Furfural tolerance and detoxification mechanism in Candida tropicalis

Biotechnology for Biofuels

Volumn 9, Issue 1, 2016, Pages

  Wang, Shizeng ^a   Cheng, Gang ^a   Joshua, Chijioke ^b   He, Zijun ^a   Sun, Xinxiao ^a   Li, Ruimin ^a   Liu, Lexuan ^a   Yuan, Qipeng ^a  

^a BEIJING UNIVERSITY OF CHEMICAL TECHNOLOGY   (China)

^b JOINT BIOENERGY INSTITUTE   (United States)

Author keywords

Alcohol dehydrogenase 1; Candida tropicalis; Furfural detoxification; Furfural tolerance

Indexed keywords

BACTERIA; BIOFUELS; BIOMASS; CANDIDA; CELLULOSE; DETOXIFICATION; DNA; ESCHERICHIA COLI; ETHANOL; FERMENTATION; FURFURAL; IONIC LIQUIDS; LIGNIN; METABOLIC ENGINEERING; METABOLISM; MICROORGANISMS; POLYMERASE CHAIN REACTION; YEAST;

ALCOHOL DEHYDROGENASE; CANDIDA TROPICALIS; DETOXIFICATION MECHANISM; HEMICELLULOSE HYDROLYSATES; HETEROLOGOUS EXPRESSION; HIGH TEMPERATURE STEAMING; HYDROTHERMAL TREATMENTS; INHIBITORY CONCENTRATION;

ALDEHYDES;

BIOFUEL; BIOMASS; CELLULOSE; DETOXIFICATION; FERMENTATION; GROWTH RATE; INHIBITION; LIGNIN; ORGANIC COMPOUND; YEAST;

CANDIDA TROPICALIS; ESCHERICHIA COLI;

EID: 84995739648     PISSN: 17546834     EISSN: None     Source Type: Journal    
DOI: 10.1186/s13068-016-0668-x     Document Type: Article

References (47)

1. Mosier N, Wyman C, Dale B, Elander R, Lee Y, Holtzapple M, et al. Features of promising technologies for pretreatment of lignocellulosic biomass. Bioresour Technol. 2005;96(6):673-86.
2. 2-catalyzed hydrolysis of corncob for xylose and xylitol production. J Chem Technol Biotechnol. 2014;89(11):1720-6.
3. Zhang HJ, Fan XG, Qiu XL, Zhang QX, Wang WY, Li SX, et al. A novel cleaning process for industrial production of xylose in pilot scale from corncob by using screw-steam-explosive extruder. Bioprocess Biosyst Eng. 2014;37(12):2425-36.
4. Fan X, Cheng G, Zhang H, Li M, Wang S, Yuan Q. Effects of acid impregnated steam explosion process on xylose recovery and enzymatic conversion of cellulose in corncob. Carbohydr Polym. 2014;114:21-6.
5. Wang L, Yang M, Fan X, Zhu X, Xu T, Yuan Q. An environmentally friendly and efficient method for xylitol bioconversion with high-temperature-steaming corncob hydrolysate by adapted Candida tropicalis. Process Biochem. 2011;46(8):1619-26.
6. Rasmussen H, Sørensen HR, Meyer AS. Formation of degradation compounds from lignocellulosic biomass in the biorefinery: sugar reaction mechanisms. Carbohydr Res. 2014;385:45-57.
7. Palmqvist E, Hahn-Hägerdal B. Fermentation of lignocellulosic hydrolysates. II: inhibitors and mechanisms of inhibition. Bioresour Technol. 2000;74(1):25-33.
8. Jönsson LJ, Alriksson B, Nilvebrant N-O. Bioconversion of lignocellulose: inhibitors and detoxification. Biotechnol Biofuels. 2013;6(1):1.
9. Taherzadeh M, Gustafsson L, Niklasson C, Lidén G. Physiological effects of 5-hydroxymethylfurfural on Saccharomyces cerevisiae. Appl Microbiol Biotechnol. 2000;53(6):701-8.
10. Almarsdottir AR, Sigurbjornsdottir MA, Orlygsson J. Effect of various factors on ethanol yields from lignocellulosic biomass by Thermoanaerobacterium AK17. Biotechnol Bioeng. 2012;109(3):686-94.
11. Zaldivar J, Martinez A, Ingram LO. Effect of selected aldehydes on the growth and fermentation of ethanologenic Escherichia coli. Biotechnol Bioeng. 1999;65(1):24-33.
12. Zaldivar J, Martinez A, Ingram LO. Effect of alcohol compounds found in hemicellulose hydrolysate on the growth and fermentation of ethanologenic Escherichia coli. Biotechnol Bioeng. 2000;68(5):524-30.
13. Allen SA, Clark W, McCaffery J, Cai Z, Lanctot A, Slininger PJ, et al. Furfural induces reactive oxygen species accumulation and cellular damage in Saccharomyces cerevisiae. Biotechnol Biofuels. 2010;3(1):1.
14. Wang L, Tang P, Fan X, Yuan Q. Effect of selected aldehydes found in the corncob hemicellulose hydrolysate on the growth and xylitol fermentation of Candida tropicalis. Biotechnol Prog. 2013;29(5):1181-9.
15. Chen Y, Sheng J, Jiang T, Stevens J, Feng X, Wei N. Transcriptional profiling reveals molecular basis and novel genetic targets for improved resistance to multiple fermentation inhibitors in Saccharomyces cerevisiae. Biotechnol Biofuels. 2016;9(1):1.
16. Miller EN, Jarboe LR, Yomano L, York S, Shanmugam K, Ingram L. Silencing of NADPH-dependent oxidoreductase genes (yqhD and dkgA) in furfural-resistant ethanologenic Escherichia coli. Appl Environ Microbiol. 2009;75(13):4315-23.
17. Miller EN, Jarboe LR, Turner PC, Pharkya P, Yomano LP, York SW, et al. Furfural inhibits growth by limiting sulfur assimilation in ethanologenic Escherichia coli strain LY180. Appl Environ Microbiol. 2009;75(19):6132-41.
18. Wang X, Miller E, Yomano L, Zhang X, Shanmugam K, Ingram L. Increased furfural tolerance due to overexpression of NADH-dependent oxidoreductase FucO in Escherichia coli strains engineered for the production of ethanol and lactate. Appl Environ Microbiol. 2011;77(15):5132-40.
19. Lin FM, Qiao B, Yuan YJ. Comparative proteomic analysis of tolerance and adaptation of ethanologenic Saccharomyces cerevisiae to furfural, a lignocellulosic inhibitory compound. Appl Environ Microbiol. 2009;75(11):3765-76.
20. 2 confers furfural resistance and increases the initial fermentation rate in ethanol production. J Biosci Bioeng. 2012;113(4):451-5.
21. Kim D, Hahn JS. Roles of the Yap1 transcription factor and antioxidants in Saccharomyces cerevisiae's tolerance to furfural and 5-hydroxymethylfurfural, which function as thiol-reactive electrophiles generating oxidative stress. Appl Environ Microbiol. 2013;79(16):5069-77.
22. Gorsich S, Dien B, Nichols N, Slininger P, Liu Z, Skory C. Tolerance to furfural-induced stress is associated with pentose phosphate pathway genes ZWF1, GND1, RPE1, and TKL1 in Saccharomyces cerevisiae. Appl Microbiol Biotechnol. 2006;71(3):339-49.
23. Ran H, Zhang J, Gao Q, Lin Z, Bao J. Analysis of biodegradation performance of furfural and 5-hydroxymethylfurfural by Amorphotheca resinae ZN1. Biotechnol Biofuels. 2014;7(1):1.
24. Ishii J, Yoshimura K, Hasunuma T, Kondo A. Reduction of furan derivatives by overexpressing NADH-dependent Adh1 improves ethanol fermentation using xylose as sole carbon source with Saccharomyces cerevisiae harboring XR-XDH pathway. Appl Microbiol Biotechnol. 2013;97(6):2597-607.
25. Laadan B, Almeida JR, Rådström P, Hahn-Hägerdal B, Gorwa-Grauslund M. Identification of an NADH-dependent 5-hydroxymethylfurfural-reducing alcohol dehydrogenase in Saccharomyces cerevisiae. Yeast. 2008;25(3):191-8.
26. Hasunuma T, Ismail KSK, Nambu Y, Kondo A. Co-expression of TAL1 and ADH1 in recombinant xylose-fermenting Saccharomyces cerevisiae improves ethanol production from lignocellulosic hydrolysates in the presence of furfural. J Biosci Bioeng. 2014;117(2):165-9.
27. Guigo N, Mija A, Vincent L, Sbirrazzuoli N. Chemorheological analysis and model-free kinetics of acid catalysed furfuryl alcohol polymerization. Phys Chem Chem Phys. 2007;9(39):5359-66.
28. Bozell JJ, Moens L, Elliott D, Wang Y, Neuenscwander G, Fitzpatrick S, et al. Production of levulinic acid and use as a platform chemical for derived products. Resour Conserv Recycl. 2000;28(3):227-39.
29. Wang S, Li H, Fan X, Zhang J, Tang P, Yuan Q. Metabolic responses in Candida tropicalis to complex inhibitors during xylitol bioconversion. Fungal Genet Biol. 2015;82:1-8.
30. Wang S, He Z, Yuan Q. Xylose enhances furfural tolerance in Candida tropicalis by improving NADH recycle. Chem Eng Sci. 2017;158:37-40.
31. Ko BS, Kim J, Kim JH. Production of xylitol from D-xylose by a xylitol dehydrogenase gene-disrupted mutant of Candida tropicalis. Appl Environ Microbiol. 2006;72(6):4207-13.
32. Jeon WY, Yoon BH, Ko BS, Shim WY, Kim JH. Xylitol production is increased by expression of codon-optimized Neurospora crassa xylose reductase gene in Candida tropicalis. Bioprocess Biosyst Eng. 2012;35(1-2):191-8.
33. Mao X, Cao F, Nie X, Liu H, Chen J. The Swi/Snf chromatin remodeling complex is essential for hyphal development in Candida albicans. FEBS Lett. 2006;580(11):2615-22.
34. Haas L, Cregg J, Gleeson M. Development of an integrative DNA transformation system for the yeast Candida tropicalis. J Bacteriol. 1990;172(8):4571-7.
35. Chen Z, Li Y, Feng Y, Chen L, Yuan Q. Enzyme activity enhancement of chondroitinase ABC I from Proteus vulgaris by site-directed mutagenesis. RSC Adv. 2015;5(93):76040-7.
36. Delgenes J, Moletta R, Navarro J. Effects of lignocellulose degradation products on ethanol fermentations of glucose and xylose by Saccharomyces cerevisiae, Zymomonas mobilis, Pichia stipitis, and Candida shehatae. Enzyme Microb Technol. 1996;19(3):220-5.
37. Banerjee N, Bhatnagar R, Viswanathan L. Inhibition of glycolysis by furfural in Saccharomyces cerevisiae. Eur J Appl Microbiol Biotechnol. 1981;11(4):226-8.
38. Siqueira MR, Reginatto V. Inhibition of fermentative H 2 production by hydrolysis byproducts of lignocellulosic substrates. Renew Energy. 2015;80:109-16.
39. Bischoff KM, Liu S, Hughes SR, Rich JO. Fermentation of corn fiber hydrolysate to lactic acid by the moderate thermophile Bacillus coagulans. Biotechnol Lett. 2010;32(6):823-8.
40. De Vrije T, Bakker RR, Budde MA, Lai MH, Mars AE, Claassen PA. Efficient hydrogen production from the lignocellulosic energy crop Miscanthus by the extreme thermophilic bacteria Caldicellulosiruptor saccharolyticus and Thermotoga neapolitana. Biotechnol Biofuels. 2009;2(1):1.
41. Clarkson SM, Hamilton-Brehm SD, Giannone RJ, Engle NL, Tschaplinski TJ, Hettich RL, et al. A comparative multidimensional LC-MS proteomic analysis reveals mechanisms for furan aldehyde detoxification in Thermoanaerobacter pseudethanolicus 39E. Biotechnol Biofuels. 2014;7(1):1.
42. Rizzi M, Erlemann P, Bui-Thanh N-A, Dellweg H. Xylose fermentation by yeasts. Appl Microbiol Biotechnol. 1988;29(2-3):148-54.
43. Rizzi M, Harwart K, Erlemann P, Bui-Thanh N-A, Dellweg H. Purification and properties of the NAD+ -xylitol-dehydrogenase from the yeast Pichia stipitis. J Ferment Bioeng. 1989;67(1):20-4.
44. Seo H-M, Jeon J-M, Lee JH, Song H-S, Joo H-B, Park S-H, et al. Combinatorial application of two aldehyde oxidoreductases on isobutanol production in the presence of furfural. J Ind Microbiol Biotechnol. 2016;43(1):37-44.
45. Ask M, Bettiga M, Duraiswamy VR, Olsson L. Pulsed addition of HMF and furfural to batch-grown xylose-utilizing Saccharomyces cerevisiae results in different physiological responses in glucose and xylose consumption phase. Biotechnol Biofuels. 2013;6(1):1.
46. Palmqvist E, Almeida JS, Hahn-Hägerdal B. Influence of furfural on anaerobic glycolytic kinetics of Saccharomyces cerevisiae in batch culture. Biotechnol Bioeng. 1999;62(4):447-54.
47. Atsumi S, Hanai T, Liao JC. Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels. Nature. 2008;451(7174):86-9.