Characterization and Propagation of Uncertainty in Diffusion-Weighted MR Imaging

Magnetic Resonance in Medicine

Volumn 50, Issue 5, 2003, Pages 1077-1088

  Behrens, Timothy E J ^a,b   Woolrich, M W ^a,b   Jenkinson, Mi ^a   Johansen Berg, H ^a   Nunes, R G ^a   Clare, S ^a   Matthews, P M ^a   Brady, J M ^b   Smith, S M ^a  

^a UNIVERSITY OF OXFORD   (United Kingdom)

^b UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

Diffusion weighted MRI; Probability density functions

Indexed keywords

DIFFUSION; MAGNETIC RESONANCE IMAGING; PARAMETER ESTIMATION; PROBABILITY;

CONNECTIVITY DISTRIBUTION; DIFFUSION TENSOR; DIFFUSION-WEIGHTED MRI; ESTIMATION OF PARAMETERS; GLOBAL CONNECTIVITY; NON-HUMAN PRIMATE; PROBABILISTIC FRAMEWORK; PROPAGATION OF UNCERTAINTIES;

PROBABILITY DENSITY FUNCTION;

ARTICLE; DIFFUSION; DIFFUSION WEIGHTED IMAGING; HUMAN; MATHEMATICAL MODEL; MEASUREMENT; NONHUMAN; PRIMATE; PROBABILITY; PROBABILITY DENSITY FUNCTION; THALAMOCORTICAL TRACT;

EID: 0242353936     PISSN: 07403194     EISSN: None     Source Type: Journal    
DOI: 10.1002/mrm.10609     Document Type: Article

References (40)

1. Basser P, Pierpaoli P. Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI. J Magn Reson B 1996;111:209-219.
2. Beaulieu C. The basis of anisotropic water diffusion in the nervous system - a technical review. NMR Biomed 2002;15:435-455.
3. Guo AC, MacFall JR, Provenzale JM. Multiple sclerosis: diffusion tensor MR imaging for evaluation of normal-appearing white matter. Radiology 2002;222:729-736.
4. Mori S, Crain B, Chacko V, Van Zijl P. Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging. Ann Neurol 1999;45:265-269.
5. Basser P, Pajevic S, Pierpaoli C, Duda J, Aldroubi A. In vivo fiber tractography using DT-MRI data. Magn Reson Med 2000;44:625-632.
6. Conturo T, Lori N, Cull T. Tracking neuronal fiber pathways in the living human brain. Proc Natl Acad Sci USA 1999;96:10422-10427.
7. Stieltjes B, Kaufmann WE, van Zijl PC, Fredericksen K, Pearlson GD, Solaiyappan M, Mori S. Diffusion tensor imaging and axonal tracking in the human brainstem. Neuroimage 2001;14:723-735.
8. Behrens TEJ, Johansen-Berg H, Woolrich MW, Smith SM, Wheeler-Kingshott CAM, Boulby PA, Barker GJ, Sillery EL, Sheehan K, Ciccarelli O, Thompson AJ, Brady JM, Matthews PM. Noninvasive mapping of connections between human thalamus and cortex using diffusion imaging. Nat Neurosci 2003;6:750-757.
9. Catani M, Howard RJ, Pajevic S, Jones DK. Virtual in vivo interactive dissection of white matter fasciculi in the human brain. Neuroimage 2002;17:77-94.
10. Basser PJ, Matiello J, Le Bihan D. Estimation of the effective self-diffusion tensor from the NMR spin echo. J Magn Reson B 1994;103:247-254.
11. th Annual Meeting of the ISMRM, Glasgow, 2001. p 502.
12. Gilks WR, Richardson S, Spiegelhalter GJ. Markov chain Monte Carlo in practice. London: Chapman and Hall; 1996.
13. Gamerman D. Markov chain Monte Carlo. London: Chapman and Hall; 1997.
14. Jones DK. Determining and visualizing uncertainty in estimates of fiber orientation from diffusion tensor MRI. Magn Reson Med 2003;49:7-12.
15. Pierpaoli P, Jezzard P. Diffusion tensor imaging of the human brain. Radiology 1996;201:637-648.
16. Basser PJ. New histological and physiological stains derived from diffusion tensor MR images. Ann NY Acad Sci 1997;820:123-138.
17. Reese TG, Heid O, Weisskoff RM, Wedeen VJ. Reduction of eddy-current-induced distortion in diffusion MRI using a twice-refocused spin echo. Magn Reson Med 2003;49:177-182.
18. Jones DK, Horsfield MA, Simmons A. Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging. Magn Reson Med 1999;42:515-525.
19. Mori S, Kauffman W. et al. In vivo visualisation of human neural pathways by magnetic resonance imaging. Ann Neurol 2000;47:412-414.
20. Mori S, Crain BJ, Chacko VP, van Zijl PC. Three-dimensional tracking of axonal projections in the brain by Magnetic Resonance Imaging. Ann Neurol 1999;45:265-269.
21. th Annual Meeting of the ISMRM, Honolulu. 2002. p 1118.
22. Guillery RW, Sherman SM. Thalamic relay functions and their role in corticocortical communication: generalizations from the visual system. Neuron 2002;33:163-175.
23. Jones EG. The thalamus. New York: Plenum Press; 1985.
24. Yarita H, Iino M, Tanabe T, Kogure S, Takagi SF. A transthalamic olfactory pathway to orbitofrontal cortex in the monkey. J Neurophysiol 1980;43:69-85.
25. Russchen FT, Amaral DG, Price JL. The afferent input to the magnocellular division of the mediodorsal thalamic nucleus in the monkey, Macaca fascicularis. J Comp Neurol 1987;256:175-210.
26. Markowitsch HJ, Emmans D, Irle E, Streicher M, Preilowski B. Cortical and subcortical afferent connections of the primate's temporal pole: a study of rhesus monkeys, squirrel monkeys, and marmosets. J Comp Neurol 1985;242:425-458.
27. Tobias TJ. Afferents to prefrontal cortex from the thalamic mediodorsal nucleus in the rhesus monkey. Brain Res 1975:83:191-212.
28. Tanaka Jr D. Thalamic projections of the dorsomedial prefrontal cortex in the rhesus monkey (Macaca mulatta). Brain Res 1976;110:21-38.
29. Jones EG, Wise SP, Coulter JD. Differential thalamic relationships of sensory-motor and parietal cortical fields in monkeys. J Comp Neurol 1979;183:833-881.
30. Asanuma C, Thach WT, Jones EG. Distribution of cerebellar terminations and their relation to other afferent terminations in the ventral lateral thalamic region of the monkey. Brain Res 1983;286:237-265.
31. Morel A, Magnin M, Jeanmonod D. Multiarchitectonic and stereotactic atlas of the human thalamus. J Comp Neurol 1997;387:588-630.
32. Smith SM, Zhang Y, Jenkinson M, Chen J, Matthews PM, Federico A, De Stefano N. Accurate, robust, and automated longitudinal and cross-sectional brain change analysis. Neuroimage 2002;17:479-489.
33. Jenkinson M, Smith S. A global optimisation method for robust affine registration of brain images. Med Image Anal 2001;5:143-156.
34. Jenkinson M, Bannister P, Brady M, Smith S. Improved optimization for the robust and accurate linear registration and motion correction of brain images. Neuroimage 2002;17:825-841.
35. Alexander DC, Barker GJ, Arridge SR. Detection and modeling of non-Gaussian apparent diffusion coefficient profiles in human brain data. Magn Reson Med 2002;48:331-340.
36. Frank LR. Characterization of anisotropy in high angular resolution diffusion-weighted MRI. Magn Reson Med 2002;47:1083-1099.
37. Pierpaoli P, Basser PJ. Toward a quantitative assessment of diffusion anisotropy. Magn Reson Med 1996;36:893-906.
38. th Annual Meeting of the ISMRM, Honolulu, 2002. p 1131.
39. th Annual Meeting of the ISMRM, Honolulu, 2002. p 1125.
40. th Annual Meeting of the ISMRM, Honolulu, 2002. p 1165.