Reservoirs of extraintestinal pathogenic Escherichia coli

Microbiology Spectrum

Volumn 3, Issue 5, 2015, Pages

  Manges, Amee R ^a   Johnson, James R ^b,c  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^b VETERANS AFFAIRS MEDICAL CENTER   (United States)

^c UNIVERSITY OF MINNESOTA MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; DISEASE CARRIER; ENVIRONMENTAL EXPOSURE; ESCHERICHIA COLI INFECTIONS; FOODBORNE DISEASES; HUMAN; MEAT; MICROBIOLOGY; PET ANIMAL; TRANSMISSION;

ANIMALS; DISEASE RESERVOIRS; ENVIRONMENTAL EXPOSURE; ESCHERICHIA COLI INFECTIONS; FOODBORNE DISEASES; HUMANS; MEAT PRODUCTS; PETS;

EID: 85001819546     PISSN: None     EISSN: 21650497     Source Type: Journal    
DOI: 10.1128/microbiolspec.UTI-0006-2012     Document Type: Article

References (137)

1. Bettelheim KA, Ismail N, Shinbaum R, Shooter RA, Moorhouse E, Farrell W. 1976. The distribution of serotypes of Escherichia coli in cowpats and other animal material compared with serotypes of E. coli isolated from human sources. J Hyg (Lond) 76:403-406.
2. Bettelheim KA. 1997. E. coli in the normal flora of humans and animals, p 85-109. Cambridge University Press, Cambridge.
3. Coque TM, Novais A, Carattoli A, Poirel L, Pitout JDD, Peixe L, Baquero F, Canton R, Nordmann P. 2008. Dissemination of clonally related Escherichia coli strains expressing extended-spectrum betalactamase CTX-M-15. Emerg Infect Dis 14:195-200.
4. Nicolas-Chanoine MH, Blanco J, Leflon-Guibout V, Demarty R, Alonso MP, Canica MM, Park YJ, Lavigne JP, Pitout J, Johnson JR. 2008. Intercontinental emergence of Escherichia coli clone O25:H4-ST131 producing CTX-M-15. J Antimicrob Chemother 61:273-281.
5. George DB, Manges AR. 2010. A systematic review of outbreak and non-outbreak studies of extraintestinal pathogenic Escherichia coli causing community-acquired infections. Epidemiol Infect 138:1679-1690.
6. Rogers Ba, Sidjabat HE, Paterson DL. 2011. Escherichia coli O25b-ST131: a pandemic, multiresistant, community-associated strain. J Antimicrob Chemother 66:1-14.
7. Manges AR, Johnson JR, Foxman B, O'Bryan TT, Fullerton KE, Riley LW. 2001. Widespread distribution of urinary tract infections caused by a multidrug-resistant Escherichia coli clonal group. N Engl J Med 345:1007-1013.
8. Johnson JR, Murray AC, Kuskowski MA, Schubert S, Prere M, Picard B, Colodner R, Raz R. 2005. Distribution and characteristics of Escherichia coli clonal group A. Emerg Infect Dis 11:141-145.
9. Blanco J, Mora A, Mamani R, López C, Blanco M, Dahbi G, Herrera A, Blanco JE, Alonso MP, García-Garrote F, Chaves F, Orellana MA, Martínez-Martínez L, Calvo J, Prats G, Larrosa MN, González-Lopez JJ, López-Cerero L, Rodríguez-Baño J, Pascual A. 2011. National survey of Escherichia coli causing extraintestinal infections reveals the spread of drug-resistant clonal groups O25b:H4-B2-ST131, O15:H1-D-ST393 and CGA-D-ST69 with high virulence gene content in Spain. J Antimicrob Chemother 66:2011-2021.
10. Johnson JR, Manges AR, O'Bryan TT, Riley LW. 2002. A disseminated multidrug-resistant clonal group of uropathogenic Escherichia coli in pyelonephritis. Lancet 359:2249-2251.
11. Manges AR, Perdreau-Remington F, Solberg O, Riley LW. 2006. Multidrug-resistant Escherichia coli clonal groups causing communityacquired bloodstream infections. J Infect 53:25-29.
12. Dias RCS, Marangoni DV, Smith SP, Alves EM, Pellegrino FLPC, Riley LW, Moreira BM. 2009. Clonal composition of Escherichia coli causing community-acquired urinary tract infections in the State of Rio de Janeiro, Brazil. Microbial Drug Resistance 15:303-308.
13. Johnson JR, Menard ME, Lauderdale TL, Kosmidis C, Gordon D, Collignon P, Maslow JN, Andrasevic AT, Kuskowski MA. 2011. Global distribution and epidemiologic associations of Escherichia coli clonal group A, 1998-2007. Emerg Infect Dis 17:2001-2009.
14. Phillips I, King A, Rowe B, Eykyn S, Gransden WR, Frost JA, Gross RJ. 1988. Epidemic multiresistant Escherichia coli infection in West Lambeth Health District. Lancet 8593:1038-1041.
15. Olesen B, Kolmos HJ, Orskov F, Orskov I. 1995. A comparative study of nosocomial and community-acquired strains of Escherichia coli causing bacteraemia in a Danish University Hospital. J Hospital Infect 31:295-304.
16. Prats G, Navarro F, Mirelis B, Dalmau D, Margall N, Coll P, Stell AL, Johnson JR. 2000. Escherichia coli serotype O15:K52:H1 as a uropathogenic clone. J Clin Microbiol 38:201-209.
17. Johnson JR, Stell AL, Bryan TTO, Kuskowski M, Nowicki B, Johnson C, Maslow JN, Kaul A, Kavle J, Prats G. 2002. Global molecular epidemiology of the O15:K52:H1 extraintestinal pathogenic Escherichia coli clonal group: evidence of distribution beyond Europe. J Clin Microbiol 40:1913-1923.
18. Neil PMO, Talboys CA, Roberts AP, Azadian BS. 1990. The rise and fall of Escherichia coli O15 in a London Teaching Hospital. J Med Microbiol 33:23-27.
19. Olesen B, Scheutz F, Menard M, Skov MN, Kolmos HJr, Kuskowski MA, Johnson JR. 2009. Three-decade epidemiological analysis of Escherichia coli O15:K52:H1. J Clin Microbiol 47:1857-1862.
20. Johnson JR, Owens KL, Clabots CR, Weissman SJ, Cannon SB. 2006. Phylogenetic relationships among clonal groups of extraintestinal pathogenic Escherichia coli as assessed by multi-locus sequence analysis. Microbes Infect 8:1702-1713.
21. Gibreel TM, Dodgson AR, Cheesbrough J, Fox AJ, Bolton FJ, Upton M. 2012. Population structure, virulence potential and antibiotic susceptibility of uropathogenic Escherichia coli from Northwest England. J Antimicrob Chemother 67:346-356.
22. Fam N, Leflon-Guibout V, Fouad S, Aboul-Fadl L, Marcon E, Desouky D, El-Defrawy I, Abou-Atta A, Klena J, Nicolas-Chanoine MH. 2011. CTX-M-15-producing Escherichia coli clinical isolates in Cairo (Egypt), including isolates of clonal complex ST10 and clones ST131, ST73, and ST405 in both community and hospital settings. Microb Drug Resist 17:67-73.
23. Suzuki S, Shibata N, Yamane K, Wachino Ji, Ito K, Arakawa Y. 2009. Change in the prevalence of extended-spectrum-β-lactamase-producing Escherichia coli in Japan by clonal spread. J Antimicrob Chemother 63:72-79.
24. Manges AR, Tabor H, Tellis P, Vincent C, Tellier PP. 2008. Endemic and epidemic lineages of Escherichia coli that cause urinary tract infections. Emerg Infect Dis 14:1575-1583.
25. Jones GL, Warren RE, Skidmore SJ, Davies VA, Gibreel T, Upton M. 2008. Prevalence and distribution of plasmid-mediated quinolone resistance genes in clinical isolates of Escherichia coli lacking extendedspectrum β-lactamases. J Antimicrob Chemother 62:1245-1251.
26. 2 O102-ST405 clone. J Antimicrob Chemother 65:1537-1539.
27. Smet A MA, Persoons D, Dewulf J, Heyndrickx M, Claeys G, Lontie M, Van Meensel B, Herman L, Haesebrouck F, Butaye P. 2010. Characterization of extended-spectrum beta-lactamases produced by Escherichia coli isolated from hospitalized and nonhospitalized patients: emergence of CTX-M-15-producing strains causing urinary tract infections. Microb Drug Resist 16:6.
28. Tian GB, Rivera JI, Park YS, Johnson LE, Hingwe A, Adams-Haduch JM, Doi Y. 2011. Sequence type ST405 Escherichia coli isolate producing QepA1, CTX-M-15, and RmtB from Detroit, Michigan. Antimicrob Agents Chemother 55:3966-3967.
29. Mushtaq S, Irfan S, Sarma JB, Doumith M, Pike R, Pitout J, Livermore DM, Woodford N. 2011. Phylogenetic diversity of Escherichia coli strains producing NDM-type carbapenemases. J Antimicrob Chemother 66:2002-2005.
30. Peirano G, Schreckenberger PC, Pitout JDD. 2011. Characteristics of NDM-1-producing Escherichia coli isolates that belong to the successful and virulent clone ST131. Antimicrob Agents Chemother 55: 2986-2988.
31. Antao EM, Ewers C, Gürlebeck D, Preisinger R, Homeier T, Li G, Wieler LH. 2009. Signature-tagged mutagenesis in a chicken infection model leads to the identification of a novel avian pathogenic Escherichia coli fimbrial adhesin. PloS One 4:e7796.
32. Mora A, Lopez C, Herrera A, Viso S, Mamani R, Dhabi G, Alonso MP, Blanco M, Blanco JE, Blanco J. 2011. Emerging avian pathogenic Escherichia coli strains belonging to clonal groups O111:H4-D-ST2085 and O111:H4-D-ST117 with high virulence-gene content and zoonotic potential. Vet Microbiol 156:347-352.
33. Vincent C, Boerlin P, Daignault D, Dozois CM, Dutil L, Galanakis C, Reid-Smith RJ, Tellier PP, Tellis Pa, Ziebell K, Manges AR. 2010. Food reservoir for Escherichia coli causing urinary tract infections. Emerg Infect Dis 16:88-95.
34. Platell JL, Trott DJ, Johnson JR, Heisig P, Heisig A, Clabots CR, Johnston B, Cobbold RN. 2012. Prominence of an O75 clonal group (clonal complex 14) among non-ST131 fluoroquinolone-resistant Escherichia coli causing extraintestinal infections in humans and dogs in Australia. Antimicrob Agents Chemother doi:10.1128/AAC.06120-11.
35. Zong Z, Yu R. 2010. Escherichia coli carrying the blaCTX-M-15 gene of ST648. J Med Microbiol 59:1536-1537.
36. van der Bij AK PG, Goessens WH, van der Vorm ER, van Westreenen M, Pitout JD. 2011. Clinical and molecular characteristics of extendedspectrum-beta-lactamase-producing Escherichia coli causing bacteremia in the Rotterdam Area, Netherlands. Antimicrob Agents Chemother 55:3.
37. HornseyMPL, Wareham DW. 2011. A novel variant, NDM-5, of the New Delhi metallo-β-Lactamase in a multidrug-resistant Escherichia coli ST648 isolate recovered from a patient in the United Kingdom. Antimicrob Agents Chemother 55:3.
38. Coelho A, Mora A, Mamani R, López C, González-López JJ, Larrosa MN, Quintero-Zarate JN, Dahbi G, Herrera A, Blanco JE, Blanco M, Alonso MP, Prats G, Blanco J. 2011. Spread of Escherichia coli O25b:H4-B2-ST131 producing CTX-M-15 and SHV-12 with high virulence gene content in Barcelona (Spain). J Antimicrob Chemother 66:517-526.
39. Kim J, Bae IK, Jeong SH, Chang CL, Lee CH, Lee K. 2011. Characterization of IncF plasmids carrying the blaCTX-M-14 gene in clinical isolates of Escherichia coli from Korea. J Antimicrob Chemother 66: 1263-1268.
40. Mshana SE, Imirzalioglu C, Hain T, Domann E, Lyamuya EF, Chakraborty T. 2011. Multiple ST clonal complexes, with a predominance of ST131, of Escherichia coli harbouring blaCTX-M-15 in a tertiary hospital in Tanzania. Clin Microbiol Infect 17:1279-1282.
41. Oteo J, Diestra K, Juan C, Bautista V, Novais A, Pérez-Vázquez M, Moyá B, Miró E, Coque TM, Oliver A, Cantón R, Navarro F, Campos J. 2009. Extended-spectrum β-lactamase-producing Escherichia coli in Spain belong to a large variety of multilocus sequence typing types, including ST10 complex/A, ST23 complex/A and ST131/B2. International J Antimicrob Agents 34:173-176.
42. Caugant DA, Levin BR, Lidin-Janson G, Whittam TS, Svanborg Eden C, Selander RK. 1983. Genetic diversity and relationships among strains of Escherichia coli in the intestine and those causing urinary tract infections. Prog Allergy 33:203-227.
43. Obata-Yasuoka M, Ba-Thein W, Tsukamoto T, Yoshikawa H, Hayashi H. 2002. Vaginal Escherichia coli share common virulence factor profiles, serotypes and phylogeny with other extraintestinal E. coli. Microbiology 148:2745-2752.
44. Yamamoto S, Tsukamoto T, Terai a, Kurazono H, Takeda Y, Yoshida O. 1997. Genetic evidence supporting the fecal-perineal-urethral hypothesis in cystitis caused by Escherichia coli. J Urol 157:1127-1129.
45. MacFie J, O'Boyle C, Mitchell CJ, Buckley PM, Johnstone D, Sudworth P. 1999. Gut origin of sepsis: a prospective study investigating associations between bacterial translocation, gastric microflora, and septic morbidity. Gut 45:223-228.
46. Bailey JK, Pinyon JL, Anantham S, Hall RM. 2010. Commensal Escherichia coli of healthy humans: a reservoir for antibiotic-resistance determinants. J Med Microbiol 59:1331-1339.
47. Balis E, Vatopoulos AC, Kanelopoulou M, Mainas E, Kontogianni V, Balis E, Vatopoulos AC, Kanelopoulou M, Mainas E, Hatzoudis G, Kontogianni V. 1996. Indications of in vivo transfer of an epidemic R plasmid from Salmonella enteritidis to Escherichia coli of the normal human gut flora. Microbiology:4-7.
48. Raum E, Lietzau S, von Baum H, Marre R, Brenner H. 2008. Changes in Escherichia coli resistance patterns during and after antibiotic therapy: a longitudinal study among outpatients in Germany. Clin Microbiol Infect 14:41-48.
49. Foxman B, Zhang L, Tallman P, Andree BC, Geiger AM, Koopman JS, Gillespie BW, Palin KA, Sobel JD, Rode CK, Bloch CA, Marrs CF. 1997. Transmission of uropathogens between sex partners. J Infect Dis 175:989-992.
50. Johnson JR, Brown JJ, Carlino UB, Russo TA. 1998. Colonization with and acquisition of uropathogenic Escherichia coli as revealed by polymerase chain reaction-based detection. J Infect Dis 177:1120-1124.
51. Johnson JR, Clabots C. 2006. Sharing of virulent Escherichia coli clones among household members of a woman with acute cystitis. Clin Infect Dis 43:101-108.
52. Johnson JR, Clabots C, Kuskowski MA. 2008. Multiple-host sharing, long-term persistence, and virulence of Escherichia coli clones from human and animal household members. J Clin Microbiol 46:4078-4082.
53. Manges AR, Johnson JR, Riley LW. 2004. Intestinal population dynamics of UTI-causing Escherichia coli within heterosexual couples. Curr Issues Intest Microbiol 5:49-57.
54. Anastasi EM, Matthews B, Gundogdu A, Vollmerhausen TL, Ramos NL, Stratton H, Ahmed W, Katouli M. 2010. Prevalence and persistence of Escherichia coli strains with uropathogenic virulence characteristics in sewage treatment plants. Appl Environ Microbiol 76:5882-5886.
55. Mokracka J, Koczura R, Jablonska L, Kaznowski A. 2011. Phylogenetic groups, virulence genes and quinolone resistance of integron-bearing Escherichia coli strains isolated from a wastewater treatment plant. Antonie van Leeuwenhoek 99:817-824.
56. Dhanji H, Murphy NM, Akhigbe C, Doumith M, Hope R, Livermore DM, Woodford N. 2011. Isolation of fluoroquinoloneresistant O25b:H4-ST131 Escherichia coli with CTX-M-14 extendedspectrum beta-lactamase from UK river water. J Antimicrob Chemother 66:512-516.
57. Dolejska M, Frolkova P, Florek M, Jamborova I, Purgertova M, Kutilova I, Cizek A, Guenther S, Literak I. 2011. CTX-M-15-producing Escherichia coli clone B2-O25b-ST131 and Klebsiella spp. isolates in municipal wastewater treatment plant effluents. J Antimicrob Chemother 66:2784-2790.
58. Boczek La, Rice EW, Johnston B, Johnson JR. 2007. Occurrence of antibiotic-resistant uropathogenic Escherichia coli clonal group A in wastewater effluents. Appl Environ Microbiol 73:4180-4184.
59. Abhirosh C, Sherin V, Thomas AP, Hatha AA, Mazumder A. 2011. Potential public health significance of faecal contamination and multidrug-resistant Escherichia coli and Salmonella serotypes in a lake in India. Public health 125:377-379.
60. Hamelin K, Bruant G, El-Shaarawi A, Hill S, Edge Ta, Fairbrother J, Harel J, Maynard C, Masson L, Brousseau R. 2007. Occurrence of virulence and antimicrobial resistance genes in Escherichia coli isolates from different aquatic ecosystems within the St. Clair River and Detroit River areas. Appl Environ Microbiol 73:477-484.
61. Luna GM, Vignaroli C, Rinaldi C, Pusceddu A, Nicoletti L, Gabellini M, Danovaro R, Biavasco F. 2010. Extraintestinal Escherichia coli carrying virulence genes in coastal marine sediments. Appl Environ Microbiol 76:5659-5668.
62. Hamelin K, Bruant G, El-Shaarawi A, Hill S, Edge TA, Bekal S, Fairbrother JM, Harel J, Maynard C, Masson L, and Brousseau R. 2006. A virulence and antimicrobial resistance DNA microarray detects a high frequency of virulence genes in Escherichia coli from Great Lakes recreational waters. Appl Environ Microbiol 6:4200-4206.
63. Mühldorfer I, Blum G, Donohue-Rolfe A, Heier H, Olschläger T, Tschäpe H, Wallner U, Hacker J. 1996. Characterization of Escherichia coli strains isolated from environmental water habitats and from stool samples of healthy volunteers. Res Microbiol 147:625-635.
64. Ahmed W, Hodgers L, Masters N, Sidhu JPS, Katouli M, Toze S. 2011. Occurrence of intestinal and extraintestinal virulence genes in Escherichia coli isolates from rainwater tanks in Southeast Queensland, Australia. Appl Environ Microbiol 77:7394-7400.
65. Bonnedahl J, Drobni M, Gauthier-Clerc M, Hernandez J, Granholm S, Kayser Y, Melhus A, Kahlmeter G, Waldenström J, Johansson A, Olsen B. 2009. Dissemination of Escherichia coli with CTX-M type ESBL between humans and yellow-legged gulls in the south of France. PloS one 4:e5958.
66. Bonnedahl J, Drobni P, Johansson A, Hernandez J, Melhus A, Stedt J, Olsen B, Drobni M. 2010. Characterization, and comparison, of human clinical and black-headed gull (Larus ridibundus) extended-spectrum betalactamase-producing bacterial isolates from Kalmar, on the southeast coast of Sweden. J Antimicrob Chemother 65:1939-1944.
67. Edge T, Hill S. 2007. Multiple lines of evidence to identify the sources of fecal pollution at a freshwater beach in Hamilton Harbour, Lake Ontario. Water research 41:3585-3594.
68. Fogarty LR, Haack SK, Wolcott MJ, Whitman RL. 2003. Abundance and characteristics of the recreational water quality indicator bacteria Escherichia coli and enterococci in gull faeces. J Appl Microbiol 94:865-878.
69. Yan T, Hamilton MJ, Sadowsky MJ. 2007. High-throughput and quantitative procedure for determining sources of Escherichia coli in waterways by using host-specific DNA marker genes. Appl Environ Microbiol 73:890-896.
70. Johnson TJ, Wannemuehler Y, Johnson SJ, Stell AL, Doetkott C, Johnson JR, Kim KS, Spanjaard L, Nolan LK. 2008. Comparison of extraintestinal pathogenic Escherichia coli strains from human and avian sources reveals a mixed subset representing potential zoonotic pathogens. Appl Environ Microbiol 74:7043-7050.
71. Lau SH, Reddy S, Cheesbrough J, Bolton FJ, Willshaw G, Cheasty T, Fox AJ, Upton M. 2008. Major uropathogenic Escherichia coli strain isolated in the Northwest of England identified by multilocus sequence typing. J Clin Microbiol 46:1076-1080.
72. Moulin-Schouleur M, Répérant M, Laurent S, Brée A, Mignon-Grasteau S, Germon P, Rasschaert D, Schouler C. 2007. Extraintestinal pathogenic Escherichia coli strains of avian and human origin: link between phylogenetic relationships and common virulence patterns. J Clin Microbiol 45:3366-3376.
73. Tartof SY, Solberg OD, Manges AR, Riley W, Riley LW. 2005. Analysis of a uropathogenic Escherichia coli clonal group by multilocus sequence typing analysis. J Clin Microbiol 43:5860-5864.
74. Guenther S, Grobbel M, Lübke-Becker A, Goedecke A, Friedrich ND, Wieler LH, Ewers C. 2010. Antimicrobial resistance profiles of Escherichia coli from common European wild bird species. Vet Microbiol 144:219-225.
75. Guenther S, Ewers C, Wieler LH. 2011. Extended-spectrum betalactamases producing E. coli in wildlife, yet another form of environmental pollution? Front Microbiol 2:246.
76. Blanco J, Blanco M, Wong I, Blanco JE. 1993. Haemolytic Escherichia coli strains isolated from stools of healthy cats produce cytotoxic necrotizing factor type 1 (CNF1). Vet Microbiol 38:157-165.
77. Chérifi A, Contrepois M, Picard B, Goullet P, Orskov I, Orskov F. 1994. Clonal relationships among Escherichia coli serogroup O78 isolates from human and animal infections. J Clin Microbiol 32:1197-1202.
78. Low D, Braaten B, Ling G, Johnson D, Ruby A. 1988. Isolation and comparison of Escherichia coli strains from canine and human patients with urinary tract infections. Infect Immun 56:2601-2609.
79. Platell JL, Cobbold RN, Johnson JR, Heisig A, Heisig P, Clabots C, Kuskowski Ma, Trott DJ. 2011. Commonality among fluoroquinoloneresistant sequence type ST131 extraintestinal Escherichia coli isolates from humans and companion animals in Australia. Antimicrob Agents Chemother 55:3782-3787.
80. Platell JL, Cobbold RN, Johnson JR, Trott DJ. 2010. Clonal group distribution of fluoroquinolone-resistant Escherichia coli among humans and companion animals in Australia. J Antimicrob Chemother 65:1936-1938.
81. Johnson JR, Stell AL, Delavari P. 2001. Canine feces as a reservoir of extraintestinal pathogenic Escherichia coli. Infect Immun 69:1306-1314.
82. Gibson JS, Cobbold RN, Trott DJ. 2010. Characterization of multidrug-resistant Escherichia coli isolated from extraintestinal clinical infections in animals. J Med Microbiol 59:592-598.
83. Johnson JR, Kuskowski Ma, Menard M, Gajewski A, Xercavins M, Garau J. 2006. Similarity between human and chicken Escherichia coli isolates in relation to ciprofloxacin resistance status. J Infect Dis 194:71-78.
84. Murray AC, Kuskowski MA, Johnson JR. 2004. Virulence factors predict Escherichia coli colonization patterns among human and animal household members. Ann Intern Med 140:848-849.
85. Johnson J, Delavari P, Stell A, Whittam T, Carlino U, Russo T. 2001. Molecular comparison of extraintestinal Escherichia coli isolates of the same electrophoretic lineages from humans and domestic animals. J Infect Dis 183:154-159.
86. Johnson J, Stell A, Delavari P, Murray A, Kuskowski M, Gaastra W. 2001. Phylogenetic and pathotypic similarities between Escherichia coli isolates from urinary tract infections in dogs and extraintestinal infections in humans. J Infect Dis 183:897-906.
87. Tamang MD, Nam H-M, Jang G-C, Kim S-R, Chae MH, Jung S-C, Byun J-W, Park YH, Lim S-K. 2012. Molecular characterization of extended-spectrum-β-lactamase-producing and plasmid-mediated AmpC β-lactamase-producing Escherichia coli isolated from stray dogs in South Korea. Antimicrob Agents Chemother 56:2705-2712.
88. Harada K NY, Kataoka Y. 2012. Mechanisms of resistance to cephalosporin and emergence of O25b-ST131 clone harboring CTX-M-27 β-lactamase in extraintestinal pathogenic Escherichia coli from dogs and cats in Japan. Microbiol Immunol 56:5.
89. Ewers C, Grobbel M, Stamm I, Kopp Pa, Diehl I, Semmler T, Fruth A, Beutlich J, Guerra B, Wieler LH, Guenther S. 2010. Emergence of human pandemic O25:H4-ST131 CTX-M-15 extended-spectrum-beta-lactamaseproducing Escherichia coli among companion animals. J Antimicrob Chemother 65:651-660.
90. Johnson JR, Miller S, Johnston B, Clabots C, Debroy C. 2009. Sharing of Escherichia coli sequence type ST131 and other multidrug-resistant and urovirulent E. coli strains among dogs and cats within a household. J Clin Microbiol 47:3721-3725.
91. Johnson TJ, Kariyawasam S, Wannemuehler Y, Mangiamele P, Johnson SJ, Doetkott C, Skyberg Ja, Lynne AM, Johnson JR, Nolan LK. 2007. The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes. J Bacteriol 189:3228-3236.
92. Johnson TJ, Logue CM, Johnson JR, Kuskowski MA, Sherwood JS, Barnes HJ, DebRoy C, Wannemuehler YM, Obata-Yasuoka M, Spanjaard L, Nolan LK. 2012. Associations between multidrug resistance, plasmid content, and virulence potential among extraintestinal pathogenic and commensal Escherichia coli from humans and poultry. Foodborne Pathog Dis 9:37-46.
93. Mora A, López C, Dabhi G, Blanco M, Blanco JE, Alonso MP, Herrera A, Mamani R, Bonacorsi S, Moulin-Schouleur M, Blanco J. 2009. Extraintestinal pathogenic Escherichia coli O1:K1:H7/NM from human and avian origin: detection of clonal groups B2 ST95 and D ST59 with different host distribution. BMC microbiology 9:132.
94. Moulin-Schouleur M, Schouler C, Tailliez P, Kao M-R, Brée A, Germon P, Oswald E, Mainil J, Blanco M, Blanco J. 2006. Common virulence factors and genetic relationships between O18:K1:H7 Escherichia coli isolates of human and avian origin. J ClinMicrobiol 44:3484-3492.
95. Rodriguez-Siek KE, Giddings CW, Doetkott C, Johnson TJ, Fakhr MK, Nolan LK. 2005. Comparison of Escherichia coli isolates implicated in human urinary tract infection and avian colibacillosis. Microbiology 151:2097-2110.
96. Brinas L, Moreno MA, Zarazaga M, Porrero C, Saenz Y, Garcia M, Dominguez L, Torres C. 2003. Detection of CMY-2, CTX-M-14, and SHV-12 β-Lactamases in Escherichia coli fecal-sample isolates from healthy chickens. Antimicrob Agents Chemother 47:2056-2058.
97. Jakobsen L, Hammerum AM, Frimodt-Møller N. 2010. Detection of clonal group A Escherichia coli isolates from broiler chickens, broiler chicken meat, community-dwelling humans, and urinary tract infection (UTI) patients and their virulence in a mouse UTI model. Appl Environ Microbiol 76:8281-8284.
98. Jakobsen L, Spangholm DJ, Pedersen K, Jensen LB, Emborg HD, Agersø Y, Aarestrup FM, Hammerum AM, Frimodt-Møller N. 2010. Broiler chickens, broiler chicken meat, pigs and pork as sources of ExPEC related virulence genes and resistance in Escherichia coli isolates from community-dwelling humans and UTI patients. Int J Food Microbiol 142:264-272.
99. Johnson TJ, JordanD, Kariyawasam S, Stell AL, Bell NP, Wannemuehler YM, AlarcónCF, Li G, TivendaleKa, LogueCM, NolanLK. 2010. Sequence analysis and characterization of a transferable hybrid plasmid encoding multidrug resistance and enabling zoonotic potential for extraintestinal Escherichia coli. Infect Immun 78:1931-1942.
100. Overdevest I, Willemsen I, RijnsburgerM, Eustace A, Xu L, Hawkey P, Heck M, Savelkoul P, Vandenbroucke-Grauls C, van der Zwaluw K, Huijsdens X, Kluytmans J. 2011. Extended-spectrum β-lactamase genes of Escherichia coli in chicken meat and humans, The Netherlands. Emerg Infect Dis 17:1216-1222.
101. Jakobsen L, Garneau P, Bruant G, Harel J, Olsen S, Porsbo L, Hammerum A, Frimodt-Møller N. 2011. Is Escherichia coli urinary tract infection a zoonosis? Proof of direct link with production animals and meat. Eur J Clin Microbiol Infect Dis 31:1-9.
102. Tivendale KA, Logue CM, Kariyawasam S, Jordan D, Hussein A, Li G, Wannemuehler Y, Nolan LK. 2010. Avian-pathogenic Escherichia coli strains are similar to neonatal meningitis E. coli strains and are able to cause meningitis in the rat model of human disease. Infect Immun 78:3412-3419.
103. Skyberg JA, Johnson TJ, Johnson JR, Clabots C, Logue CM, Nolan LK. 2006. Acquisition of avian pathogenic Escherichia coli plasmids by a commensal E. coli isolate enhances its abilities to kill chicken embryos, grow in human urine, and colonize the murine kidney. Infect Immun 74:6287-6292.
104. Johnson JR, Delavari P, O'Bryan TT, Smith KE, Tatini S. 2005. Contamination of retail foods, particularly turkey, from community markets (Minnesota, 1999-2000) with antimicrobial-resistant and extraintestinal pathogenic Escherichia coli. Foodborne Path Dis 2:38-49.
105. Leverstein-van Hall Ma, Dierikx CM, Cohen Stuart J, Voets GM, van den Munckhof MP, van Essen-Zandbergen A, Platteel T, Fluit AC, van de Sande-Bruinsma N, Scharinga J, Bonten MJM, Mevius DJ. 2011. Dutch patients, retail chicken meat and poultry share the same ESBL genes, plasmids and strains. Clin Microbiol Infect 17:873-880.
106. Manges AR, Smith SP, Lau BJ, Nuval CJ, Eisenberg JNS, Dietrich PS, Riley LW. 2007. Retail meat consumption and the acquisition of antimicrobial resistant Escherichia coli causing urinary tract infections: a casecontrol study. Foodborne Path Dis 4:419-431.
107. O'May GA, Jacobsen SM, Longwell M, Stoodley P, Mobley HL, Shirtliff ME. 2009. The high-affinity phosphate transporter Pst in Proteus mirabilis HI4320 and its importance in biofilm formation. Microbiology 155:1523-1535.
108. Department of Health and Human Services. 2010. NARMS Retail Meat Annual Report. Food and Drug Administration. http://www.fda.gov/downloads/AnimalVeterinary/SafetyHealth/AntimicrobialResistance/NationalAntimicrobialResistanceMonitoringSystem/UCM293581.pdf
109. Lawrence J. 2006. Long Term Meat Production and Consumption Trends. http://www.thepoultrysite.com/articles/527/long-term-meatproduction-and-consumption-trends/
110. Coffman JR, Beran GW. 1999. Issues specific to antibiotics, p 142-178 In National Research Council: Committee on Drug Use in Food APoAH, Food Safety and Public Health. The use of drugs in food animals: Benefits and risks. The National Academy Press, Washington, DC
111. Aarestrup FM, Wegener HC, Collignon P. 2008. Resistance in bacteria of the food chain: epidemiology and control strategies. Expert Rev Anti Infect Ther 6:733-750.
112. Cogan TA, Bloomfield SF, Humphrey TJ. 1999. The effectiveness of hygiene procedures for prevention of cross-contamination from chicken carcases in the domestic kitchen. Letters in Applied Microbiology 29:354-358.
113. Linton AH, Howe K, Bennett PM, Richmond MH, Whiteside EJ. 1977. The colonization of the human gut by antibiotic resistant Escherichia coli from chickens. J Appl Bacteriol 43:465-469.
114. Corpet DE. 1988. Antibiotic resistance from food. N Engl J Med 318:1206-1207.
115. Xia X, Meng J, Zhao S, Bodeis-Jones S, Gaines SA, Ayers SL, McDermott PF. 2011. Identification and antimicrobial resistance of extraintestinal pathogenic Escherichia coli from retail meats. J Food Protect 74:38-44.
116. Johnson JR, McCabe JS, White DG, Johnston B, Kuskowski Ma, McDermott P. 2009. Molecular analysis of Escherichia coli from retail meats (2002-2004) from the United States National Antimicrobial Resistance Monitoring System. Clin Infect Dis 49:195-201.
117. Mora A, Herrera A, Mamani R, López C, Alonso MP, Blanco JE, Blanco M, Dahbi G, García-Garrote F, Pita JM, Coira A, Bernárdez MI, Blanco J. 2010. Recent emergence of clonal group O25b:K1:H4-B2-ST131 ibeA strains among Escherichia coli poultry isolates, including CTX-M-9-producing strains, and comparison with clinical human isolates. Appl Environ Microbiol 76:6991-6997.
118. Cortés P, Blanc V, Mora A, Dahbi G, Blanco JE, Blanco M, López C, Andreu A, Navarro F, Alonso MP, Bou G, Blanco J, Llagostera M. 2010. Isolation and characterization of potentially pathogenic antimicrobialresistant Escherichia coli strains from chicken and pig farms in Spain. Appl Environ Microbiol 76:2799-2805.
119. Dhanji H, Murphy NM, Doumith M, Durmus S, Lee SS, Hope R, Woodford N, Livermore DM. 2010. Cephalosporin resistance mechanisms in Escherichia coli isolated from raw chicken imported into the UK. J Antimicrob Chemother 65:2534-2537.
120. Warren RE, Ensor VM, O'Neill P, Butler V, Taylor J, Nye K, Harvey M, Livermore DM, Woodford N, Hawkey PM. 2008. Imported chicken meat as a potential source of quinolone-resistant Escherichia coli producing extended-spectrum β-lactamases in the UK. J Antimicrob Chemother 61:504-508.
121. Racicot Bergeron C, Prussing C, Boerlin P, Daignault D, Dutil L, Reid-Smith RJ, Zhanel GG, Manges AR. 2012. Chicken as reservoir for human extraintestinal pathogenic Escherichia coli, Canada. Emerg Infect Dis 18:415-421.
122. López-Cerero L, Egea P, Serrano L, Navarro D, Mora A, Blanco J, Doi Y, Paterson DL, Rodríguez-Baño J, Pascual A. 2011. Characterisation of clinical and food animal Escherichia coli isolates producing CTX-M-15 extended-spectrum β-lactamase belonging to ST410 phylogroup A. Int J Antimicrob Agents 37:365-367.
123. Jakobsen L, Garneau P, Kurbasic A, Bruant G, Stegger M, Harel J, Jensen KS, Brousseau R, Hammerum AM, Frimodt-Møller N. 2011. Microarray-based detection of extended virulence and antimicrobial resistance gene profiles in phylogroup B2 Escherichia coli of human, meat and animal origin. J Med Microbiol 60:1502-1511.
124. Johnson JR, Kuskowski Ma, Smith K, O'Bryan TT, Tatini S. 2005. Antimicrobial-resistant and extraintestinal pathogenic Escherichia coli in retail foods. J Infect Dis 191:1040-1049.
125. Manges AR, Smith SP, Lau BJ, Nuval CJ, Eisenberg JN, Dietrich PS, Riley LW. 2007. Retail meat consumption and the acquisition of antimicrobial resistant Escherichia coli causing urinary tract infections: A case-control study. Foodborne Pathog Dis 4:419-431.
126. Johnson JR, Sannes MR, Croy C, Johnston B, Clabots C, Kuskowski MA, Bender J, Smith KE, Winokur PL, Belongia EA. 2007. Antimicrobial drug-resistant Escherichia coli from humans and poultry products, Minnesota and Wisconsin, 2002-2004. Emerg Infect Dis 13: 838-846.
127. Trobos M, Christensen H, Sunde M, Nordentoft S, Agersø Y, Simonsen GS, Hammerum AM, Olsen JE. 2009. Characterization of sulphonamide-resistant Escherichia coli using comparison of sul2 gene sequences and multilocus sequence typing. Microbiology 155:831-836.
128. Johnson JR, Menard M, Johnston B, Kuskowski MA, Nichol K, Zhanel GG. 2009. Epidemic clonal groups of Escherichia coli as a cause of antimicrobial-resistant urinary tract infections in Canada (2002-2004). Antimicrob Agents Chemother 53:2733-2739.
129. Ramchandani M, Manges AR, DebRoy C, Smith SP, Johnson JR, Riley LW. 2005. Possible animal origin of human-associated, multidrugresistant, uropathogenic Escherichia coli. Clin Infect Dis 40:251-257.
130. Shere JA, Bartlett KJ, Kaspar CW. 1998. Longitudinal study of Escherichia coli O157:H7 dissemination on four dairy farms in Wisconsin. Appl Environ Microbiol 64:1390-1399.
131. Johnson JR, Johnston B, Clabots C, Kuskowski MA, Castanheira M. 2010. Escherichia coli sequence type ST131 as the major cause of serious multidrug-resistant E. coli infections in the United States. Clin Infect Dis 51:286-294.
132. Threlfall EJ, Ward LR, Frost JA, Willshaw GA. 2000. Spread of resistance from food animals to man-the UK experience. Acta Vet Scand Suppl 93:63-68.
133. Levy SB, FitzGerald GB, Macone AB. 1976. Changes in intestinal flora of farm personnel after introduction of a tetracycline-supplemented feed on a farm. N Engl J Med 295:583-588.
134. Grave K, Torren-Edo J, Mackay D. 2010. Comparison of the sales of veterinary antibacterial agents between 10 European countries. J Antimicrob Chemother 65:2037-2040.
135. Gilbert N. 2012. Rules tighten on use of antibiotics on farms. Nature 481:125.
136. Price LB, Graham JP, Lackey LG, Roess A, Vailes R, Silbergeld E. 2007. Elevated risk of carrying gentamicin-resistant Escherichia coli among U.S. poultry workers. Environ Health Perspect 115:1738-1742.
137. Moriel DG, Bertoldi I, Spagnuolo A, Marchi S, Rosini R, Nesta B, Pastorello I, Corea VAM, Torricelli G, Cartocci E, Savino S, Scarselli M, Dobrindt U, Hacker J, Tettelin H, Tallon LJ, Sullivan S, Wieler LH, Ewers C, Pickard D, Dougan G, Fontana MR, Rappuoli R, Pizza M, Serino L. 2010. Identification of protective and broadly conserved vaccine antigens from the genome of extraintestinal pathogenic Escherichia coli. Proc Natl Acad Sci USA 107:9072-9077.