-
1
-
-
0034759224
-
The epidemiology of fatalities reported to the vaccine adverse event reporting system 1990–1997
-
COI: 1:STN:280:DC%2BD38%2FjsVelug%3D%3D, PID: 11760487
-
Silvers LE, Ellenberg SS, Wise RP, Varricchio FE, Mootrey GT, Salive ME. The epidemiology of fatalities reported to the vaccine adverse event reporting system 1990–1997. Pharmacoepidemiol Drug Saf. 2001;10(4):279–85.
-
(2001)
Pharmacoepidemiol Drug Saf
, vol.10
, Issue.4
, pp. 279-285
-
-
Silvers, L.E.1
Ellenberg, S.S.2
Wise, R.P.3
Varricchio, F.E.4
Mootrey, G.T.5
Salive, M.E.6
-
2
-
-
0038341614
-
Surveillance for safety after immunization: vaccine adverse event reporting system (VAERS)--United States, 1991–2001
-
PID: 12825543
-
Zhou W, Pool V, Iskander JK, English-Bullard R, Ball R, Wise RP, et al. Surveillance for safety after immunization: vaccine adverse event reporting system (VAERS)--United States, 1991–2001. MMWR Surveill Summ. 2003;52(1):1–24.
-
(2003)
MMWR Surveill Summ
, vol.52
, Issue.1
, pp. 1-24
-
-
Zhou, W.1
Pool, V.2
Iskander, J.K.3
English-Bullard, R.4
Ball, R.5
Wise, R.P.6
-
3
-
-
84870367610
-
Ontology-based combinatorial comparative analysis of adverse events associated with killed and live influenza vaccines
-
COI: 1:CAS:528:DC%2BC38XhvVGjtr%2FL, PID: 23209624
-
Sarntivijai S, Xiang Z, Shedden KA, Markel H, Omenn GS, Athey BD, et al. Ontology-based combinatorial comparative analysis of adverse events associated with killed and live influenza vaccines. PLoS One. 2012;7(11):e49941.
-
(2012)
PLoS One
, vol.7
, Issue.11
-
-
Sarntivijai, S.1
Xiang, Z.2
Shedden, K.A.3
Markel, H.4
Omenn, G.S.5
Athey, B.D.6
-
4
-
-
84877279854
-
Association between Guillain-Barre syndrome and influenza A (H1N1) 2009 monovalent inactivated vaccines in the USA: a meta-analysis
-
PID: 23498095
-
Salmon DA, Proschan M, Forshee R, Gargiullo P, Bleser W, Burwen DR, et al. Association between Guillain-Barre syndrome and influenza A (H1N1) 2009 monovalent inactivated vaccines in the USA: a meta-analysis. Lancet. 2013;381(9876):1461–8.
-
(2013)
Lancet
, vol.381
, Issue.9876
, pp. 1461-1468
-
-
Salmon, D.A.1
Proschan, M.2
Forshee, R.3
Gargiullo, P.4
Bleser, W.5
Burwen, D.R.6
-
6
-
-
84894617199
-
Consequences, measurement, and evaluation of the costs associated with adverse drug reactions among hospitalized patients in China
-
PID: 24533894
-
Qing-ping S, Xiao-dong J, Feng D, Yan L, Mei-ling Y, Jin-xiu Z, et al. Consequences, measurement, and evaluation of the costs associated with adverse drug reactions among hospitalized patients in China. BMC Health Serv Res. 2014;14:73.
-
(2014)
BMC Health Serv Res
, vol.14
, pp. 73
-
-
Qing-ping, S.1
Xiao-dong, J.2
Feng, D.3
Yan, L.4
Mei-ling, Y.5
Jin-xiu, Z.6
-
7
-
-
0032522873
-
Incidence of adverse drug reactions in hospitalized patients: a meta-analysis of prospective studies
-
COI: 1:STN:280:DyaK1c3hsFSnsQ%3D%3D, PID: 9555760
-
Lazarou J, Pomeranz BH, Corey PN. Incidence of adverse drug reactions in hospitalized patients: a meta-analysis of prospective studies. Jama. 1998;279(15):1200–5.
-
(1998)
Jama
, vol.279
, Issue.15
, pp. 1200-1205
-
-
Lazarou, J.1
Pomeranz, B.H.2
Corey, P.N.3
-
8
-
-
84872331521
-
-
[FDA Adverse Event Reporting System (FAERS):, accessed on May 22 2015.]
-
FDA Adverse Event Reporting System (FAERS) [FDA Adverse Event Reporting System (FAERS): http://www.fda.gov/Drugs/GuidanceComplianceRegulatoryInformation/Surveillance/AdverseDrugEffects/default.htm, accessed on May 22 2015.]
-
FDA Adverse Event Reporting System (FAERS)
-
-
-
9
-
-
0028177434
-
The vaccine adverse event reporting system (VAERS)
-
COI: 1:STN:280:DyaK2czhtVygtw%3D%3D, PID: 8036829
-
Chen RT, Rastogi SC, Mullen JR, Hayes SW, Cochi SL, Donlon JA, et al. The vaccine adverse event reporting system (VAERS). Vaccine. 1994;12(6):542–50.
-
(1994)
Vaccine
, vol.12
, Issue.6
, pp. 542-550
-
-
Chen, R.T.1
Rastogi, S.C.2
Mullen, J.R.3
Hayes, S.W.4
Cochi, S.L.5
Donlon, J.A.6
-
10
-
-
1942484441
-
Understanding vaccine safety information from the vaccine adverse event reporting system
-
PID: 15071280
-
Varricchio F, Iskander J, Destefano F, Ball R, Pless R, Braun MM, et al. Understanding vaccine safety information from the vaccine adverse event reporting system. Pediatr Infect Dis J. 2004;23(4):287–94.
-
(2004)
Pediatr Infect Dis J
, vol.23
, Issue.4
, pp. 287-294
-
-
Varricchio, F.1
Iskander, J.2
Destefano, F.3
Ball, R.4
Pless, R.5
Braun, M.M.6
-
11
-
-
84927944331
-
A 2012 workshop: vaccine and drug ontology in the study of mechanism and effect (VDOSME 2012)
-
He Y, Toldo L, Burns G, Tao C, Abernethy DR. A 2012 workshop: vaccine and drug ontology in the study of mechanism and effect (VDOSME 2012). J Biomed Semant. 2012;3(1):12.
-
(2012)
J Biomed Semant
, vol.3
, Issue.1
, pp. 12
-
-
He, Y.1
Toldo, L.2
Burns, G.3
Tao, C.4
Abernethy, D.R.5
-
12
-
-
0032991290
-
The medical dictionary for regulatory activities (MedDRA)
-
COI: 1:CAS:528:DC%2BD3cXltleksQ%3D%3D, PID: 10082069
-
Brown EG, Wood L, Wood S. The medical dictionary for regulatory activities (MedDRA). Drug Saf. 1999;20(2):109–17.
-
(1999)
Drug Saf
, vol.20
, Issue.2
, pp. 109-117
-
-
Brown, E.G.1
Wood, L.2
Wood, S.3
-
13
-
-
85017632832
-
-
Introductory Guide MedDRA Version 18.0 []
-
Introductory Guide MedDRA Version 18.0 [http://www.meddra.org/sites/default/files/guidance/file/intguide_18_0_english.pdf]
-
-
-
-
14
-
-
85017613562
-
-
The Common Terminology Criteria for Adverse Events (CTCAE) [, access on October 7, 2015]
-
The Common Terminology Criteria for Adverse Events (CTCAE) [http://evs.nci.nih.gov/ftp1/CTCAE/About.html, access on October 7, 2015]
-
-
-
-
15
-
-
85017584143
-
-
The WHO Adverse Reaction Terminology – WHO-ART []
-
The WHO Adverse Reaction Terminology – WHO-ART [https://www.umc-products.com/graphics/28010.pdf]
-
-
-
-
16
-
-
0034069495
-
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
-
COI: 1:CAS:528:DC%2BD3cXjtFSlsbc%3D, PID: 10802651
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet. 2000;25(1):25–9.
-
(2000)
Nat Genet
, vol.25
, Issue.1
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
-
17
-
-
84949805606
-
Modeling biomedical experimental processes with OBI
-
Brinkman RR, Courtot M, Derom D, Fostel JM, He Y, Lord P, et al. Modeling biomedical experimental processes with OBI. J Biomed Semant. 2010;1(1):S7.
-
(2010)
J Biomed Semant
, vol.1
, Issue.1
, pp. S7
-
-
Brinkman, R.R.1
Courtot, M.2
Derom, D.3
Fostel, J.M.4
He, Y.5
Lord, P.6
-
18
-
-
84922775456
-
Development of an application Ontology for beta cell genomics based on the Ontology for biomedical investigations
-
CEUR Workshop Proceedings, Montreal, Qc, Canada
-
Zheng J, Manduchi E, Stoeckert Jr CJ. Development of an application Ontology for beta cell genomics based on the Ontology for biomedical investigations. In: The 4th International Conference on Biomedical Ontology (ICBO-2013): July 7–12 2013. Montreal, Qc, Canada: CEUR Workshop Proceedings; 2013. p. 62–7.
-
(2013)
The 4th International Conference on Biomedical Ontology (ICBO-2013): July 7–12 2013
, pp. 62-67
-
-
Zheng, J.1
Manduchi, E.2
Stoeckert, C.J.3
-
19
-
-
84949805606
-
Modeling biomedical experimental processes with OBI
-
Brinkman RR, Courtot M, Derom D, Fostel J, He Y, Lord P, et al. Modeling biomedical experimental processes with OBI. J Biomed Semant. 2010;21(21):S27. doi:10.1186/2041-1480-1181-S1181-S1187.
-
(2010)
J Biomed Semant
, vol.21
, Issue.21
, pp. S27
-
-
Brinkman, R.R.1
Courtot, M.2
Derom, D.3
Fostel, J.4
He, Y.5
Lord, P.6
-
20
-
-
84903289157
-
Standardized metadata for human pathogen/vector genomic sequences
-
PID: 24936976
-
Dugan VG, Emrich SJ, Giraldo-Calderon GI, Harb OS, Newman RM, Pickett BE, et al. Standardized metadata for human pathogen/vector genomic sequences. PLoS One. 2014;9(6), e99979.
-
(2014)
PLoS One
, vol.9
, Issue.6
-
-
Dugan, V.G.1
Emrich, S.J.2
Giraldo-Calderon, G.I.3
Harb, O.S.4
Newman, R.M.5
Pickett, B.E.6
-
21
-
-
84902319909
-
CLO: The Cell Line Ontology
-
Sarntivijai S, Lin Y, Xiang Z, Meehan TF, Diehl AD, Vempati UD, et al. CLO: The Cell Line Ontology. J Biomed Semant. 2014;5:37.
-
(2014)
J Biomed Semant
, vol.5
, pp. 37
-
-
Sarntivijai, S.1
Lin, Y.2
Xiang, Z.3
Meehan, T.F.4
Diehl, A.D.5
Vempati, U.D.6
-
22
-
-
84891818110
-
VO: Vaccine Ontology
-
Nature Precedings, Buffalo, NY, USA
-
He Y, Cowell L, Diehl AD, Mobley HL, Peters B, Ruttenberg A, et al. VO: Vaccine Ontology. In: The 1st International Conference on Biomedical Ontology (ICBO-2009): July 24–26 2009. Buffalo, NY, USA: Nature Precedings; 2009.
-
(2009)
The 1st International Conference on Biomedical Ontology (ICBO-2009): July 24–26 2009
-
-
He, Y.1
Cowell, L.2
Diehl, A.D.3
Mobley, H.L.4
Peters, B.5
Ruttenberg, A.6
-
23
-
-
80052697346
-
Mining of vaccine-associated IFN-gamma gene interaction networks using the Vaccine Ontology
-
Ozgur A, Xiang Z, Radev DR, He Y. Mining of vaccine-associated IFN-gamma gene interaction networks using the Vaccine Ontology. J Biomed Semant. 2011;2(2):S8.
-
(2011)
J Biomed Semant
, vol.2
, Issue.2
, pp. S8
-
-
Ozgur, A.1
Xiang, Z.2
Radev, D.R.3
He, Y.4
-
24
-
-
84887118225
-
Ontology representation and analysis of vaccine formulation and administration and their effects on vaccine immune responses
-
Lin Y, He Y. Ontology representation and analysis of vaccine formulation and administration and their effects on vaccine immune responses. J Biomed Semant. 2012;3(1):17.
-
(2012)
J Biomed Semant
, vol.3
, Issue.1
, pp. 17
-
-
Lin, Y.1
He, Y.2
-
25
-
-
78651282658
-
Protegen: a web-based protective antigen database and analysis system
-
COI: 1:CAS:528:DC%2BC3sXivF2mtLw%3D, PID: 20959289
-
Yang B, Sayers S, Xiang Z, He Y. Protegen: a web-based protective antigen database and analysis system. Nucleic Acids Res. 2011;39(Database issue):D1073–1078.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.Database issue
, pp. D1073-D1078
-
-
Yang, B.1
Sayers, S.2
Xiang, Z.3
He, Y.4
-
26
-
-
84859727707
-
Vaxjo: a web-based vaccine adjuvant database and its application for analysis of vaccine adjuvants and their uses in vaccine development
-
PID: 22505817
-
Sayers S, Ulysse G, Xiang Z, He Y. Vaxjo: a web-based vaccine adjuvant database and its application for analysis of vaccine adjuvants and their uses in vaccine development. J Biomed Biotechnol. 2012;2012:831486.
-
(2012)
J Biomed Biotechnol
, vol.2012
, pp. 831486
-
-
Sayers, S.1
Ulysse, G.2
Xiang, Z.3
He, Y.4
-
27
-
-
84872603820
-
Systematic annotation and analysis of “virmugens”—virulence factors whose mutants can be used as live attenuated vaccines
-
COI: 1:CAS:528:DC%2BC38XhvV2kt7nN, PID: 23219434
-
Racz R, Chung M, Xiang Z, He Y. Systematic annotation and analysis of “virmugens”—virulence factors whose mutants can be used as live attenuated vaccines. Vaccine. 2013;31(5):797–805.
-
(2013)
Vaccine
, vol.31
, Issue.5
, pp. 797-805
-
-
Racz, R.1
Chung, M.2
Xiang, Z.3
He, Y.4
-
28
-
-
84891766373
-
Updates on the Web-based VIOLIN Vaccine Database and Analysis System
-
(Database Issue):1–9
-
He Y, Racz R, Sayers S, Lin Y, Todd TE, Hur J, et al. Updates on the Web-based VIOLIN Vaccine Database and Analysis System. Nucl Acids Res. 2013. doi:10.1093/nar/gkt1133. (Database Issue):1–9.
-
(2013)
Nucl Acids Res
-
-
He, Y.1
Racz, R.2
Sayers, S.3
Lin, Y.4
Todd, T.E.5
Hur, J.6
-
29
-
-
80052033833
-
Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network
-
PID: 21871085
-
Hur J, Xiang Z, Feldman EL, He Y. Ontology-based Brucella vaccine literature indexing and systematic analysis of gene-vaccine association network. BMC Immunol. 2011;12:49.
-
(2011)
BMC Immunol
, vol.12
, pp. 49
-
-
Hur, J.1
Xiang, Z.2
Feldman, E.L.3
He, Y.4
-
30
-
-
84978127824
-
Building a drug ontology based on RxNorm and other sources
-
Hanna J, Joseph E, Brochhausen M, Hogan WR. Building a drug ontology based on RxNorm and other sources. J Biomed Semant. 2013;4(1):44.
-
(2013)
J Biomed Semant
, vol.4
, Issue.1
, pp. 44
-
-
Hanna, J.1
Joseph, E.2
Brochhausen, M.3
Hogan, W.R.4
-
31
-
-
84927925404
-
OAE: The Ontology of Adverse Events
-
He Y, Sarntivijai S, Lin Y, Xiang Z, Guo A, Zhang S, et al. OAE: The Ontology of Adverse Events. J Biomed Semant. 2014;5:29.
-
(2014)
J Biomed Semant
, vol.5
, pp. 29
-
-
He, Y.1
Sarntivijai, S.2
Lin, Y.3
Xiang, Z.4
Guo, A.5
Zhang, S.6
-
32
-
-
36148964050
-
Heterogeneity in vaccine immune response: the role of immunogenetics and the emerging field of vaccinomics
-
COI: 1:CAS:528:DC%2BD2sXht1ymu7vN, PID: 17971814
-
Poland GA, Ovsyannikova IG, Jacobson RM, Smith DI. Heterogeneity in vaccine immune response: the role of immunogenetics and the emerging field of vaccinomics. Clin Pharmacol Ther. 2007;82(6):653–64.
-
(2007)
Clin Pharmacol Ther
, vol.82
, Issue.6
, pp. 653-664
-
-
Poland, G.A.1
Ovsyannikova, I.G.2
Jacobson, R.M.3
Smith, D.I.4
-
33
-
-
66849098142
-
Application of pharmacogenomics to vaccines
-
COI: 1:CAS:528:DC%2BD1MXmtVahsLc%3D, PID: 19450131
-
Poland GA, Ovsyannikova IG, Jacobson RM. Application of pharmacogenomics to vaccines. Pharmacogenomics. 2009;10(5):837–52.
-
(2009)
Pharmacogenomics
, vol.10
, Issue.5
, pp. 837-852
-
-
Poland, G.A.1
Ovsyannikova, I.G.2
Jacobson, R.M.3
-
34
-
-
84902341834
-
Ontology-supported research on vaccine efficacy, safety and integrative biological networks
-
COI: 1:CAS:528:DC%2BC2cXps1Sqtr0%3D, PID: 24909153
-
He Y. Ontology-supported research on vaccine efficacy, safety and integrative biological networks. Expert Rev Vaccines. 2014;13(7):825–41.
-
(2014)
Expert Rev Vaccines
, vol.13
, Issue.7
, pp. 825-841
-
-
He, Y.1
-
35
-
-
84922211548
-
Finding our way through phenotypes
-
PID: 25562316
-
Deans AR, Lewis SE, Huala E, Anzaldo SS, Ashburner M, Balhoff JP, et al. Finding our way through phenotypes. PLoS Biol. 2015;13(1), e1002033.
-
(2015)
PLoS Biol
, vol.13
, Issue.1
-
-
Deans, A.R.1
Lewis, S.E.2
Huala, E.3
Anzaldo, S.S.4
Ashburner, M.5
Balhoff, J.P.6
-
37
-
-
84864113283
-
Challenges in coding adverse events in clinical trials: a systematic review
-
COI: 1:CAS:528:DC%2BC38XhtFSkt73O, PID: 22911755
-
Schroll JB, Maund E, Gotzsche PC. Challenges in coding adverse events in clinical trials: a systematic review. PLoS One. 2012;7(7):e41174.
-
(2012)
PLoS One
, vol.7
, Issue.7
-
-
Schroll, J.B.1
Maund, E.2
Gotzsche, P.C.3
-
38
-
-
85017615015
-
-
The Uppsala Monitoring Centre: The WHO Adverse Reaction Terminology – WHO-ART, Terminology for coding clinical information in relation to drug therapy. In.; 2015
-
The Uppsala Monitoring Centre: The WHO Adverse Reaction Terminology – WHO-ART, Terminology for coding clinical information in relation to drug therapy. In.; 2015: http://www.umc-products.com/graphics/28010.pdf.
-
-
-
-
39
-
-
34748883028
-
SNOMED CT: utility for a general medical evaluation template
-
Brown SH, Elkin PL, Bauer BA, Wahner-Roedler D, Husser CS, et al. SNOMED CT: utility for a general medical evaluation template. AMIA Annl Symp Proc/AMIA Symp AMIA Symp. 2006; 101–105.
-
(2006)
AMIA Annl Symp Proc/AMIA Symp AMIA Symp
, pp. 101-105
-
-
Brown, S.H.1
Elkin, P.L.2
Bauer, B.A.3
Wahner-Roedler, D.4
Husser, C.S.5
-
40
-
-
50649088892
-
Predictive value of ICD-9-CM codes used in vaccine safety research
-
COI: 1:STN:280:DC%2BD1crnvFWjtg%3D%3D, PID: 18690366
-
Mullooly JP, Donahue JG, DeStefano F, Baggs J, Eriksen E, Group VSDDQW. Predictive value of ICD-9-CM codes used in vaccine safety research. Methods Inf Med. 2008;47(4):328–35.
-
(2008)
Methods Inf Med
, vol.47
, Issue.4
, pp. 328-335
-
-
Mullooly, J.P.1
Donahue, J.G.2
DeStefano, F.3
Baggs, J.4
Eriksen, E.5
Group, V.S.D.D.Q.W.6
-
42
-
-
0036300273
-
Effects of coding dictionary on signal generation: a consideration of use of MedDRA compared with WHO-ART
-
PID: 12071782
-
Brown EG. Effects of coding dictionary on signal generation: a consideration of use of MedDRA compared with WHO-ART. Drug Saf. 2002;25(6):445–52.
-
(2002)
Drug Saf
, vol.25
, Issue.6
, pp. 445-452
-
-
Brown, E.G.1
-
43
-
-
84921306620
-
Bridging data models and terminologies to support adverse drug event reporting using EHR data
-
COI: 1:STN:280:DC%2BC2MzmtlKnsQ%3D%3D, PID: 25487120
-
Declerck G, Hussain S, Daniel C, Yuksel M, Laleci GB, Twagirumukiza M, et al. Bridging data models and terminologies to support adverse drug event reporting using EHR data. Methods Inf Med. 2015;54(1):24–31.
-
(2015)
Methods Inf Med
, vol.54
, Issue.1
, pp. 24-31
-
-
Declerck, G.1
Hussain, S.2
Daniel, C.3
Yuksel, M.4
Laleci, G.B.5
Twagirumukiza, M.6
-
44
-
-
84865088478
-
Evaluation of alternative standardized terminologies for medical conditions within a network of observational healthcare databases
-
PID: 22683994
-
Reich C, Ryan PB, Stang PE, Rocca M. Evaluation of alternative standardized terminologies for medical conditions within a network of observational healthcare databases. J Biomed Inform. 2012;45(4):689–96.
-
(2012)
J Biomed Inform
, vol.45
, Issue.4
, pp. 689-696
-
-
Reich, C.1
Ryan, P.B.2
Stang, P.E.3
Rocca, M.4
-
45
-
-
77958610135
-
Determining correspondences between high-frequency MedDRA concepts and SNOMED: a case study
-
Nadkarni PM, Darer JD. Determining correspondences between high-frequency MedDRA concepts and SNOMED: a case study. BMC Med Inform Decis Making. 2010;10:66.
-
(2010)
BMC Med Inform Decis Making
, vol.10
, pp. 66
-
-
Nadkarni, P.M.1
Darer, J.D.2
-
46
-
-
79953786495
-
Using SNOMED CT in combination with MedDRA for reporting signal detection and adverse drug reactions reporting
-
Bodenreider O. Using SNOMED CT in combination with MedDRA for reporting signal detection and adverse drug reactions reporting. AMIA Annu Symp Proc/AMIA Symp AMIA Symp. 2009;2009:45–9.
-
(2009)
AMIA Annu Symp Proc/AMIA Symp AMIA Symp
, vol.2009
, pp. 45-49
-
-
Bodenreider, O.1
-
47
-
-
84906311581
-
Clarity in the usage of the terms ontology, taxonomy and classification
-
Van Rees R. Clarity in the usage of the terms ontology, taxonomy and classification. CIB Report. 2003;284(432):1–8.
-
(2003)
CIB Report
, vol.284
, Issue.432
, pp. 1-8
-
-
Van Rees, R.1
-
49
-
-
84861371318
-
Needs for an expanded ontology-based classification of adverse drug reactions and related mechanisms
-
COI: 1:CAS:528:DC%2BC38XnsFGnsLw%3D, PID: 22609907
-
Zhichkin PE, Athey BD, Avigan MI, Abernethy DR. Needs for an expanded ontology-based classification of adverse drug reactions and related mechanisms. Clin Pharmacol Ther. 2012;91(6):963–5.
-
(2012)
Clin Pharmacol Ther
, vol.91
, Issue.6
, pp. 963-965
-
-
Zhichkin, P.E.1
Athey, B.D.2
Avigan, M.I.3
Abernethy, D.R.4
-
50
-
-
84892150562
-
From concept representations to ontologies: a paradigm shift in health informatics?
-
PID: 24523987
-
Schulz S, Balkanyi L, Cornet R, Bodenreider O. From concept representations to ontologies: a paradigm shift in health informatics? Healthc Inform Res. 2013;19(4):235–42.
-
(2013)
Healthc Inform Res
, vol.19
, Issue.4
, pp. 235-242
-
-
Schulz, S.1
Balkanyi, L.2
Cornet, R.3
Bodenreider, O.4
-
51
-
-
84908330794
-
Mapping between the OBO and OWL ontology languages
-
Tirmizi SH, Aitken S, Moreira DA, Mungall C, Sequeda J, Shah NH, et al. Mapping between the OBO and OWL ontology languages. J Biomed Semant. 2011;2(1):S3.
-
(2011)
J Biomed Semant
, vol.2
, Issue.1
, pp. S3
-
-
Tirmizi, S.H.1
Aitken, S.2
Moreira, D.A.3
Mungall, C.4
Sequeda, J.5
Shah, N.H.6
-
52
-
-
85017664343
-
-
W3C: OWL 2 Web Ontology Language document overview. 2009:. Accessed on March 20091021, 20092014
-
W3C: OWL 2 Web Ontology Language document overview. 2009: http://www.w3.org/TR/2009/REC-owl2002-overview-20091027/. Accessed on March 20091021, 20092014.
-
-
-
-
53
-
-
35948989284
-
The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
-
COI: 1:CAS:528:DC%2BD2sXht1Oru7zK, PID: 17989687
-
Smith B, Ashburner M, Rosse C, Bard J, Bug W, Ceusters W, et al. The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration. Nat Biotechnol. 2007;25(11):1251–5.
-
(2007)
Nat Biotechnol
, vol.25
, Issue.11
, pp. 1251-1255
-
-
Smith, B.1
Ashburner, M.2
Rosse, C.3
Bard, J.4
Bug, W.5
Ceusters, W.6
-
54
-
-
84875980281
-
SNAP and SPAN: towards dynamic spatial Ontology
-
Grenon P, Smith B. SNAP and SPAN: towards dynamic spatial Ontology. Spat Cogn Comput. 2004;4(1):69–103.
-
(2004)
Spat Cogn Comput
, vol.4
, Issue.1
, pp. 69-103
-
-
Grenon, P.1
Smith, B.2
-
56
-
-
84864973980
-
Ontobee: a linked data server and browser for ontology terms
-
CEUR Workshop Proceedings, Buffalo, NY, USA
-
Xiang Z, Mungall C, Ruttenberg A, He Y. Ontobee: a linked data server and browser for ontology terms. In: The 2nd International Conference on Biomedical Ontologies (ICBO): 2011. Buffalo, NY, USA: CEUR Workshop Proceedings; 2013. p. 279–81.
-
(2013)
The 2nd International Conference on Biomedical Ontologies (ICBO): 2011
, pp. 279-281
-
-
Xiang, Z.1
Mungall, C.2
Ruttenberg, A.3
He, Y.4
-
57
-
-
84891757848
-
The Ontology of Vaccine Adverse Events (OVAE) and its usage in representing and analyzing adverse events associated with US-licensed human vaccines
-
Marcos E, Zhao B, He Y. The Ontology of Vaccine Adverse Events (OVAE) and its usage in representing and analyzing adverse events associated with US-licensed human vaccines. J Biomed Semant. 2013;4(1):40.
-
(2013)
J Biomed Semant
, vol.4
, Issue.1
, pp. 40
-
-
Marcos, E.1
Zhao, B.2
He, Y.3
-
58
-
-
38549089606
-
VIOLIN: vaccine investigation and online information network
-
COI: 1:CAS:528:DC%2BD1cXhtVSqsLY%3D, PID: 18025042
-
Xiang Z, Todd T, Ku KP, Kovacic BL, Larson CB, Chen F, et al. VIOLIN: vaccine investigation and online information network. Nucleic Acids Res. 2008;36(Database issue):D923–928.
-
(2008)
Nucleic Acids Res
, vol.36
, Issue.Database issue
, pp. D923-D928
-
-
Xiang, Z.1
Todd, T.2
Ku, K.P.3
Kovacic, B.L.4
Larson, C.B.5
Chen, F.6
-
59
-
-
84891766373
-
Updates on the web-based VIOLIN vaccine database and analysis system
-
COI: 1:CAS:528:DC%2BC2cXos1Sj, PID: 24259431
-
He Y, Racz R, Sayers S, Lin Y, Todd T, Hur J, et al. Updates on the web-based VIOLIN vaccine database and analysis system. Nucleic Acids Res. 2014;42(1):D1124–1132.
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.1
, pp. D1124-D1132
-
-
He, Y.1
Racz, R.2
Sayers, S.3
Lin, Y.4
Todd, T.5
Hur, J.6
-
61
-
-
84887030980
-
Identification of fever and vaccine-associated gene interaction networks using ontology-based literature mining
-
Hur J, Ozgur A, Xiang Z, He Y. Identification of fever and vaccine-associated gene interaction networks using ontology-based literature mining. J Biomed Semant. 2012;3(1):18.
-
(2012)
J Biomed Semant
, vol.3
, Issue.1
, pp. 18
-
-
Hur, J.1
Ozgur, A.2
Xiang, Z.3
He, Y.4
-
62
-
-
84915776731
-
Network-based analysis of vaccine-related associations reveals consistent knowledge with the vaccine ontology
-
Zhang Y, Tao C, He Y, Kanjamala P, Liu H. Network-based analysis of vaccine-related associations reveals consistent knowledge with the vaccine ontology. J Biomed Semant. 2013;4(1):33.
-
(2013)
J Biomed Semant
, vol.4
, Issue.1
, pp. 33
-
-
Zhang, Y.1
Tao, C.2
He, Y.3
Kanjamala, P.4
Liu, H.5
-
63
-
-
85017651263
-
-
Lisbon, Portugal
-
Guo A, Racz R, Hur J, Lin Y, Xiang Z, Zhao L, et al. Ontology-based collection, representation and analysis of drug-associated neuropathy adverse events In: The 4th International Workshop on Vaccine and Drug Ontology Studies (VDOS-2015), in conjunction with the International Conference on Biomedical Ontologies (ICBO-2015): July 27–30 2015; Lisbon, Portugal; 2015. p1–6.
-
(2015)
Ontology-based collection, representation and analysis of drug-associated neuropathy adverse events In: The 4th International Workshop on Vaccine and Drug Ontology Studies (VDOS-2015), in conjunction with the International Conference on Biomedical Ontologies (ICBO-2015): July 27–30 2015
, pp. p1-p6
-
-
Guo, A.1
Racz, R.2
Hur, J.3
Lin, Y.4
Xiang, Z.5
Zhao, L.6
-
64
-
-
79959652930
-
Normalized names for clinical drugs: RxNorm at 6 years
-
Nelson SJ, Zeng K, Kilbourne J, Powell T, Moore R. Normalized names for clinical drugs: RxNorm at 6 years. J Ame Med Inform Assoc: JAMIA. 2011;18(4):441–8.
-
(2011)
J Ame Med Inform Assoc: JAMIA
, vol.18
, Issue.4
, pp. 441-448
-
-
Nelson, S.J.1
Zeng, K.2
Kilbourne, J.3
Powell, T.4
Moore, R.5
-
65
-
-
34748824942
-
Categorical information in pharmaceutical terminologies
-
Carter JS, Brown SH, Bauer BA, Elkin PL, Erlbaum MS, Froehling DA, et al. Categorical information in pharmaceutical terminologies. AMIA Annu Symp Proc/AMIA Symp AMIA Symp. 2006; 116–120.
-
(2006)
AMIA Annu Symp Proc/AMIA Symp AMIA Symp
, pp. 116-120
-
-
Carter, J.S.1
Brown, S.H.2
Bauer, B.A.3
Elkin, P.L.4
Erlbaum, M.S.5
Froehling, D.A.6
-
66
-
-
84876560358
-
The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013
-
COI: 1:CAS:528:DC%2BC38XhvV2ktrjE, PID: 23180789
-
Hastings J, de Matos P, Dekker A, Ennis M, Harsha B, Kale N, et al. The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013. Nucleic Acids Res. 2013;41(Database issue):D456–463.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.Database issue
, pp. D456-D463
-
-
Hastings, J.1
de Matos, P.2
Dekker, A.3
Ennis, M.4
Harsha, B.5
Kale, N.6
-
67
-
-
34447268895
-
The immunogenetics of smallpox vaccination
-
COI: 1:CAS:528:DC%2BD2sXosVygsr0%3D, PID: 17570108
-
Stanley Jr SL, Frey SE, Taillon-Miller P, Guo J, Miller RD, Koboldt DC, et al. The immunogenetics of smallpox vaccination. J Infect Dis. 2007;196(2):212–9.
-
(2007)
J Infect Dis
, vol.196
, Issue.2
, pp. 212-219
-
-
Stanley, S.L.1
Frey, S.E.2
Taillon-Miller, P.3
Guo, J.4
Miller, R.D.5
Koboldt, D.C.6
-
68
-
-
46349088009
-
Genetic basis for adverse events after smallpox vaccination
-
COI: 1:CAS:528:DC%2BD1cXos1WrsLk%3D, PID: 18454680
-
Reif DM, McKinney BA, Motsinger AA, Chanock SJ, Edwards KM, Rock MT, et al. Genetic basis for adverse events after smallpox vaccination. J Infect Dis. 2008;198(1):16–22.
-
(2008)
J Infect Dis
, vol.198
, Issue.1
, pp. 16-22
-
-
Reif, D.M.1
McKinney, B.A.2
Motsinger, A.A.3
Chanock, S.J.4
Edwards, K.M.5
Rock, M.T.6
-
69
-
-
48749110535
-
Case of yellow fever vaccine--associated viscerotropic disease with prolonged viremia, robust adaptive immune responses, and polymorphisms in CCR5 and RANTES genes
-
PID: 18598196
-
Pulendran B, Miller J, Querec TD, Akondy R, Moseley N, Laur O, et al. Case of yellow fever vaccine--associated viscerotropic disease with prolonged viremia, robust adaptive immune responses, and polymorphisms in CCR5 and RANTES genes. J Infect Dis. 2008;198(4):500–7.
-
(2008)
J Infect Dis
, vol.198
, Issue.4
, pp. 500-507
-
-
Pulendran, B.1
Miller, J.2
Querec, T.D.3
Akondy, R.4
Moseley, N.5
Laur, O.6
-
70
-
-
84927918683
-
The ontology of genetic susceptibility factors (OGSF) and its application in modeling genetic susceptibility to vaccine adverse events
-
Lin Y, He Y. The ontology of genetic susceptibility factors (OGSF) and its application in modeling genetic susceptibility to vaccine adverse events. J Biomed Semant. 2014;5:19.
-
(2014)
J Biomed Semant
, vol.5
, pp. 19
-
-
Lin, Y.1
He, Y.2
-
71
-
-
80052727699
-
Vaccinomics and a new paradigm for the development of preventive vaccines against viral infections
-
COI: 1:CAS:528:DC%2BC3MXht1Sisb7O, PID: 21732819
-
Poland GA, Ovsyannikova IG, Kennedy RB, Haralambieva IH, Jacobson RM. Vaccinomics and a new paradigm for the development of preventive vaccines against viral infections. OMICS. 2011;15(9):625–36.
-
(2011)
OMICS
, vol.15
, Issue.9
, pp. 625-636
-
-
Poland, G.A.1
Ovsyannikova, I.G.2
Kennedy, R.B.3
Haralambieva, I.H.4
Jacobson, R.M.5
-
72
-
-
84882243672
-
Vaccinomics, adversomics, and the immune response network theory: individualized vaccinology in the 21st century
-
PID: 23755893
-
Poland GA, Kennedy RB, McKinney BA, Ovsyannikova IG, Lambert ND, Jacobson RM, et al. Vaccinomics, adversomics, and the immune response network theory: individualized vaccinology in the 21st century. Semin Immunol. 2013;25(2):89–103.
-
(2013)
Semin Immunol
, vol.25
, Issue.2
, pp. 89-103
-
-
Poland, G.A.1
Kennedy, R.B.2
McKinney, B.A.3
Ovsyannikova, I.G.4
Lambert, N.D.5
Jacobson, R.M.6
-
73
-
-
0033787577
-
Reverse vaccinology
-
COI: 1:CAS:528:DC%2BD3cXotVOit70%3D, PID: 11050440
-
Rappuoli R. Reverse vaccinology. Curr Opin Microbiol. 2000;3(5):445–50.
-
(2000)
Curr Opin Microbiol
, vol.3
, Issue.5
, pp. 445-450
-
-
Rappuoli, R.1
-
75
-
-
0033130136
-
A unifying concept: the history of cell theory
-
COI: 1:CAS:528:DyaK1MXksVKisbs%3D, PID: 10559875
-
Mazzarello P. A unifying concept: the history of cell theory. Nat Cell Biol. 1999;1(1):E13–15.
-
(1999)
Nat Cell Biol
, vol.1
, Issue.1
, pp. E13-E15
-
-
Mazzarello, P.1
-
76
-
-
0024472594
-
Immune network theory
-
COI: 1:STN:280:DyaK3c%2FgslGruw%3D%3D, PID: 2477327
-
Perelson AS. Immune network theory. Immunol Rev. 1989;110:5–36.
-
(1989)
Immunol Rev
, vol.110
, pp. 5-36
-
-
Perelson, A.S.1
-
77
-
-
0003562737
-
-
W. W. Freeman and Company, New York
-
Griffiths JF, Miller JH, Suzuki DT, Lewontin RC, Gelbart WM. An Introduction to Genetic Analysis. 7th ed. New York: W. W. Freeman and Company; 2000.
-
(2000)
An Introduction to Genetic Analysis
-
-
Griffiths, J.F.1
Miller, J.H.2
Suzuki, D.T.3
Lewontin, R.C.4
Gelbart, W.M.5
-
78
-
-
0040172184
-
-
Effectiveness [https://en.wikipedia.org/wiki/Effectiveness]
-
Effectiveness
-
-
-
79
-
-
0022894982
-
Efficacy and effectiveness trials (and other phases of research) in the development of health promotion programs
-
COI: 1:STN:280:DyaL2s%2FktFegtg%3D%3D, PID: 3534875
-
Flay BR. Efficacy and effectiveness trials (and other phases of research) in the development of health promotion programs. Prev Med. 1986;15(5):451–74.
-
(1986)
Prev Med
, vol.15
, Issue.5
, pp. 451-474
-
-
Flay, B.R.1
-
82
-
-
84904490167
-
The efficacy-effectiveness distinction in trials of alcohol brief intervention
-
PID: 25127717
-
Heather N. The efficacy-effectiveness distinction in trials of alcohol brief intervention. Addict Sci Clin Pract. 2014;9:13.
-
(2014)
Addict Sci Clin Pract
, vol.9
, pp. 13
-
-
Heather, N.1
-
83
-
-
77951918055
-
Vaccine epidemiology: efficacy, effectiveness, and the translational research roadmap
-
PID: 20402594
-
Weinberg GA, Szilagyi PG. Vaccine epidemiology: efficacy, effectiveness, and the translational research roadmap. J Infect Dis. 2010;201(11):1607–10.
-
(2010)
J Infect Dis
, vol.201
, Issue.11
, pp. 1607-1610
-
-
Weinberg, G.A.1
Szilagyi, P.G.2
-
84
-
-
31344474880
-
Complex networks: structure and dynamics
-
Boccaletti S, Latora V, Moreno Y, Chavez M, Hwang DU. Complex networks: structure and dynamics. Phys Rep. 2006;424:175–308.
-
(2006)
Phys Rep
, vol.424
, pp. 175-308
-
-
Boccaletti, S.1
Latora, V.2
Moreno, Y.3
Chavez, M.4
Hwang, D.U.5
-
85
-
-
22344438058
-
Electronic data sources for kinetic models of cell signaling
-
COI: 1:CAS:528:DC%2BD2MXlvF2ltrc%3D, PID: 16002985
-
HarshaRani GV, Vayttaden SJ, Bhalla US. Electronic data sources for kinetic models of cell signaling. J Biochem. 2005;137(6):653–7.
-
(2005)
J Biochem
, vol.137
, Issue.6
, pp. 653-657
-
-
HarshaRani, G.V.1
Vayttaden, S.J.2
Bhalla, U.S.3
-
86
-
-
78651275182
-
Reactome: a database of reactions, pathways and biological processes
-
COI: 1:CAS:528:DC%2BC3sXivF2ltLw%3D, PID: 21067998
-
Croft D, O'Kelly G, Wu G, Haw R, Gillespie M, Matthews L, et al. Reactome: a database of reactions, pathways and biological processes. Nucleic Acids Res. 2011;39(Database issue):D691–697.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.Database issue
, pp. D691-D697
-
-
Croft, D.1
O'Kelly, G.2
Wu, G.3
Haw, R.4
Gillespie, M.5
Matthews, L.6
-
87
-
-
0345863935
-
The KEGG resource for deciphering the genome
-
COI: 1:CAS:528:DC%2BD3sXhtVSrurvO, PID: 14681412
-
Kanehisa M, Goto S, Kawashima S, Okuno Y, Hattori M. The KEGG resource for deciphering the genome. Nucleic Acids Res. 2004;32(Database issue):D277–280.
-
(2004)
Nucleic Acids Res
, vol.32
, Issue.Database issue
, pp. D277-D280
-
-
Kanehisa, M.1
Goto, S.2
Kawashima, S.3
Okuno, Y.4
Hattori, M.5
-
88
-
-
84855882668
-
Browsing metabolic and regulatory networks with BioCyc
-
COI: 1:CAS:528:DC%2BC38XhslaitLrL, PID: 22144155
-
Latendresse M, Paley S, Karp PD. Browsing metabolic and regulatory networks with BioCyc. Methods Mol Biol. 2012;804:197–216.
-
(2012)
Methods Mol Biol
, vol.804
, pp. 197-216
-
-
Latendresse, M.1
Paley, S.2
Karp, P.D.3
-
90
-
-
77950352522
-
Pharmacogenomics and bioinformatics: PharmGKB
-
COI: 1:CAS:528:DC%2BC3cXkvVOiur0%3D, PID: 20350130
-
Thorn CF, Klein TE, Altman RB. Pharmacogenomics and bioinformatics: PharmGKB. Pharmacogenomics. 2010;11(4):501–5.
-
(2010)
Pharmacogenomics
, vol.11
, Issue.4
, pp. 501-505
-
-
Thorn, C.F.1
Klein, T.E.2
Altman, R.B.3
-
91
-
-
84938805888
-
Development and application of an interaction network ontology for literature mining of vaccine-associated gene-gene interactions
-
Hur J, Ozgur A, Xiang Z, He Y. Development and application of an interaction network ontology for literature mining of vaccine-associated gene-gene interactions. J Biomed Semant. 2015;6:2.
-
(2015)
J Biomed Semant
, vol.6
, pp. 2
-
-
Hur, J.1
Ozgur, A.2
Xiang, Z.3
He, Y.4
-
92
-
-
85017602076
-
Xiang Z. HINO: a BFO-aligned ontology representing human molecular interactions and pathways. arXiv
-
He Y, Xiang Z. HINO: a BFO-aligned ontology representing human molecular interactions and pathways. arXiv. 2013; arXiv:1311.3355.
-
2013; arXiv
, pp. 3355
-
-
He, Y.1
-
93
-
-
84978127960
-
The environment ontology: contextualising biological and biomedical entities
-
Buttigieg PL, Morrison N, Smith B, Mungall CJ, Lewis SE, Consortium E. The environment ontology: contextualising biological and biomedical entities. J Biomed Semant. 2013;4(1):43.
-
(2013)
J Biomed Semant
, vol.4
, Issue.1
, pp. 43
-
-
Buttigieg, P.L.1
Morrison, N.2
Smith, B.3
Mungall, C.J.4
Lewis, S.E.5
Consortium, E.6
-
94
-
-
77951973818
-
Modeling sample variables with an experimental factor ontology
-
COI: 1:CAS:528:DC%2BC3cXkvVOqs78%3D, PID: 20200009
-
Malone J, Holloway E, Adamusiak T, Kapushesky M, Zheng J, Kolesnikov N, et al. Modeling sample variables with an experimental factor ontology. Bioinformatics. 2010;26(8):1112–8.
-
(2010)
Bioinformatics
, vol.26
, Issue.8
, pp. 1112-1118
-
-
Malone, J.1
Holloway, E.2
Adamusiak, T.3
Kapushesky, M.4
Zheng, J.5
Kolesnikov, N.6
-
95
-
-
25444524604
-
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial “pan-genome
-
COI: 1:CAS:528:DC%2BD2MXhtVOqsbjL, PID: 16172379
-
Tettelin H, Masignani V, Cieslewicz MJ, Donati C, Medini D, Ward NL, et al. Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial “pan-genome”. Proc Natl Acad Sci U S A. 2005;102(39):13950–5.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, Issue.39
, pp. 13950-13955
-
-
Tettelin, H.1
Masignani, V.2
Cieslewicz, M.J.3
Donati, C.4
Medini, D.5
Ward, N.L.6
-
96
-
-
27444438599
-
The microbial pan-genome
-
COI: 1:CAS:528:DC%2BD2MXhtFyks7%2FI, PID: 16185861
-
Medini D, Donati C, Tettelin H, Masignani V, Rappuoli R. The microbial pan-genome. Curr Opin Genet Dev. 2005;15(6):589–94.
-
(2005)
Curr Opin Genet Dev
, vol.15
, Issue.6
, pp. 589-594
-
-
Medini, D.1
Donati, C.2
Tettelin, H.3
Masignani, V.4
Rappuoli, R.5
-
97
-
-
74049090046
-
Building the sequence map of the human pan-genome
-
COI: 1:CAS:528:DC%2BD1MXhsFaqtLrL, PID: 19997067
-
Li R, Li Y, Zheng H, Luo R, Zhu H, Li Q, et al. Building the sequence map of the human pan-genome. Nat Biotechnol. 2010;28(1):57–63.
-
(2010)
Nat Biotechnol
, vol.28
, Issue.1
, pp. 57-63
-
-
Li, R.1
Li, Y.2
Zheng, H.3
Luo, R.4
Zhu, H.5
Li, Q.6
-
98
-
-
0032943195
-
Grasping at molecular interactions and genetic networks in Drosophila melanogaster using FlyNets, an Internet database
-
COI: 1:CAS:528:DyaK1MXpsVGkuw%3D%3D, PID: 9847149
-
Sanchez C, Lachaize C, Janody F, Bellon B, Roder L, Euzenat J, et al. Grasping at molecular interactions and genetic networks in Drosophila melanogaster using FlyNets, an Internet database. Nucleic Acids Res. 1999;27(1):89–94.
-
(1999)
Nucleic Acids Res
, vol.27
, Issue.1
, pp. 89-94
-
-
Sanchez, C.1
Lachaize, C.2
Janody, F.3
Bellon, B.4
Roder, L.5
Euzenat, J.6
-
99
-
-
78650130580
-
Protein-protein interactions: interactome under construction
-
COI: 1:CAS:528:DC%2BC3cXhsFCjs7rN, PID: 21150998
-
Bonetta L. Protein-protein interactions: interactome under construction. Nature. 2010;468(7325):851–4.
-
(2010)
Nature
, vol.468
, Issue.7325
, pp. 851-854
-
-
Bonetta, L.1
-
100
-
-
84855872311
-
Bacterial interactomes: from interactions to networks
-
COI: 1:CAS:528:DC%2BC38XhslaitLzF, PID: 22144146
-
Bouveret E, Brun C. Bacterial interactomes: from interactions to networks. Methods Mol Biol. 2012;804:15–33.
-
(2012)
Methods Mol Biol
, vol.804
, pp. 15-33
-
-
Bouveret, E.1
Brun, C.2
-
101
-
-
0032482432
-
Collective dynamics of 'small-world' networks
-
COI: 1:CAS:528:DyaK1cXjs1Khsrk%3D, PID: 9623998
-
Watts DJ, Strogatz SH. Collective dynamics of 'small-world' networks. Nature. 1998;393(6684):440–2.
-
(1998)
Nature
, vol.393
, Issue.6684
, pp. 440-442
-
-
Watts, D.J.1
Strogatz, S.H.2
-
102
-
-
56549084695
-
Synchronization in complex networks
-
Arenas A, Diaz-Guilera A, Kurths J, Moreno Y, Zhou C. Synchronization in complex networks. Phys Rep. 2008;469:93–153.
-
(2008)
Phys Rep
, vol.469
, pp. 93-153
-
-
Arenas, A.1
Diaz-Guilera, A.2
Kurths, J.3
Moreno, Y.4
Zhou, C.5
-
104
-
-
79959988943
-
BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications
-
COI: 1:CAS:528:DC%2BC3MXosVOmsLw%3D, PID: 21672956
-
Whetzel PL, Noy NF, Shah NH, Alexander PR, Nyulas C, Tudorache T, et al. BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications. Nucleic Acids Res. 2011;39:W541–545.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. W541-W545
-
-
Whetzel, P.L.1
Noy, N.F.2
Shah, N.H.3
Alexander, P.R.4
Nyulas, C.5
Tudorache, T.6
-
105
-
-
77955155342
-
OntoFox: web-based support for ontology reuse
-
Xiang Z, Courtot M, Brinkman RR, Ruttenberg A, He Y. OntoFox: web-based support for ontology reuse. BMC Res Notes. 2010;3(175):1–12.
-
(2010)
BMC Res Notes
, vol.3
, Issue.175
, pp. 1-12
-
-
Xiang, Z.1
Courtot, M.2
Brinkman, R.R.3
Ruttenberg, A.4
He, Y.5
-
106
-
-
84899500332
-
Ontodog: a web-based ontology community view generation tool
-
COI: 1:CAS:528:DC%2BC2cXmvFCjtr8%3D, PID: 24413522
-
Zheng J, Xiang Z, Stoeckert Jr CJ, He Y. Ontodog: a web-based ontology community view generation tool. Bioinformatics. 2014;30(9):1340–2.
-
(2014)
Bioinformatics
, vol.30
, Issue.9
, pp. 1340-1342
-
-
Zheng, J.1
Xiang, Z.2
Stoeckert, C.J.3
He, Y.4
-
107
-
-
84938774642
-
Ontorat: automatic generation of new ontology terms, an-notations, and axioms based on ontology design patterns
-
Xiang Z, Zheng J, Lin Y, He Y. Ontorat: automatic generation of new ontology terms, an-notations, and axioms based on ontology design patterns. J Biomed Semant. 2015;6(1):4–10.
-
(2015)
J Biomed Semant
, vol.6
, Issue.1
, pp. 4-10
-
-
Xiang, Z.1
Zheng, J.2
Lin, Y.3
He, Y.4
-
108
-
-
85017622450
-
IDO extensions alignment using Ontobeep. In: Infectious Disease Ontology (IDO) Workshop
-
Baltimore, MD: USA
-
Xiang Z, He Y. IDO extensions alignment using Ontobeep. In: Infectious Disease Ontology (IDO) Workshop 2010: December 8–9; Baltimore, MD, USA. 2010.
-
(2010)
December 8–9
, pp. 2010
-
-
Xiang, Z.1
He, Y.2
|