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Volumn 2016, Issue 11, 2016, Pages

Whole-brain ex-vivo quantitative MRI of the cuprizone mouse model

Author keywords

Cuprizone; Inflammation; Mouse; MRI; Myelin; Quantitative imaging

Indexed keywords

ADULT; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; BRAIN HISTOLOGY; CEREBELLUM; CONTROLLED STUDY; CORPUS CALLOSUM; CUPRIZONE-INDUCED DEMYELINATION; DIAGNOSTIC TEST ACCURACY STUDY; DIFFUSION TENSOR IMAGING; FRACTIONAL ANISOTROPY; HIPPOCAMPUS; INFLAMMATION; MALE; MICROGLIA; MORPHOMETRICS; MOUSE; MYELINATION; NONHUMAN; NUCLEAR MAGNETIC RESONANCE IMAGING; SENSITIVITY AND SPECIFICITY; THALAMUS;

EID: 84994591123     PISSN: None     EISSN: 21678359     Source Type: Journal    
DOI: 10.7717/peerj.2632     Document Type: Article
Times cited : (48)

References (65)
  • 2
    • 0142074685 scopus 로고    scopus 로고
    • How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging
    • Andersson JL, Skare S, Ashburner J. 2003. How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging. NeuroImage 20(2):870-888 DOI 10.1016/S1053-8119(03)00336-7.
    • (2003) NeuroImage , vol.20 , Issue.2 , pp. 870-888
    • Andersson, J.L.1    Skare, S.2    Ashburner, J.3
  • 3
    • 84941292221 scopus 로고    scopus 로고
    • An integrated approach to correction for off-resonance effects and subject movement in diffusion MR imaging
    • Andersson JL, Sotiropoulos SN. 2016. An integrated approach to correction for off-resonance effects and subject movement in diffusion MR imaging. NeuroImage 125:1063-1078 DOI 10.1016/j.neuroimage.2015.10.019.
    • (2016) NeuroImage , vol.125 , pp. 1063-1078
    • Andersson, J.L.1    Sotiropoulos, S.N.2
  • 4
    • 78650181934 scopus 로고    scopus 로고
    • A reproducible evaluation of ANTs similarity metric performance in brain image registration
    • Avants BB, Tustison NJ, Song G, Cook PA, Klein A, Gee JC. 2011. A reproducible evaluation of ANTs similarity metric performance in brain image registration. NeuroImage 54(3):2033-2044 DOI 10.1016/j.neuroimage.2010.09.025.
    • (2011) NeuroImage , vol.54 , Issue.3 , pp. 2033-2044
    • Avants, B.B.1    Tustison, N.J.2    Song, G.3    Cook, P.A.4    Klein, A.5    Gee, J.C.6
  • 5
    • 71949095052 scopus 로고    scopus 로고
    • The optimal template effect in hippocampus studies of diseased populations
    • Avants BB, Yushkevich P, Pluta J, MinkoffD, Korczykowski M, Detre J, Gee JC. 2010. The optimal template effect in hippocampus studies of diseased populations. NeuroImage 49(3):2457-2466 DOI 10.1016/j.neuroimage.2009.09.062.
    • (2010) NeuroImage , vol.49 , Issue.3 , pp. 2457-2466
    • Avants, B.B.1    Yushkevich, P.2    Pluta, J.3    Minkoff, D.4    Korczykowski, M.5    Detre, J.6    Gee, J.C.7
  • 7
    • 84944722482 scopus 로고    scopus 로고
    • Incorporation of nonzero echo times in the SPGR and bSSFP signal models used in mcDESPOT
    • Bouhrara M, Spencer RG. 2015. Incorporation of nonzero echo times in the SPGR and bSSFP signal models used in mcDESPOT. Magnetic Resonance in Medicine 74(5):1227-1235 DOI 10.1002/mrm.25984.
    • (2015) Magnetic Resonance in Medicine , vol.74 , Issue.5 , pp. 1227-1235
    • Bouhrara, M.1    Spencer, R.G.2
  • 9
    • 84856235235 scopus 로고    scopus 로고
    • Magnetic resonance imaging and histological evidence for the blockade of cuprizoneinduced demyelination in C57BL/6 mice
    • Chandran P, Upadhyay J, Markosyan S, Lisowski A, Buck W, Chin C-L, Fox G, Luo F, Day M. 2012. Magnetic resonance imaging and histological evidence for the blockade of cuprizoneinduced demyelination in C57BL/6 mice. Neuroscience 202:446-453 DOI 10.1016/j.neuroscience.2011.10.051.
    • (2012) Neuroscience , vol.202 , pp. 446-453
    • Chandran, P.1    Upadhyay, J.2    Markosyan, S.3    Lisowski, A.4    Buck, W.5    Chin, C.-L.6    Fox, G.7    Luo, F.8    Day, M.9
  • 10
    • 84875207604 scopus 로고    scopus 로고
    • Lithium, gray matter, and magnetic resonance imaging signal
    • Cousins DA, Aribisala B, Ferrier IN, Blamire AM. 2013. Lithium, gray matter, and magnetic resonance imaging signal. Biological Psychiatry 73(7):652-657 DOI 10.1016/j.biopsych.2012.09.029.
    • (2013) Biological Psychiatry , vol.73 , Issue.7 , pp. 652-657
    • Cousins, D.A.1    Aribisala, B.2    Ferrier, I.N.3    Blamire, A.M.4
  • 11
    • 84863004691 scopus 로고    scopus 로고
    • Afni: What a long strange trip it's been
    • Cox RW. 2012. Afni: What a long strange trip it's been. NeuroImage 62(2):743-747 DOI 10.1016/j.neuroimage.2011.08.056.
    • (2012) NeuroImage , vol.62 , Issue.2 , pp. 743-747
    • Cox, R.W.1
  • 12
    • 84919865242 scopus 로고    scopus 로고
    • Investigating the stability of mcDESPOTmyelin water fraction values derived using a stochastic region contraction approach
    • Deoni SC, Kolind SH. 2014. Investigating the stability of mcDESPOTmyelin water fraction values derived using a stochastic region contraction approach. Magnetic Resonance in Medicine 73(1):161-169 DOI 10.1002/mrm.25108.
    • (2014) Magnetic Resonance in Medicine , vol.73 , Issue.1 , pp. 161-169
    • Deoni, S.C.1    Kolind, S.H.2
  • 13
    • 68049142599 scopus 로고    scopus 로고
    • Transverse relaxation time (T2) mapping in the brain with off-resonance correction using phase-cycled steady-state free precession imaging
    • Deoni SCL. 2009. Transverse relaxation time (T2) mapping in the brain with off-resonance correction using phase-cycled steady-state free precession imaging. Journal of Magnetic Resonance Imaging 30(2):411-417 DOI 10.1002/jmri.v30:2.
    • (2009) Journal of Magnetic Resonance Imaging , vol.30 , Issue.2 , pp. 411-417
    • Deoni, S.C.L.1
  • 14
    • 84879414396 scopus 로고    scopus 로고
    • One component? Two components? Three? The effect of including a nonexchanging "free" water component in multicomponent driven equilibrium single pulse observation of T1 and T2
    • Deoni SCL, Matthews L, Kolind SH. 2013. One component? Two components? Three? The effect of including a nonexchanging "free" water component in multicomponent driven equilibrium single pulse observation of T1 and T2. Magnetic Resonance in Medicine 70(1):147-154 DOI 10.1002/mrm.v70.1.
    • (2013) Magnetic Resonance in Medicine , vol.70 , Issue.1 , pp. 147-154
    • Deoni, S.C.L.1    Matthews, L.2    Kolind, S.H.3
  • 16
    • 45849093291 scopus 로고    scopus 로고
    • High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice
    • Dorr A, Lerch J, Spring S, Kabani N, Henkelman R. 2008. High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice. NeuroImage 42(1):60-69 DOI 10.1016/j.neuroimage.2008.03.037.
    • (2008) NeuroImage , vol.42 , Issue.1 , pp. 60-69
    • Dorr, A.1    Lerch, J.2    Spring, S.3    Kabani, N.4    Henkelman, R.5
  • 17
    • 84920647269 scopus 로고    scopus 로고
    • Biotherapies in multiple sclerosis: a step toward remyelination and neuroprotection?
    • Dubessy A-L, Zujovic V, Papeix C, StankoffB. 2014. Biotherapies in multiple sclerosis: a step toward remyelination and neuroprotection? Revue Neurologique 170(12):770-778 DOI 10.1016/j.neurol.2014.10.004.
    • (2014) Revue Neurologique , vol.170 , Issue.12 , pp. 770-778
    • Dubessy, A.-L.1    Zujovic, V.2    Papeix, C.3    Stankoff, B.4
  • 19
    • 84893576920 scopus 로고    scopus 로고
    • Deep gray matter demyelination detected by magnetization transfer ratio in the cuprizone model
    • Fjær S, Bø L, Lundervold A, Myhr K-M, Pavlin T, Torkildsen Ø, Wergeland S. 2013. Deep gray matter demyelination detected by magnetization transfer ratio in the cuprizone model. PLoS ONE 8(12):e84162 DOI 10.1371/journal.pone.0084162.
    • (2013) PLoS ONE , vol.8 , Issue.12
    • Fjær, S.1    Bø, L.2    Lundervold, A.3    Myhr, K.-M.4    Pavlin, T.5    Torkildsen, Ø.6    Wergeland, S.7
  • 20
    • 84942197205 scopus 로고    scopus 로고
    • Anatomical distribution of cuprizone-induced lesions in C57BL6 mice
    • Goldberg J, Clarner T, Beyer C, Kipp M. 2015. Anatomical distribution of cuprizone-induced lesions in C57BL6 mice. Journal of Molecular Neuroscience 57(2):166-175 DOI 10.1007/s12031-015-0595-5.
    • (2015) Journal of Molecular Neuroscience , vol.57 , Issue.2 , pp. 166-175
    • Goldberg, J.1    Clarner, T.2    Beyer, C.3    Kipp, M.4
  • 21
    • 69549105728 scopus 로고    scopus 로고
    • Cuprizone treatment induces distinct demyelination, astrocytosis, and microglia cell invasion or proliferation in the mouse cerebellum
    • Groebe A, Clarner T, Baumgartner W, Dang J, Beyer C, Kipp M. 2009. Cuprizone treatment induces distinct demyelination, astrocytosis, and microglia cell invasion or proliferation in the mouse cerebellum. Cerebellum 8(3):163-174 DOI 10.1007/s12311-009-0099-3.
    • (2009) Cerebellum , vol.8 , Issue.3 , pp. 163-174
    • Groebe, A.1    Clarner, T.2    Baumgartner, W.3    Dang, J.4    Beyer, C.5    Kipp, M.6
  • 24
    • 84968822506 scopus 로고    scopus 로고
    • Assessment of mcDESPOT precision using constrained estimation
    • Hurley SA, Alexander AL. 2014. Assessment of mcDESPOT precision using constrained estimation. In: Proceedings of the ISMRM, Vol. 22, 3144.
    • (2014) Proceedings of the ISMRM , vol.22 , pp. 3144
    • Hurley, S.A.1    Alexander, A.L.2
  • 25
    • 84875249130 scopus 로고    scopus 로고
    • The radial diffusivity and magnetization transfer pool size ratio are sensitive markers for demyelination in a rat model of type III multiple sclerosis (MS) lesions
    • Janve VA, Zu Z, Yao S-Y, Li K, Zhang FL, Wilson KJ, Ou X, Does MD, Subramaniam S, Gochberg DF. 2013. The radial diffusivity and magnetization transfer pool size ratio are sensitive markers for demyelination in a rat model of type III multiple sclerosis (MS) lesions. NeuroImage 74:298-305 DOI 10.1016/j.neuroimage.2013.02.034.
    • (2013) NeuroImage , vol.74 , pp. 298-305
    • Janve, V.A.1    Zu, Z.2    Yao, S.-Y.3    Li, K.4    Zhang, F.L.5    Wilson, K.J.6    Ou, X.7    Does, M.D.8    Subramaniam, S.9    Gochberg, D.F.10
  • 28
    • 84875234773 scopus 로고    scopus 로고
    • White matter integrity, fiber count, and other fallacies: the do's and don'ts of diffusion MRI
    • Jones DK, Knösche TR, Turner R. 2013. White matter integrity, fiber count, and other fallacies: the do's and don'ts of diffusion MRI. NeuroImage 73:239-254 DOI 10.1016/j.neuroimage.2012.06.081.
    • (2013) NeuroImage , vol.73 , pp. 239-254
    • Jones, D.K.1    Knösche, T.R.2    Turner, R.3
  • 29
    • 84872872374 scopus 로고    scopus 로고
    • On the inherent precision of mcDESPOT
    • Lankford CL, Does MD. 2012. On the inherent precision of mcDESPOT. Magnetic Resonance in Medicine 69(1):127-136 DOI 10.1002/mrm.24241.
    • (2012) Magnetic Resonance in Medicine , vol.69 , Issue.1 , pp. 127-136
    • Lankford, C.L.1    Does, M.D.2
  • 31
    • 61449187249 scopus 로고    scopus 로고
    • Chronic toxic demyelination in the central nervous system leads to axonal damage despite remyelination
    • Lindner M, Fokuhl J, Linsmeier F, Trebst C, Stangel M. 2009. Chronic toxic demyelination in the central nervous system leads to axonal damage despite remyelination. Neuroscience Letters 453(2):120-125 DOI 10.1016/j.neulet.2009.02.004.
    • (2009) Neuroscience Letters , vol.453 , Issue.2 , pp. 120-125
    • Lindner, M.1    Fokuhl, J.2    Linsmeier, F.3    Trebst, C.4    Stangel, M.5
  • 34
    • 84925267195 scopus 로고    scopus 로고
    • Myelination of the nervous system: mechanisms and functions
    • Nave K-A, Werner HB. 2014. Myelination of the nervous system: mechanisms and functions. Annual Review of Cell and Developmental Biology 30(1):503-533 DOI 10.1146/annurev-cellbio-100913-013101.
    • (2014) Annual Review of Cell and Developmental Biology , vol.30 , Issue.1 , pp. 503-533
    • Nave, K.-A.1    Werner, H.B.2
  • 35
    • 84922480716 scopus 로고    scopus 로고
    • Effect of high-dose 1.25 dihydroxyvitamin d3 on remyelination in the cuprizone model
    • Nystad AE, Wergeland S, Aksnes L, Myhr K-M, Bø L, Torkildsen Ø. 2014. Effect of high-dose 1.25 dihydroxyvitamin d3 on remyelination in the cuprizone model. APMIS 122(12):1178-1186 DOI 10.1111/apm.12281.
    • (2014) APMIS , vol.122 , Issue.12 , pp. 1178-1186
    • Nystad, A.E.1    Wergeland, S.2    Aksnes, L.3    Myhr, K.-M.4    Bø, L.5    Torkildsen, Ø.6
  • 38
    • 84892840427 scopus 로고    scopus 로고
    • Why diffusion tensor MRI does well only some of the time: variance and covariance of white matter tissue microstructure attributes in the living human brain
    • Santis SD, Drakesmith M, Bells S, Assaf Y, Jones DK. 2014. Why diffusion tensor MRI does well only some of the time: variance and covariance of white matter tissue microstructure attributes in the living human brain. NeuroImage 89:35-44 DOI 10.1016/j.neuroimage.2013.12.003.
    • (2014) NeuroImage , vol.89 , pp. 35-44
    • Santis, S.D.1    Drakesmith, M.2    Bells, S.3    Assaf, Y.4    Jones, D.K.5
  • 41
    • 80053995816 scopus 로고    scopus 로고
    • De-and remyelination in the CNS white and grey matter induced by cuprizone: the old, the new, and the unexpected
    • Skripuletz T, Gudi V, Hackstette D, Stangel M. 2011. De-and remyelination in the CNS white and grey matter induced by cuprizone: the old, the new, and the unexpected. Histology and Histopathology 26(12):1585-1597.
    • (2011) Histology and Histopathology , vol.26 , Issue.12 , pp. 1585-1597
    • Skripuletz, T.1    Gudi, V.2    Hackstette, D.3    Stangel, M.4
  • 42
    • 55149112384 scopus 로고    scopus 로고
    • Threshold-free cluster enhancement: addressing problems of smoothing, threshold dependence and localisation in cluster inference
    • Smith SM, Nichols TE. 2009. Threshold-free cluster enhancement: addressing problems of smoothing, threshold dependence and localisation in cluster inference. NeuroImage 44(1):83-98 DOI 10.1016/j.neuroimage.2008.03.061.
    • (2009) NeuroImage , vol.44 , Issue.1 , pp. 83-98
    • Smith, S.M.1    Nichols, T.E.2
  • 43
    • 18044380678 scopus 로고    scopus 로고
    • Demyelination increases radial diffusivity in corpus callosum of mouse brain
    • Song S-K, Yoshino J, Le TQ, Lin S-J, Sun S-W, Cross AH, Armstrong RC. 2005. Demyelination increases radial diffusivity in corpus callosum of mouse brain. NeuroImage 26(1):132-140 DOI 10.1016/j.neuroimage.2005.01.028.
    • (2005) NeuroImage , vol.26 , Issue.1 , pp. 132-140
    • Song, S.-K.1    Yoshino, J.2    Le, T.Q.3    Lin, S.-J.4    Sun, S.-W.5    Cross, A.H.6    Armstrong, R.C.7
  • 45
    • 32544450122 scopus 로고    scopus 로고
    • Noninvasive detection of cuprizone induced axonal damage and demyelination in the mouse corpus callosum
    • Sun S-W, Liang H-F, Trinkaus K, Cross AH, Armstrong RC, Song S-K. 2006. Noninvasive detection of cuprizone induced axonal damage and demyelination in the mouse corpus callosum. Magnetic Resonance in Medicine 55(2):302-308 DOI 10.1002/mrm.20774.
    • (2006) Magnetic Resonance in Medicine , vol.55 , Issue.2 , pp. 302-308
    • Sun, S.-W.1    Liang, H.-F.2    Trinkaus, K.3    Cross, A.H.4    Armstrong, R.C.5    Song, S.-K.6
  • 49
    • 57449088363 scopus 로고    scopus 로고
    • Effects of dietary intervention on MRI activity, de-and remyelination in the cuprizone model for demyelination
    • Torkildsen Ø, Brunborg LA, Thorsen F, Mørk SJ, Stangel M, Myhr K-M, Bø L. 2009. Effects of dietary intervention on MRI activity, de-and remyelination in the cuprizone model for demyelination. Experimental Neurology 215(1):160-166 DOI 10.1016/j.expneurol.2008.09.026.
    • (2009) Experimental Neurology , vol.215 , Issue.1 , pp. 160-166
    • Torkildsen, Ø.1    Brunborg, L.A.2    Thorsen, F.3    Mørk, S.J.4    Stangel, M.5    Myhr, K.-M.6    Bø, L.7
  • 53
    • 84942323286 scopus 로고    scopus 로고
    • Interpretation of magnetization transfer from inhomogeneously broadened lines (ihMT) in tissues as a dipolar order effect within motion restricted molecules in tissues as a dipolar order effect within motion restricted molecules
    • Varma G, Girard O, Prevost V, Grant A, Duhamel G, Alsop D. 2015. Interpretation of magnetization transfer from inhomogeneously broadened lines (ihMT) in tissues as a dipolar order effect within motion restricted molecules in tissues as a dipolar order effect within motion restricted molecules. Journal of Magnetic Resonance 260:67-76 DOI 10.1016/j.jmr.2015.08.024.
    • (2015) Journal of Magnetic Resonance , vol.260 , pp. 67-76
    • Varma, G.1    Girard, O.2    Prevost, V.3    Grant, A.4    Duhamel, G.5    Alsop, D.6
  • 54
    • 0026339976 scopus 로고
    • Unbiased stereological estimation of the total number of neurons in the subdivisions of the rat hippocampus using the optical fractionator
    • West MJ, Slomianka L, Gundersen HJG. 1991. Unbiased stereological estimation of the total number of neurons in the subdivisions of the rat hippocampus using the optical fractionator. Anatomical Record 231(4):482-497 DOI 10.1002/ar.1092310411.
    • (1991) Anatomical Record , vol.231 , Issue.4 , pp. 482-497
    • West, M.J.1    Slomianka, L.2    Gundersen, H.J.G.3
  • 57
    • 84932195825 scopus 로고    scopus 로고
    • Improved formulas for the two optimum VFA flip-angles
    • Wood TC. 2015. Improved formulas for the two optimum VFA flip-angles. Magnetic Resonance in Medicine 74(1):1-3 DOI 10.1002/mrm.25592.
    • (2015) Magnetic Resonance in Medicine , vol.74 , Issue.1 , pp. 1-3
    • Wood, T.C.1
  • 60
    • 33846078031 scopus 로고    scopus 로고
    • Actual flip-angle imaging in the pulsed steady state: a method for rapid three-dimensional mapping of the transmitted radiofrequency field
    • Yarnykh VL. 2007. Actual flip-angle imaging in the pulsed steady state: a method for rapid three-dimensional mapping of the transmitted radiofrequency field. Magnetic Resonance in Medicine 57(1):192-200 DOI 10.1002/mrm.21120.
    • (2007) Magnetic Resonance in Medicine , vol.57 , Issue.1 , pp. 192-200
    • Yarnykh, V.L.1
  • 61
    • 77952705528 scopus 로고    scopus 로고
    • Optimal radiofrequency and gradient spoiling for improved accuracy of T1 and B1 measurements using fast steady-state techniques
    • Yarnykh VL. 2010. Optimal radiofrequency and gradient spoiling for improved accuracy of T1 and B1 measurements using fast steady-state techniques. Magnetic Resonance in Medicine 63(6):1610-1626 DOI 10.1002/mrm.v63:6.
    • (2010) Magnetic Resonance in Medicine , vol.63 , Issue.6 , pp. 1610-1626
    • Yarnykh, V.L.1
  • 62
    • 4344697166 scopus 로고    scopus 로고
    • Cross-relaxation imaging reveals detailed anatomy of white matter fiber tracts in the human brain
    • Yarnykh VL, Yuan C. 2004. Cross-relaxation imaging reveals detailed anatomy of white matter fiber tracts in the human brain. NeuroImage 23(1):409-424 DOI 10.1016/j.neuroimage.2004.04.029.
    • (2004) NeuroImage , vol.23 , Issue.1 , pp. 409-424
    • Yarnykh, V.L.1    Yuan, C.2
  • 63
    • 84857365918 scopus 로고    scopus 로고
    • In vivo and ex vivo diffusion tensor imaging of cuprizone-induced demyelination in the mouse corpus callosum
    • Zhang J, Jones MV, McMahon MT, Mori S, Calabresi PA. 2012. In vivo and ex vivo diffusion tensor imaging of cuprizone-induced demyelination in the mouse corpus callosum. Magnetic Resonance in Medicine 67(3):750-759 DOI 10.1002/mrm.23032.
    • (2012) Magnetic Resonance in Medicine , vol.67 , Issue.3 , pp. 750-759
    • Zhang, J.1    Jones, M.V.2    McMahon, M.T.3    Mori, S.4    Calabresi, P.A.5
  • 64
    • 84919837381 scopus 로고    scopus 로고
    • Comparison of myelin water fraction from multiecho T2 decay curve and steady-state methods
    • Zhang J, Kolind SH, Laule C, MacKay AL. 2014. Comparison of myelin water fraction from multiecho T2 decay curve and steady-state methods. Magnetic Resonance in Medicine 73(1):223-232 DOI 10.1002/mrm.25125.
    • (2014) Magnetic Resonance in Medicine , vol.73 , Issue.1 , pp. 223-232
    • Zhang, J.1    Kolind, S.H.2    Laule, C.3    MacKay, A.L.4
  • 65
    • 0031345518 scopus 로고    scopus 로고
    • Algorithm 778: L-bfgs-b: Fortran subroutines for large-scale bound-constrained optimization
    • Zhu C, Byrd RH, Lu P, Nocedal J. 1997. Algorithm 778: L-bfgs-b: Fortran subroutines for large-scale bound-constrained optimization. ACM Transactions on Mathematical Software 23(4):550-560 DOI 10.1145/279232.279236.
    • (1997) ACM Transactions on Mathematical Software , vol.23 , Issue.4 , pp. 550-560
    • Zhu, C.1    Byrd, R.H.2    Lu, P.3    Nocedal, J.4


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