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Volumn 11, Issue 1, 2016, Pages 184-191

Labeling of active proteases in fresh-frozen tissues by topical application of quenched activity-based probes

Author keywords

[No Author keywords available]

Indexed keywords

CATHEPSIN B; CATHEPSIN L; CATHEPSIN S; CATHEPSIN X; PROTEINASE; FLUORESCENT DYE; PEPTIDE HYDROLASE;

EID: 84979862414     PISSN: 17542189     EISSN: 17502799     Source Type: Journal    
DOI: 10.1038/nprot.2016.004     Document Type: Article
Times cited : (49)

References (40)
  • 1
    • 0141504062 scopus 로고    scopus 로고
    • Influence of condition of surgical margins on local recurrence and disease-specific survival in oral and oropharyngeal cancer
    • McMahon, J. et al. Influence of condition of surgical margins on local recurrence and disease-specific survival in oral and oropharyngeal cancer. Br. J. Oral Maxillofac. Surg. 41, 224-231 (2003).
    • (2003) Br. J. Oral Maxillofac. Surg , vol.41 , pp. 224-231
    • McMahon, J.1
  • 2
    • 0026042817 scopus 로고
    • The status of the resection margin as a prognostic factor in the treatment of head and neck carcinoma
    • Ravasz, L.A., Slootweg, P.J., Hordijk, G.J., Smit, F. & van der Tweel, I. The status of the resection margin as a prognostic factor in the treatment of head and neck carcinoma. J. Craniomaxillofac. Surg. 19, 314-318 (1991).
    • (1991) J. Craniomaxillofac. Surg , vol.19 , pp. 314-318
    • Ravasz, L.A.1    Slootweg, P.J.2    Hordijk, G.J.3    Smit, F.4    Van Der Tweel, I.5
  • 4
    • 38349107307 scopus 로고    scopus 로고
    • What is the role for the circumferential margin in the modern treatment of rectal cancer?
    • Nagtegaal, I.D. & Quirke, P. What is the role for the circumferential margin in the modern treatment of rectal cancer? J. Clin. Oncol. 26, 303-312 (2008).
    • (2008) J. Clin. Oncol , vol.26 , pp. 303-312
    • Nagtegaal, I.D.1    Quirke, P.2
  • 5
    • 0036845433 scopus 로고    scopus 로고
    • Surgical margins in patients with early-stage breast cancer treated with breast conservation therapy
    • Singletary, S.E. Surgical margins in patients with early-stage breast cancer treated with breast conservation therapy. Am. J. Surg. 184, 383-393 (2002).
    • (2002) Am. J. Surg , vol.184 , pp. 383-393
    • Singletary, S.E.1
  • 6
    • 0031882086 scopus 로고    scopus 로고
    • Survival in resected stage i lung cancer with residual tumor at the bronchial resection margin
    • Snijder, R.J., Brutel de la Riviere, A., Elbers, H.J. & van den Bosch, J.M. Survival in resected stage I lung cancer with residual tumor at the bronchial resection margin. Ann. Thorac. Surg. 65, 212-216 (1998).
    • (1998) Ann. Thorac. Surg , vol.65 , pp. 212-216
    • Snijder, R.J.1    De La Brutel, R.A.2    Elbers, H.J.3    Van Den, B.J.M.4
  • 7
    • 33644911778 scopus 로고    scopus 로고
    • Breast conservation surgery achieving ≥2 mm tumor-free margins results in decreased local-regional recurrence rates
    • Kunos, C. et al. Breast conservation surgery achieving ≥2 mm tumor-free margins results in decreased local-regional recurrence rates. Breast J. 12, 28-36 (2006).
    • (2006) Breast J , vol.12 , pp. 28-36
    • Kunos, C.1
  • 8
    • 84988561534 scopus 로고    scopus 로고
    • Specimen processing
    • Elsevier Saunders, Expert Consult
    • Kong, C.S. & Jensen, K.C. Specimen processing. in Practical Breast Pathology 15-23 (Elsevier Saunders, Expert Consult, 2013).
    • (2013) Practical Breast Pathology , pp. 15-23
    • Kong, C.S.1    Jensen, K.C.2
  • 9
    • 77950897673 scopus 로고    scopus 로고
    • Performance metrics of an optical spectral imaging system for intraoperative assessment of breast tumor margins
    • Bydlon, T.M. et al. Performance metrics of an optical spectral imaging system for intraoperative assessment of breast tumor margins. Opt. Express 18, 8058-8076 (2010).
    • (2010) Opt. Express , vol.18 , pp. 8058-8076
    • Bydlon, T.M.1
  • 10
    • 41549148650 scopus 로고    scopus 로고
    • Positive margins: The challenge continues for breast surgeons
    • Jacobs, L. Positive margins: The challenge continues for breast surgeons. Ann. Surg. Oncol. 15, 1271-1272 (2008).
    • (2008) Ann. Surg. Oncol , vol.15 , pp. 1271-1272
    • Jacobs, L.1
  • 11
    • 0032979110 scopus 로고    scopus 로고
    • Sampling of grossly benign breast reexcisions: A multidisciplinary approach to assessing adequacy
    • Abraham, S.C., Fox, K., Fraker, D., Solin, L. & Reynolds, C. Sampling of grossly benign breast reexcisions: A multidisciplinary approach to assessing adequacy. Am. J. Surg. Pathol. 23, 316-322 (1999).
    • (1999) Am. J. Surg. Pathol , vol.23 , pp. 316-322
    • Abraham, S.C.1    Fox, K.2    Fraker, D.3    Solin, L.4    Reynolds, C.5
  • 12
    • 84883192924 scopus 로고    scopus 로고
    • Fluorescence-guided surgery with live molecular navigation-A new cutting edge
    • Nguyen, Q.T. & Tsien, R.Y. Fluorescence-guided surgery with live molecular navigation-A new cutting edge. Nat. Rev. Cancer 13, 653-662 (2013).
    • (2013) Nat. Rev. Cancer , vol.13 , pp. 653-662
    • Nguyen, Q.T.1    Tsien, R.Y.2
  • 13
    • 33645986455 scopus 로고    scopus 로고
    • Fluorescence-guided surgery with 5-Aminolevulinic acid for resection of malignant glioma: A randomised controlled multicentre phase III trial
    • Stummer, W. et al. Fluorescence-guided surgery with 5-Aminolevulinic acid for resection of malignant glioma: A randomised controlled multicentre phase III trial. Lancet Oncol. 7, 392-401 (2006).
    • (2006) Lancet Oncol , vol.7 , pp. 392-401
    • Stummer, W.1
  • 14
    • 33644825565 scopus 로고    scopus 로고
    • Dynamic imaging of protease activity with fluorescently quenched activity-based probes
    • Blum, G. et al. Dynamic imaging of protease activity with fluorescently quenched activity-based probes. Nat. Chem. Biol. 1, 203-209 (2005).
    • (2005) Nat. Chem. Biol , vol.1 , pp. 203-209
    • Blum, G.1
  • 15
    • 84863263041 scopus 로고    scopus 로고
    • Topical application of activity-based probes for visualization of brain tumor tissue
    • Cutter, J.L. et al. Topical application of activity-based probes for visualization of brain tumor tissue. PLoS ONE 7, e33060 (2012).
    • (2012) PLoS ONE , vol.7 , pp. e33060
    • Cutter, J.L.1
  • 17
    • 84921466095 scopus 로고    scopus 로고
    • Detection of intestinal cancer by local, topical application of a quenched fluorescence probe for cysteine cathepsins
    • Segal, E. et al. Detection of intestinal cancer by local, topical application of a quenched fluorescence probe for cysteine cathepsins. Chem. Biol. 22, 148-158 (2015).
    • (2015) Chem. Biol , vol.22 , pp. 148-158
    • Segal, E.1
  • 18
    • 84885112885 scopus 로고    scopus 로고
    • Improved quenched fluorescent probe for imaging of cysteine cathepsin activity
    • Verdoes, M. et al. Improved quenched fluorescent probe for imaging of cysteine cathepsin activity. J. Am. Chem. Soc. 135, 14726-14730 (2013).
    • (2013) J. Am. Chem. Soc , vol.135 , pp. 14726-14730
    • Verdoes, M.1
  • 19
    • 0034128337 scopus 로고    scopus 로고
    • Cysteine proteinases and their inhibitors in extracellular fluids: Markers for diagnosis and prognosis in cancer
    • Kos, J., Werle, B., Lah, T. & Brunner, N. Cysteine proteinases and their inhibitors in extracellular fluids: markers for diagnosis and prognosis in cancer. Int. J. Biol. Markers 15, 84-89 (2000).
    • (2000) Int. J. Biol. Markers , vol.15 , pp. 84-89
    • Kos, J.1    Werle, B.2    Lah, T.3    Brunner, N.4
  • 20
    • 84903543514 scopus 로고    scopus 로고
    • Cysteine cathepsins and extracellular matrix degradation
    • Fonovic, M. & Turk, B. Cysteine cathepsins and extracellular matrix degradation. Biochim. Biophys. Acta 1840, 2560-2570 (2014).
    • (2014) Biochim. Biophys. Acta , vol.1840 , pp. 2560-2570
    • Fonovic, M.1    Turk, B.2
  • 21
    • 82755197676 scopus 로고    scopus 로고
    • Lysosomes and lysosomal cathepsins in cell death
    • Repnik, U., Stoka, V., Turk, V. & Turk, B. Lysosomes and lysosomal cathepsins in cell death. Biochim. Biophys. Acta 1824, 22-33 (2012).
    • (2012) Biochim. Biophys. Acta , vol.1824 , pp. 22-33
    • Repnik, U.1    Stoka, V.2    Turk, V.3    Turk, B.4
  • 22
    • 20444368841 scopus 로고    scopus 로고
    • Role of cathepsin S-dependent epithelial cell apoptosis in IFN-γ-induced alveolar remodeling and pulmonary emphysema
    • Zheng, T. et al. Role of cathepsin S-dependent epithelial cell apoptosis in IFN-γ-induced alveolar remodeling and pulmonary emphysema. J. Immunol. 174, 8106-8115 (2005).
    • (2005) J. Immunol , vol.174 , pp. 8106-8115
    • Zheng, T.1
  • 23
    • 34548666006 scopus 로고    scopus 로고
    • Noninvasive optical imaging of cysteine protease activity using fluorescently quenched activity-based probes
    • Blum, G., von Degenfeld, G., Merchant, M.J., Blau, H.M. & Bogyo, M. Noninvasive optical imaging of cysteine protease activity using fluorescently quenched activity-based probes. Nat. Chem. Biol. 3, 668-677 (2007).
    • (2007) Nat. Chem. Biol , vol.3 , pp. 668-677
    • Blum, G.1    Von Degenfeld, G.2    Merchant, M.J.3    Blau, H.M.4    Bogyo, M.5
  • 24
    • 84863229642 scopus 로고    scopus 로고
    • Cathepsin B inhibition limits bone metastasis in breast cancer
    • Withana, N.P. et al. Cathepsin B inhibition limits bone metastasis in breast cancer. Cancer Res. 72, 1199-1209 (2012).
    • (2012) Cancer Res , vol.72 , pp. 1199-1209
    • Withana, N.P.1
  • 25
    • 84902181290 scopus 로고    scopus 로고
    • Activity-based profiling of proteases
    • Sanman, L.E. & Bogyo, M. Activity-based profiling of proteases. Annu. Rev. Biochem. 83, 249-273 (2014).
    • (2014) Annu. Rev. Biochem , vol.83 , pp. 249-273
    • Sanman, L.E.1    Bogyo, M.2
  • 26
    • 84902956239 scopus 로고    scopus 로고
    • A comparative study on two different pathological methods to retrieve lymph nodes following gastrectomy
    • Lavy, R. et al. A comparative study on two different pathological methods to retrieve lymph nodes following gastrectomy. Int. J. Surg. 12, 725-728 (2014).
    • (2014) Int. J. Surg , vol.12 , pp. 725-728
    • Lavy, R.1
  • 27
    • 41649109067 scopus 로고    scopus 로고
    • Evaluation of the value of frozen tissue section used as gold standard" for immunohistochemistry
    • Shi, S.R. et al. Evaluation of the value of frozen tissue section used as "gold standard" for immunohistochemistry. Am. J. Clin. Pathol. 129, 358-366 (2008).
    • (2008) Am. J. Clin. Pathol , vol.129 , pp. 358-366
    • Shi, S.R.1
  • 29
    • 0023177846 scopus 로고
    • Enzyme histochemistry of the rat nasal mucosa embedded in cold glycol methacrylate
    • Randall, H.W., Bogdanffy, M.S. & Morgan, K.T. Enzyme histochemistry of the rat nasal mucosa embedded in cold glycol methacrylate. Am. J. Anat. 179, 10-17 (1987).
    • (1987) Am. J. Anat , vol.179 , pp. 10-17
    • Randall, H.W.1    Bogdanffy, M.S.2    Morgan, K.T.3
  • 30
    • 84861610305 scopus 로고    scopus 로고
    • A nonpeptidic cathepsin S activity-based probe for noninvasive optical imaging of tumor-Associated macrophages
    • Verdoes, M. et al. A nonpeptidic cathepsin S activity-based probe for noninvasive optical imaging of tumor-Associated macrophages. Chem. Biol. 19, 619-628 (2012).
    • (2012) Chem. Biol , vol.19 , pp. 619-628
    • Verdoes, M.1
  • 31
    • 0036051482 scopus 로고    scopus 로고
    • Chemical approaches for functionally probing the proteome
    • Greenbaum, D. et al. Chemical approaches for functionally probing the proteome. Mol. Cell. Proteomics 1, 60-68 (2002).
    • (2002) Mol. Cell. Proteomics , vol.1 , pp. 60-68
    • Greenbaum, D.1
  • 32
    • 84872113307 scopus 로고    scopus 로고
    • Functional imaging of legumain in cancer using a new quenched activity-based probe
    • Edgington, L.E. et al. Functional imaging of legumain in cancer using a new quenched activity-based probe. J. Am. Chem. Soc. 135, 174-182 (2013).
    • (2013) J. Am. Chem. Soc , vol.135 , pp. 174-182
    • Edgington, L.E.1
  • 33
    • 84865339202 scopus 로고    scopus 로고
    • Caspase-1 activity is required to bypass macrophage apoptosis upon Salmonella infection
    • Puri, A.W., Broz, P., Shen, A., Monack, D.M. & Bogyo, M. Caspase-1 activity is required to bypass macrophage apoptosis upon Salmonella infection. Nat. Chem. Biol. 8, 745-747 (2012).
    • (2012) Nat. Chem. Biol , vol.8 , pp. 745-747
    • Puri, A.W.1    Broz, P.2    Shen, A.3    Monack, D.M.4    Bogyo, M.5
  • 34
    • 84858981186 scopus 로고    scopus 로고
    • An optimized activity-based probe for the study of caspase-6 activation
    • Edgington, L.E. et al. An optimized activity-based probe for the study of caspase-6 activation. Chem. Biol. 19, 340-352 (2012).
    • (2012) Chem. Biol , vol.19 , pp. 340-352
    • Edgington, L.E.1
  • 35
    • 68349148319 scopus 로고    scopus 로고
    • Noninvasive optical imaging of apoptosis by caspase-Targeted activity-based probes
    • Edgington, L.E. et al. Noninvasive optical imaging of apoptosis by caspase-Targeted activity-based probes. Nat. Med. 15, 967-973 (2009).
    • (2009) Nat. Med , vol.15 , pp. 967-973
    • Edgington, L.E.1
  • 36
    • 84941312661 scopus 로고    scopus 로고
    • Photodynamic quenched cathepsin activity based probes for cancer detection and macrophage targeted therapy
    • Ben-Nun, Y. et al. Photodynamic quenched cathepsin activity based probes for cancer detection and macrophage targeted therapy. Theranostics 5, 847-862 (2015).
    • (2015) Theranostics , vol.5 , pp. 847-862
    • Ben-Nun, Y.1
  • 37
    • 18244406798 scopus 로고    scopus 로고
    • Activity probe for in vivo profiling of the specificity of proteasome inhibitor bortezomib
    • Berkers, C.R. et al. Activity probe for in vivo profiling of the specificity of proteasome inhibitor bortezomib. Nat. Methods 2, 357-362 (2005).
    • (2005) Nat. Methods , vol.2 , pp. 357-362
    • Berkers, C.R.1
  • 38
    • 0035469599 scopus 로고    scopus 로고
    • Direct visualization of serine hydrolase activities in complex proteomes using fluorescent active site-directed probes
    • Patricelli, M.P., Giang, D.K., Stamp, L.M. & Burbaum, J.J. Direct visualization of serine hydrolase activities in complex proteomes using fluorescent active site-directed probes. Proteomics 1, 1067-1071 (2001).
    • (2001) Proteomics , vol.1 , pp. 1067-1071
    • Patricelli, M.P.1    Giang, D.K.2    Stamp, L.M.3    Burbaum, J.J.4
  • 39
    • 0033593013 scopus 로고    scopus 로고
    • Activity-based protein profiling: The serine hydrolases
    • Liu, Y., Patricelli, M.P. & Cravatt, B.F. Activity-based protein profiling: The serine hydrolases. Proc. Natl. Acad. Sci. USA 96, 14694-14699 (1999).
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 14694-14699
    • Liu, Y.1    Patricelli, M.P.2    Cravatt, B.F.3
  • 40
    • 48849091633 scopus 로고    scopus 로고
    • Applications for chemical probes of proteolytic activity
    • Bogyo, M. et al. Applications for chemical probes of proteolytic activity. Curr. Protoc. Protein Sci. 36, 21.17.1-21.17.35 (2004).
    • (2004) Curr. Protoc. Protein Sci , vol.36 , pp. 21171-211735
    • Bogyo, M.1


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