메뉴 건너뛰기




Volumn 141, Issue , 2016, Pages 556-572

Incorporating outlier detection and replacement into a non-parametric framework for movement and distortion correction of diffusion MR images

Author keywords

Diffusion; Movement; Outlier; Registration; Signal loss

Indexed keywords

ALGORITHM; ARTICLE; BODY MOVEMENT; BRAIN REGION; BRAIN SLICE; DIAGNOSTIC ERROR; DIAGNOSTIC VALUE; DIFFUSION TENSOR IMAGING; DIFFUSION WEIGHTED IMAGING; EDDY COVARIANCE; FALSE NEGATIVE RESULT; FALSE POSITIVE RESULT; FRACTIONAL ANISOTROPY; HUMAN; IMAGE ANALYSIS; IMAGE PROCESSING; JOINT FUNCTION; MEAN DIFFUSIVITY; NEUROIMAGING; NONPARAMETRIC TEST; NUCLEAR MAGNETIC RESONANCE SCANNER; PREDICTION; PRIORITY JOURNAL; RADIOLOGICAL PARAMETERS; SENSITIVITY AND SPECIFICITY; SIGNAL DETECTION; SIMULATION; ANATOMY AND HISTOLOGY; ARTIFACT; AUTOMATED PATTERN RECOGNITION; BRAIN; COMPUTER ASSISTED DIAGNOSIS; EVALUATION STUDY; IMAGE ENHANCEMENT; MOTION; PROCEDURES; REPRODUCIBILITY;

EID: 84983517709     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2016.06.058     Document Type: Article
Times cited : (491)

References (57)
  • 1
    • 0028030441 scopus 로고
    • Analysis and correction of motion artifacts in diffusion weighted imaging
    • Anderson, A.W., Gore, J.C., Analysis and correction of motion artifacts in diffusion weighted imaging. Magn. Reson. Med. 32 (1994), 379–387.
    • (1994) Magn. Reson. Med. , vol.32 , pp. 379-387
    • Anderson, A.W.1    Gore, J.C.2
  • 3
    • 84874414818 scopus 로고    scopus 로고
    • Chapter 17: image distortion and its correction in diffusion MRI
    • D.K. Jones Oxford University Press Oxford, United Kingdom
    • Andersson, J.L.R., Skare, S., Chapter 17: image distortion and its correction in diffusion MRI. Jones, D.K., (eds.) Diffusion MRI: Theory, Methods, and Applications, 2011, Oxford University Press, Oxford, United Kingdom, 285–302.
    • (2011) Diffusion MRI: Theory, Methods, and Applications , pp. 285-302
    • Andersson, J.L.R.1    Skare, S.2
  • 4
    • 84939633194 scopus 로고    scopus 로고
    • Non-parametric representation and prediction of single- and multi-shell diffusion-weighted MRI data using Gaussian processes
    • Andersson, J.L.R., Sotiropoulos, S.N., Non-parametric representation and prediction of single- and multi-shell diffusion-weighted MRI data using Gaussian processes. NeuroImage 122 (2015), 166–176, 10.1016/j.neuroimage.2015.07.067.
    • (2015) NeuroImage , vol.122 , pp. 166-176
    • Andersson, J.L.R.1    Sotiropoulos, S.N.2
  • 5
    • 84941292221 scopus 로고    scopus 로고
    • An integrated approach to correction for off-resonance effects and subject movement in diffusion MR imaging
    • Andersson, J.L.R., Sotiropoulos, S.N., An integrated approach to correction for off-resonance effects and subject movement in diffusion MR imaging. NeuroImage 125 (2016), 1063–1078, 10.1016/j.neuroimage.2015.10.019.
    • (2016) NeuroImage , vol.125 , pp. 1063-1078
    • Andersson, J.L.R.1    Sotiropoulos, S.N.2
  • 6
    • 0033922197 scopus 로고    scopus 로고
    • Sampling and reconstruction effects due to motion in diffusion-weighted interleaved echo planar imaging
    • Atkinson, D., Porter, D.A., Hill, D.L.G., Calamante, F., Connely, A., Sampling and reconstruction effects due to motion in diffusion-weighted interleaved echo planar imaging. Magn. Reson. Med. 44 (2000), 101–109.
    • (2000) Magn. Reson. Med. , vol.44 , pp. 101-109
    • Atkinson, D.1    Porter, D.A.2    Hill, D.L.G.3    Calamante, F.4    Connely, A.5
  • 8
    • 18244400115 scopus 로고    scopus 로고
    • RESTORE: robust estimation of tensors by outlier rejection
    • Chang, L.-C., Jones, D.K., Pierpaoli, C., RESTORE: robust estimation of tensors by outlier rejection. Magn. Reson. Med. 53 (2005), 1088–1095.
    • (2005) Magn. Reson. Med. , vol.53 , pp. 1088-1095
    • Chang, L.-C.1    Jones, D.K.2    Pierpaoli, C.3
  • 9
    • 84865661488 scopus 로고    scopus 로고
    • Informed RESTORE: a method for robust estimation of diffusion tensor from low redundancy datasets in the presence of physiological noise artifacts
    • Chang, L.-C., Walker, L., Pierpaoli, C., Informed RESTORE: a method for robust estimation of diffusion tensor from low redundancy datasets in the presence of physiological noise artifacts. Magn. Reson. Med. 68:5 (2012), 1654–1663.
    • (2012) Magn. Reson. Med. , vol.68 , Issue.5 , pp. 1654-1663
    • Chang, L.-C.1    Walker, L.2    Pierpaoli, C.3
  • 10
    • 84929649876 scopus 로고    scopus 로고
    • Iterative reweighted linear least squares for accurate, fast, and robust estimation of diffusion magnetic resonance parameters
    • Collier, Q., Veraart, J., Jeurissen, B., den Dekker, A.J., Sijbers, J., Iterative reweighted linear least squares for accurate, fast, and robust estimation of diffusion magnetic resonance parameters. Magn. Reson. Med. 73:6 (2015), 2174–2184.
    • (2015) Magn. Reson. Med. , vol.73 , Issue.6 , pp. 2174-2184
    • Collier, Q.1    Veraart, J.2    Jeurissen, B.3    den Dekker, A.J.4    Sijbers, J.5
  • 12
    • 33746773014 scopus 로고    scopus 로고
    • Development of a functional magnetic resonance imaging simulator for modeling realistic rigid-body motion artifacts
    • Drobnjak, I., Gavaghan, D., Süli, E., Pitt-Francis, J., Jenkinson, M., Development of a functional magnetic resonance imaging simulator for modeling realistic rigid-body motion artifacts. Magn. Reson. Med. 56 (2006), 364–380.
    • (2006) Magn. Reson. Med. , vol.56 , pp. 364-380
    • Drobnjak, I.1    Gavaghan, D.2    Süli, E.3    Pitt-Francis, J.4    Jenkinson, M.5
  • 13
    • 77955414952 scopus 로고    scopus 로고
    • Simulating the effects of time-varying magnetic fields with a realistic simulated scanner
    • Drobnjak, I., Pell, G.S., Jenkinson, M., Simulating the effects of time-varying magnetic fields with a realistic simulated scanner. Magn. Reson. Imaging 28 (2010), 1014–1021.
    • (2010) Magn. Reson. Imaging , vol.28 , pp. 1014-1021
    • Drobnjak, I.1    Pell, G.S.2    Jenkinson, M.3
  • 15
    • 84947484050 scopus 로고    scopus 로고
    • Realistic simulation of artefacts in diffusion MRI for validating post-processing correction techniques
    • Graham, M.S., Drobnjak, I., Zhang, H., Realistic simulation of artefacts in diffusion MRI for validating post-processing correction techniques. NeuroImage 125 (2016), 1079–1094, 10.1016/j.neuroimage.2015.11.006.
    • (2016) NeuroImage , vol.125 , pp. 1079-1094
    • Graham, M.S.1    Drobnjak, I.2    Zhang, H.3
  • 16
    • 84857013169 scopus 로고    scopus 로고
    • k-Space and q-space: combining ultra-high spatial and angular resolution in diffusion imaging using ZOOPPA at 7 T
    • Heidemann, R.M., Anwander, A., Feiweier, T., Knösche, T.R., Turner, R., k-Space and q-space: combining ultra-high spatial and angular resolution in diffusion imaging using ZOOPPA at 7 T. NeuroImage 60 (2012), 967–978.
    • (2012) NeuroImage , vol.60 , pp. 967-978
    • Heidemann, R.M.1    Anwander, A.2    Feiweier, T.3    Knösche, T.R.4    Turner, R.5
  • 17
    • 84983518733 scopus 로고    scopus 로고
    • Diffusion MRI: From Quantitative Measurement to In-vivo Neuroanatomy
    • Academic Press, Elsevier London, United Kingdom
    • 2014 H., Johansen-Berg, T. E. J., Behrens, Diffusion MRI: From Quantitative Measurement to In-vivo Neuroanatomy. 2014, Academic Press, Elsevier, London, United Kingdom.
    • (2014)
    • H., J.-B.1    T. E. J., B.2
  • 18
    • 0037227848 scopus 로고    scopus 로고
    • Determining and visualizing uncertainty in estimates of fiber orientation from diffusion tensor MRI
    • Jones, D.K., Determining and visualizing uncertainty in estimates of fiber orientation from diffusion tensor MRI. Magn. Reson. Med. 49:1 (2003), 7–12.
    • (2003) Magn. Reson. Med. , vol.49 , Issue.1 , pp. 7-12
    • Jones, D.K.1
  • 20
    • 7544247899 scopus 로고    scopus 로고
    • “Squashing peanuts and smashing pumpkins”: how noise distorts diffusion-weighted MR data
    • Jones, D.K., Basser, P.J., “Squashing peanuts and smashing pumpkins”: how noise distorts diffusion-weighted MR data. Magn. Reson. Med. 52 (2004), 979–993.
    • (2004) Magn. Reson. Med. , vol.52 , pp. 979-993
    • Jones, D.K.1    Basser, P.J.2
  • 21
    • 0032835247 scopus 로고    scopus 로고
    • Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging
    • Jones, D.K., Horsfield, M.A., Simmons, A., Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging. Magn. Reson. Med. 42 (1999), 515–525.
    • (1999) Magn. Reson. Med. , vol.42 , pp. 515-525
    • Jones, D.K.1    Horsfield, M.A.2    Simmons, A.3
  • 22
    • 0032900418 scopus 로고    scopus 로고
    • Motion correction in fMRI via registration of individual slices into an anatomical volume
    • Kim, B., Boes, J.L., Bland, P.H., Chenevert, T.L., Meyer, C.R., Motion correction in fMRI via registration of individual slices into an anatomical volume. Magn. Reson. Med. 41 (1999), 964–972.
    • (1999) Magn. Reson. Med. , vol.41 , pp. 964-972
    • Kim, B.1    Boes, J.L.2    Bland, P.H.3    Chenevert, T.L.4    Meyer, C.R.5
  • 25
    • 0036754787 scopus 로고    scopus 로고
    • Distortion correction and robust tensor estimation for MR diffusion imaging
    • Mangin, J.-F., Poupon, C., Clark, C., Le Bihan, D., Bloch, I., Distortion correction and robust tensor estimation for MR diffusion imaging. Med. Image Anal. 6:3 (2002), 191–198.
    • (2002) Med. Image Anal. , vol.6 , Issue.3 , pp. 191-198
    • Mangin, J.-F.1    Poupon, C.2    Clark, C.3    Le Bihan, D.4    Bloch, I.5
  • 26
    • 77955292827 scopus 로고    scopus 로고
    • Multiband multislice GE-EPI at 7 tesla, with 16-fold acceleration using partial parallel imaging with application to high spatial and temporal whole-brain fMRI
    • Moeller, S., Yacoub, E., Olman, C.A., Auerbach, E., Strupp, J., Harel, N., Ugurbil, K., Multiband multislice GE-EPI at 7 tesla, with 16-fold acceleration using partial parallel imaging with application to high spatial and temporal whole-brain fMRI. Magn. Reson. Med. 63:5 (2010), 1144–1153.
    • (2010) Magn. Reson. Med. , vol.63 , Issue.5 , pp. 1144-1153
    • Moeller, S.1    Yacoub, E.2    Olman, C.A.3    Auerbach, E.4    Strupp, J.5    Harel, N.6    Ugurbil, K.7
  • 27
    • 84881137953 scopus 로고    scopus 로고
    • Retrospective correction of physiological noise in DTI using an extended tensor model and peripheral measurements
    • Mohammadi, S., Hutton, C., Nagy, Z., Josephs, O., Weiskopf, N., Retrospective correction of physiological noise in DTI using an extended tensor model and peripheral measurements. Magn. Reson. Med. 70 (2013), 358–369.
    • (2013) Magn. Reson. Med. , vol.70 , pp. 358-369
    • Mohammadi, S.1    Hutton, C.2    Nagy, Z.3    Josephs, O.4    Weiskopf, N.5
  • 29
    • 0035081921 scopus 로고    scopus 로고
    • Implications of bulk motion for diffusion-weighted imaging experiments: effects, mechanisms, and solutions
    • Norris, D.G., Implications of bulk motion for diffusion-weighted imaging experiments: effects, mechanisms, and solutions. J. Magn. Reson. Imaging 13 (2001), 486–495.
    • (2001) J. Magn. Reson. Imaging , vol.13 , pp. 486-495
    • Norris, D.G.1
  • 30
    • 25144471800 scopus 로고    scopus 로고
    • Investigations on the efficiency of cardiac-gated methods for the acquisition of diffusion-weighted images
    • Nunes, R.G., Jezzard, P., Clare, S., Investigations on the efficiency of cardiac-gated methods for the acquisition of diffusion-weighted images. J. Magn. Reson. 177 (2005), 102–110.
    • (2005) J. Magn. Reson. , vol.177 , pp. 102-110
    • Nunes, R.G.1    Jezzard, P.2    Clare, S.3
  • 32
    • 84865514194 scopus 로고    scopus 로고
    • HOMOR: higher order model outlier rejection for high b-value MR diffusion data
    • Pannek, K., Raffelt, D., Bell, C., Mathias, J.L., Rose, S.E., HOMOR: higher order model outlier rejection for high b-value MR diffusion data. NeuroImage 63 (2012), 835–842.
    • (2012) NeuroImage , vol.63 , pp. 835-842
    • Pannek, K.1    Raffelt, D.2    Bell, C.3    Mathias, J.L.4    Rose, S.E.5
  • 34
    • 81355157205 scopus 로고    scopus 로고
    • Chapter 18: artifacts in diffusion MRI
    • D.K. Jones Oxford University Press Oxford, United Kingdom
    • Pierpaoli, C., Chapter 18: artifacts in diffusion MRI. Jones, D.K., (eds.) Diffusion MRI: Theory, Methods, and Applications, 2011, Oxford University Press, Oxford, United Kingdom, 303–318.
    • (2011) Diffusion MRI: Theory, Methods, and Applications , pp. 303-318
    • Pierpaoli, C.1
  • 36
    • 84930652853 scopus 로고    scopus 로고
    • Connectivity-based fixel enhancement: whole-brain statistical analysis of diffusion MRI measures in the presence of crossing fibres
    • Raffelt, D.A., Smith, R.E., Ridgway, G.R., Tournier, J.-D., Vaughan, D.N., Rose, S., Henderson, R., Connelly, A., Connectivity-based fixel enhancement: whole-brain statistical analysis of diffusion MRI measures in the presence of crossing fibres. NeuroImage 117 (2015), 40–55.
    • (2015) NeuroImage , vol.117 , pp. 40-55
    • Raffelt, D.A.1    Smith, R.E.2    Ridgway, G.R.3    Tournier, J.-D.4    Vaughan, D.N.5    Rose, S.6    Henderson, R.7    Connelly, A.8
  • 37
    • 25444448065 scopus 로고    scopus 로고
    • Gaussian Processes for Machine Learning
    • The MIT Press Cambridge, Massachusetts
    • Rasmussen, C.E., Williams, C.K.I., Gaussian Processes for Machine Learning. 2006, The MIT Press, Cambridge, Massachusetts.
    • (2006)
    • Rasmussen, C.E.1    Williams, C.K.I.2
  • 38
    • 84859705233 scopus 로고    scopus 로고
    • Blipped-controlled aliasing in parallel imaging for simultaneous multislice echo planar imaging with reduced g-factor penalty
    • Setsompop, K., Gagoski, B.A., Polimeni, J.R., Witzel, T., Wedeen, V.J., Wald, L.L., Blipped-controlled aliasing in parallel imaging for simultaneous multislice echo planar imaging with reduced g-factor penalty. Magn. Reson. Med. 67:5 (2012), 1210–1224.
    • (2012) Magn. Reson. Med. , vol.67 , Issue.5 , pp. 1210-1224
    • Setsompop, K.1    Gagoski, B.A.2    Polimeni, J.R.3    Witzel, T.4    Wedeen, V.J.5    Wald, L.L.6
  • 40
    • 0035488291 scopus 로고    scopus 로고
    • On the effects of gating in diffusion imaging of the brain using single shot EPI
    • Skare, S., Andersson, J.L.R., On the effects of gating in diffusion imaging of the brain using single shot EPI. Magn. Reson. Imaging 19 (2001), 1125–1128.
    • (2001) Magn. Reson. Imaging , vol.19 , pp. 1125-1128
    • Skare, S.1    Andersson, J.L.R.2
  • 46
    • 0030278692 scopus 로고    scopus 로고
    • Analysis and comparison of motion-correction techniques in diffusion-weighted imaging
    • Trouard, T.P., Sabharwal, Y., Altbach, M.I., Gmitro, A.F., Analysis and comparison of motion-correction techniques in diffusion-weighted imaging. J. Magn. Reson. Imaging 6 (1996), 925–935.
    • (1996) J. Magn. Reson. Imaging , vol.6 , pp. 925-935
    • Trouard, T.P.1    Sabharwal, Y.2    Altbach, M.I.3    Gmitro, A.F.4
  • 50
    • 85041153684 scopus 로고    scopus 로고
    • Multivariate Geostatistics: An Introduction With Applications
    • Springer-Verlag Berlin/Heidelberg
    • Wackernagel, H., Multivariate Geostatistics: An Introduction With Applications. 2003, Springer-Verlag, Berlin/Heidelberg.
    • (2003)
    • Wackernagel, H.1
  • 52
    • 0028306323 scopus 로고
    • MRI signal void due to in-plane motion is all-or-none
    • Wedeen, V.J., Weisskoff, R.M., Poncelet, B.P., MRI signal void due to in-plane motion is all-or-none. Magn. Reson. Med. 32:1 (1994), 116–120.
    • (1994) Magn. Reson. Med. , vol.32 , Issue.1 , pp. 116-120
    • Wedeen, V.J.1    Weisskoff, R.M.2    Poncelet, B.P.3
  • 54
    • 84892872124 scopus 로고    scopus 로고
    • Spurious group differences due to head motion in a diffusion MRI study
    • Yendiki, A., Koldewyn, K., Kakunoori, S., Kanwisher, N., Fischl, B., Spurious group differences due to head motion in a diffusion MRI study. NeuroImage 88 (2014), 79–90.
    • (2014) NeuroImage , vol.88 , pp. 79-90
    • Yendiki, A.1    Koldewyn, K.2    Kakunoori, S.3    Kanwisher, N.4    Fischl, B.5
  • 55
    • 44149096448 scopus 로고    scopus 로고
    • Structure-specific statistical mapping of white matter tracts
    • Yushkevich, P.A., Zhang, H., Simon, T.J., Gee, J.C., Structure-specific statistical mapping of white matter tracts. NeuroImage 41 (2008), 448–461.
    • (2008) NeuroImage , vol.41 , pp. 448-461
    • Yushkevich, P.A.1    Zhang, H.2    Simon, T.J.3    Gee, J.C.4
  • 56
    • 79451471148 scopus 로고    scopus 로고
    • Automated artifact detection and removal for improved tensor estimation in motion-corrupted DTI data sets using the combination of local binary patterns and 2D partial least squares
    • Zhou, Z., Liu, W., Cui, J., Wang, X., Arias, D., Wen, Y., Bansal, R., Hao, X., Wang, Z., Peterson, B.S., Xu, D., Automated artifact detection and removal for improved tensor estimation in motion-corrupted DTI data sets using the combination of local binary patterns and 2D partial least squares. Magn. Reson. Imaging 29 (2011), 230–242.
    • (2011) Magn. Reson. Imaging , vol.29 , pp. 230-242
    • Zhou, Z.1    Liu, W.2    Cui, J.3    Wang, X.4    Arias, D.5    Wen, Y.6    Bansal, R.7    Hao, X.8    Wang, Z.9    Peterson, B.S.10    Xu, D.11
  • 57
    • 77956060332 scopus 로고    scopus 로고
    • Patching cardiac and head motion artefacts in diffusion-weighted images
    • Zwiers, M.P., Patching cardiac and head motion artefacts in diffusion-weighted images. NeuroImage 53:2 (2010), 565–575.
    • (2010) NeuroImage , vol.53 , Issue.2 , pp. 565-575
    • Zwiers, M.P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.