-
1
-
-
69749096669
-
Isolation and molecular characterization of multidrug-resistant strains of escherichia coli and salmonella from retail chicken meat in japan
-
Ahmed AM, Shimabukuro H, and Shimamoto T. Isolation and molecular characterization of multidrug-resistant strains of Escherichia coli and Salmonella from retail chicken meat in Japan. J Food Sci 2009;74:M405-M410.
-
(2009)
J. Food Sci.
, vol.74
-
-
Ahmed, A.M.1
Shimabukuro, H.2
Shimamoto, T.3
-
2
-
-
70449395233
-
Pathotype and antibiotic resistance gene distributions of escherichia coli isolates from broiler chickens raised on antimicrobial-supplemented diets
-
Bonnet C, Diarrassouba F, Brousseau R, Masson L, Topp E, and Diarra MS. Pathotype and antibiotic resistance gene distributions of Escherichia coli isolates from broiler chickens raised on antimicrobial-supplemented diets. Appl Environ Microbiol 2009;75:6955-6962.
-
(2009)
Appl. Environ Microbiol.
, vol.75
, pp. 6955-6962
-
-
Bonnet, C.1
Diarrassouba, F.2
Brousseau, R.3
Masson, L.4
Topp, E.5
Diarra, M.S.6
-
3
-
-
75749089974
-
Blacmy-2-positive IncA C plasmids from Escherichia coli and Salmonella enterica are a distinct component of a larger lineage of plasmids
-
Call DR, Singer RS, Meng D, Broschat SL, Orfe LH, Anderson JM, Herndon DR, Kappmeyer LS, Daniels JB, and Besser TE. blaCMY-2-positive IncA/C plasmids from Escherichia coli and Salmonella enterica are a distinct component of a larger lineage of plasmids. Antimicrob Agents Chemother 2010;54:590-596.
-
(2010)
Antimicrob Agents Chemother
, vol.54
, pp. 590-596
-
-
Call, D.R.1
Singer, R.S.2
Meng, D.3
Broschat, S.L.4
Orfe, L.H.5
Anderson, J.M.6
Herndon, D.R.7
Kappmeyer, L.S.8
Daniels, J.B.9
Besser, T.E.10
-
4
-
-
27744453560
-
Identification of plasmids by PCR-based replicon typing
-
DOI 10.1016/j.mimet.2005.03.018, PII S0167701205001132
-
Carattoli A, Bertini A, Villa L, Falbo V, Hopkins KL, and Threlfall EJ. Identification of plasmids by PCR-based replicon typing. J Microbiol Methods 2005;63:219-228. (Pubitemid 41597366)
-
(2005)
Journal of Microbiological Methods
, vol.63
, Issue.3
, pp. 219-228
-
-
Carattoli, A.1
Bertini, A.2
Villa, L.3
Falbo, V.4
Hopkins, K.L.5
Threlfall, E.J.6
-
5
-
-
0033775633
-
Rapid and simple determination of the escherichia coli phylogenetic group
-
Clermont O, Bonacorsi S, and Bingen E. Rapid and simple determination of the Escherichia coli phylogenetic group. Appl Environ Microbiol 2000;66:4555-4558.
-
(2000)
Appl. Environ Microbiol.
, vol.66
, pp. 4555-4558
-
-
Clermont, O.1
Bonacorsi, S.2
Bingen, E.3
-
7
-
-
62349133345
-
Antimicrobial resistance in campylobacter salmonella and escherichia coli isolated from retail turkey meat from southern ontario canada
-
Cook A, Reid-Smith R, Irwin R, McEwen SA, Valdivieso-Garcia A, and Ribble C. Antimicrobial resistance in Campylobacter, Salmonella, and Escherichia coli isolated from retail turkey meat from southern Ontario, Canada. J Food Prot 2009;72:473-481.
-
(2009)
J. Food Prot.
, vol.72
, pp. 473-481
-
-
Cook, A.1
Reid-Smith, R.2
Irwin, R.3
McEwen, S.A.4
Valdivieso-Garcia, A.5
Ribble, C.6
-
8
-
-
34250354432
-
Antibiotic resistance and virulence genes in commensal Escherichia coli and Salmonella isolates from commercial broiler chicken farms
-
Diarrassouba F, Diarra MS, Bach S, Delaquis P, Pritchard J, Topp E, and Skura BJ. Antibiotic resistance and virulence genes in commensal Escherichia coli and Salmonella isolates from commercial broiler chicken farms. J Food Prot 2007;70:1316-1327. (Pubitemid 46919649)
-
(2007)
Journal of Food Protection
, vol.70
, Issue.6
, pp. 1316-1327
-
-
Diarrassouba, F.1
Diarra, M.S.2
Bach, S.3
Delaquis, P.4
Pritchard, J.5
Topp, E.6
Skura, B.J.7
-
9
-
-
34247578540
-
Avian pathogenic, uropathogenic, and newborn meningitis-causing Escherichia coli: How closely related are they?
-
DOI 10.1016/j.ijmm.2007.01.003, PII S1438422107000173
-
Ewers C, Li G, Wilking H, Kiessling S, Alt K, Antao EM, Laturnus C, Diehl I, Glodde S, Homeier T, Bohnke U, Steinruck H, Philipp HC, and Wieler LH. Avian pathogenic, uropathogenic, and newborn meningitis-causing Escherichia coli: how closely related are they? Int J Med Microbiol 2007;297:163-176. (Pubitemid 46678924)
-
(2007)
International Journal of Medical Microbiology
, vol.297
, Issue.3
, pp. 163-176
-
-
Ewers, C.1
Li, G.2
Wilking, H.3
Kiessling, S.4
Alt, K.5
Antao, E.-M.6
Laturnus, C.7
Diehl, I.8
Glodde, S.9
Homeier, T.10
Bohnke, U.11
Steinruck, H.12
Philipp, H.-C.13
Wieler, L.H.14
-
10
-
-
70149099368
-
Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic escherichia coli strains in salmonella enterica serovar kentucky isolates from poultry
-
Fricke WF, McDermott PF, Mammel MK, Zhao S, Johnson TJ, Rasko DA, Fedorka-Cray PJ, Pedroso A, Whichard JM, Leclerc JE, White DG, Cebula TA, and Ravel J. Antimicrobial resistance- conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry. Appl Environ Microbiol 2009a;75:5963-5971.
-
(2009)
Appl. Environ Microbiol.
, vol.75
, pp. 5963-5971
-
-
Fricke, W.F.1
McDermott, P.F.2
Mammel, M.K.3
Zhao, S.4
Johnson, T.J.5
Rasko, D.A.6
Fedorka-Cray, P.J.7
Pedroso, A.8
Whichard, J.M.9
Leclerc, J.E.10
White, D.G.11
Cebula, T.A.12
Ravel, J.13
-
11
-
-
67749120335
-
Comparative genomics of the IncA C multidrug resistance plasmid family
-
Fricke WF, Welch TJ, McDermott PF, Mammel MK, Leclerc JE, White DG, Cebula TA, and Ravel J. Comparative genomics of the IncA/C multidrug resistance plasmid family. J Bacteriol 2009b;191:4750-4757.
-
(2009)
J. Bacteriol.
, vol.191
, pp. 4750-4757
-
-
Fricke, W.F.1
Welch, T.J.2
McDermott, P.F.3
Mammel, M.K.4
Leclerc, J.E.5
White, D.G.6
Cebula, T.A.7
Ravel, J.8
-
12
-
-
44449143907
-
Multilocus sequence typing of IncI1 plasmids carrying extended-spectrum β-lactamases in Escherichia coli and Salmonella of human and animal origin
-
DOI 10.1093/jac/dkn131
-
Garcia-Fernandez A, Chiaretto G, Bertini A, Villa L, Fortini D, Ricci A, and Carattoli A. Multilocus sequence typing of IncI1 plasmids carrying extended-spectrum beta-lactamases in Escherichia coli and Salmonella of human and animal origin. J Antimicrob Chemother 2008;61:1229-1233. (Pubitemid 351753586)
-
(2008)
Journal of Antimicrobial Chemotherapy
, vol.61
, Issue.6
, pp. 1229-1233
-
-
Garcia-Fernandez, A.1
Chiaretto, G.2
Bertini, A.3
Villa, L.4
Fortini, D.5
Ricci, A.6
Carattoli, A.7
-
13
-
-
12244274639
-
Extended virulence genotype of pathogenic Escherichia coli isolates carrying the afa-8 operon: Evidence of similarities between isolates from humans and animals with extraintestinal infections
-
DOI 10.1128/JCM.41.1.218-226.2003
-
Girardeau JP, Lalioui L, Said AM, De Champs C, and Le Bouguenec C. Extended virulence genotype of pathogenic Escherichia coli isolates carrying the afa-8 operon: evidence of similarities between isolates from humans and animals with extraintestinal infections. J Clin Microbiol 2003;41:218-226. (Pubitemid 36098580)
-
(2003)
Journal of Clinical Microbiology
, vol.41
, Issue.1
, pp. 218-226
-
-
Girardeau, J.P.1
Lalioui, L.2
Mohamed Ou Said, A.3
De Champs, C.4
Le Bouguenec, C.5
-
14
-
-
77952357309
-
Escherichia coli isolates from broiler chicken meat broiler chickens pork and pigs share phylogroups and antimicrobial resistance with community-dwelling humans and patients with urinary tract infection
-
Jakobsen L, Kurbasic A, Skjot-Rasmussen L, Ejrnaes K, Porsbo LJ, Pedersen K, Jensen LB, Emborg HD, Agerso Y, Olsen KE, Aarestrup FM, Frimodt-Moller N, and Hammerum AM. Escherichia coli isolates from broiler chicken meat, broiler chickens, pork, and pigs share phylogroups and antimicrobial resistance with community-dwelling humans and patients with urinary tract infection. Foodborne Pathog Dis 2010;7: 537-547.
-
(2010)
Foodborne Pathog. Dis.
, vol.7
, pp. 537-547
-
-
Jakobsen, L.1
Kurbasic, A.2
Skjot-Rasmussen, L.3
Ejrnaes, K.4
Porsbo, L.J.5
Pedersen, K.6
Jensen, L.B.7
Emborg, H.D.8
Agerso, Y.9
Olsen, K.E.10
Aarestrup, F.M.11
Frimodt-Moller, N.12
Hammerum, A.M.13
-
15
-
-
15744385120
-
Contamination of retail foods, particularly Turkey, from community markets (Minnesota, 1999-2000) with antimicrobial-resistant and extraintestinal pathogenic Escherichia coli
-
DOI 10.1089/fpd.2005.2.38
-
Johnson JR, Delavari P, O'Bryan TT, Smith KE, and Tatini S. Contamination of retail foods, particularly turkey, from community markets (Minnesota, 1999-2000) with antimicrobial- resistant and extraintestinal pathogenic Escherichia coli. Foodborne Pathog Dis 2005a;2:38-49. (Pubitemid 40411232)
-
(2005)
Foodborne Pathogens and Disease
, vol.2
, Issue.1
, pp. 38-49
-
-
Johnson, J.R.1
Delavari, P.2
O'Bryan, T.T.3
Smith, K.E.4
Tatini, S.5
-
16
-
-
33748663761
-
Complete DNA sequence of a ColBM plasmid from avian pathogenic Escherichia coli suggests that it evolved from closely related ColV virulence plasmids
-
DOI 10.1128/JB.00204-06
-
Johnson TJ, Johnson SJ, and Nolan LK. Complete DNA sequence of a ColBM plasmid from avian pathogenic Escherichia coli suggests that it evolved from closely related ColV virulence plasmids. J Bacteriol 2006a;188:5975-5983. (Pubitemid 44384106)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.16
, pp. 5975-5983
-
-
Johnson, T.J.1
Johnson, S.J.2
Nolan, L.K.3
-
17
-
-
34247846229
-
The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes
-
DOI 10.1128/JB.01726-06
-
Johnson TJ, Kariyawasam S, Wannemuehler Y, Mangiamele P, Johnson SJ, Doetkott C, Skyberg JA, Lynne AL, Johnson JR, and Nolan LK. The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes. J Bacteriol 2007a;189:3228-3236. (Pubitemid 46697413)
-
(2007)
Journal of Bacteriology
, vol.189
, Issue.8
, pp. 3228-3236
-
-
Johnson, T.J.1
Kariyawasam, S.2
Wannemuehler, Y.3
Mangiamele, P.4
Johnson, S.J.5
Doetkott, C.6
Skyberg, J.A.7
Lynne, A.M.8
Johnson, J.R.9
Nolan, L.K.10
-
18
-
-
8444242084
-
Virulence characteristics and phylogenetic background of multidrug-resistant and antimicrobial-susceptible clinical isolates of Escherichia coli from across the United States, 2000-2001
-
DOI 10.1086/425018
-
Johnson JR, Kuskowski MA, Gajewski A, Sahm DF, and Karlowsky JA. Virulence characteristics and phylogenetic background of multidrug-resistant and antimicrobial-susceptible clinical isolates of Escherichia coli from across the United States, 2000-2001. J Infect Dis 2004;190:1739-1744. (Pubitemid 39487816)
-
(2004)
Journal of Infectious Diseases
, vol.190
, Issue.10
, pp. 1739-1744
-
-
Johnson, J.R.1
Kuskowski, M.A.2
Gajewski, A.3
Sahm, D.F.4
Karlowsky, J.A.5
-
19
-
-
11244270819
-
Virulence genotype and phylogenetic origin in relation to antibiotic resistance profile among Escherichia coli urine sample isolates from Israeli women with acute uncomplicated cystitis
-
DOI 10.1128/AAC.49.1.26-31.2005
-
Johnson JR, Kuskowski MA, O'Bryan TT, Colodner R, and Raz R. Virulence genotype and phylogenetic origin in relation to antibiotic resistance profile among Escherichia coli urine sample isolates from Israeli women with acute uncomplicated cystitis. Antimicrob Agents Chemother 2005b;49:26-31. (Pubitemid 40065768)
-
(2005)
Antimicrobial Agents and Chemotherapy
, vol.49
, Issue.1
, pp. 26-31
-
-
Johnson, J.R.1
Kuskowski, M.A.2
O'Bryan, T.T.3
Colodner, R.4
Raz, R.5
-
20
-
-
0037093824
-
Epidemiological correlates of virulence genotype and phylogenetic background among Escherichia coli blood isolates from adults with diverse-source bacteremia
-
DOI 10.1086/340506
-
Johnson JR, Kuskowski MA, O'Bryan TT, and Maslow JN. Epidemiological correlates of virulence genotype and phylogenetic background among Escherichia coli blood isolates from adults with diverse-source bacteremia. J Infect Dis 2002a;185: 1439-1447. (Pubitemid 34507966)
-
(2002)
Journal of Infectious Diseases
, vol.185
, Issue.10
, pp. 1439-1447
-
-
Johnson, J.R.1
Kuskowski, M.A.2
O'Bryan, T.T.3
Maslow, J.N.4
-
21
-
-
70349324240
-
Examination of the source and extended virulence genotypes of escherichia coli contaminating retail poultry meat
-
Johnson TJ, Logue CM, Wannemuehler Y, Kariyawasam S, Doetkott C, Debroy C, White DG, and Nolan LK. Examination of the source and extended virulence genotypes of Escherichia coli contaminating retail poultry meat. Foodborne Pathog Dis 2009a;6:657-667.
-
(2009)
Foodborne Pathog Dis.
, vol.6
, pp. 657-667
-
-
Johnson, T.J.1
Logue, C.M.2
Wannemuehler, Y.3
Kariyawasam, S.4
Doetkott, C.5
Debroy, C.6
White, D.G.7
Nolan, L.K.8
-
22
-
-
67651113451
-
Molecular analysis of escherichia coli from retail meats 2002-2004 from the united states national antimicrobial resistance monitoring system
-
Johnson JR, McCabe JS, White DG, Johnston B, Kuskowski MA, and McDermott P. Molecular Analysis of Escherichia coli from retail meats (2002-2004) from the United States National Antimicrobial Resistance Monitoring System. Clin Infect Dis 2009b; 49:195-201.
-
(2009)
Clin. Infect Dis.
, vol.49
, pp. 195-201
-
-
Johnson, J.R.1
McCabe, J.S.2
White, D.G.3
Johnston, B.4
Kuskowski, M.A.5
McDermott, P.6
-
23
-
-
71449086126
-
Pathogenomics of the virulence plasmids of escherichia coli
-
Johnson TJ and Nolan LK. Pathogenomics of the virulence plasmids of Escherichia coli. Microbiol Mol Biol Rev 2009;73: 750-774.
-
(2009)
Microbiol. Mol. Biol. Rev.
, vol.73
, pp. 750-774
-
-
Johnson, T.J.1
Nolan, L.K.2
-
24
-
-
0037086518
-
Phylogenetic distribution of virulence-associated genes among Escherichia coli isolates associated with neonatal bacterial meningitis in the Netherlands
-
DOI 10.1086/339343
-
Johnson JR,Oswald E,O'Bryan TT, KuskowskiMA, and Spanjaard L. Phylogenetic distribution of virulence-associated genes among Escherichia coli isolates associated with neonatal bacterial meningitis in the Netherlands. J Infect Dis 2002b;185:774-784. (Pubitemid 34226205)
-
(2002)
Journal of Infectious Diseases
, vol.185
, Issue.6
, pp. 774-784
-
-
Johnson, J.R.1
Oswald, E.2
O'Bryan, T.T.3
Kuskowski, M.A.4
Spanjaard, L.5
-
25
-
-
0036010036
-
Extraintestinal pathogenic Escherichia coli: "The other bad E coli"
-
DOI 10.1067/mlc.2002.121550
-
Johnson JR and Russo TA. Extraintestinal pathogenic Escherichia coli: "the other bad E coli". J Lab Clin Med 2002;139:155-162. (Pubitemid 34286952)
-
(2002)
Journal of Laboratory and Clinical Medicine
, vol.139
, Issue.3
, pp. 155-162
-
-
Johnson, J.R.1
Russo, T.A.2
-
26
-
-
34250021002
-
Antimicrobial drug-resistant Escherichia coli from humans and poultry products, Minnesota and Wisconsin, 2002-2004
-
Johnson JR, Sannes MR, Croy C, Johnston B, Clabots C, Kuskowski MA, Bender J, Smith KE, Winokur PL, and Belongia EA. Antimicrobial drug-resistant Escherichia coli from humans and poultry products, Minnesota and Wisconsin, 2002-2004. Emerg Infect Dis 2007b;13:838-846. (Pubitemid 46890136)
-
(2007)
Emerging Infectious Diseases
, vol.13
, Issue.6
, pp. 838-846
-
-
Johnson, J.R.1
Sannes, M.R.2
Croy, C.3
Johnston, B.4
Clabots, C.5
Kuskowski, M.A.6
Bender, J.7
Smith, K.E.8
Winokur, P.L.9
Belongia, E.A.10
-
27
-
-
27644465186
-
DNA sequence and comparative genomics of pAPEC-O2-R, an avian pathogenic Escherichia coli transmissible R plasmid
-
DOI 10.1128/AAC.49.11.4681-4688.2005
-
Johnson TJ, Siek KE, Johnson SJ, and Nolan LK. DNA sequence and comparative genomics of pAPEC-O2-R, an avian pathogenic Escherichia coli transmissible R plasmid. Antimicrob Agents Chemother 2005c;49:4681-4688. (Pubitemid 41552600)
-
(2005)
Antimicrobial Agents and Chemotherapy
, vol.49
, Issue.11
, pp. 4681-4688
-
-
Johnson, T.J.1
Siek, K.E.2
Johnson, S.J.3
Nolan, L.K.4
-
28
-
-
30744441214
-
DNA sequence of a ColV plasmid and prevalence of selected plasmid-encoded virulence genes among avian Escherichia coli strains
-
DOI 10.1128/JB.188.2.745-758.2006
-
Johnson TJ, Siek KE, Johnson SJ, and Nolan LK. DNA sequence of a ColV plasmid and prevalence of selected plasmidencoded virulence genes among avian Escherichia coli strains. J Bacteriol 2006b;188:745-758. (Pubitemid 43100561)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.2
, pp. 745-758
-
-
Johnson, T.J.1
Siek, K.E.2
Johnson, S.J.3
Nolan, L.K.4
-
29
-
-
0033963533
-
Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise
-
DOI 10.1086/315217
-
Johnson JR and Stell AL. Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise. J Infect Dis 2000;181:261-272. (Pubitemid 30049057)
-
(2000)
Journal of Infectious Diseases
, vol.181
, Issue.1
, pp. 261-272
-
-
Johnson, J.R.1
Stell, A.L.2
-
30
-
-
33947388397
-
Plasmid replicon typing of commensal and pathogenic Escherichia coli isolates
-
DOI 10.1128/AEM.02171-06
-
Johnson TJ, Wannemuehler YM, Johnson SJ, Logue CM, White DG, Doetkott C, and Nolan LK. Plasmid replicon typing of commensal and pathogenic Escherichia coli isolates. Appl Environ Microbiol 2007c;73:1976-1983. (Pubitemid 46449082)
-
(2007)
Applied and Environmental Microbiology
, vol.73
, Issue.6
, pp. 1976-1983
-
-
Johnson, T.J.1
Wannemuehler, Y.M.2
Johnson, S.J.3
Logue, C.M.4
White, D.G.5
Doetkott, C.6
Nolan, L.K.7
-
31
-
-
55949112407
-
Comparison of extraintestinal pathogenic escherichia coli strains from human and avian sources reveals a mixed subset representing potential zoonotic pathogens
-
Johnson TJ, Wannemuehler Y, Johnson SJ, Stell AL, Doetkott C, Johnson JR, Kim KS, Spanjaard L, and Nolan LK. Comparison of extraintestinal pathogenic Escherichia coli strains from human and avian sources reveals a mixed subset representing potential zoonotic pathogens. Appl Environ Microbiol 2008;74: 7043-7050
-
(2008)
Appl. Environ Microbiol.
, vol.74
, pp. 7043-7050
-
-
Johnson, T.J.1
Wannemuehler, Y.2
Johnson, S.J.3
Stell, A.L.4
Doetkott, C.5
Johnson, J.R.6
Kim, K.S.7
Spanjaard, L.8
Nolan, L.K.9
-
32
-
-
33750588439
-
Complete DNA sequence, comparative genomics, and prevalence of an IncHI2 plasmid occurring among extraintestinal pathogenic Escherichia coli isolates
-
DOI 10.1128/AAC.00569-06
-
Johnson TJ, Wannemeuhler YM, Scaccianoce JA, Johnson SJ, and Nolan LK. Complete DNA sequence, comparative genomics, and prevalence of an IncHI2 plasmid occurring among extraintestinal pathogenic Escherichia coli isolates. Antimicrob Agents Chemother 2006c;50:3929-3933. (Pubitemid 44684920)
-
(2006)
Antimicrobial Agents and Chemotherapy
, vol.50
, Issue.11
, pp. 3929-3933
-
-
Johnson, T.J.1
Wannemeuhler, Y.M.2
Scaccianoce, J.A.3
Johnson, S.J.4
Nolan, L.K.5
-
33
-
-
24044504719
-
Pathogenic Escherichia coli
-
DOI 10.1016/j.ijmm.2005.06.008, PII S1438422105000913
-
Kaper JB. Pathogenic Escherichia coli. Int J Med Microbiol 2005;295:355-356. (Pubitemid 41225450)
-
(2005)
International Journal of Medical Microbiology
, vol.295
, Issue.6-7
, pp. 355-356
-
-
Kaper, J.B.1
-
34
-
-
49449106924
-
Antimicrobial resistance and association with class 1 integrons in escherichia coli isolated from turkey meat products
-
Khaitsa ML, Oloya J, Doetkott D, and Kegode R. Antimicrobial resistance and association with class 1 integrons in Escherichia coli isolated from turkey meat products. J Food Prot 2008; 71:1679-1684.
-
(2008)
J. Food Prot.
, vol.71
, pp. 1679-1684
-
-
Khaitsa, M.L.1
Oloya, J.2
Doetkott, D.3
Kegode, R.4
-
35
-
-
0032883206
-
Transposon Tn21, flagship of the floating genome
-
Liebert CA, Hall RM, and Summers AO. Transposon Tn21, flagship of the floating genome. Microbiol Mol Biol Rev 1999; 63:507-522. (Pubitemid 29422780)
-
(1999)
Microbiology and Molecular Biology Reviews
, vol.63
, Issue.3
, pp. 507-522
-
-
Liebert, C.A.1
Hall, R.M.2
Summers, A.O.3
-
36
-
-
57649228983
-
Replicon typing of plasmids in Escherichia coli producing extended-spectrum beta-lactamases
-
Marcade G, Deschamps C, Boyd A, Gautier V, Picard B, Branger C, Denamur E, and Ariet G. Replicon typing of plasmids in Escherichia coli producing extended-spectrum beta-lactamases. J Antimicrob Chemother 2009;63:67-71.
-
(2009)
J. Antimicrob Chemother
, vol.63
, pp. 67-71
-
-
Marcade, G.1
Deschamps, C.2
Boyd, A.3
Gautier, V.4
Picard, B.5
Branger, C.6
Denamur, E.7
Ariet, G.8
-
37
-
-
36549006034
-
Retail meat consumption and the acquisition of antimicrobial resistant Escherichia coli causing urinary tract infections: A case-control study
-
DOI 10.1089/fpd.2007.0026
-
Manges AR, Smith SP, Lau BJ, Nuval CJ, Eisenberg JN, Dietrich PS, and Riley LW. Retail meat consumption and the acquisition of antimicrobial resistant Escherichia coli causing urinary tract infections: a case-control study. Foodborne Pathog Dis 2007;4:419-431. (Pubitemid 350182389)
-
(2007)
Foodborne Pathogens and Disease
, vol.4
, Issue.4
, pp. 419-431
-
-
Manges, A.R.1
Smith, S.P.2
Lau, B.J.3
Nuval, C.J.4
Eisenberg, J.N.S.5
Dietrich, P.S.6
Riley, L.W.7
-
38
-
-
58849136299
-
Full sequence and comparative analysis of the plasmid pAPEC-1 of avian pathogenic E coli chi7122 O78:K80:H9
-
Mellata M, Touchman JW, and Curtiss R. Full sequence and comparative analysis of the plasmid pAPEC-1 of avian pathogenic E. coli chi7122 (O78:K80:H9). PLoS One 2009; 4:e4232.
-
(2009)
PLoS One
, vol.4
-
-
Mellata, M.1
Touchman, J.W.2
Curtiss, R.3
-
39
-
-
33646235903
-
Antimicrobial resistance of escherichia coli isolates from broiler chickens and humans
-
Miles TD, McLaughlin W, and Brown PD. Antimicrobial resistance of Escherichia coli isolates from broiler chickens and humans. BMC Vet Res 2006;2:7.
-
(2006)
BMC Vet. Res.
, vol.2
, pp. 7
-
-
Miles, T.D.1
McLaughlin, W.2
Brown, P.D.3
-
40
-
-
0036736565
-
Vaginal escherichia coli share common virulence factor profiles serotypes and phylogeny with other extraintestinal E coli
-
Obata-Yasuoka M, Ba-Thein W, Tsukamoto T, Yoshikawa H, and Hayashi H. Vaginal Escherichia coli share common virulence factor profiles, serotypes and phylogeny with other extraintestinal E. coli. Microbiology 2002;148:2745-2752.
-
(2002)
Microbiology
, vol.148
, pp. 2745-2752
-
-
Obata-Yasuoka, M.1
Ba-Thein, W.2
Tsukamoto, T.3
Yoshikawa, H.4
Hayashi, H.5
-
41
-
-
54349084886
-
Antimicrobial susceptibilities serogroups and molecular characterization of avian pathogenic escherichia coli isolates in Japan
-
Ozawa M, Harada K, Kojima A, Asai T, and Sameshima T. Antimicrobial susceptibilities, serogroups, and molecular characterization of avian pathogenic Escherichia coli isolates in Japan. Avian Dis 2008;52:392-397.
-
(2008)
Avian. Dis.
, vol.52
, pp. 392-397
-
-
Ozawa, M.1
Harada, K.2
Kojima, A.3
Asai, T.4
Sameshima, T.5
-
42
-
-
33644871292
-
GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research
-
DOI 10.1111/j.1471-8286.2005.01155.x
-
Peakall R and Smouse, P.E. Genalex 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Res 2006;6:288-295. (Pubitemid 43373825)
-
(2006)
Molecular Ecology Notes
, vol.6
, Issue.1
, pp. 288-295
-
-
Peakall, R.1
Smouse, P.E.2
-
43
-
-
38749124408
-
Elevated risk of carrying gentamicin-resistant escherichia coli among U.S poultry workers
-
Price LB, Graham JP, Lackey LG, Roess A, Vailes R, and Silbergeld E. Elevated risk of carrying gentamicin-resistant Escherichia coli among U.S. poultry workers. Environ Health Perspect 2007;115:1738-1742.
-
(2007)
Environ Health Perspect
, vol.115
, pp. 1738-1742
-
-
Price, L.B.1
Graham, J.P.2
Lackey, L.G.3
Roess, A.4
Vailes, R.5
Silbergeld, E.6
-
44
-
-
21344446566
-
Comparison of Escherichia coli isolates implicated in human urinary tract infection and avian colibacillosis
-
DOI 10.1099/mic.0.27499-0
-
Rodriguez-Siek KE, Giddings CW, Doetkott C, Johnson TJ, Fakhr MK, and Nolan LK. Comparison of Escherichia coli isolates implicated in human urinary tract infection and avian colibacillosis. Microbiology 2005a;151:2097-2110. (Pubitemid 40909051)
-
(2005)
Microbiology
, vol.151
, Issue.6
, pp. 2097-2110
-
-
Rodriguez-Siek, K.E.1
Giddings, C.W.2
Doetkott, C.3
Johnson, T.J.4
Fakhr, M.K.5
Nolan, L.K.6
-
45
-
-
14844360359
-
Characterizing the APEC pathotype
-
DOI 10.1051/vetres:2004057
-
Rodriguez-Siek KE, Giddings CW, Doetkott C, Johnson TJ, and Nolan LK. Characterizing the APEC pathotype. Vet Res 2005b;36:241-256. (Pubitemid 40352602)
-
(2005)
Veterinary Research
, vol.36
, Issue.2
, pp. 241-256
-
-
Rodriguez-Siek, K.E.1
Giddings, C.W.2
Doetkott, C.3
Johnson, T.J.4
Nolan, L.K.5
-
46
-
-
77954142279
-
Complete genome sequence of the incompatibility group I1 plasmid R64
-
Sampei G, Furuya N, Tachibana K, Saitou, Y, Suzuki T, Mizobuchi K, and Komano T. Complete genome sequence of the incompatibility group I1 plasmid R64. Plasmid 2010;64:92-103.
-
(2010)
Plasmid
, vol.64
, pp. 92-103
-
-
Sampei, G.1
Furuya, N.2
Tachibana, K.3
Saitou, Y.4
Suzuki, T.5
Mizobuchi, K.6
Komano, T.7
-
47
-
-
0141940683
-
Isolation of antimicrobial-resistant Escherichia coli from retail meats purchased in Greater Washington, DC, USA
-
DOI 10.1016/S0168-1605(02)00508-1
-
Schroeder CM, White DG, Ge B, Zhang Y, McDermott PF, Ayers S, Zhao S, and Meng J. Isolation of antimicrobial-resistant Escherichia coli from retail meats purchased in Greater Washington, DC, USA. Int J Food Microbiol 2003;85:197-202. (Pubitemid 37329378)
-
(2003)
International Journal of Food Microbiology
, vol.85
, Issue.1-2
, pp. 197-202
-
-
Schroeder, C.M.1
White, D.G.2
Ge, B.3
Zhang, Y.4
McDermott, P.F.5
Ayers, S.6
Zhao, S.7
Meng, J.8
-
48
-
-
33746050389
-
Potential impacts of antibiotic use in poultry production
-
DOI 10.1637/7569-033106R.1
-
Singer RS and Hofacre CL. Potential impacts of antibiotic use in poultry production. Avian Dis 2006;50:161-172. (Pubitemid 44077074)
-
(2006)
Avian Diseases
, vol.50
, Issue.2
, pp. 161-172
-
-
Singer, R.S.1
Hofacre, C.L.2
-
49
-
-
77955289397
-
Complete nucleotide sequence of CTX-M-15-plasmids from clinical escherichia coli isolates: Insertional events of transposons and insertion sequences
-
Smet A, Van Nieuwerburgh F, Vandekerckhove TT, Martel A, Deforce D, Butaye P, and Haesebrouck F. Complete nucleotide sequence of CTX-M-15-plasmids from clinical Escherichia coli isolates: insertional events of transposons and insertion sequences. PLoS One 2010;5:e11202.
-
(2010)
PLoS One
, vol.5
-
-
Smet, A.1
Van Nieuwerburgh, F.2
Vandekerckhove, T.T.3
Martel, A.4
Deforce, D.5
Butaye, P.6
Haesebrouck, F.7
-
50
-
-
33947256461
-
Impact of antimicrobial usage on antimicrobial resistance in commensal Escherichia coli strains colonizing broiler chickens
-
DOI 10.1128/AEM.01193-06
-
Smith JL, Drum DJ, Dai Y, Kim M, Sanchez S, Maurer JJ, Hofacre CL, and Lee MD. Impact of antimicrobial usage on antimicrobial resistance in commensal Escherichia coli strains colonizing broiler chickens. Appl Environ Microbiol 2007a;73: 1404-1414. (Pubitemid 46417862)
-
(2007)
Applied and Environmental Microbiology
, vol.73
, Issue.5
, pp. 1404-1414
-
-
Smith, J.L.1
Drum, D.J.V.2
Dai, Y.3
Kim, J.M.4
Sanchez, S.5
Maurer, J.J.6
Hofacre, C.L.7
Lee, M.D.8
-
53
-
-
78049418891
-
Predicting plasmid promiscuity based on genomic signature
-
Suzuki H, Yano H, Brown CJ, and Top EM. Predicting plasmid promiscuity based on genomic signature. J Bacteriol 2010;192: 6045-6055.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 6045-6055
-
-
Suzuki, H.1
Yano, H.2
Brown, C.J.3
Top, E.M.4
-
54
-
-
0023506940
-
Incompatibility group P plasmids: Genetics evolution and use in genetic manipulation
-
Thomas CM and Smith CA. Incompatibility group P plasmids: genetics, evolution, and use in genetic manipulation. Annu Rev Microbiol 1987;41:77-101.
-
(1987)
Annu. Rev. Microbiol.
, vol.41
, pp. 77-101
-
-
Thomas, C.M.1
Smith, C.A.2
-
55
-
-
77953712991
-
Characterization of multidrug-resistant qnrB2-positive and extended-spectrum-beta-lactamase-producing salmonella concord and salmonella senftenberg isolates
-
Veldman K, Dierikx C, van Essen-Zandbergen A, van Pelt W, and Mevius D. Characterization of multidrug-resistant, qnrB2-positive and extended-spectrum- beta-lactamase-producing Salmonella Concord and Salmonella Senftenberg isolates. J Antimicrob Chemother 2010;65:872-875.
-
(2010)
J. Antimicrob Chemother
, vol.65
, pp. 872-875
-
-
Veldman, K.1
Dierikx, C.2
Van Essen-Zandbergen, A.3
Van Pelt, W.4
Mevius, D.5
-
56
-
-
34548629281
-
Quantitative resistance level (MIC) of bacterial pathogens (Escherichia coli, Pasteurella multocida, Pseudomonas aeruginosa, Salmonella sp., Staphylococcus aureus) isolated from chickens and turkeys: National Resistance Monitoring by the BVL 2004/2005
-
DOI 10.2376/0005-9366-120-452
-
Wallmann J, Schroer U, and Kaspar H. Quantitative resistancelevel (MIC) of bacterial pathogens (Escherichia coli, Pasteurella multocida, Pseudomonas aeruginosa, Salmonella sp., Staphylococcus aureus) isolated from chickens and turkeys: national resistance monitoring by the BVL 2004/2005. Berl Munch Tierarztl Wochenschr 2007;120:452-463. (Pubitemid 47400717)
-
(2007)
Berliner und Munchener Tierarztliche Wochenschrift
, vol.120
, Issue.9-10
, pp. 452-463
-
-
Wallmann, J.1
Schroer, U.2
Kaspar, H.3
-
57
-
-
54049099392
-
Multiple antimicrobial resistance in plague: An emerging public health risk
-
Welch TJ, Fricke WF, McDermott PF, White DG, Rosso ML, Rasko DA, Mammel MK, Eppinger M, Rosovitz MJ, Wagner D, Rahalison L, Leclerc JE, Hinshaw JM, Lindler LE, Cebula TA, Carniel E, and Ravel J. Multiple antimicrobial resistance in plague: an emerging public health risk. PLoS One 2007;2:e309.
-
(2007)
PLoS One
, vol.2
-
-
Welch, T.J.1
Fricke, W.F.2
McDermott, P.F.3
White, D.G.4
Rosso, M.L.5
Rasko, D.A.6
Mammel, M.K.7
Eppinger, M.8
Rosovitz, M.J.9
Wagner, D.10
Rahalison, L.11
Leclerc, J.E.12
Hinshaw, J.M.13
Lindler, L.E.14
Cebula, T.A.15
Carniel, E.16
Ravel, J.17
-
58
-
-
0003610576
-
-
Cary NC: SAS Institute Inc.
-
Westfall PH, Tobias RD, Rom D, Wolfinger RD, and Hochberg Y. Multiple Comparisons and Multiple Tests Using the SAS System. Cary, NC: SAS Institute, Inc., 1999.
-
(1999)
Multiple Comparisons and Multiple Tests Using the SAS System
-
-
Westfall, P.H.1
Tobias, R.D.2
Rom, D.3
Wolfinger, R.D.4
Hochberg, Y.5
-
59
-
-
70349315444
-
Complete nucleotide sequences of plasmids pEK204 pEK499 and pEK516 encoding CTX-M enzymes in three major escherichia coli lineages from the united kingdom all belonging to the international O25:H4-ST131 clone
-
Woodford N, Carattoli A, Karisik E, Underwood A, Ellington MJ, and Livermore DM. Complete nucleotide sequences of plasmids pEK204, pEK499, and pEK516, encoding CTX-M enzymes in three major Escherichia coli lineages from the United Kingdom, all belonging to the international O25:H4- ST131 clone. Antimicrob Agents Chemother 2009;53:4472-4482.
-
(2009)
Antimicrob Agents Chemother
, vol.53
, pp. 4472-4482
-
-
Woodford, N.1
Carattoli, A.2
Karisik, E.3
Underwood, A.4
Ellington, M.J.5
Livermore, D.M.6
-
60
-
-
3843117779
-
Characterization of multiple-antimicrobial-resistant Escherichia coli isolates from diseased chickens and swine in China
-
DOI 10.1128/JCM.42.8.3483-3489.2004
-
Yang H, Chen S, White DG, Zhao S, McDermott PF, Meng J, Ayers S, English L, and White DG. Characterization of multiple- antimicrobial-resistant Escherichia coli isolates from diseased chickens and swine in China. J Clin Microbiol 2004;42: 3483-3489. (Pubitemid 39045670)
-
(2004)
Journal of Clinical Microbiology
, vol.42
, Issue.8
, pp. 3483-3489
-
-
Yang, H.1
Chen, S.2
White, D.G.3
Zhao, S.4
McDermott, P.5
Walker, R.6
Meng, J.7
-
61
-
-
18044374252
-
Antimicrobial susceptibility and molecular characterization of avian pathogenic Escherichia coli isolates
-
DOI 10.1016/j.vetmic.2005.01.021
-
Zhao S, Maurer JJ, Hubert S, De Villena JF, McDermott PF, Meng J, Ayers S, English L, and White DG. Antimicrobial susceptibility and molecular characterization of avian pathogenic Escherichia coli isolates. Vet Microbiol 2005;107:215-224. (Pubitemid 40603541)
-
(2005)
Veterinary Microbiology
, vol.107
, Issue.3-4
, pp. 215-224
-
-
Zhao, S.1
Maurer, J.J.2
Hubert, S.3
De Villena, J.F.4
McDermott, P.F.5
Meng, J.6
Ayers, S.7
English, L.8
White, D.G.9
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