-
1
-
-
84893965118
-
Immune modulation in cancer with antibodies
-
Page, D. B., Postow, M. A., Callahan, M. K., Allison, J. P. & Wolchok, J. D. Immune modulation in cancer with antibodies. Ann. Rev. Med. 65, 185-202 (2014).
-
(2014)
Ann. Rev. Med.
, vol.65
, pp. 185-202
-
-
Page, D.B.1
Postow, M.A.2
Callahan, M.K.3
Allison, J.P.4
Wolchok, J.D.5
-
2
-
-
84931083080
-
Nivolumab versus chemotherapy in patients with advanced melanoma who progressed after anti-CTLA-4 treatment (CheckMate 037): A randomised, controlled, open-label, phase 3 trial
-
Weber, J. S. et al. Nivolumab versus chemotherapy in patients with advanced melanoma who progressed after anti-CTLA-4 treatment (CheckMate 037): a randomised, controlled, open-label, phase 3 trial. Lancet Oncol. 16, 375-384 (2015).
-
(2015)
Lancet Oncol.
, vol.16
, pp. 375-384
-
-
Weber, J.S.1
-
3
-
-
28844471692
-
Tumoral and immunologic response after vaccination of melanoma patients with an ALVAC virus encoding MAGE antigens recognized by T cells
-
van Baren, N. et al. Tumoral and immunologic response after vaccination of melanoma patients with an ALVAC virus encoding MAGE antigens recognized by T cells. J. Clin. Oncol.: Off. J. Am. Soc. Clin. Oncol. 23, 9008-9021 (2005).
-
(2005)
J. Clin. Oncol.: Off. J. Am. Soc. Clin. Oncol.
, vol.23
, pp. 9008-9021
-
-
Van Baren, N.1
-
4
-
-
79957831345
-
Gp100 peptide vaccine and interleukin-2 in patients with advanced melanoma
-
Schwartzentruber, D. J. et al. gp100 peptide vaccine and interleukin-2 in patients with advanced melanoma. N. Engl. J. Med. 364, 2119-2127 (2011).
-
(2011)
N. Engl. J. Med.
, vol.364
, pp. 2119-2127
-
-
Schwartzentruber, D.J.1
-
5
-
-
79952304769
-
Tumor regression in patients with metastatic synovial cell sarcoma and melanoma using genetically engineered lymphocytes reactive with NY-ESO-1
-
Robbins, P. F. et al. Tumor regression in patients with metastatic synovial cell sarcoma and melanoma using genetically engineered lymphocytes reactive with NY-ESO-1. J. Clin. Oncol.: Off. J. Am. Soc. Clin. Oncol. 29, 917-924 (2011).
-
(2011)
J. Clin. Oncol.: Off. J. Am. Soc. Clin. Oncol.
, vol.29
, pp. 917-924
-
-
Robbins, P.F.1
-
6
-
-
33749624177
-
Cancer regression in patients after transfer of genetically engineered lymphocytes
-
Morgan, R. A. et al. Cancer regression in patients after transfer of genetically engineered lymphocytes. Science 314, 126-129 (2006).
-
(2006)
Science
, vol.314
, pp. 126-129
-
-
Morgan, R.A.1
-
7
-
-
33750324618
-
Gene transfer of tumor-reactive TCR confers both high avidity and tumor reactivity to nonreactive peripheral blood mononuclear cells and tumor-infiltrating lymphocytes
-
Johnson, L. A. et al. Gene transfer of tumor-reactive TCR confers both high avidity and tumor reactivity to nonreactive peripheral blood mononuclear cells and tumor-infiltrating lymphocytes. J. Immunol. 177, 6548-6559 (2006).
-
(2006)
J. Immunol.
, vol.177
, pp. 6548-6559
-
-
Johnson, L.A.1
-
8
-
-
84880730689
-
Cardiovascular toxicity and titin cross-reactivity of affinityenhanced T cells in myeloma and melanoma
-
Linette, G. P. et al. Cardiovascular toxicity and titin cross-reactivity of affinityenhanced T cells in myeloma and melanoma. Blood 122, 863-871 (2013).
-
(2013)
Blood
, vol.122
, pp. 863-871
-
-
Linette, G.P.1
-
9
-
-
77954801079
-
Improved survival with ipilimumab in patients with metastatic melanoma
-
Hodi, F. S. et al. Improved survival with ipilimumab in patients with metastatic melanoma. N. Engl. J. Med. 363, 711-723 (2010).
-
(2010)
N. Engl. J. Med.
, vol.363
, pp. 711-723
-
-
Hodi, F.S.1
-
10
-
-
84936147067
-
Combined nivolumab and ipilimumab or monotherapy in untreated melanoma
-
Larkin, J. et al. Combined Nivolumab and Ipilimumab or Monotherapy in Untreated Melanoma. N. Engl. J. Med. 373, 23-34 (2015).
-
(2015)
N. Engl. J. Med.
, vol.373
, pp. 23-34
-
-
Larkin, J.1
-
11
-
-
84929481481
-
Pembrolizumab versus ipilimumab in advanced melanoma
-
Robert, C. et al. Pembrolizumab versus Ipilimumab in Advanced Melanoma. N. Engl. J. Med. 372, 2521-2532 (2015).
-
(2015)
N. Engl. J. Med.
, vol.372
, pp. 2521-2532
-
-
Robert, C.1
-
12
-
-
84928761118
-
Cancer immunology. Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer
-
Rizvi, N. A. et al. Cancer immunology. Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer. Science 348, 124-128 (2015).
-
(2015)
Science
, vol.348
, pp. 124-128
-
-
Rizvi, N.A.1
-
13
-
-
84918828514
-
Genetic basis for clinical response to CTLA-4 blockade in melanoma
-
Snyder, A. et al. Genetic basis for clinical response to CTLA-4 blockade in melanoma. N. Engl. J. Med. 371, 2189-2199 (2014).
-
(2014)
N. Engl. J. Med.
, vol.371
, pp. 2189-2199
-
-
Snyder, A.1
-
14
-
-
84943516465
-
Genomic correlates of response to CTLA-4 blockade in metastatic melanoma
-
Van Allen, E. M. et al. Genomic correlates of response to CTLA-4 blockade in metastatic melanoma. Science 350, 207-211 (2015).
-
(2015)
Science
, vol.350
, pp. 207-211
-
-
Van Allen, E.M.1
-
15
-
-
84882837534
-
Signatures of mutational processes in human cancer
-
Alexandrov, L. B. et al. Signatures of mutational processes in human cancer. Nature 500, 415-421 (2013).
-
(2013)
Nature
, vol.500
, pp. 415-421
-
-
Alexandrov, L.B.1
-
16
-
-
84961323160
-
High-throughput epitope discovery reveals frequent recognition of neo-antigens by CD4+ T cells in human melanoma
-
Linnemann, C. et al. High-throughput epitope discovery reveals frequent recognition of neo-antigens by CD4+ T cells in human melanoma. Nat. Med. 21, 81-85 (2015).
-
(2015)
Nat. Med.
, vol.21
, pp. 81-85
-
-
Linnemann, C.1
-
17
-
-
84872841412
-
Tumor exome analysis reveals neoantigen-specific T-Cell reactivity in an ipilimumab-responsive melanoma
-
van Rooij, N. et al. Tumor exome analysis reveals neoantigen-specific T-Cell reactivity in an ipilimumab-responsive melanoma. J. Clin. Oncol.: Off. J. Am. Soc. Clin. Oncol. 31, e439-e442 (2013).
-
(2013)
J. Clin. Oncol.: Off. J. Am. Soc. Clin. Oncol.
, vol.31
, pp. e439-e442
-
-
Van Rooij, N.1
-
18
-
-
84928811341
-
Mutant MHC class II epitopes drive therapeutic immune responses to cancer
-
Kreiter, S. et al. Mutant MHC class II epitopes drive therapeutic immune responses to cancer. Nature 520, 692-696 (2015).
-
(2015)
Nature
, vol.520
, pp. 692-696
-
-
Kreiter, S.1
-
19
-
-
84949730499
-
Immunogenicity of somatic mutations in human gastrointestinal cancers
-
Tran, E. et al. Immunogenicity of somatic mutations in human gastrointestinal cancers. Science 350, 1387-1390 (2015).
-
(2015)
Science
, vol.350
, pp. 1387-1390
-
-
Tran, E.1
-
20
-
-
27644534576
-
The response of autologous T cells to a human melanoma is dominated by mutated neoantigens
-
Lennerz, V. et al. The response of autologous T cells to a human melanoma is dominated by mutated neoantigens. Proc. Natl Acad. Sci. USA 102, 16013-16018 (2005).
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 16013-16018
-
-
Lennerz, V.1
-
21
-
-
84920956731
-
Predicting immunogenic tumour mutations by combining mass spectrometry and exome sequencing
-
Yadav, M. et al. Predicting immunogenic tumour mutations by combining mass spectrometry and exome sequencing. Nature 515, 572-576 (2014).
-
(2014)
Nature
, vol.515
, pp. 572-576
-
-
Yadav, M.1
-
22
-
-
84920921528
-
Checkpoint blockade cancer immunotherapy targets tumour-specific mutant antigens
-
Gubin, M. M. et al. Checkpoint blockade cancer immunotherapy targets tumour-specific mutant antigens. Nature 515, 577-581 (2014).
-
(2014)
Nature
, vol.515
, pp. 577-581
-
-
Gubin, M.M.1
-
23
-
-
84958064376
-
Use of HLA peptidomics and whole exome sequencing to identify human immunogenic neo-antigens
-
Kalaora, S. et al. Use of HLA peptidomics and whole exome sequencing to identify human immunogenic neo-antigens. Oncotarget 7, 5110-5117 (2016).
-
(2016)
Oncotarget
, vol.7
, pp. 5110-5117
-
-
Kalaora, S.1
-
24
-
-
84962301577
-
Clonal neoantigens elicit T cell immunoreactivity and sensitivity to immune checkpoint blockade
-
McGranahan, N. et al. Clonal neoantigens elicit T cell immunoreactivity and sensitivity to immune checkpoint blockade. Science 351, 1463-1469 (2016).
-
(2016)
Science
, vol.351
, pp. 1463-1469
-
-
McGranahan, N.1
-
25
-
-
84924326106
-
Mass spectrometry of human leukocyte antigen class I peptidomes reveals strong effects of protein abundance and turnover on antigen presentation
-
Bassani-Sternberg, M., Pletscher-Frankild, S., Jensen, L. J. & Mann, M. Mass spectrometry of human leukocyte antigen class I peptidomes reveals strong effects of protein abundance and turnover on antigen presentation. Mol. Cell. Proteom.: MCP 14, 658-673 (2015).
-
(2015)
Mol. Cell. Proteom.: MCP
, vol.14
, pp. 658-673
-
-
Bassani-Sternberg, M.1
Pletscher-Frankild, S.2
Jensen, L.J.3
Mann, M.4
-
26
-
-
57449099865
-
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
-
Cox, J. & Mann, M. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat. Biotechnol. 26, 1367-1372 (2008).
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
27
-
-
84871811905
-
Simultaneous alignment and clustering of peptide data using a Gibbs sampling approach
-
Andreatta, M., Lund, O. & Nielsen, M. Simultaneous alignment and clustering of peptide data using a Gibbs sampling approach. Bioinformatics 29, 8-14 (2013).
-
(2013)
Bioinformatics
, vol.29
, pp. 8-14
-
-
Andreatta, M.1
Lund, O.2
Nielsen, M.3
-
28
-
-
84948702563
-
Analysis of Major Histocompatibility Complex (MHC) Immunopeptidomes Using Mass Spectrometry
-
Caron, E. et al. Analysis of Major Histocompatibility Complex (MHC) Immunopeptidomes Using Mass Spectrometry. Mol. Cell. Proteom.: MCP 14, 3105-3117 (2015).
-
(2015)
Mol. Cell. Proteom.: MCP
, vol.14
, pp. 3105-3117
-
-
Caron, E.1
-
29
-
-
59449094834
-
NetMHCpan, a method for MHC class I binding prediction beyond humans
-
Hoof, I. et al. NetMHCpan, a method for MHC class I binding prediction beyond humans. Immunogenetics 61, 1-13 (2009).
-
(2009)
Immunogenetics
, vol.61
, pp. 1-13
-
-
Hoof, I.1
-
30
-
-
84941120469
-
PhosphoSitePlus, 2014: Mutations, PTMs and recalibrations
-
Hornbeck, P. V. et al. PhosphoSitePlus, 2014: mutations, PTMs and recalibrations. Nucleic Acids Res. 43, D512-D520 (2015).
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D512-D520
-
-
Hornbeck, P.V.1
-
31
-
-
54549089744
-
Phosphorylation-dependent interaction between antigenic peptides and MHC class I: A molecular basis for the presentation of transformed self
-
Mohammed, F. et al. Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self. Nat. Immunol. 9, 1236-1243 (2008).
-
(2008)
Nat. Immunol.
, vol.9
, pp. 1236-1243
-
-
Mohammed, F.1
-
32
-
-
84884683734
-
MHC class I-associated phosphopeptides are the targets of memory-like immunity in leukemia
-
Cobbold, M. et al. MHC class I-associated phosphopeptides are the targets of memory-like immunity in leukemia. Sci. Transl. Med. 5, 203ra125 (2013).
-
(2013)
Sci. Transl. Med.
, vol.5
, pp. 203ra125
-
-
Cobbold, M.1
-
33
-
-
84894283785
-
Aaa comprehensive analysis of constitutive naturally processed and presented HLA-C∗04:01 (Cw4)-specific peptides
-
Schittenhelm, R. B., Dudek, N. L., Croft, N. P., Ramarathinam, S. H. & Purcell, A. W. A comprehensive analysis of constitutive naturally processed and presented HLA-C∗04:01 (Cw4)-specific peptides. Tissue Antigens 83, 174-179 (2014).
-
(2014)
Tissue Antigens
, vol.83
, pp. 174-179
-
-
Schittenhelm, R.B.1
Dudek, N.L.2
Croft, N.P.3
Ramarathinam, S.H.4
Purcell, A.W.5
-
34
-
-
84958568837
-
The length distribution of class I-restricted T cell epitopes is determined by both peptide supply and MHC allele-specific binding preference
-
Trolle, T. et al. The length distribution of class I-restricted T cell epitopes is determined by both peptide supply and mhc allele-specific binding preference. J. Immunol. 196, 1480-1487 (2016).
-
(2016)
J. Immunol.
, vol.196
, pp. 1480-1487
-
-
Trolle, T.1
-
35
-
-
84961942662
-
Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove
-
McMurtrey, C. et al. Toxoplasma gondii peptide ligands open the gate of the HLA class I binding groove. Elife 5, e12556 (2016).
-
(2016)
Elife
, vol.5
-
-
McMurtrey, C.1
-
36
-
-
84963517897
-
The source of MHC class I presented peptides and its implications
-
Apcher, S., Prado Martins, R. & Fahraeus, R. The source of MHC class I presented peptides and its implications. Curr. Opin. Immunol. 40, 117-122 (2016).
-
(2016)
Curr. Opin. Immunol.
, vol.40
, pp. 117-122
-
-
Apcher, S.1
Prado Martins, R.2
Fahraeus, R.3
-
37
-
-
0033203120
-
Selective transport of internalized antigens to the cytosol for MHC class I presentation in dendritic cells
-
Rodriguez, A., Regnault, A., Kleijmeer, M., Ricciardi-Castagnoli, P. & Amigorena, S. Selective transport of internalized antigens to the cytosol for MHC class I presentation in dendritic cells. Nat. Cell Biol. 1, 362-368 (1999).
-
(1999)
Nat. Cell Biol.
, vol.1
, pp. 362-368
-
-
Rodriguez, A.1
Regnault, A.2
Kleijmeer, M.3
Ricciardi-Castagnoli, P.4
Amigorena, S.5
-
38
-
-
84940552740
-
Complementary IMAC enrichment methods for HLAassociated phosphopeptide identification by mass spectrometry
-
Abelin, J. G. et al. Complementary IMAC enrichment methods for HLAassociated phosphopeptide identification by mass spectrometry. Nat. Protoc. 10, 1308-1318 (2015).
-
(2015)
Nat. Protoc.
, vol.10
, pp. 1308-1318
-
-
Abelin, J.G.1
-
39
-
-
84922537688
-
Ultradeep human phosphoproteome reveals a distinct regulatory nature of Tyr and Ser/Thr-based signaling
-
Sharma, K. et al. Ultradeep human phosphoproteome reveals a distinct regulatory nature of Tyr and Ser/Thr-based signaling. Cell Rep. 8, 1583-1594 (2014).
-
(2014)
Cell Rep.
, vol.8
, pp. 1583-1594
-
-
Sharma, K.1
-
40
-
-
0036535975
-
Pinning down proline-directed phosphorylation signaling
-
Lu, K. P., Liou, Y. C. & Zhou, X. Z. Pinning down proline-directed phosphorylation signaling. Trends Cell Biol. 12, 164-172 (2002).
-
(2002)
Trends Cell Biol.
, vol.12
, pp. 164-172
-
-
Lu, K.P.1
Liou, Y.C.2
Zhou, X.Z.3
-
41
-
-
84917708479
-
MHC-restricted phosphopeptides from insulin receptor substrate-2 and CDC25b offer broad-based immunotherapeutic agents for cancer
-
Zarling, A. L. et al. MHC-restricted phosphopeptides from insulin receptor substrate-2 and CDC25b offer broad-based immunotherapeutic agents for cancer. Cancer Res. 74, 6784-6795 (2014).
-
(2014)
Cancer Res.
, vol.74
, pp. 6784-6795
-
-
Zarling, A.L.1
-
42
-
-
84976406873
-
Neoantigen landscape dynamics during human melanoma-T cell interactions
-
Verdegaal, E. M. et al. Neoantigen landscape dynamics during human melanoma-T cell interactions. Nature 536, 91-95 (2016).
-
(2016)
Nature
, vol.536
, pp. 91-95
-
-
Verdegaal, E.M.1
-
43
-
-
84969764539
-
Targeting of cancer neoantigens with donor-derived T cell receptor repertoires
-
Stronen, E. et al. Targeting of cancer neoantigens with donor-derived T cell receptor repertoires. Science 352, 1337-1341 (2016).
-
(2016)
Science
, vol.352
, pp. 1337-1341
-
-
Stronen, E.1
-
44
-
-
84959152038
-
Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patients
-
Gros, A. et al. Prospective identification of neoantigen-specific lymphocytes in the peripheral blood of melanoma patients. Nat. Med. 22, 433-438 (2016).
-
(2016)
Nat. Med.
, vol.22
, pp. 433-438
-
-
Gros, A.1
-
45
-
-
0033587768
-
Cytotoxic T lymphocyte antigen-4 (CTLA-4) regulates primary and secondary peptide-specific CD4(+) T cell responses
-
Chambers, C. A., Kuhns, M. S. & Allison, J. P. Cytotoxic T lymphocyte antigen-4 (CTLA-4) regulates primary and secondary peptide-specific CD4(+) T cell responses. Proc. Natl Acad. Sci. USA 96, 8603-8608 (1999).
-
(1999)
Proc. Natl Acad. Sci. USA
, vol.96
, pp. 8603-8608
-
-
Chambers, C.A.1
Kuhns, M.S.2
Allison, J.P.3
-
46
-
-
84943329717
-
Isolation of neoantigen-specific T cells from tumour and peripheral lymphocytes
-
Cohen, C. J. et al. Isolation of neoantigen-specific T cells from tumour and peripheral lymphocytes. J. Clin. Investig. 125, 3981-3991 (2015).
-
(2015)
J. Clin. Investig.
, vol.125
, pp. 3981-3991
-
-
Cohen, C.J.1
-
47
-
-
84903846565
-
Efficient identification of mutated cancer antigens recognized by T cells associated with durable tumour regressions
-
Lu, Y. C. et al. Efficient identification of mutated cancer antigens recognized by T cells associated with durable tumour regressions. Clin. Cancer Res.: Off. J. Am. Assoc. Cancer Res. 20, 3401-3410 (2014).
-
(2014)
Clin. Cancer Res.: Off. J. Am. Assoc. Cancer Res.
, vol.20
, pp. 3401-3410
-
-
Lu, Y.C.1
-
48
-
-
62849092944
-
Visualizing CTL activity for different CD8+ effector T cells supports the idea that lower TCR/epitope avidity may be advantageous for target cell killing
-
Jenkins, M. R. et al. Visualizing CTL activity for different CD8+ effector T cells supports the idea that lower TCR/epitope avidity may be advantageous for target cell killing. Cell Death Differ. 16, 537-542 (2009).
-
(2009)
Cell Death Differ.
, vol.16
, pp. 537-542
-
-
Jenkins, M.R.1
-
49
-
-
84925286779
-
Therapeutic targeting of naturally presented myeloperoxidasederived HLA peptide ligands on myeloid leukemia cells by TCR-transgenic T cells
-
Klar, R. et al. Therapeutic targeting of naturally presented myeloperoxidasederived HLA peptide ligands on myeloid leukemia cells by TCR-transgenic T cells. Leukemia 28, 2355-2366 (2014).
-
(2014)
Leukemia
, vol.28
, pp. 2355-2366
-
-
Klar, R.1
-
50
-
-
79953701087
-
Andromeda: A peptide search engine integrated into the MaxQuant environment
-
Cox, J. et al. Andromeda: a peptide search engine integrated into the MaxQuant environment. J. Proteome Res. 10, 1794-1805 (2011).
-
(2011)
J. Proteome Res.
, vol.10
, pp. 1794-1805
-
-
Cox, J.1
-
51
-
-
84874025843
-
Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
-
Cibulskis, K. et al. Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat. Biotechnol. 31, 213-219 (2013).
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 213-219
-
-
Cibulskis, K.1
-
52
-
-
79952422304
-
Quality control and preprocessing of metagenomic datasets
-
Schmieder, R. & Edwards, R. Quality control and preprocessing of metagenomic datasets. Bioinformatics 27, 863-864 (2011).
-
(2011)
Bioinformatics
, vol.27
, pp. 863-864
-
-
Schmieder, R.1
Edwards, R.2
-
53
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li, H. & Durbin, R. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25, 1754-1760 (2009).
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
54
-
-
77956295988
-
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
-
McKenna, A. et al. The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res. 20, 1297-1303 (2010).
-
(2010)
Genome Res.
, vol.20
, pp. 1297-1303
-
-
McKenna, A.1
-
55
-
-
84862506964
-
Aaa program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; Iso-2; iso-3
-
Cingolani, P. et al. A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3. Fly (Austin) 6, 80-92 (2012).
-
(2012)
Fly (Austin)
, vol.6
, pp. 80-92
-
-
Cingolani, P.1
-
56
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method
-
Livak, K. J. & Schmittgen, T. D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method. Methods 25, 402-408 (2001).
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
57
-
-
84872769379
-
Derivation of HLA types from shotgun sequence datasets
-
Warren, R. L. et al. Derivation of HLA types from shotgun sequence datasets. Genome Med. 4, 95 (2012).
-
(2012)
Genome Med.
, vol.4
, pp. 95
-
-
Warren, R.L.1
-
58
-
-
84959881509
-
Gapped sequence alignment using artificial neural networks: Application to the MHC class I system
-
Andreatta, M. & Nielsen, M. Gapped sequence alignment using artificial neural networks: application to the MHC class I system. Bioinformatics 32, 511-517 (2015).
-
(2015)
Bioinformatics
, vol.32
, pp. 511-517
-
-
Andreatta, M.1
Nielsen, M.2
-
59
-
-
84857362309
-
NetMHCcons: A consensus method for the major histocompatibility complex class I predictions
-
Karosiene, E., Lundegaard, C., Lund, O. & Nielsen, M. NetMHCcons: a consensus method for the major histocompatibility complex class I predictions. Immunogenetics 64, 177-186 (2012).
-
(2012)
Immunogenetics
, vol.64
, pp. 177-186
-
-
Karosiene, E.1
Lundegaard, C.2
Lund, O.3
Nielsen, M.4
-
60
-
-
84866858992
-
Isolation of human MHC class II-restricted T cell receptors from the autologous T-cell repertoire with potent anti-leukaemic reactivity
-
Weigand, L. U. et al. Isolation of human MHC class II-restricted T cell receptors from the autologous T-cell repertoire with potent anti-leukaemic reactivity. Immunology 137, 226-238 (2012).
-
(2012)
Immunology
, vol.137
, pp. 226-238
-
-
Weigand, L.U.1
-
61
-
-
80052145682
-
AcDCs enhance human antigen-specific T-cell responses
-
Martinuzzi, E. et al. acDCs enhance human antigen-specific T-cell responses. Blood 118, 2128-2137 (2011).
-
(2011)
Blood
, vol.118
, pp. 2128-2137
-
-
Martinuzzi, E.1
-
62
-
-
0036284986
-
Reversible MHC multimer staining for functional isolation of T-cell populations and effective adoptive transfer
-
Knabel, M. et al. Reversible MHC multimer staining for functional isolation of T-cell populations and effective adoptive transfer. Nat. Med. 8, 631-637 (2002).
-
(2002)
Nat. Med.
, vol.8
, pp. 631-637
-
-
Knabel, M.1
-
63
-
-
61749095015
-
Molecular cloning and characterization of MHC class I-and II-restricted tumor antigens recognized by T cells
-
Wang, R. F. Molecular cloning and characterization of MHC class I-and II-restricted tumor antigens recognized by T cells. Curr. Protoc 84, 20.10.1-20.10.29 (2009).
-
(2009)
Curr. Protoc
, vol.84
, pp. 20101-201029
-
-
Wang, R.F.1
-
64
-
-
84891796097
-
ProteomeXchange provides globally coordinated proteomics data submission and dissemination
-
Vizcaino, J. A. et al. ProteomeXchange provides globally coordinated proteomics data submission and dissemination. Nat. Biotechnol. 32, 223-226 (2014).
-
(2014)
Nat. Biotechnol.
, vol.32
, pp. 223-226
-
-
Vizcaino, J.A.1
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