J.O. 1993. "(Polymer Polymer)-like phase-behavior in the system tetradecyltrimethylammonium bromide sodium polyacrylate water,” Langmuir, 9: 2933-41.
13. Ceccarelli, D.F.J. and Frappier, L. 2000. “Functional analyses of the EBNAl origin DNA binding protein of Epstein-Barr virus,” Journal of Virology, 74: 4939-48.
14. Cheetham, G.M.T., Jeruzalmi, D., and Steitz, T.A. 1999. “Structural basis for initiation of transcription from an RNA polymerase-promoter complex”, Nature, 399: 80-3.
15. Chen, L., Yu, S.Y., Kagami, Y., Gong, J.P., and Osada, Y. 1998. “Surfactant binding of polycations carrying charges on the chain backbone: Cooperativity, stoichiometry and crystallinity,” Macromolecules, 31: 787-94.
16. Cooper, C.L., Goulding, A., Kayitmazer, A.B., Ulrich, S., Stoll, S., Turksen, S., Yusa, S., Kumar, A., and Dubin, P.L. 2006. “Effects of polyelectrolyte chain stiffness, charge mobility, and charge sequences on binding to proteins and micelles,” Biomacromolecules, 7: 1025-35.
17. Costa, D., Burrows, H.D., and Miguel, M.D. 2005. “Changes in hydration of lanthanide ions on binding to DNA in aqueous solution,” Langmuir, 21: 10492-6.
18. Costa, D., dos Santos, S., Antunes, F.E., Miguel, M.G., and Lindman, B. 2006a. “Some novel aspects of DNA physical and chemical gels,” Arkivoc, 2006: 161-72.
19. Costa, D., Hansson, P., Schneider, S., Miguel, M.G., and Lindman, B. 2006b. “Interaction between covalent DNA gels and a cationic surfactant,” Biomacromolecules, 7: 1090-5.
20. Costa, D., Miguel, M.G., and Lindman, B. 2007a. “Effect of additives on swelling of covalent DNA gels,” Journal of Physical Chemistry B, 111: 8444-52.
21. Costa, D., Miguel, M.G., and Lindman, B. 2007b. “Responsive polymer gels: Double-stranded versus singlestranded DNA,” Journal of Physical Chemistry B, 111: 10886-96.
22. Costa, D., Pais, A.A.C.C., Miguel, M., and Lindman, B. “Cross-linked DNA gels as carriers to controlled release of proteins,” Colloids and Surfaces A.
23. Dasgupta, A., Das, P.K., Dias, R.S., Miguel, M.G., Lindman, B., Jadhav, V.M., Gnanamani, M., and Maiti, S. 2007. “Effect of headgroup on DNA-cationic surfactant interactions,” Journal of Physical Chemistry B, 111: 8502-8.
24. Dias, R.S. and Lindman, B. (Eds.) 2008. DNA Interactions with Polymers and Surfactants, Wiley, Hoboken, NJ.
25. Dias, R., Melʼnikov, S., Lindman, B., and Miguel, M.G. 2000. “DNAphase behavior in the presence of oppositely charged surfactants,” Langmuir, 16: 9577-83.
26. Dias, R.S., Lindman, B., and Miguel, M.G. 2001. “Interactions between DNA and surfactants,” Progress in Colloid and Polymer Science, 118: 163-7.
27. Dias, R.S., Lindman, B., and Miguel, M.G. 2002a. “Compaction and decompaction of DNA in the presence of catanionic amphiphile mixtures,” Journal of Physical Chemistry B, 106: 12608-12.
28. Dias, R.S., Lindman, B., and Miguel, M.G. 2002b. “DNA interaction with catanionic vesicles,” Journal of Physical Chemistry B, 106: 12600-7.
29. Dias, R.S., Magno, L.M., Valente, A.J.M., Das, D., Das, P.K., Maiti, S., Miguel, M.G., and Lindman, B. 2008. “Interaction between DNA and cationic surfactants: Effect of DNA conformation and surfactant headgroup,” Journal of Physical Chemistry B, 112: 14446-52.
30. Eskilsson, K., Leal, C., Lindman, B., Miguel, M., and Nylander, T. 2001. “DNA-surfactant complexes at solid surfaces,” Langmuir, 17: 1666-9.
31. Evans, D.F. and Wennerström, H. 1999. The Colloidal Domain. Where Physics, Chemistry and Biology, and Technology Meet, NewYork: Wiley-VCH.
32. Ewert, K.K., Evans, H.M., Zidovska, A., Bouxsein, N.F., Ahmad, A., and Safinya, C.R. 2006. “A columnar phase of dendritic lipid-based cationic liposome-DNA complexes for gene delivery: Hexagonally ordered cylindrical micelles embedded in a DNA honeycomb lattice,” Journal of the American Chemical Society, 128: 3998-4006.
33. Gaugain, B., Barbet, J., Capelle, N., Roques, B.P., Lepecq, J.B., and Lebret, M. 1978. “DNA bifunctional intercalators. 2. Fluorescence properties and DNA binding interaction of an ethidium homodimer and an acridine ethidium heterodimer,” Biochemistry, 17: 5078-88.
34. Geiduschek, E.P. and Herskovits, T.T. 1961. “Nonaqueous solutions of DNA. Reversible and irreversible denaturation in methanol,” Archives of Biochemistry and Biophysics, 95: 114-29.
35. Ghirlando, R., Wachtel, E.J., Arad, T., and Minsky, A. 1992. “DNA packaging induced by micellar aggregates - a novel in vitro DNA condensation system,” Biochemistry, 31: 7110-19.
36. Goddard, E. and Ananthapadmanabhan, K. 1993. Interactions of Surfactants with Polymers and Proteins, Boca Raton, FL: CRC Press.
37. Goddard, E.D. and Hannan, R.B. 1977. “Polymer-surfactant interactions,” Journal of the American Oil Chemists Society, 54: 561-6.
38. Goracci, L., Germani, R., Savelli, G., and Bassani, D.M. 2005. “Hoechst 33258 as a pH-sensitive probe to study the interaction of amine oxide surfactants with DNA,” Chembiochem, 6: 197-203.
39. Hayakawa, K., Santerre, J.P., and Kwak, J.C.T. 1983. “The binding of cationic surfactants by DNA,” Biophysical Chemistry, 17: 175-81.
40. Holmberg, K., Jönsson, B., Kronberg, B., and Lindman, B. 2003. Surfactants and Polymers in Aqueous Solution, West Sussex: JohnWiley & Sons, Ltd.
41. Hsu, W.L., Chen, H.L., Liou, W., Lin, H.K., and Liu, W.L. 2005. “Mesomorphic complexes of DNA with the mixtures of a cationic surfactant and a neutral lipid,” Langmuir, 21: 9426-31.
42. Jadhav, V., Maiti, S., Dasgupta, A., Das, P.K., Dias, R.S., Miguel, M.G., and Lindman, B. 2008. “Effect of the head-group geometry of amino-acid based cationic surfactants on interaction with plasmid DNA,” Biomacromolecules, 9: 1852-9.
43. Jennings, K.H., Marshall, I.C.B., Wilkinson, M.J., Kremer, A., Kirby, A.J., and Camilleri, P. 2002. “Aggregation properties of a novel class of cationic gemini surfactants correlate with their efficiency as gene transfection agents,” Langmuir, 18: 2426-9.
44. Julia Ferres, M.R., Erra Serrabasa, P., Munoz Liron, I., and Ayats Llorens, A. 1998. A procedure for preparing capsules and for encapsulation of substances. Spanish Patent, ES2112150.
45. Karlsson, L., van Eijk, M.C.P., and Soderman, O. 2002. “Compaction of DNA by gemini surfactants: Effects of surfactant architecture,” Journal of Colloid and Interface Science, 252: 290-6.
46. Kayitmazer, A.B., Seyrek, E., Dubin, P.L., and Staggemeier, B.A. 2003. “Influence of chain stiffness on the interaction of polyelectrolytes with oppositely charged micelles and proteins,” Journal of Physical Chemistry B, 107: 8158-65.
47. Kim, B.S., Ishizawa, M., Gong, J.P., and Osada, Y. 1999. “Molecular and supramolecular structures of complexes formed by polyelectrolyte-surfactant interactions: Effects of charge density and compositions,” Journal of Polymer Science Part A-Polymer Chemistry, 37: 635-44.
48. Koltover, I., Salditt, T., Rädler, J.O., and Safinya, C.R. 1998. “An inverted hexagonal phase of cationic liposome-DNA complexes related to DNA release and delivery,” Science, 281: 78-81.
49. Krishnaswamy, R., Raghunathan, V.A., and Sood, A.K. 2004. “Reentrant phase transitions of DNA-surfactant complexes,” Physical Review E, 69: 031905.
50. Kwak, J.C.T. (Ed.) 1998. Polymer-Surfactant Systems, NewYork, Marcel Dekker.
51. Lapitsky, Y. and Kaler, E.W. 2004. “Formation of surfactant and polyelectrolyte gel particles in aqueous solutions,” Colloids and Surfaces A-Physicochemical and Engineering Aspects, 250: 179-87.
52. Lapitsky, Y. and Kaler, E.W. 2006. “Formation and structural control of surfactant and polyelectrolyte gels,” Colloids and Surfaces A-Physicochemical and Engineering Aspects, 282: 118-28.
53. Lapitsky, Y., Eskuchen, W.J., and Kaler, E.W. 2006. “Surfactant and polyelectrolyte gel particles that swell reversibly,” Langmuir, 22: 6375-9.
54. Leal, C., Topgaard, D., Martin, R.W., and Wennerström, H. 2004a. “NMR studies of molecular mobility in a DNA-amphiphile complex,” Journal of Physical Chemistry B, 108: 15392-7.
55. Leal, C., Wadsö, L., Olofsson, G., Miguel, M., andWennerström, H. 2004b. “The hydration of aDNA-amphiphile complex,” Journal of Physical Chemistry B, 108: 3044-50.
56. Levine, L., Jencks, W.P., and Gordon, J.A. 1963. “The relationship of structure to effectiveness of denaturing agents for deoxyribonucleic acid,” Biochemistry, 2: 168-75.
57. Lundberg, D., Stjerndahl, M., and Holmberg, K. 2005. “Mixed micellar systems of cleavable surfactants,” Langmuir, 21: 8658-63.
58. Maheswari, P.U., Rajendiran, V., Palaniandavar, M., Thomas, R., and Kulkarni, G.U. 2006. “Mixed ligand ruthenium (II) complexes of 5,6-dimethyl-1,10-phenanthroline: The role of ligand hydrophobicity on DNA binding of the complexes,” Inorganica Chimica Acta, 359: 4601-12.
59. Matsubara, K., Sano, N., Umehara, T., and Horikoshi, M. 2007. “Global analysis of functional surfaces of core histones with comprehensive point mutants,” Genes to Cells, 12: 13-33.
60. McLoughlin, D., Imperor-Clerc, M., and Langevin, D. 2004. “A new cubic phase containing DNA and a surfactant,” Chemphyschem, 5: 1619-23.
61. Melnikova, Y.S. and Lindman, B. 2000. “pH-controlled DNA condensation in the presence of dodecyldimethylamine oxide,” Langmuir, 16: 5871-8.
62. Melnikov, S.M., Sergeyev, V.G., Yoshikawa, K., Takahashi, H., and Hatta, I. 1997. “Cooperativity or phase transition? Unfolding transition of DNA cationic surfactant complex,” Journal of Chemical Physics, 107: 6917-24.
63. Mills, J.B., Vacano, E., and Hagerman, P.J. 1999. “Flexibility of single-stranded DNA: Use of gapped duplex helices to determine the persistence lengths of poly(dT) and poly(dA),” Journal of Molecular Biology, 285: 245-57.
64. Morán, M.C., Miguel, M.G., and Lindman, B. 2007a. “DNA gel particles: Particle preparation and release characteristics,” Langmuir, 23: 6478-81.
65. Morán, M.C., Miguel, M.G., and Lindman, B. 2007b. DNA gel particles: Particle preparation and release characteristics. InValente, A. and Seixas de Melo, J. (Eds.) Colloid & Interfaces-Book of Proceedings-RICI2. Coimbra.
66. Morán, M.C., Miguel, M.G., and Lindman, B. 2007c. “Surfactant-DNA gel particles: Formation and release characteristics,” Biomacromolecules, 8: 3886-92.
67. Morán, M.C., Pons, R., Miguel, M.G., and Lindman, B. “Nanostructures in DNA gel particles,” manuscript in preparation.
68. Murphy, M.C., Rasnik, I., Cheng, W., Lohman, T.M., and Ha, T.J. 2004. “Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy,” Biophysical Journal, 86: 2530-7.
69. Norrman, J., Lynch, I., and Piculell, L. 2007. “Phase behavior of aqueous polyion-surfactant ion complex salts: Effects of polyion charge density,” Journal of Physical Chemistry B, 111: 8402-10.
70. Orosz, J.M. and Wetmur, J.G. 1977. “DNA melting temperatures and renaturation rates in concentrated alkylammonium salt-solutions,” Biopolymers, 16: 1183-99.
71. Panpacea, A., Valente, A.J.M., Patachia, S., Miguel, M.G., and Lindman, B. (2008) “PVA-DNA cryogel membranes: Characterization, swelling, and transport studies,” Langmuir, 24: 273-9.
72. Pfeiffer, I. and Höök, F. 2004. “Bivalent cholesterol-based coupling of oligonucleotide to lipid membrane assemblies,” Journal of American Chemical Society, 126: 10224-5.
73. Pfeiffer, I. and Höök, F. 2006. “Quantification of oligonucleotide modifications of small unilamellar lipid vesicles,” Analytical Chemistry, 78: 7493-8.
74. Piculell, L. and Lindman, B. 1992. “Association and segregation in aqueous polymer/polymer, polymer surfactant, and surfactant surfactant mixtures-similarities and differences,” Advances in Colloid and Interface Science, 41: 149-78.
75. Rädler, J.O., Koltover, I., Salditt, T., and Safinya, C.R. 1997. “Structure of DNA-cationic liposome complexes: DNA intercalation in multilamellar membranes in distinct interhelical packing regimes,” Science, 275: 810-14.
76. Ronsin, G., Perrin, C., Guedat, P., Kremer, A., Camilleri, P., and Kirby, A.J. 2001. “Novel spermine-based cationic gemini surfactants for gene delivery,” Chemical Communications, 2234-5.
77. Rosa, M., Dias, R., Miguel, M.D., and Lindman, B. 2005. “DNA-cationic surfactant interactions are different for double- and single-stranded DNA,” Biomacromolecules, 6: 2164-71.
78. Rosa, M., Moran, M.D., Miguel, M.G., and Lindman, B. 2007. “The association of DNA and stable catanionic amino acid-based vesicles,” Colloids and Surfaces A-Physicochemical and Engineering Aspects, 301: 361-75.
79. Rosa, M., Pereira, N.P., Simões, S., Lima, M.C.P., Lindman, B., and Miguel, M. 2008. “DNA pre-condensation with an amino acid-based cationic amphiphile. A viable approach for liposome-based gene delivery,” Molecular Membrane Biology, 25: 23-34.
80. Santoso, S.S., Vauthey, S., and Zhang, S.G. 2002. “Structures, function and applications of amphiphilic peptides,” Current Opinion in Colloid and Interface Science, 7: 262-6.
81. Satake, I., Takahashi, T., Hayakawa, K., Maeda, T., and Aoyagi, M. 1990. “Effect of charge-density on the cooperative binding isotherm of surfactant ion to polyelectrolyte,” Bulletin of the Chemical Society of Japan, 63: 926-8.
82. Scarzello, M., Smisterova, J., Wagenaar, A., Stuart, M.C.A., Hoekstra, D., Engberts, J., and Hulst, R. 2005. “Sunfish cationic amphiphiles: Toward an adaptative lipoplex morphology,” Journal of the American Chemical Society, 127: 10420-9.
83. Sen, J. and Chaudhuri, A. 2005. “Gene transfer efficacies of novel cationic amphiphiles with alanine, beta-alanine, and serine headgroups: A structure-activity investigation,” Bioconjugate Chemistry, 16: 903-12.
84. Shirahama, K., Takashima, K., and Takisawa, N. 1987. “Interaction between dodecyltrimethylammonium chloride and DNA,” Bulletin of the Chemical Society of Japan, 60: 43-7.
85. Smith, S.B., Cui, Y.J., and Bustamante, C. 1996. “Overstretching B-DNA: The elastic response of individual double-stranded and single-stranded DNA molecules,” Science, 271: 795-9.
86. Smith, P., Lynden-Bell, R.M., and Smith, W. 2000. “Surfactant structure around DNA in aqueous solution,” Physical Chemistry Chemical Physics, 2: 1305-10.
87. Stoll, S. and Chodanowski, P. 2002. “Polyelectrolyte adsorption on an oppositely charged spherical particle. Chain rigidity effects,” Macromolecules, 35: 9556-62.
88. Stoltenberg, R.M. and Woolley, A.T. 2004. “DNA-templated nanowire fabrication,” Biomedical Microdevices, 6: 105-11.
89. Thalberg, K. and Lindman, B. 1989. “Interaction between hyaluronan and cationic surfactants,” Journal of Physical Chemistry, 93: 1478-83.
90. Thalberg, K., Lindman, B., and Bergfeldt, K. 1991a. “Phase-behavior of systems of polyacrylate and cationic surfactants,” Langmuir, 7: 2893-8.
91. Thalberg, K., Lindman, B., and Karlstrom, G. 1991b. “Phase-behavior of systems of cationic surfactant and anionic polyelectrolyte - influence of surfactant chain-length and polyelectrolyte molecular-weight,” Journal of Physical Chemistry, 95: 3370-6.
92. Tinland, B., Pluen, A., Sturm, J., and Weill, G. 1997. “Persistence length of single-stranded DNA,” Macromolecules, 30: 5763-5.
93. Verma, I.M. and Somia, N. 1997. “Gene therapy - promises, problems and prospects,” Nature, 389: 239-42.
94. Wagner, G., Bancaud, A., Quivy, J.-P., Clapier, C., Almouzni, G., and Viovy, J.-L. 2005. “Compaction kinetics on single dnas: purified nucleosome reconstitution systems versus crude extract,” Biophysics Journal, 89: 3647-59.
95. Wallin, T. and Linse, P. 1996a. “Monte Carlo simulations of polyelectrolytes at charged micelles. 1. Effects of chain flexibility,” Langmuir, 12: 305-14.
96. Wallin, T. and Linse, P. 1996b. “Monte Carlo simulations of polyelectrolytes at charged micelles. 2. Effects of linear charge density,” Journal of Physical Chemistry, 100: 17873-80.
97. Wallin, T. and Linse, P. 1997. “Monte Carlo simulations of polyelectrolytes at charged micelles. 3. Effects of surfactant tail length,” Journal of Physical Chemistry B, 101: 5506-13.
98. Waterhouse, J.E., Harbottle, R.P., Keller, M., Kostarelos, K., Coutelle, C., Jorgensen, M.R., and Miller, A.D. 2005. “Synthesis and application of integrin targeting lipopeptides in targeted gene delivery,” Chembiochem, 6: 1212-23.
99. West, M. andWilson, V.G. 2002. “Hydrophobic residue contributions to sequence-specific DNA binding by the bovine papillomavirus helicase E1,” Virology, 296: 52-61.
100. Zhou, S.Q., Liang, D.H., Burger, C., Yeh, F.J., and Chu, B. 2004. “Nanostructures of complexes formed by calf thymus DNA interacting with cationic surfactants,” Biomacromolecules, 5: 1256-61.