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Volumn 6, Issue , 2016, Pages

Targeting cellular mRNAs translation by CRISPR-Cas9

Author keywords

[No Author keywords available]

Indexed keywords

APTAMER; CRISPR ASSOCIATED PROTEIN; DNA; LIGAND; MESSENGER RNA; RNA;

EID: 84978412112     PISSN: None     EISSN: 20452322     Source Type: Journal    
DOI: 10.1038/srep29652     Document Type: Article
Times cited : (21)

References (40)
  • 1
    • 84929666410 scopus 로고    scopus 로고
    • Expanding the Biologist's Toolkit with CRISPR-Cas9
    • Sternberg, S. H. & Doudna, J. A. Expanding the Biologist's Toolkit with CRISPR-Cas9. Mol Cell 58, 568-574 (2015).
    • (2015) Mol Cell , vol.58 , pp. 568-574
    • Sternberg, S.H.1    Doudna, J.A.2
  • 2
    • 84913594397 scopus 로고    scopus 로고
    • Genome editing. The new frontier of genome engineering with CRISPR-Cas9
    • Doudna, J. A. & Charpentier, E. Genome editing. The new frontier of genome engineering with CRISPR-Cas9. Science 346, 1258096 (2014).
    • (2014) Science , vol.346
    • Doudna, J.A.1    Charpentier, E.2
  • 3
    • 84907257107 scopus 로고    scopus 로고
    • Saturation editing of genomic regions by multiplex homologydirected repair
    • Findlay, G. M., Boyle, E. A., Hause, R. J., Klein, J. C. & Shendure, J. Saturation editing of genomic regions by multiplex homologydirected repair. Nature 513, 120-123 (2014).
    • (2014) Nature , vol.513 , pp. 120-123
    • Findlay, G.M.1    Boyle, E.A.2    Hause, R.J.3    Klein, J.C.4    Shendure, J.5
  • 4
    • 84900861730 scopus 로고    scopus 로고
    • High-throughput screening of a CRISPR/Cas9 library for functional genomics in human cells
    • Zhou, Y. et al. High-throughput screening of a CRISPR/Cas9 library for functional genomics in human cells. Nature 509, 487-491 (2014).
    • (2014) Nature , vol.509 , pp. 487-491
    • Zhou, Y.1
  • 5
    • 84983142945 scopus 로고    scopus 로고
    • Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials
    • Bikard, D. et al. Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials. Nat Biotechnol 32, 1146-1150 (2014).
    • (2014) Nat Biotechnol , vol.32 , pp. 1146-1150
    • Bikard, D.1
  • 6
    • 84902095352 scopus 로고    scopus 로고
    • Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells
    • Wu, X. et al. Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells. Nat Biotechnol 32, 670-676 (2014).
    • (2014) Nat Biotechnol , vol.32 , pp. 670-676
    • Wu, X.1
  • 7
    • 84902096048 scopus 로고    scopus 로고
    • Development applications of CRISPR-Cas9 for genome engineering
    • Hsu, P. D., Lander, E. S. & Zhang, F. Development and applications of CRISPR-Cas9 for genome engineering. Cell 157, 1262-1278 (2014).
    • (2014) Cell , vol.157 , pp. 1262-1278
    • Hsu, P.D.1    Lander, E.S.2    Zhang, F.3
  • 8
    • 84930503842 scopus 로고    scopus 로고
    • Advances in CRISPR-Cas9 genome engineering: Lessons learned from RNA interference
    • Barrangou, R. et al. Advances in CRISPR-Cas9 genome engineering: lessons learned from RNA interference. Nucleic Acids Res 43, 3407-3419 (2015).
    • (2015) Nucleic Acids Res , vol.43 , pp. 3407-3419
    • Barrangou, R.1
  • 9
    • 84874687019 scopus 로고    scopus 로고
    • Repurposing CRISPR as an RNA-guided platform for sequence-specific control of geneexpression
    • Qi, L. S. et al. Repurposing CRISPR as an RNA-guided platform for sequence-specific control of geneexpression. Cell 152, 1173-1183 (2013).
    • (2013) Cell , vol.152 , pp. 1173-1183
    • Qi, L.S.1
  • 10
    • 84884160273 scopus 로고    scopus 로고
    • CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering
    • Mali, P. et al. CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering. Nat Biotechnol 31, 833-838 (2013).
    • (2013) Nat Biotechnol , vol.31 , pp. 833-838
    • Mali, P.1
  • 11
    • 84920992414 scopus 로고    scopus 로고
    • Engineering complex synthetic transcriptional programs with CRISPR RNA scaffolds
    • Zalatan, J. G. et al. Engineering complex synthetic transcriptional programs with CRISPR RNA scaffolds. Cell 160, 339-350 (2015).
    • (2015) Cell , vol.160 , pp. 339-350
    • Zalatan, J.G.1
  • 12
    • 84895871173 scopus 로고    scopus 로고
    • DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
    • Sternberg, S. H., Redding, S., Jinek, M., Greene, E. C. & Doudna, J. A. DNA interrogation by the CRISPR RNA-guided endonuclease Cas9. Nature 507, 62-67 (2014).
    • (2014) Nature , vol.507 , pp. 62-67
    • Sternberg, S.H.1    Redding, S.2    Jinek, M.3    Greene, E.C.4    Doudna, J.A.5
  • 13
    • 84913568580 scopus 로고    scopus 로고
    • Programmable RNA recognition and cleavage by CRISPR/Cas9
    • O'Connell, M. R. et al. Programmable RNA recognition and cleavage by CRISPR/Cas9. Nature 516, 263-266 (2014).
    • (2014) Nature , vol.516 , pp. 263-266
    • O'Connell, M.R.1
  • 14
    • 84923086605 scopus 로고    scopus 로고
    • Targeted and genome-wide sequencing reveal single nucleotide variations impacting specificity of Cas9 in human stem cells
    • Yang, L. et al. Targeted and genome-wide sequencing reveal single nucleotide variations impacting specificity of Cas9 in human stem cells. Nat Commun 5, 5507 (2014).
    • (2014) Nat Commun , vol.5 , pp. 5507
    • Yang, L.1
  • 15
    • 84880570576 scopus 로고    scopus 로고
    • High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells
    • Fu, Y. et al. High-frequency off-target mutagenesis induced by CRISPR-Cas nucleases in human cells. Nat Biotechnol 31, 822-826 (2013).
    • (2013) Nat Biotechnol , vol.31 , pp. 822-826
    • Fu, Y.1
  • 16
    • 84896929630 scopus 로고    scopus 로고
    • Improving CRISPR-Cas nuclease specificity using truncated guide RNAs
    • Fu, Y., Sander, J. D., Reyon, D., Cascio, V. M. & Joung, J. K. Improving CRISPR-Cas nuclease specificity using truncated guide RNAs. Nat Biotechnol 32, 279-284 (2014).
    • (2014) Nat Biotechnol , vol.32 , pp. 279-284
    • Fu, Y.1    Sander, J.D.2    Reyon, D.3    Cascio, V.M.4    Joung, J.K.5
  • 17
    • 84957605863 scopus 로고    scopus 로고
    • Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9
    • Doench, J. G. et al. Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9. Nat Biotechnol 34, 184-191 (2016).
    • (2016) Nat Biotechnol , vol.34 , pp. 184-191
    • Doench, J.G.1
  • 18
    • 84952943845 scopus 로고    scopus 로고
    • Rationally engineered Cas9 nucleases with improved specificity
    • Slaymaker, I. M. et al. Rationally engineered Cas9 nucleases with improved specificity. Science 351, 84-88 (2016).
    • (2016) Science , vol.351 , pp. 84-88
    • Slaymaker, I.M.1
  • 19
    • 84963941043 scopus 로고    scopus 로고
    • High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects
    • Kleinstiver, B. P. et al. High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects. Nature 529, 490-495 (2016 ).
    • (2016) Nature , vol.529 , pp. 490-495
    • Kleinstiver, B.P.1
  • 20
    • 0021894993 scopus 로고
    • Production of phenocopies by Krüppel antisense RNA injection into Drosophila embryos
    • Rosenberg, U. B., Preiss, A., Seifert, E., Jäckle, H. & Knipple, D. C. Production of phenocopies by Krüppel antisense RNA injection into Drosophila embryos. Nature 313, 703-706 (1985).
    • (1985) Nature , vol.313 , pp. 703-706
    • Rosenberg, U.B.1    Preiss, A.2    Seifert, E.3    Jäckle, H.4    Knipple, D.C.5
  • 21
    • 0033986726 scopus 로고    scopus 로고
    • Intracellular mRNA cleavage induced through activation of RNase P by nuclease-resistant external guide sequences
    • Ma, M. et al. Intracellular mRNA cleavage induced through activation of RNase P by nuclease-resistant external guide sequences. Nat Biotechnol 18, 58-61 (2000).
    • (2000) Nat Biotechnol , vol.18 , pp. 58-61
    • Ma, M.1
  • 22
    • 0032545933 scopus 로고    scopus 로고
    • Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans
    • Fire, A. et al. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans. Nature 391, 806-811 (1998).
    • (1998) Nature , vol.391 , pp. 806-811
    • Fire, A.1
  • 23
    • 70449753811 scopus 로고    scopus 로고
    • RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex
    • Hale, C. R. et al. RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex. Cell 139, 945-956 (2009).
    • (2009) Cell , vol.139 , pp. 945-956
    • Hale, C.R.1
  • 25
    • 84904054856 scopus 로고    scopus 로고
    • Human and mouse VEGFA-amplified hepatocellular carcinomas are highly sensitive to sorafenib treatment
    • Horwitz, E. et al. Human and mouse VEGFA-amplified hepatocellular carcinomas are highly sensitive to sorafenib treatment. Cancer Discov 4, 730-743 (2014).
    • (2014) Cancer Discov , vol.4 , pp. 730-743
    • Horwitz, E.1
  • 26
    • 84872678206 scopus 로고    scopus 로고
    • β 3GnT8 regulates laryngeal carcinoma cell proliferation via targeting MMPs/TIMPs and TGF-β 1
    • Hua, D. et al. β 3GnT8 regulates laryngeal carcinoma cell proliferation via targeting MMPs/TIMPs and TGF-β 1. Asian Pac J Cancer Prev 13, 2087-2093 (2012).
    • (2012) Asian Pac J Cancer Prev , vol.13 , pp. 2087-2093
    • Hua, D.1
  • 27
    • 79953775746 scopus 로고    scopus 로고
    • Down-regulation of β -13-N-acetylglucosaminyltransferase-8 by siRNA inhibits the growth of human gastric cancer
    • Liu. Z. et al. Down-regulation of β -1,3-N-acetylglucosaminyltransferase-8 by siRNA inhibits the growth of human gastric cancer. Mol Med Rep. 4, 497-503 (2011).
    • (2011) Mol Med Rep , vol.4 , pp. 497-503
    • Liu, Z.1
  • 28
    • 0029972909 scopus 로고    scopus 로고
    • Structural basis of ligand discrimination by two related RNA aptamers resolved by NMR spectroscopy
    • Yang, Y., Kochoyan, M., Burgstaller, P., Westhof, E. & Famulok, M. Structural basis of ligand discrimination by two related RNA aptamers resolved by NMR spectroscopy. Science 272, 1343-1347 (1996).
    • (1996) Science , vol.272 , pp. 1343-1347
    • Yang, Y.1    Kochoyan, M.2    Burgstaller, P.3    Westhof, E.4    Famulok, M.5
  • 29
    • 0032500736 scopus 로고    scopus 로고
    • Controlling gene expression in living cells through small molecule-RNA interactions
    • Werstuck, G. & Green, M. R. Controlling gene expression in living cells through small molecule-RNA interactions. Science 282, 296-298 (1998).
    • (1998) Science , vol.282 , pp. 296-298
    • Werstuck, G.1    Green, M.R.2
  • 30
    • 0021113926 scopus 로고
    • Interaction of R17 coat protein with synthetic variants of its ribonucleic acid binding site
    • Carey, J., Lowary, P. T. & Uhlenbeck, O. C. Interaction of R17 coat protein with synthetic variants of its ribonucleic acid binding site. Biochemistry 22, 4723-4730 (1983).
    • (1983) Biochemistry , vol.22 , pp. 4723-4730
    • Carey, J.1    Lowary, P.T.2    Uhlenbeck, O.C.3
  • 31
    • 0037388001 scopus 로고    scopus 로고
    • Conditional gene expression by controlling translation with tetracycline-binding aptamers
    • Suess, B. et al. Conditional gene expression by controlling translation with tetracycline-binding aptamers. Nucleic Acids Res 31, 1853-8 (2003).
    • (2003) Nucleic Acids Res , vol.31 , pp. 1853-1858
    • Suess, B.1
  • 32
    • 84927145212 scopus 로고    scopus 로고
    • Osteopontin promotes a cancer stem cell-like phenotype in hepatocellular carcinoma cells via an integrin-NF- B-HIF- 1α pathway
    • Cao, L. et al. Osteopontin promotes a cancer stem cell-like phenotype in hepatocellular carcinoma cells via an integrin-NF- B-HIF- 1α pathway. Oncotarget 6, 6627-6640 (2015).
    • (2015) Oncotarget , vol.6 , pp. 6627-6640
    • Cao, L.1
  • 33
    • 84929353279 scopus 로고    scopus 로고
    • Visualization and tracking of tumour extracellular vesicle delivery and RNA translation using multiplexed reporters
    • Lai, C. P. et al. Visualization and tracking of tumour extracellular vesicle delivery and RNA translation using multiplexed reporters. Nat Commun 6, 7029 (2015).
    • (2015) Nat Commun , vol.6 , pp. 7029
    • Lai, C.P.1
  • 34
    • 84904013434 scopus 로고    scopus 로고
    • SiPools: Highly complex but accurately defined siRNA pools eliminate off-target effects
    • Hannus, M. et al. siPools: highly complex but accurately defined siRNA pools eliminate off-target effects. Nucleic Acids Res 42, 8049-8061 (2014).
    • (2014) Nucleic Acids Res , vol.42 , pp. 8049-8061
    • Hannus, M.1
  • 35
    • 84891710947 scopus 로고    scopus 로고
    • Analysis of off-target effects of CRISPR/Cas-derived RNA-guided endonucleases and nickases
    • Cho S. W. et al. Analysis of off-target effects of CRISPR/Cas-derived RNA-guided endonucleases and nickases. Genome Res 24, 132-141 (2014).
    • (2014) Genome Res , vol.24 , pp. 132-141
    • Cho, S.W.1
  • 36
    • 84884288934 scopus 로고    scopus 로고
    • Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity
    • Ran F. A. et al. Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. Cell 154, 1380-1389 (2013).
    • (2013) Cell , vol.154 , pp. 1380-1389
    • Ran, F.A.1
  • 37
    • 84897954175 scopus 로고    scopus 로고
    • Efficient genome modification by CRISPR-Cas9 nickase with minimal off-target effects
    • Shen, B. et al. Efficient genome modification by CRISPR-Cas9 nickase with minimal off-target effects. Nat Methods 11, 399-402 (2014).
    • (2014) Nat Methods , vol.11 , pp. 399-402
    • Shen, B.1
  • 38
    • 84924945394 scopus 로고    scopus 로고
    • Protein-responsive ribozyme switches in eukaryotic cells
    • Kennedy, A. B., Vowles, J. V., d'Espaux, L. & Smolke, C. D. Protein-responsive ribozyme switches in eukaryotic cells. Nucleic Acids Res 42, 12306-12321 (2014).
    • (2014) Nucleic Acids Res , vol.42 , pp. 12306-12321
    • Kennedy, A.B.1    Vowles, J.V.2    D'Espaux, L.3    Smolke, C.D.4
  • 39
    • 84961226910 scopus 로고    scopus 로고
    • Programmable RNA Tracking in Live Cells with CRISPR/Cas9
    • Nelles, D. A. et al. Programmable RNA Tracking in Live Cells with CRISPR/Cas9. Cell 165, 488-496 (2016).
    • (2016) Cell , vol.165 , pp. 488-496
    • Nelles, D.A.1
  • 40
    • 84897546295 scopus 로고    scopus 로고
    • Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing
    • Gao, Y. & Zhao, Y. Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing. Journal of integrative plant biology 56, 343-349 (2014).
    • (2014) Journal of Integrative Plant Biology , vol.56 , pp. 343-349
    • Gao, Y.1    Zhao, Y.2


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