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Volumn 113, Issue 40, 2016, Pages 11306-11311

Mutational landscape, clonal evolution patterns, and role of RAS mutations in relapsed acute lymphoblastic leukemia

(25)  Oshima, Koichi a   Khiabanian, Hossein a,b   Da Silva Almeida, Ana C a   Tzoneva, Gannie a   Abate, Francesco a   Ambesi Impiombato, Alberto a   Sanchez Martin, Marta a   Carpenter, Zachary a   Penson, Alex a   Perez Garcia, Arianne a   Eckert, Cornelia c,d   Nicolas, Concepción e   Balbin, Milagros f   Sulis, Maria Luisa g   Kato, Motohiro h   Koh, Katsuyoshi h   Paganin, Maddalena i   Basso, Giuseppe i   Gastier Foster, Julie M j,k,l   Devidas, Meenakshi m   more..


Author keywords

Acute lymphoblastic leukemia; Chemotherapy resistance; Genome sequencing; Relapsed leukemia

Indexed keywords

1,4 DIAMINO 1,4 BIS(2 AMINOPHENYLTHIO) 2,3 DICYANOBUTADIENE; CD135 ANTIGEN; CYCLIC AMP RESPONSIVE ELEMENT BINDING PROTEIN BINDING PROTEIN; DNA; EPHRIN RECEPTOR A3; JANUS KINASE 1; JANUS KINASE 2; JANUS KINASE 3; METHOTREXATE; MITOGEN ACTIVATED PROTEIN KINASE; N (2,3 DIHYDROXYPROPOXY) 3,4 DIFLUORO 2 (2 FLUORO 4 IODOANILINO)BENZAMIDE; NOTCH1 RECEPTOR; PROTEIN P53; PROTEIN TYROSINE PHOSPHATASE SHP 2; TRANSCRIPTION FACTOR RUNX1; VINCRISTINE; WT1 PROTEIN;

EID: 84989813801     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1608420113     Document Type: Article
Times cited : (154)

References (48)
  • 2
    • 33747144031 scopus 로고    scopus 로고
    • Leukaemia incidence and survival in children and adolescents in Europe during 1978-1997. Report from the Automated Childhood Cancer Information System project
    • Coebergh JW, et al. (2006) Leukaemia incidence and survival in children and adolescents in Europe during 1978-1997. Report from the Automated Childhood Cancer Information System project. Eur J Cancer 42(13):2019-2036.
    • (2006) Eur J Cancer , vol.42 , Issue.13 , pp. 2019-2036
    • Coebergh, J.W.1
  • 3
    • 84878341989 scopus 로고    scopus 로고
    • Acute lymphoblastic leukaemia
    • Inaba H, Greaves M, Mullighan CG (2013) Acute lymphoblastic leukaemia. Lancet 381(9881):1943-1955.
    • (2013) Lancet , vol.381 , Issue.9881 , pp. 1943-1955
    • Inaba, H.1    Greaves, M.2    Mullighan, C.G.3
  • 5
    • 76749111534 scopus 로고    scopus 로고
    • Long-term follow-up of the United Kingdom medical research council protocols for childhood acute lymphoblastic leukaemia, 1980-2001
    • Mitchell C, Richards S, Harrison CJ, Eden T (2010) Long-term follow-up of the United Kingdom medical research council protocols for childhood acute lymphoblastic leukaemia, 1980-2001. Leukemia 24(2):406-418.
    • (2010) Leukemia , vol.24 , Issue.2 , pp. 406-418
    • Mitchell, C.1    Richards, S.2    Harrison, C.J.3    Eden, T.4
  • 6
    • 30444437486 scopus 로고    scopus 로고
    • Treatment of acute lymphoblastic leukemia
    • Pui CH, Evans WE (2006) Treatment of acute lymphoblastic leukemia. N Engl J Med 354(2):166-178.
    • (2006) N Engl J Med , vol.354 , Issue.2 , pp. 166-178
    • Pui, C.H.1    Evans, W.E.2
  • 7
    • 84877000591 scopus 로고    scopus 로고
    • Relapsed childhood acute lymphoblastic leukaemia
    • Bhojwani D, Pui CH (2013) Relapsed childhood acute lymphoblastic leukaemia. Lancet Oncol 14(6):e205-e217.
    • (2013) Lancet Oncol , vol.14 , Issue.6 , pp. e205-e217
    • Bhojwani, D.1    Pui, C.H.2
  • 8
    • 0037606054 scopus 로고    scopus 로고
    • Detection, isolation, and stimulation of quiescent primitive leukemic progenitor cells from patients with acute myeloid leukemia (AML)
    • Guan Y, Gerhard B, Hogge DE (2003) Detection, isolation, and stimulation of quiescent primitive leukemic progenitor cells from patients with acute myeloid leukemia (AML). Blood 101(8):3142-3149.
    • (2003) Blood , vol.101 , Issue.8 , pp. 3142-3149
    • Guan, Y.1    Gerhard, B.2    Hogge, D.E.3
  • 9
    • 34147153377 scopus 로고    scopus 로고
    • Mesenchymal cells regulate the response of acute lymphoblastic leukemia cells to asparaginase
    • Iwamoto S, Mihara K, Downing JR, Pui CH, Campana D (2007) Mesenchymal cells regulate the response of acute lymphoblastic leukemia cells to asparaginase. J Clin Invest 117(4):1049-1057.
    • (2007) J Clin Invest , vol.117 , Issue.4 , pp. 1049-1057
    • Iwamoto, S.1    Mihara, K.2    Downing, J.R.3    Pui, C.H.4    Campana, D.5
  • 10
    • 84876094661 scopus 로고    scopus 로고
    • Wnt pathway contributes to the protection by bone marrow stromal cells of acute lymphoblastic leukemia cells and is a potential therapeutic target
    • Yang Y, et al. (2013) Wnt pathway contributes to the protection by bone marrow stromal cells of acute lymphoblastic leukemia cells and is a potential therapeutic target. Cancer Lett 333(1):9-17.
    • (2013) Cancer Lett , vol.333 , Issue.1 , pp. 9-17
    • Yang, Y.1
  • 11
    • 84875158235 scopus 로고    scopus 로고
    • Activating mutations in the NT5C2 nucleotidase gene drive chemotherapy resistance in relapsed ALL
    • Tzoneva G, et al. (2013) Activating mutations in the NT5C2 nucleotidase gene drive chemotherapy resistance in relapsed ALL. Nat Med 19(3):368-371.
    • (2013) Nat Med , vol.19 , Issue.3 , pp. 368-371
    • Tzoneva, G.1
  • 12
    • 84874663688 scopus 로고    scopus 로고
    • Relapse-specific mutations in NT5C2 in childhood acute lymphoblastic leukemia
    • Meyer JA, et al. (2013) Relapse-specific mutations in NT5C2 in childhood acute lymphoblastic leukemia. Nat Genet 45(3):290-294.
    • (2013) Nat Genet , vol.45 , Issue.3 , pp. 290-294
    • Meyer, J.A.1
  • 13
    • 0029075026 scopus 로고
    • Amplification of the dihydrofolate reductase gene is a mechanism of acquired resistance to methotrexate in patients with acute lymphoblastic leukemia and is correlated with p53 gene mutations
    • Göker E, et al. (1995) Amplification of the dihydrofolate reductase gene is a mechanism of acquired resistance to methotrexate in patients with acute lymphoblastic leukemia and is correlated with p53 gene mutations. Blood 86(2):677-684.
    • (1995) Blood , vol.86 , Issue.2 , pp. 677-684
    • Göker, E.1
  • 14
    • 0028295419 scopus 로고
    • Nonhereditary p53 mutations in T-cell acute lymphoblastic leukemia are associated with the relapse phase
    • Hsiao MH, Yu AL, Yeargin J, Ku D, Haas M (1994) Nonhereditary p53 mutations in T-cell acute lymphoblastic leukemia are associated with the relapse phase. Blood 83(10):2922-2930.
    • (1994) Blood , vol.83 , Issue.10 , pp. 2922-2930
    • Hsiao, M.H.1    Yu, A.L.2    Yeargin, J.3    Ku, D.4    Haas, M.5
  • 15
    • 79953090054 scopus 로고    scopus 로고
    • ETV6/RUNX1-positive relapses evolve from an ancestral clone and frequently acquire deletions of genes implicated in glucocorticoid signaling
    • Kuster L, et al. (2011) ETV6/RUNX1-positive relapses evolve from an ancestral clone and frequently acquire deletions of genes implicated in glucocorticoid signaling. Blood 117(9):2658-2667.
    • (2011) Blood , vol.117 , Issue.9 , pp. 2658-2667
    • Kuster, L.1
  • 16
    • 79952381408 scopus 로고    scopus 로고
    • CREBBP mutations in relapsed acute lymphoblastic leukaemia
    • Mullighan CG, et al. (2011) CREBBP mutations in relapsed acute lymphoblastic leukaemia. Nature 471(7337):235-239.
    • (2011) Nature , vol.471 , Issue.7337 , pp. 235-239
    • Mullighan, C.G.1
  • 17
    • 84907418637 scopus 로고    scopus 로고
    • Mutations in epigenetic regulators including SETD2 are gained during relapse in paediatric acute lymphoblastic leukaemia
    • Mar BG, et al. (2014) Mutations in epigenetic regulators including SETD2 are gained during relapse in paediatric acute lymphoblastic leukaemia. Nat Commun 5:3469.
    • (2014) Nat Commun , vol.5 , pp. 3469
    • Mar, B.G.1
  • 18
    • 84925235093 scopus 로고    scopus 로고
    • Rise and fall of subclones from diagnosis to relapse in pediatric B-acute lymphoblastic leukaemia
    • Ma X, et al. (2015) Rise and fall of subclones from diagnosis to relapse in pediatric B-acute lymphoblastic leukaemia. Nat Commun 6:6604.
    • (2015) Nat Commun , vol.6 , pp. 6604
    • Ma, X.1
  • 20
    • 84867145464 scopus 로고    scopus 로고
    • Molecular genetics of B-precursor acute lymphoblastic leukemia
    • Mullighan CG (2012) Molecular genetics of B-precursor acute lymphoblastic leukemia. J Clin Invest 122(10):3407-3415.
    • (2012) J Clin Invest , vol.122 , Issue.10 , pp. 3407-3415
    • Mullighan, C.G.1
  • 21
    • 5044225888 scopus 로고    scopus 로고
    • Activating mutations of NOTCH1 in human T cell acute lymphoblastic leukemia
    • Weng AP, et al. (2004) Activating mutations of NOTCH1 in human T cell acute lymphoblastic leukemia. Science 306(5694):269-271.
    • (2004) Science , vol.306 , Issue.5694 , pp. 269-271
    • Weng, A.P.1
  • 22
    • 34547820257 scopus 로고    scopus 로고
    • The SCFFBW7 ubiquitin ligase complex as a tumor suppressor in T cell leukemia
    • Thompson BJ, et al. (2007) The SCFFBW7 ubiquitin ligase complex as a tumor suppressor in T cell leukemia. J Exp Med 204(8):1825-1835.
    • (2007) J Exp Med , vol.204 , Issue.8 , pp. 1825-1835
    • Thompson, B.J.1
  • 23
    • 77950299929 scopus 로고    scopus 로고
    • PHF6 mutations in T-cell acute lymphoblastic leukemia
    • Van Vlierberghe P, et al. (2010) PHF6 mutations in T-cell acute lymphoblastic leukemia. Nat Genet 42(4):338-342.
    • (2010) Nat Genet , vol.42 , Issue.4 , pp. 338-342
    • Van Vlierberghe, P.1
  • 24
    • 70349232830 scopus 로고    scopus 로고
    • WT1 mutations in T-ALL
    • Tosello V, et al. (2009) WT1 mutations in T-ALL. Blood 114(5):1038-1045.
    • (2009) Blood , vol.114 , Issue.5 , pp. 1038-1045
    • Tosello, V.1
  • 25
    • 84862776920 scopus 로고    scopus 로고
    • Reverse engineering of TLX oncogenic transcriptional networks identifies RUNX1 as tumor suppressor in T-ALL
    • Della Gatta G, et al. (2012) Reverse engineering of TLX oncogenic transcriptional networks identifies RUNX1 as tumor suppressor in T-ALL. Nat Med 18(3):436-440.
    • (2012) Nat Med , vol.18 , Issue.3 , pp. 436-440
    • Della Gatta, G.1
  • 26
    • 84873084751 scopus 로고    scopus 로고
    • Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia
    • De Keersmaecker K, et al. (2013) Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia. Nat Genet 45(2):186-190.
    • (2013) Nat Genet , vol.45 , Issue.2 , pp. 186-190
    • De Keersmaecker, K.1
  • 27
    • 84862907593 scopus 로고    scopus 로고
    • The genetic basis of early T-cell precursor acute lymphoblastic leukaemia
    • Zhang J, et al. (2012) The genetic basis of early T-cell precursor acute lymphoblastic leukaemia. Nature 481(7380):157-163.
    • (2012) Nature , vol.481 , Issue.7380 , pp. 157-163
    • Zhang, J.1
  • 28
    • 84903170709 scopus 로고    scopus 로고
    • Twin infant with lymphatic dysplasia diagnosed with Noonan syndrome by molecular genetic testing
    • Mathur D, Somashekar S, Navarrete C, Rodriguez MM (2014) Twin infant with lymphatic dysplasia diagnosed with Noonan syndrome by molecular genetic testing. Fetal Pediatr Pathol 33(4):253-257.
    • (2014) Fetal Pediatr Pathol , vol.33 , Issue.4 , pp. 253-257
    • Mathur, D.1    Somashekar, S.2    Navarrete, C.3    Rodriguez, M.M.4
  • 29
    • 31544452561 scopus 로고    scopus 로고
    • Diversity and functional consequences of germline and somatic PTPN11 mutations in human disease
    • Tartaglia M, et al. (2006) Diversity and functional consequences of germline and somatic PTPN11 mutations in human disease. Am J Hum Genet 78(2):279-290.
    • (2006) Am J Hum Genet , vol.78 , Issue.2 , pp. 279-290
    • Tartaglia, M.1
  • 30
    • 84914106704 scopus 로고    scopus 로고
    • Ras pathway mutations are prevalent in relapsed childhood acute lymphoblastic leukemia and confer sensitivity to MEK inhibition
    • Irving J, et al. (2014) Ras pathway mutations are prevalent in relapsed childhood acute lymphoblastic leukemia and confer sensitivity to MEK inhibition. Blood 124(23):3420-3430.
    • (2014) Blood , vol.124 , Issue.23 , pp. 3420-3430
    • Irving, J.1
  • 31
    • 84938983358 scopus 로고    scopus 로고
    • KRAS and CREBBP mutations: A relapse-linked malicious liaison in childhood high hyperdiploid acute lymphoblastic leukemia
    • Malinowska-Ozdowy K, et al. (2015) KRAS and CREBBP mutations: A relapse-linked malicious liaison in childhood high hyperdiploid acute lymphoblastic leukemia. Leukemia 29(8):1656-1667.
    • (2015) Leukemia , vol.29 , Issue.8 , pp. 1656-1667
    • Malinowska-Ozdowy, K.1
  • 32
    • 0029942842 scopus 로고    scopus 로고
    • Exclusive development of T cell neoplasms in mice transplanted with bone marrow expressing activated Notch alleles
    • Pear WS, et al. (1996) Exclusive development of T cell neoplasms in mice transplanted with bone marrow expressing activated Notch alleles. J Exp Med 183(5):2283-2291.
    • (1996) J Exp Med , vol.183 , Issue.5 , pp. 2283-2291
    • Pear, W.S.1
  • 33
    • 84942307392 scopus 로고    scopus 로고
    • MEK1 and MEK2 inhibitors and cancer therapy: The long and winding road
    • Caunt CJ, Sale MJ, Smith PD, Cook SJ (2015) MEK1 and MEK2 inhibitors and cancer therapy: The long and winding road. Nat Rev Cancer 15(10):577-592.
    • (2015) Nat Rev Cancer , vol.15 , Issue.10 , pp. 577-592
    • Caunt, C.J.1    Sale, M.J.2    Smith, P.D.3    Cook, S.J.4
  • 34
    • 0037322744 scopus 로고    scopus 로고
    • Active cyclin B1-Cdk1 first appears on centrosomes in prophase
    • Jackman M, Lindon C, Nigg EA, Pines J (2003) Active cyclin B1-Cdk1 first appears on centrosomes in prophase. Nat Cell Biol 5(2):143-148.
    • (2003) Nat Cell Biol , vol.5 , Issue.2 , pp. 143-148
    • Jackman, M.1    Lindon, C.2    Nigg, E.A.3    Pines, J.4
  • 35
    • 51349144633 scopus 로고    scopus 로고
    • Polo-like kinase-1 is activated by aurora A to promote checkpoint recovery
    • Macurek L, et al. (2008) Polo-like kinase-1 is activated by aurora A to promote checkpoint recovery. Nature 455(7209):119-123.
    • (2008) Nature , vol.455 , Issue.7209 , pp. 119-123
    • Macurek, L.1
  • 36
    • 4444321565 scopus 로고    scopus 로고
    • Polo-like kinase-1 controls recovery from a G2 DNA damage-induced arrest in mammalian cells
    • van Vugt MA, Brás A, Medema RH (2004) Polo-like kinase-1 controls recovery from a G2 DNA damage-induced arrest in mammalian cells. Mol Cell 15(5):799-811.
    • (2004) Mol Cell , vol.15 , Issue.5 , pp. 799-811
    • Van Vugt, M.A.1    Brás, A.2    Medema, R.H.3
  • 37
    • 3543054544 scopus 로고    scopus 로고
    • Gene-expression patterns in drug-resistant acute lymphoblastic leukemia cells and response to treatment
    • Holleman A, et al. (2004) Gene-expression patterns in drug-resistant acute lymphoblastic leukemia cells and response to treatment. N Engl J Med 351(6):533-542.
    • (2004) N Engl J Med , vol.351 , Issue.6 , pp. 533-542
    • Holleman, A.1
  • 38
    • 84895803000 scopus 로고    scopus 로고
    • RAG-mediated recombination is the predominant driver of oncogenic rearrangement in ETV6-RUNX1 acute lymphoblastic leukemia
    • Papaemmanuil E, et al. (2014) RAG-mediated recombination is the predominant driver of oncogenic rearrangement in ETV6-RUNX1 acute lymphoblastic leukemia. Nat Genet 46(2):116-125.
    • (2014) Nat Genet , vol.46 , Issue.2 , pp. 116-125
    • Papaemmanuil, E.1
  • 39
    • 84856158823 scopus 로고    scopus 로고
    • The curious chemical biology of cytosine: Deamination, methylation, and oxidation as modulators of genomic potential
    • Nabel CS, Manning SA, Kohli RM (2012) The curious chemical biology of cytosine: Deamination, methylation, and oxidation as modulators of genomic potential. ACS Chem Biol 7(1):20-30.
    • (2012) ACS Chem Biol , vol.7 , Issue.1 , pp. 20-30
    • Nabel, C.S.1    Manning, S.A.2    Kohli, R.M.3
  • 40
    • 54549094903 scopus 로고    scopus 로고
    • Somatic mutations affect key pathways in lung adenocarcinoma
    • Ding L, et al. (2008) Somatic mutations affect key pathways in lung adenocarcinoma. Nature 455(7216):1069-1075.
    • (2008) Nature , vol.455 , Issue.7216 , pp. 1069-1075
    • Ding, L.1
  • 41
    • 84862776906 scopus 로고    scopus 로고
    • Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing
    • Ding L, et al. (2012) Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing. Nature 481(7382):506-510.
    • (2012) Nature , vol.481 , Issue.7382 , pp. 506-510
    • Ding, L.1
  • 42
    • 57149118627 scopus 로고    scopus 로고
    • Genomic analysis of the clonal origins of relapsed acute lymphoblastic leukemia
    • Mullighan CG, et al. (2008) Genomic analysis of the clonal origins of relapsed acute lymphoblastic leukemia. Science 322(5906):1377-1380.
    • (2008) Science , vol.322 , Issue.5906 , pp. 1377-1380
    • Mullighan, C.G.1
  • 44
    • 84886541754 scopus 로고    scopus 로고
    • EXCAVATOR: Detecting copy number variants from whole-exome sequencing data
    • Magi A, et al. (2013) EXCAVATOR: Detecting copy number variants from whole-exome sequencing data. Genome Biol 14(10):R120.
    • (2013) Genome Biol , vol.14 , Issue.10 , pp. R120
    • Magi, A.1
  • 45
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25(14):1754-1760.
    • (2009) Bioinformatics , vol.25 , Issue.14 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 46
    • 84874025843 scopus 로고    scopus 로고
    • Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
    • Cibulskis K, et al. (2013) Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat Biotechnol 31(3):213-219.
    • (2013) Nat Biotechnol , vol.31 , Issue.3 , pp. 213-219
    • Cibulskis, K.1
  • 47
    • 84864153492 scopus 로고    scopus 로고
    • Strelka: Accurate somatic small-variant calling from sequenced tumor-normal sample pairs
    • Saunders CT, et al. (2012) Strelka: Accurate somatic small-variant calling from sequenced tumor-normal sample pairs. Bioinformatics 28(14):1811-1817.
    • (2012) Bioinformatics , vol.28 , Issue.14 , pp. 1811-1817
    • Saunders, C.T.1
  • 48
    • 84862506964 scopus 로고    scopus 로고
    • A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3
    • Cingolani P, et al. (2012) A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3. Fly (Austin) 6(2):80-92.
    • (2012) Fly (Austin) , vol.6 , Issue.2 , pp. 80-92
    • Cingolani, P.1


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