-
1
-
-
84947261334
-
Clostridium difficile infection and intestinal microbiota interactions
-
Nov 5
-
[1] Rodriguez, C., Taminiau, B., Van, B.J., Delmee, M., Daube, G., Clostridium difficile infection and intestinal microbiota interactions. Microb. Pathog. 89 (2015 Nov 5), 201–209.
-
(2015)
Microb. Pathog.
, vol.89
, pp. 201-209
-
-
Rodriguez, C.1
Taminiau, B.2
Van, B.J.3
Delmee, M.4
Daube, G.5
-
2
-
-
84945295917
-
Interactions between the gastrointestinal microbiome and Clostridium difficile
-
Oct 15
-
[2] Theriot, C.M., Young, V.B., Interactions between the gastrointestinal microbiome and Clostridium difficile. Annu. Rev. Microbiol. 69 (2015 Oct 15), 445–461.
-
(2015)
Annu. Rev. Microbiol.
, vol.69
, pp. 445-461
-
-
Theriot, C.M.1
Young, V.B.2
-
3
-
-
84959553385
-
Composition of human faecal microbiota in resistance to Campylobacter infection
-
61.e1–8 Sep 11
-
[3] Kampmann, C., Dicksved, J., Engstrand, L., Rautelin, H., Composition of human faecal microbiota in resistance to Campylobacter infection. Clin. Microbiol. Infect., 22(1), 2015 Sep 11 61.e1–8.
-
(2015)
Clin. Microbiol. Infect.
, vol.22
, Issue.1
-
-
Kampmann, C.1
Dicksved, J.2
Engstrand, L.3
Rautelin, H.4
-
4
-
-
84908003512
-
TLR5-mediated sensing of gut microbiota is necessary for antibody responses to seasonal influenza vaccination
-
Sep 18
-
[4] Oh, J.Z., Ravindran, R., Chassaing, B., Carvalho, F.A., Maddur, M.S., Bower, M., et al. TLR5-mediated sensing of gut microbiota is necessary for antibody responses to seasonal influenza vaccination. Immunity 41:3 (2014 Sep 18), 478–492.
-
(2014)
Immunity
, vol.41
, Issue.3
, pp. 478-492
-
-
Oh, J.Z.1
Ravindran, R.2
Chassaing, B.3
Carvalho, F.A.4
Maddur, M.S.5
Bower, M.6
-
5
-
-
84924406819
-
Interactions of Salmonella enterica subspecies enterica serovar typhimurium with gut bacteria
-
Jun
-
[5] Avendano-Perez, G., Nueno-Palop, C., Narbad, A., George, S.M., Baranyi, J., Pin, C., Interactions of Salmonella enterica subspecies enterica serovar typhimurium with gut bacteria. Anaerobe 33 (2015 Jun), 90–97.
-
(2015)
Anaerobe
, vol.33
, pp. 90-97
-
-
Avendano-Perez, G.1
Nueno-Palop, C.2
Narbad, A.3
George, S.M.4
Baranyi, J.5
Pin, C.6
-
6
-
-
67249113428
-
In vitro inhibition activity of different bacteriocin-producing Escherichia coli against Salmonella strains isolated from clinical cases
-
Jul
-
[6] Zihler, A., Le, B.G., de, W.T., Lacroix, C., Braegger, C.P., Lehner, A., et al. In vitro inhibition activity of different bacteriocin-producing Escherichia coli against Salmonella strains isolated from clinical cases. Lett. Appl. Microbiol. 49:1 (2009 Jul), 31–38.
-
(2009)
Lett. Appl. Microbiol.
, vol.49
, Issue.1
, pp. 31-38
-
-
Zihler, A.1
Le, B.G.2
de, W.T.3
Lacroix, C.4
Braegger, C.P.5
Lehner, A.6
-
7
-
-
84856567115
-
Transient TLR activation restores inflammatory response and ability to control pulmonary bacterial infection in germfree mice
-
Feb 1
-
[7] Fagundes, C.T., Amaral, F.A., Vieira, A.T., Soares, A.C., Pinho, V., Nicoli, J.R., et al. Transient TLR activation restores inflammatory response and ability to control pulmonary bacterial infection in germfree mice. J. Immunol. 188:3 (2012 Feb 1), 1411–1420.
-
(2012)
J. Immunol.
, vol.188
, Issue.3
, pp. 1411-1420
-
-
Fagundes, C.T.1
Amaral, F.A.2
Vieira, A.T.3
Soares, A.C.4
Pinho, V.5
Nicoli, J.R.6
-
8
-
-
84944472849
-
Intestinal microbiota of mice influences resistance to Staphylococcus aureus pneumonia
-
Oct
-
[8] Gauguet, S., D'Ortona, S., Ahnger-Pier, K., Duan, B., Surana, N.K., Lu, R., et al. Intestinal microbiota of mice influences resistance to Staphylococcus aureus pneumonia. Infect. Immun. 83:10 (2015 Oct), 4003–4014.
-
(2015)
Infect. Immun.
, vol.83
, Issue.10
, pp. 4003-4014
-
-
Gauguet, S.1
D'Ortona, S.2
Ahnger-Pier, K.3
Duan, B.4
Surana, N.K.5
Lu, R.6
-
9
-
-
33845532053
-
Microbial translocation is a cause of systemic immune activation in chronic HIV infection
-
Dec
-
[9] Brenchley, J.M., Price, D.A., Schacker, T.W., Asher, T.E., Silvestri, G., Rao, S., et al. Microbial translocation is a cause of systemic immune activation in chronic HIV infection. Nat. Med. 12:12 (2006 Dec), 1365–1371.
-
(2006)
Nat. Med.
, vol.12
, Issue.12
, pp. 1365-1371
-
-
Brenchley, J.M.1
Price, D.A.2
Schacker, T.W.3
Asher, T.E.4
Silvestri, G.5
Rao, S.6
-
10
-
-
0025127189
-
Life-threatening bacteraemia in HIV-1 seropositive adults admitted to hospital in Nairobi, Kenya
-
Sep 1
-
[10] Gilks, C.F., Brindle, R.J., Otieno, L.S., Simani, P.M., Newnham, R.S., Bhatt, S.M., et al. Life-threatening bacteraemia in HIV-1 seropositive adults admitted to hospital in Nairobi, Kenya. Lancet 336:8714 (1990 Sep 1), 545–549.
-
(1990)
Lancet
, vol.336
, Issue.8714
, pp. 545-549
-
-
Gilks, C.F.1
Brindle, R.J.2
Otieno, L.S.3
Simani, P.M.4
Newnham, R.S.5
Bhatt, S.M.6
-
11
-
-
84921503116
-
Risk factors for invasive pneumococcal disease in HIV-infected adults in France in the highly active antiretroviral therapy era
-
Dec
-
[11] Munier, A.L., de Lastours, V., Porcher, R., Donay, J.L., Pons, J.L., Molina, J.M., Risk factors for invasive pneumococcal disease in HIV-infected adults in France in the highly active antiretroviral therapy era. Int. J. STD AIDS 25:14 (2014 Dec), 1022–1028.
-
(2014)
Int. J. STD AIDS
, vol.25
, Issue.14
, pp. 1022-1028
-
-
Munier, A.L.1
de Lastours, V.2
Porcher, R.3
Donay, J.L.4
Pons, J.L.5
Molina, J.M.6
-
12
-
-
84867566255
-
Microbiological analysis of nontyphoidal Salmonella strains causing distinct syndromes of bacteremia or enteritis in HIV/AIDS patients in San Diego, California
-
Nov
-
[12] Preziosi, M.J., Kandel, S.M., Guiney, D.G., Browne, S.H., Microbiological analysis of nontyphoidal Salmonella strains causing distinct syndromes of bacteremia or enteritis in HIV/AIDS patients in San Diego, California. J. Clin. Microbiol. 50:11 (2012 Nov), 3598–3603.
-
(2012)
J. Clin. Microbiol.
, vol.50
, Issue.11
, pp. 3598-3603
-
-
Preziosi, M.J.1
Kandel, S.M.2
Guiney, D.G.3
Browne, S.H.4
-
13
-
-
33846437113
-
Case-control study of shigellosis in San Francisco: the role of sexual transmission and HIV infection
-
Feb 1
-
[13] Aragon, T.J., Vugia, D.J., Shallow, S., Samuel, M.C., Reingold, A., Angulo, F.J., et al. Case-control study of shigellosis in San Francisco: the role of sexual transmission and HIV infection. Clin. Infect. Dis. 44:3 (2007 Feb 1), 327–334.
-
(2007)
Clin. Infect. Dis.
, vol.44
, Issue.3
, pp. 327-334
-
-
Aragon, T.J.1
Vugia, D.J.2
Shallow, S.3
Samuel, M.C.4
Reingold, A.5
Angulo, F.J.6
-
14
-
-
84919665956
-
Intraspecies competition for niches in the distal gut dictate transmission during persistent Salmonella infection
-
Dec
-
[14] Lam, L.H., Monack, D.M., Intraspecies competition for niches in the distal gut dictate transmission during persistent Salmonella infection. PLoS Pathog., 10(12), 2014 Dec, e1004527.
-
(2014)
PLoS Pathog.
, vol.10
, Issue.12
, pp. e1004527
-
-
Lam, L.H.1
Monack, D.M.2
-
15
-
-
84877875555
-
The gut microbiota of a patient with resistant tuberculosis is more comprehensively studied by culturomics than by metagenomics
-
May
-
[15] Dubourg, G., Lagier, J.C., Armougom, F., Robert, C., Hamad, I., Brouqui, P., et al. The gut microbiota of a patient with resistant tuberculosis is more comprehensively studied by culturomics than by metagenomics. Eur. J. Clin. Microbiol. Infect. Dis. 32:5 (2013 May), 637–645.
-
(2013)
Eur. J. Clin. Microbiol. Infect. Dis.
, vol.32
, Issue.5
, pp. 637-645
-
-
Dubourg, G.1
Lagier, J.C.2
Armougom, F.3
Robert, C.4
Hamad, I.5
Brouqui, P.6
-
16
-
-
84868568180
-
Differences in microbial signatures between rectal mucosal biopsies and rectal swabs
-
Nov
-
[16] Araujo-Perez, F., McCoy, A.N., Okechukwu, C., Carroll, I.M., Smith, K.M., Jeremiah, K., et al. Differences in microbial signatures between rectal mucosal biopsies and rectal swabs. Gut Microbes 3:6 (2012 Nov), 530–535.
-
(2012)
Gut Microbes
, vol.3
, Issue.6
, pp. 530-535
-
-
Araujo-Perez, F.1
McCoy, A.N.2
Okechukwu, C.3
Carroll, I.M.4
Smith, K.M.5
Jeremiah, K.6
-
17
-
-
3242809884
-
Microbiota composition of the intestinal mucosa: association with fecal microbiota?
-
[17] Ouwehand, A.C., Salminen, S., Arvola, T., Ruuska, T., Isolauri, E., Microbiota composition of the intestinal mucosa: association with fecal microbiota?. Microbiol. Immunol. 48:7 (2004), 497–500.
-
(2004)
Microbiol. Immunol.
, vol.48
, Issue.7
, pp. 497-500
-
-
Ouwehand, A.C.1
Salminen, S.2
Arvola, T.3
Ruuska, T.4
Isolauri, E.5
-
18
-
-
2442510059
-
Improved extraction of PCR-quality community DNA from digesta and fecal samples
-
May
-
[18] Yu, Z., Morrison, M., Improved extraction of PCR-quality community DNA from digesta and fecal samples. Biotechniques 36:5 (2004 May), 808–812.
-
(2004)
Biotechniques
, vol.36
, Issue.5
, pp. 808-812
-
-
Yu, Z.1
Morrison, M.2
-
19
-
-
77951977802
-
Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis
-
May
-
[19] Salonen, A., Nikkila, J., Jalanka-Tuovinen, J., Immonen, O., Rajilic-Stojanovic, M., Kekkonen, R.A., et al. Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: effective recovery of bacterial and archaeal DNA using mechanical cell lysis. J. Microbiol. Methods 81:2 (2010 May), 127–134.
-
(2010)
J. Microbiol. Methods
, vol.81
, Issue.2
, pp. 127-134
-
-
Salonen, A.1
Nikkila, J.2
Jalanka-Tuovinen, J.3
Immonen, O.4
Rajilic-Stojanovic, M.5
Kekkonen, R.A.6
-
20
-
-
79251644660
-
Comparison of the QIAsymphony automated nucleic acid extraction and PCR setup platforms with NucliSens easyMAG and Corbett CAS-1200 liquid handling station for the detection of enteric pathogens in fecal samples
-
Feb
-
[20] van, Z.E., Wisselink, G.J., de, B.W., Stoll, S., Alvarez, R., Kooistra-Smid, A.M., Comparison of the QIAsymphony automated nucleic acid extraction and PCR setup platforms with NucliSens easyMAG and Corbett CAS-1200 liquid handling station for the detection of enteric pathogens in fecal samples. J. Microbiol. Methods 84:2 (2011 Feb), 335–340.
-
(2011)
J. Microbiol. Methods
, vol.84
, Issue.2
, pp. 335-340
-
-
van, Z.E.1
Wisselink, G.J.2
de, B.W.3
Stoll, S.4
Alvarez, R.5
Kooistra-Smid, A.M.6
-
21
-
-
84892586947
-
Microbial diversity in fecal samples depends on DNA extraction method: easyMag DNA extraction compared to QIAamp DNA stool mini kit extraction
-
[21] Mirsepasi, H., Persson, S., Struve, C., Andersen, L.O., Petersen, A.M., Krogfelt, K.A., Microbial diversity in fecal samples depends on DNA extraction method: easyMag DNA extraction compared to QIAamp DNA stool mini kit extraction. BMC Res. Notes, 7, 2014, 50.
-
(2014)
BMC Res. Notes
, vol.7
, pp. 50
-
-
Mirsepasi, H.1
Persson, S.2
Struve, C.3
Andersen, L.O.4
Petersen, A.M.5
Krogfelt, K.A.6
-
22
-
-
84896089558
-
The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing
-
[22] Kennedy, N.A., Walker, A.W., Berry, S.H., Duncan, S.H., Farquarson, F.M., Louis, P., et al. The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing. PloS one, 9(2), 2014, e88982.
-
(2014)
PloS one
, vol.9
, Issue.2
, pp. e88982
-
-
Kennedy, N.A.1
Walker, A.W.2
Berry, S.H.3
Duncan, S.H.4
Farquarson, F.M.5
Louis, P.6
-
23
-
-
84878869719
-
A comparison of the efficiency of five different commercial DNA extraction kits for extraction of DNA from faecal samples
-
Aug
-
[23] Claassen, S., du, T.E., Kaba, M., Moodley, C., Zar, H.J., Nicol, M.P., A comparison of the efficiency of five different commercial DNA extraction kits for extraction of DNA from faecal samples. J. Microbiol. Methods 94:2 (2013 Aug), 103–110.
-
(2013)
J. Microbiol. Methods
, vol.94
, Issue.2
, pp. 103-110
-
-
Claassen, S.1
du, T.E.2
Kaba, M.3
Moodley, C.4
Zar, H.J.5
Nicol, M.P.6
-
24
-
-
85018233137
-
Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance
-
[24] Kembel, S.W., Wu, M., Eisen, J.A., Green, J.L., Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance. 2012.
-
(2012)
-
-
Kembel, S.W.1
Wu, M.2
Eisen, J.A.3
Green, J.L.4
-
25
-
-
84874536596
-
The variability of the 16S rRNA gene in bacterial genomes and its consequences for bacterial community analyses
-
[25] Vetrovsky, T., Baldrian, P., The variability of the 16S rRNA gene in bacterial genomes and its consequences for bacterial community analyses. PloS one, 8(2), 2013, e57923.
-
(2013)
PloS one
, vol.8
, Issue.2
, pp. e57923
-
-
Vetrovsky, T.1
Baldrian, P.2
-
26
-
-
84860124422
-
Variable copy number, intra-genomic heterogeneities and lateral transfers of the 16S rRNA gene in Pseudomonas
-
[26] Bodilis, J., Nsigue-Meilo, S., Besaury, L., Quillet, L., Variable copy number, intra-genomic heterogeneities and lateral transfers of the 16S rRNA gene in Pseudomonas. PLoS One, 7(4), 2012, e35647.
-
(2012)
PLoS One
, vol.7
, Issue.4
, pp. e35647
-
-
Bodilis, J.1
Nsigue-Meilo, S.2
Besaury, L.3
Quillet, L.4
-
27
-
-
84905661514
-
CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction
-
[27] Angly, F.E., Dennis, P.G., Skarshewski, A., Vanwonterghem, I., Hugenholtz, P., Tyson, G.W., CopyRighter: a rapid tool for improving the accuracy of microbial community profiles through lineage-specific gene copy number correction. Microbiome, 2, 2014, 11.
-
(2014)
Microbiome
, vol.2
, pp. 11
-
-
Angly, F.E.1
Dennis, P.G.2
Skarshewski, A.3
Vanwonterghem, I.4
Hugenholtz, P.5
Tyson, G.W.6
-
28
-
-
78650453707
-
Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions
-
Dec
-
[28] MJ1, Claesson, Wang, Q., O'Sullivan, O., Greene-Diniz, R., Cole, J.R., Ross, R.P., Comparison of two next-generation sequencing technologies for resolving highly complex microbiota composition using tandem variable 16S rRNA gene regions. Nucleic Acids Res., 38(22), 2010 Dec.
-
(2010)
Nucleic Acids Res.
, vol.38
, Issue.22
-
-
MJ1, C.1
Wang, Q.2
O'Sullivan, O.3
Greene-Diniz, R.4
Cole, J.R.5
Ross, R.P.6
-
29
-
-
84869113067
-
Microbial culturomics: paradigm shift in the human gut microbiome study
-
Dec
-
[29] Lagier, J.C., Armougom, F., Million, M., Hugon, P., Pagnier, I., Robert, C., et al. Microbial culturomics: paradigm shift in the human gut microbiome study. Clin. Microbiol. Infect. 18:12 (2012 Dec), 1185–1193.
-
(2012)
Clin. Microbiol. Infect.
, vol.18
, Issue.12
, pp. 1185-1193
-
-
Lagier, J.C.1
Armougom, F.2
Million, M.3
Hugon, P.4
Pagnier, I.5
Robert, C.6
-
30
-
-
33646577466
-
Reciprocal developmental pathways for the generation of pathogenic effector TH17 and regulatory T cells
-
May 11
-
[30] Bettelli, E., Carrier, Y., Gao, W., Korn, T., Strom, T.B., Oukka, M., et al. Reciprocal developmental pathways for the generation of pathogenic effector TH17 and regulatory T cells. Nature 441:7090 (2006 May 11), 235–238.
-
(2006)
Nature
, vol.441
, Issue.7090
, pp. 235-238
-
-
Bettelli, E.1
Carrier, Y.2
Gao, W.3
Korn, T.4
Strom, T.B.5
Oukka, M.6
-
31
-
-
84878392088
-
Essentials of Th17 cell commitment and plasticity
-
Mar 28
-
[31] Muranski, P., Restifo, N.P., Essentials of Th17 cell commitment and plasticity. Blood 121:13 (2013 Mar 28), 2402–2414.
-
(2013)
Blood
, vol.121
, Issue.13
, pp. 2402-2414
-
-
Muranski, P.1
Restifo, N.P.2
-
32
-
-
84944445669
-
A commensal symbiotic factor derived from Bacteroides fragilis promotes human CD39(+)Foxp3(+) T cells and Treg function
-
Jul 4
-
[32] Telesford, K.M., Yan, W., Ochoa-Reparaz, J., Pant, A., Kircher, C., Christy, M.A., et al. A commensal symbiotic factor derived from Bacteroides fragilis promotes human CD39(+)Foxp3(+) T cells and Treg function. Gut Microbes 6:4 (2015 Jul 4), 234–242.
-
(2015)
Gut Microbes
, vol.6
, Issue.4
, pp. 234-242
-
-
Telesford, K.M.1
Yan, W.2
Ochoa-Reparaz, J.3
Pant, A.4
Kircher, C.5
Christy, M.A.6
-
33
-
-
85027947787
-
Induction of colonic regulatory T cells by indigenous Clostridium species
-
Jan 21
-
[33] Atarashi, K., Tanoue, T., Shima, T., Imaoka, A., Kuwahara, T., Momose, Y., et al. Induction of colonic regulatory T cells by indigenous Clostridium species. Science 331:6015 (2011 Jan 21), 337–341.
-
(2011)
Science
, vol.331
, Issue.6015
, pp. 337-341
-
-
Atarashi, K.1
Tanoue, T.2
Shima, T.3
Imaoka, A.4
Kuwahara, T.5
Momose, Y.6
-
34
-
-
84890564250
-
Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells
-
Dec 19
-
[34] Furusawa, Y., Obata, Y., Fukuda, S., Endo, T.A., Nakato, G., Takahashi, D., et al. Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells. Nature 504:7480 (2013 Dec 19), 446–450.
-
(2013)
Nature
, vol.504
, Issue.7480
, pp. 446-450
-
-
Furusawa, Y.1
Obata, Y.2
Fukuda, S.3
Endo, T.A.4
Nakato, G.5
Takahashi, D.6
-
35
-
-
70350343544
-
Induction of intestinal Th17 cells by segmented filamentous bacteria
-
Oct 30
-
[35] Ivanov II, Atarashi, K., Manel, N., Brodie, E.L., Shima, T., Karaoz, U., et al. Induction of intestinal Th17 cells by segmented filamentous bacteria. Cell 139:3 (2009 Oct 30), 485–498.
-
(2009)
Cell
, vol.139
, Issue.3
, pp. 485-498
-
-
Ivanov1
Atarashi, K.2
Manel, N.3
Brodie, E.L.4
Shima, T.5
Karaoz, U.6
-
36
-
-
42049095290
-
The mucosal barrier and immune activation in HIV pathogenesis
-
May
-
[36] Brenchley, J.M., Douek, D.C., The mucosal barrier and immune activation in HIV pathogenesis. Curr. Opin. HIV AIDS 3:3 (2008 May), 356–361.
-
(2008)
Curr. Opin. HIV AIDS
, vol.3
, Issue.3
, pp. 356-361
-
-
Brenchley, J.M.1
Douek, D.C.2
-
37
-
-
45449104669
-
Altered balance between Th17 and Th1 cells at mucosal sites predicts AIDS progression in simian immunodeficiency virus-infected macaques
-
Jul
-
[37] Cecchinato, V., Trindade, C.J., Laurence, A., Heraud, J.M., Brenchley, J.M., Ferrari, M.G., et al. Altered balance between Th17 and Th1 cells at mucosal sites predicts AIDS progression in simian immunodeficiency virus-infected macaques. Mucosal Immunol. 1:4 (2008 Jul), 279–288.
-
(2008)
Mucosal Immunol.
, vol.1
, Issue.4
, pp. 279-288
-
-
Cecchinato, V.1
Trindade, C.J.2
Laurence, A.3
Heraud, J.M.4
Brenchley, J.M.5
Ferrari, M.G.6
-
38
-
-
77950349016
-
Th17 and regulatory T cells in mediating and restraining inflammation
-
Mar 19
-
[38] Littman, D.R., Rudensky, A.Y., Th17 and regulatory T cells in mediating and restraining inflammation. Cell 140:6 (2010 Mar 19), 845–858.
-
(2010)
Cell
, vol.140
, Issue.6
, pp. 845-858
-
-
Littman, D.R.1
Rudensky, A.Y.2
-
39
-
-
61449115882
-
Critical loss of the balance between Th17 and T regulatory cell populations in pathogenic SIV infection
-
[39] Favre, D., Lederer, S., Kanwar, B., Ma, Z.M., Proll, S., Kasakow, Z., et al. Critical loss of the balance between Th17 and T regulatory cell populations in pathogenic SIV infection. PLoS Pathog., 5(2), 2009, e1000295.
-
(2009)
PLoS Pathog.
, vol.5
, Issue.2
, pp. e1000295
-
-
Favre, D.1
Lederer, S.2
Kanwar, B.3
Ma, Z.M.4
Proll, S.5
Kasakow, Z.6
-
40
-
-
77952977625
-
Tryptophan catabolism by indoleamine 2,3-dioxygenase 1 alters the balance of TH17 to regulatory T cells in HIV disease
-
32ra36 May 19
-
[40] Favre, D., Mold, J., Hunt, P.W., Kanwar, B., Loke, P., Seu, L., et al. Tryptophan catabolism by indoleamine 2,3-dioxygenase 1 alters the balance of TH17 to regulatory T cells in HIV disease. Sci. Transl. Med., 2(32), 2010 May 19 32ra36.
-
(2010)
Sci. Transl. Med.
, vol.2
, Issue.32
-
-
Favre, D.1
Mold, J.2
Hunt, P.W.3
Kanwar, B.4
Loke, P.5
Seu, L.6
-
41
-
-
73249121300
-
Kynurenine pathway metabolites in humans: disease and healthy States
-
Epub 2009 Jan 8
-
[41] Chen, Y., Guillemin, G.J., Kynurenine pathway metabolites in humans: disease and healthy States. Int. J. Tryptophan Res. 2 (2009), 1–19 Epub 2009 Jan 8.
-
(2009)
Int. J. Tryptophan Res.
, vol.2
, pp. 1-19
-
-
Chen, Y.1
Guillemin, G.J.2
-
42
-
-
84936810525
-
Immunosuppressive tryptophan catabolism and gut mucosal dysfunction following early HIV infection
-
Aug 1
-
[42] Jenabian, M.A., El-Far, M., Vyboh, K., Kema, I., Costiniuk, C.T., Thomas, R., et al. Immunosuppressive tryptophan catabolism and gut mucosal dysfunction following early HIV infection. J. Infect. Dis. 212:3 (2015 Aug 1), 355–366.
-
(2015)
J. Infect. Dis.
, vol.212
, Issue.3
, pp. 355-366
-
-
Jenabian, M.A.1
El-Far, M.2
Vyboh, K.3
Kema, I.4
Costiniuk, C.T.5
Thomas, R.6
-
43
-
-
84882664672
-
Tryptophan catabolites from microbiota engage aryl hydrocarbon receptor and balance mucosal reactivity via interleukin-22
-
Aug 22
-
[43] Zelante, T., Iannitti, R.G., Cunha, C., De, L.A., Giovannini, G., Pieraccini, G., et al. Tryptophan catabolites from microbiota engage aryl hydrocarbon receptor and balance mucosal reactivity via interleukin-22. Immunity 39:2 (2013 Aug 22), 372–385.
-
(2013)
Immunity
, vol.39
, Issue.2
, pp. 372-385
-
-
Zelante, T.1
Iannitti, R.G.2
Cunha, C.3
De, L.A.4
Giovannini, G.5
Pieraccini, G.6
-
44
-
-
77958083540
-
Damaged intestinal epithelial integrity linked to microbial translocation in pathogenic simian immunodeficiency virus infections
-
[44] Estes, J.D., Harris, L.D., Klatt, N.R., Tabb, B., Pittaluga, S., Paiardini, M., et al. Damaged intestinal epithelial integrity linked to microbial translocation in pathogenic simian immunodeficiency virus infections. PLoS Pathog., 6(8), 2010, e1001052.
-
(2010)
PLoS Pathog.
, vol.6
, Issue.8
, pp. e1001052
-
-
Estes, J.D.1
Harris, L.D.2
Klatt, N.R.3
Tabb, B.4
Pittaluga, S.5
Paiardini, M.6
-
45
-
-
84859399981
-
Microbial translocation across the GI tract
-
[45] Brenchley, J.M., Douek, D.C., Microbial translocation across the GI tract. Annu. Rev. Immunol., 30, 2012, 149.
-
(2012)
Annu. Rev. Immunol.
, vol.30
, pp. 149
-
-
Brenchley, J.M.1
Douek, D.C.2
-
46
-
-
84866555781
-
Loss of mucosal CD103+ DCs and IL-17+ and IL-22+ lymphocytes is associated with mucosal damage in SIV infection
-
Nov
-
[46] Klatt, N.R., Estes, J.D., Sun, X., Ortiz, A.M., Barber, J.S., Harris, L.D., et al. Loss of mucosal CD103+ DCs and IL-17+ and IL-22+ lymphocytes is associated with mucosal damage in SIV infection. Mucosal Immunol. 5:6 (2012 Nov), 646–657.
-
(2012)
Mucosal Immunol.
, vol.5
, Issue.6
, pp. 646-657
-
-
Klatt, N.R.1
Estes, J.D.2
Sun, X.3
Ortiz, A.M.4
Barber, J.S.5
Harris, L.D.6
-
47
-
-
77954075927
-
Inadequate clearance of translocated bacterial products in HIV-infected humanized mice
-
Apr
-
[47] Hofer, U., Schlaepfer, E., Baenziger, S., Nischang, M., Regenass, S., Schwendener, R., et al. Inadequate clearance of translocated bacterial products in HIV-infected humanized mice. PLoS Pathog., 6(4), 2010 Apr, e1000867.
-
(2010)
PLoS Pathog.
, vol.6
, Issue.4
, pp. e1000867
-
-
Hofer, U.1
Schlaepfer, E.2
Baenziger, S.3
Nischang, M.4
Regenass, S.5
Schwendener, R.6
-
48
-
-
0037322692
-
Defective phagocytosis by human monocyte/macrophages following HIV-1 infection: underlying mechanisms and modulation by adjunctive cytokine therapy
-
Feb
-
[48] Kedzierska, K., Azzam, R., Ellery, P., Mak, J., Jaworowski, A., Crowe, S.M., Defective phagocytosis by human monocyte/macrophages following HIV-1 infection: underlying mechanisms and modulation by adjunctive cytokine therapy. J. Clin. Virol. 26:2 (2003 Feb), 247–263.
-
(2003)
J. Clin. Virol.
, vol.26
, Issue.2
, pp. 247-263
-
-
Kedzierska, K.1
Azzam, R.2
Ellery, P.3
Mak, J.4
Jaworowski, A.5
Crowe, S.M.6
-
49
-
-
84902281875
-
Gut epithelial barrier dysfunction and innate immune activation predict mortality in treated HIV infection
-
Oct 15
-
[49] Hunt, P.W., Sinclair, E., Rodriguez, B., Shive, C., Clagett, B., Funderburg, N., et al. Gut epithelial barrier dysfunction and innate immune activation predict mortality in treated HIV infection. J. Infect. Dis. 210:8 (2014 Oct 15), 1228–1238.
-
(2014)
J. Infect. Dis.
, vol.210
, Issue.8
, pp. 1228-1238
-
-
Hunt, P.W.1
Sinclair, E.2
Rodriguez, B.3
Shive, C.4
Clagett, B.5
Funderburg, N.6
-
50
-
-
84865163472
-
Microbial translocation in HIV infection: causes, consequences and treatment opportunities
-
Sep
-
[50] Sandler, N.G., Douek, D.C., Microbial translocation in HIV infection: causes, consequences and treatment opportunities. Nat. Rev. Microbiol. 10:9 (2012 Sep), 655–666.
-
(2012)
Nat. Rev. Microbiol.
, vol.10
, Issue.9
, pp. 655-666
-
-
Sandler, N.G.1
Douek, D.C.2
-
51
-
-
84900493012
-
An altered intestinal mucosal microbiome in HIV-1 infection is associated with mucosal and systemic immune activation and endotoxemia
-
Jul
-
[51] Dillon, S.M., Lee, E.J., Kotter, C.V., Austin, G.L., Dong, Z., Hecht, D.K., et al. An altered intestinal mucosal microbiome in HIV-1 infection is associated with mucosal and systemic immune activation and endotoxemia. Mucosal Immunol. 7:4 (2014 Jul), 983–994.
-
(2014)
Mucosal Immunol.
, vol.7
, Issue.4
, pp. 983-994
-
-
Dillon, S.M.1
Lee, E.J.2
Kotter, C.V.3
Austin, G.L.4
Dong, Z.5
Hecht, D.K.6
-
52
-
-
84902595278
-
HIV Infection is associated with compositional and functional shifts in the rectal mucosal microbiota
-
[52] McHardy, I.H., Li, X., Tong, M., Ruegger, P., Jacobs, J., Borneman, J., et al. HIV Infection is associated with compositional and functional shifts in the rectal mucosal microbiota. Microbiome, 1(1), 2013, 26.
-
(2013)
Microbiome
, vol.1
, Issue.1
, pp. 26
-
-
McHardy, I.H.1
Li, X.2
Tong, M.3
Ruegger, P.4
Jacobs, J.5
Borneman, J.6
-
53
-
-
84880540665
-
Dysbiosis of the gut microbiota is associated with HIV disease progression and tryptophan catabolism
-
193ra91
-
[53] Vujkovic-Cvijin, I., Dunham, R.M., Iwai, S., Maher, M.C., Albright, R.G., Broadhurst, M.J., et al. Dysbiosis of the gut microbiota is associated with HIV disease progression and tryptophan catabolism. Sci. Transl. Med., 5(193), 2013 193ra91.
-
(2013)
Sci. Transl. Med.
, vol.5
, Issue.193
-
-
Vujkovic-Cvijin, I.1
Dunham, R.M.2
Iwai, S.3
Maher, M.C.4
Albright, R.G.5
Broadhurst, M.J.6
-
54
-
-
84898003314
-
Anal microbiota profiles in HIV-positive and HIV-negative MSM
-
Mar 13
-
[54] Yu, G., Fadrosh, D., Ma, B., Ravel, J., Goedert, J.J., Anal microbiota profiles in HIV-positive and HIV-negative MSM. AIDS 28:5 (2014 Mar 13), 753–760.
-
(2014)
AIDS
, vol.28
, Issue.5
, pp. 753-760
-
-
Yu, G.1
Fadrosh, D.2
Ma, B.3
Ravel, J.4
Goedert, J.J.5
-
55
-
-
84883855720
-
Alterations in the gut microbiota associated with HIV-1 infection
-
Sep 11
-
[55] Lozupone, C.A., Li, M., Campbell, T.B., Flores, S.C., Linderman, D., Gebert, M.J., et al. Alterations in the gut microbiota associated with HIV-1 infection. Cell Host Microbe 14:3 (2013 Sep 11), 329–339.
-
(2013)
Cell Host Microbe
, vol.14
, Issue.3
, pp. 329-339
-
-
Lozupone, C.A.1
Li, M.2
Campbell, T.B.3
Flores, S.C.4
Linderman, D.5
Gebert, M.J.6
-
56
-
-
84895733084
-
A compositional look at the human gastrointestinal microbiome and immune activation parameters in HIV infected subjects
-
Feb
-
[56] Mutlu, E.A., Keshavarzian, A., Losurdo, J., Swanson, G., Siewe, B., Forsyth, C., et al. A compositional look at the human gastrointestinal microbiome and immune activation parameters in HIV infected subjects. PLoS Pathog., 10(2), 2014 Feb, e1003829.
-
(2014)
PLoS Pathog.
, vol.10
, Issue.2
, pp. e1003829
-
-
Mutlu, E.A.1
Keshavarzian, A.2
Losurdo, J.3
Swanson, G.4
Siewe, B.5
Forsyth, C.6
-
57
-
-
84922414182
-
Intestinal microbiota, microbial translocation, and systemic inflammation in chronic HIV infection
-
Jan 1
-
[57] Dinh, D.M., Volpe, G.E., Duffalo, C., Bhalchandra, S., Tai, A.K., Kane, A.V., et al. Intestinal microbiota, microbial translocation, and systemic inflammation in chronic HIV infection. J. Infect. Dis. 211:1 (2015 Jan 1), 19–27.
-
(2015)
J. Infect. Dis.
, vol.211
, Issue.1
, pp. 19-27
-
-
Dinh, D.M.1
Volpe, G.E.2
Duffalo, C.3
Bhalchandra, S.4
Tai, A.K.5
Kane, A.V.6
-
58
-
-
84947865190
-
Gut microbiota diversity predicts immune status in HIV-1 infection
-
Nov 28
-
[58] Nowak, P., Troseid, M., Avershina, E., Barqasho, B., Neogi, U., Holm, K., et al. Gut microbiota diversity predicts immune status in HIV-1 infection. AIDS 29:18 (2015 Nov 28), 2409–2418.
-
(2015)
AIDS
, vol.29
, Issue.18
, pp. 2409-2418
-
-
Nowak, P.1
Troseid, M.2
Avershina, E.3
Barqasho, B.4
Neogi, U.5
Holm, K.6
-
59
-
-
84880924387
-
Immune status, antibiotic medication and pH are associated with changes in the stomach fluid microbiota
-
[59] von Rosenvinge, E.C., Song, Y., White, J.R., Maddox, C., Blanchard, T., Fricke, W.F., Immune status, antibiotic medication and pH are associated with changes in the stomach fluid microbiota. ISME J. 7:7 (2013), 1354–1366.
-
(2013)
ISME J.
, vol.7
, Issue.7
, pp. 1354-1366
-
-
von Rosenvinge, E.C.1
Song, Y.2
White, J.R.3
Maddox, C.4
Blanchard, T.5
Fricke, W.F.6
-
60
-
-
35348857386
-
Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases
-
[60] Frank, D.N., Amand, A.L.S., Feldman, R.A., Boedeker, E.C., Harpaz, N., Pace, N.R., Molecular-phylogenetic characterization of microbial community imbalances in human inflammatory bowel diseases. Proc. Natl. Acad. Sci. U. S. A. 104:34 (2007), 13780–13785.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, Issue.34
, pp. 13780-13785
-
-
Frank, D.N.1
Amand, A.L.S.2
Feldman, R.A.3
Boedeker, E.C.4
Harpaz, N.5
Pace, N.R.6
-
61
-
-
33645019411
-
Specificities of the fecal microbiota in inflammatory bowel disease
-
[61] Sokol, H., Seksik, P., Rigottier-Gois, L., Lay, C., Lepage, P., Podglajen, I., et al. Specificities of the fecal microbiota in inflammatory bowel disease. Inflamm. Bowel Dis. 12:2 (2006), 106–111.
-
(2006)
Inflamm. Bowel Dis.
, vol.12
, Issue.2
, pp. 106-111
-
-
Sokol, H.1
Seksik, P.2
Rigottier-Gois, L.3
Lay, C.4
Lepage, P.5
Podglajen, I.6
-
62
-
-
77949393654
-
Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults
-
[62] Larsen, N., Vogensen, F.K., van den Berg, F.W., Nielsen, D.S., Andreasen, A.S., Pedersen, B.K., et al. Gut microbiota in human adults with type 2 diabetes differs from non-diabetic adults. PloS one, 5(2), 2010, e9085.
-
(2010)
PloS one
, vol.5
, Issue.2
, pp. e9085
-
-
Larsen, N.1
Vogensen, F.K.2
van den Berg, F.W.3
Nielsen, D.S.4
Andreasen, A.S.5
Pedersen, B.K.6
-
63
-
-
58749112734
-
A core gut microbiome in obese and lean twins
-
Jan 22
-
[63] Turnbaugh, P.J., Hamady, M., Yatsunenko, T., Cantarel, B.L., Duncan, A., Ley, R.E., et al. A core gut microbiome in obese and lean twins. Nature 457:7228 (2009 Jan 22), 480–484.
-
(2009)
Nature
, vol.457
, Issue.7228
, pp. 480-484
-
-
Turnbaugh, P.J.1
Hamady, M.2
Yatsunenko, T.3
Cantarel, B.L.4
Duncan, A.5
Ley, R.E.6
-
64
-
-
39349107697
-
Decreased diversity of the fecal microbiome in recurrent Clostridium difficile−associated diarrhea
-
[64] Chang, J.Y., Antonopoulos, D.A., Kalra, A., Tonelli, A., Khalife, W.T., Schmidt, T.M., et al. Decreased diversity of the fecal microbiome in recurrent Clostridium difficile−associated diarrhea. J. Infect. Dis. 197:3 (2008), 435–438.
-
(2008)
J. Infect. Dis.
, vol.197
, Issue.3
, pp. 435-438
-
-
Chang, J.Y.1
Antonopoulos, D.A.2
Kalra, A.3
Tonelli, A.4
Khalife, W.T.5
Schmidt, T.M.6
-
65
-
-
79957514958
-
The intestinal microbiota plays a role in Salmonella-induced colitis independent of pathogen colonization
-
[65] Ferreira, R.B., Gill, N., Willing, B.P., Antunes, L.C., Russell, S.L., Croxen, M.A., et al. The intestinal microbiota plays a role in Salmonella-induced colitis independent of pathogen colonization. PLoS One, 6(5), 2011, e20338.
-
(2011)
PLoS One
, vol.6
, Issue.5
, pp. e20338
-
-
Ferreira, R.B.1
Gill, N.2
Willing, B.P.3
Antunes, L.C.4
Russell, S.L.5
Croxen, M.A.6
-
66
-
-
84908043065
-
Intestinal permeability, gut-bacterial dysbiosis, and behavioral markers of alcohol-dependence severity
-
Oct 21
-
[66] Leclercq, S., Matamoros, S., Cani, P.D., Neyrinck, A.M., Jamar, F., Starkel, P., et al. Intestinal permeability, gut-bacterial dysbiosis, and behavioral markers of alcohol-dependence severity. Proc. Natl. Acad. Sci. U. S. A. 111:42 (2014 Oct 21), E4485–E4493.
-
(2014)
Proc. Natl. Acad. Sci. U. S. A.
, vol.111
, Issue.42
, pp. E4485-E4493
-
-
Leclercq, S.1
Matamoros, S.2
Cani, P.D.3
Neyrinck, A.M.4
Jamar, F.5
Starkel, P.6
-
67
-
-
84953291096
-
Gut dendritic cell activation links an altered colonic microbiome to mucosal and systemic T-cell activation in untreated HIV-1 infection
-
Apr 29
-
[67] Dillon, S.M., Lee, E.J., Kotter, C.V., Austin, G.L., Gianella, S., Siewe, B., et al. Gut dendritic cell activation links an altered colonic microbiome to mucosal and systemic T-cell activation in untreated HIV-1 infection. Mucosal Immunol. 9:1 (2015 Apr 29), 24–37.
-
(2015)
Mucosal Immunol.
, vol.9
, Issue.1
, pp. 24-37
-
-
Dillon, S.M.1
Lee, E.J.2
Kotter, C.V.3
Austin, G.L.4
Gianella, S.5
Siewe, B.6
-
68
-
-
55949124035
-
Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients
-
[68] Sokol, H., B+, Pigneur, Watterlot, L., Lakhdari, O., Bermúdez-Humarán, L.G., Gratadoux, J.J., et al. Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients. Proc. Natl. Acad. Sci. U. S. A. 105:43 (2008), 16731–16736.
-
(2008)
Proc. Natl. Acad. Sci. U. S. A.
, vol.105
, Issue.43
, pp. 16731-16736
-
-
Sokol, H.1
B+, P.2
Watterlot, L.3
Lakhdari, O.4
Bermúdez-Humarán, L.G.5
Gratadoux, J.J.6
-
69
-
-
84858153337
-
Role of the microbiota in inflammatory bowel diseases
-
May
-
[69] Nagalingam, N.A., Lynch, S.V., Role of the microbiota in inflammatory bowel diseases. Inflamm. Bowel Dis. 18:5 (2012 May), 968–984.
-
(2012)
Inflamm. Bowel Dis.
, vol.18
, Issue.5
, pp. 968-984
-
-
Nagalingam, N.A.1
Lynch, S.V.2
-
70
-
-
34447104397
-
The fecal microbiota of irritable bowel syndrome patients differs significantly from that of healthy subjects
-
Jul
-
[70] Kassinen, A., Krogius-Kurikka, L., Makivuokko, H., Rinttila, T., Paulin, L., Corander, J., et al. The fecal microbiota of irritable bowel syndrome patients differs significantly from that of healthy subjects. Gastroenterology 133:1 (2007 Jul), 24–33.
-
(2007)
Gastroenterology
, vol.133
, Issue.1
, pp. 24-33
-
-
Kassinen, A.1
Krogius-Kurikka, L.2
Makivuokko, H.3
Rinttila, T.4
Paulin, L.5
Corander, J.6
-
71
-
-
84882779621
-
Intestinal dysbiosis and depletion of butyrogenic bacteria in Clostridium difficile infection and nosocomial diarrhea
-
Sep
-
[71] Antharam, V.C., Li, E.C., Ishmael, A., Sharma, A., Mai, V., Rand, K.H., et al. Intestinal dysbiosis and depletion of butyrogenic bacteria in Clostridium difficile infection and nosocomial diarrhea. J. Clin. Microbiol. 51:9 (2013 Sep), 2884–2892.
-
(2013)
J. Clin. Microbiol.
, vol.51
, Issue.9
, pp. 2884-2892
-
-
Antharam, V.C.1
Li, E.C.2
Ishmael, A.3
Sharma, A.4
Mai, V.5
Rand, K.H.6
-
72
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
Oct 7
-
[72] Wu, G.D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.Y., Keilbaugh, S.A., et al. Linking long-term dietary patterns with gut microbial enterotypes. Science 334:6052 (2011 Oct 7), 105–108.
-
(2011)
Science
, vol.334
, Issue.6052
, pp. 105-108
-
-
Wu, G.D.1
Chen, J.2
Hoffmann, C.3
Bittinger, K.4
Chen, Y.Y.5
Keilbaugh, S.A.6
-
73
-
-
85003054745
-
Altered gut microbial energy and metabolism in children with non-alcoholic fatty liver disease
-
Feb
-
[73] Michail, S., Lin, M., Frey, M.R., Fanter, R., Paliy, O., Hilbush, B., et al. Altered gut microbial energy and metabolism in children with non-alcoholic fatty liver disease. FEMS Microbiol. Ecol. 91:2 (2015 Feb), 1–9.
-
(2015)
FEMS Microbiol. Ecol.
, vol.91
, Issue.2
, pp. 1-9
-
-
Michail, S.1
Lin, M.2
Frey, M.R.3
Fanter, R.4
Paliy, O.5
Hilbush, B.6
-
74
-
-
84937576853
-
Dysbiosis gut microbiota associated with inflammation and impaired mucosal immune function in intestine of humans with non-alcoholic fatty liver disease
-
[74] Jiang, W., Wu, N., Wang, X., Chi, Y., Zhang, Y., Qiu, X., et al. Dysbiosis gut microbiota associated with inflammation and impaired mucosal immune function in intestine of humans with non-alcoholic fatty liver disease. Sci. Rep., 5, 2015, 8096.
-
(2015)
Sci. Rep.
, vol.5
, pp. 8096
-
-
Jiang, W.1
Wu, N.2
Wang, X.3
Chi, Y.4
Zhang, Y.5
Qiu, X.6
-
75
-
-
33646241058
-
Prevalence of Bacteroides and Prevotella spp. in ulcerative colitis
-
May
-
[75] Lucke, K., Miehlke, S., Jacobs, E., Schuppler, M., Prevalence of Bacteroides and Prevotella spp. in ulcerative colitis. J. Med. Microbiol. 55:Pt 5 (2006 May), 617–624.
-
(2006)
J. Med. Microbiol.
, vol.55
, pp. 617-624
-
-
Lucke, K.1
Miehlke, S.2
Jacobs, E.3
Schuppler, M.4
-
76
-
-
0034284024
-
Prevotella enzymes involved in mucin oligosaccharide degradation and evidence for a small operon of genes expressed during growth on mucin
-
Sep 1
-
[76] Wright, D.P., Rosendale, D.I., Robertson, A.M., Prevotella enzymes involved in mucin oligosaccharide degradation and evidence for a small operon of genes expressed during growth on mucin. FEMS Microbiol. Lett. 190:1 (2000 Sep 1), 73–79.
-
(2000)
FEMS Microbiol. Lett.
, vol.190
, Issue.1
, pp. 73-79
-
-
Wright, D.P.1
Rosendale, D.I.2
Robertson, A.M.3
-
77
-
-
77954738601
-
Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota
-
Jul 6
-
[77] Round, J.L., Mazmanian, S.K., Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota. Proc. Natl. Acad. Sci. U. S. A. 107:27 (2010 Jul 6), 12204–12209.
-
(2010)
Proc. Natl. Acad. Sci. U. S. A.
, vol.107
, Issue.27
, pp. 12204-12209
-
-
Round, J.L.1
Mazmanian, S.K.2
-
78
-
-
84893370250
-
Identifying gut microbe-host phenotype relationships using combinatorial communities in gnotobiotic mice
-
220ra11 Jan 22
-
[78] Faith, J.J., Ahern, P.P., Ridaura, V.K., Cheng, J., Gordon, J.I., Identifying gut microbe-host phenotype relationships using combinatorial communities in gnotobiotic mice. Sci. Transl. Med., 6(220), 2014 Jan 22 220ra11.
-
(2014)
Sci. Transl. Med.
, vol.6
, Issue.220
-
-
Faith, J.J.1
Ahern, P.P.2
Ridaura, V.K.3
Cheng, J.4
Gordon, J.I.5
-
79
-
-
78650803767
-
Oral administration of Parabacteroides distasonis antigens attenuates experimental murine colitis through modulation of immunity and microbiota composition
-
Feb
-
[79] Kverka, M., Zakostelska, Z., Klimesova, K., Sokol, D., Hudcovic, T., Hrncir, T., et al. Oral administration of Parabacteroides distasonis antigens attenuates experimental murine colitis through modulation of immunity and microbiota composition. Clin. Exp. Immunol. 163:2 (2011 Feb), 250–259.
-
(2011)
Clin. Exp. Immunol.
, vol.163
, Issue.2
, pp. 250-259
-
-
Kverka, M.1
Zakostelska, Z.2
Klimesova, K.3
Sokol, D.4
Hudcovic, T.5
Hrncir, T.6
-
80
-
-
80054020840
-
Peripheral education of the immune system by colonic commensal microbiota
-
Oct 13
-
[80] Lathrop, S.K., Bloom, S.M., Rao, S.M., Nutsch, K., Lio, C.W., Santacruz, N., et al. Peripheral education of the immune system by colonic commensal microbiota. Nature 478:7368 (2011 Oct 13), 250–254.
-
(2011)
Nature
, vol.478
, Issue.7368
, pp. 250-254
-
-
Lathrop, S.K.1
Bloom, S.M.2
Rao, S.M.3
Nutsch, K.4
Lio, C.W.5
Santacruz, N.6
-
81
-
-
84924375353
-
HIV-induced alteration in gut microbiota: Driving factors, consequences, and effects of antiretroviral therapy
-
Jul 1
-
[81] Lozupone, C.A., Rhodes, M.E., Neff, C.P., Fontenot, A.P., Campbell, T.B., Palmer, B.E., HIV-induced alteration in gut microbiota: Driving factors, consequences, and effects of antiretroviral therapy. Gut Microbes 5:4 (2014 Jul 1), 562–570.
-
(2014)
Gut Microbes
, vol.5
, Issue.4
, pp. 562-570
-
-
Lozupone, C.A.1
Rhodes, M.E.2
Neff, C.P.3
Fontenot, A.P.4
Campbell, T.B.5
Palmer, B.E.6
-
82
-
-
85003917389
-
IL-10 inducing bacteria are preferentially depleted in the gut of HIV infected subjects
-
[82] Neff, C., Rhodes, M., Donnely, J., Schneider, J., Mazmanian, S., Lozupone, C., et al. IL-10 inducing bacteria are preferentially depleted in the gut of HIV infected subjects. J. Immunol., 194, 2015.
-
(2015)
J. Immunol.
, vol.194
-
-
Neff, C.1
Rhodes, M.2
Donnely, J.3
Schneider, J.4
Mazmanian, S.5
Lozupone, C.6
-
83
-
-
53549129725
-
Microbial translocation is associated with sustained failure in CD4+ T-cell reconstitution in HIV-infected patients on long-term highly active antiretroviral therapy
-
Oct 1
-
[83] Marchetti, G., Bellistri, G.M., Borghi, E., Tincati, C., Ferramosca, S., La, F.M., et al. Microbial translocation is associated with sustained failure in CD4+ T-cell reconstitution in HIV-infected patients on long-term highly active antiretroviral therapy. Aids 22:15 (2008 Oct 1), 2035–2038.
-
(2008)
Aids
, vol.22
, Issue.15
, pp. 2035-2038
-
-
Marchetti, G.1
Bellistri, G.M.2
Borghi, E.3
Tincati, C.4
Ferramosca, S.5
La, F.M.6
-
84
-
-
77955013082
-
C-reactive protein levels increase during HIV-1 disease progression in Rakai, Uganda, despite the absence of microbial translocation
-
Aug
-
[84] Redd, A.D., Eaton, K.P., Kong, X., Laeyendecker, O., Lutalo, T., Wawer, M.J., et al. C-reactive protein levels increase during HIV-1 disease progression in Rakai, Uganda, despite the absence of microbial translocation. J. Acquir Immune Defic. Syndr. 54:5 (2010 Aug), 556–559.
-
(2010)
J. Acquir Immune Defic. Syndr.
, vol.54
, Issue.5
, pp. 556-559
-
-
Redd, A.D.1
Eaton, K.P.2
Kong, X.3
Laeyendecker, O.4
Lutalo, T.5
Wawer, M.J.6
-
85
-
-
77957157893
-
Gut inflammation provides a respiratory electron acceptor for Salmonella
-
Sep 23
-
[85] Winter, S.E., Thiennimitr, P., Winter, M.G., Butler, B.P., Huseby, D.L., Crawford, R.W., et al. Gut inflammation provides a respiratory electron acceptor for Salmonella. Nature 467:7314 (2010 Sep 23), 426–429.
-
(2010)
Nature
, vol.467
, Issue.7314
, pp. 426-429
-
-
Winter, S.E.1
Thiennimitr, P.2
Winter, M.G.3
Butler, B.P.4
Huseby, D.L.5
Crawford, R.W.6
-
86
-
-
84873513423
-
Host-derived nitrate boosts growth of E. coli in the inflamed gut
-
Feb 8
-
[86] Winter, S.E., Winter, M.G., Xavier, M.N., Thiennimitr, P., Poon, V., Keestra, A.M., et al. Host-derived nitrate boosts growth of E. coli in the inflamed gut. Science 339:6120 (2013 Feb 8), 708–711.
-
(2013)
Science
, vol.339
, Issue.6120
, pp. 708-711
-
-
Winter, S.E.1
Winter, M.G.2
Xavier, M.N.3
Thiennimitr, P.4
Poon, V.5
Keestra, A.M.6
-
87
-
-
84863621018
-
HIV-1 infection of human intestinal lamina propria CD4+ T cells in vitro is enhanced by exposure to commensal Escherichia coli
-
Jul 15
-
[87] Dillon, S.M., Manuzak, J.A., Leone, A.K., Lee, E.J., Rogers, L.M., McCarter, M.D., et al. HIV-1 infection of human intestinal lamina propria CD4+ T cells in vitro is enhanced by exposure to commensal Escherichia coli. J. Immunol. 189:2 (2012 Jul 15), 885–896.
-
(2012)
J. Immunol.
, vol.189
, Issue.2
, pp. 885-896
-
-
Dillon, S.M.1
Manuzak, J.A.2
Leone, A.K.3
Lee, E.J.4
Rogers, L.M.5
McCarter, M.D.6
-
88
-
-
84878946480
-
Markers of microbial translocation predict hypertension in HIV-infected individuals
-
Jul
-
[88] Manner, I.W., Baekken, M., Kvale, D., Oektedalen, O., Pedersen, M., Nielsen, S.D., et al. Markers of microbial translocation predict hypertension in HIV-infected individuals. HIV Med. 14:6 (2013 Jul), 354–361.
-
(2013)
HIV Med.
, vol.14
, Issue.6
, pp. 354-361
-
-
Manner, I.W.1
Baekken, M.2
Kvale, D.3
Oektedalen, O.4
Pedersen, M.5
Nielsen, S.D.6
-
89
-
-
38949134533
-
Early impairment of gut function and gut flora supporting a role for alteration of gastrointestinal mucosa in human immunodeficiency virus pathogenesis
-
[89] Gori, A., Tincati, C., Rizzardini, G., Torti, C., Quirino, T., Haarman, M., et al. Early impairment of gut function and gut flora supporting a role for alteration of gastrointestinal mucosa in human immunodeficiency virus pathogenesis. J. Clin. Microbiol. 46:2 (2008), 757–758.
-
(2008)
J. Clin. Microbiol.
, vol.46
, Issue.2
, pp. 757-758
-
-
Gori, A.1
Tincati, C.2
Rizzardini, G.3
Torti, C.4
Quirino, T.5
Haarman, M.6
-
90
-
-
84884379881
-
Gut Lactobacillales are associated with higher CD4 and less microbial translocation during HIV infection
-
Jul 31
-
[90] Perez-Santiago, J., Gianella, S., Massanella, M., Spina, C.A., Karris, M.Y., Var, S.R., et al. Gut Lactobacillales are associated with higher CD4 and less microbial translocation during HIV infection. AIDS 27:12 (2013 Jul 31), 1921–1931.
-
(2013)
AIDS
, vol.27
, Issue.12
, pp. 1921-1931
-
-
Perez-Santiago, J.1
Gianella, S.2
Massanella, M.3
Spina, C.A.4
Karris, M.Y.5
Var, S.R.6
-
91
-
-
84945897500
-
Reduced levels of D-dimer and changes in gut microbiota composition after probiotic intervention in HIV-infected individuals on stable ART
-
Dec 1
-
[91] Stiksrud, B., Nowak, P., Nwosu, F.C., Kvale, D., Thalme, A., Sonnerborg, A., et al. Reduced levels of D-dimer and changes in gut microbiota composition after probiotic intervention in HIV-infected individuals on stable ART. J. Acquir Immune Defic. Syndr. 70:4 (2015 Dec 1), 329–337.
-
(2015)
J. Acquir Immune Defic. Syndr.
, vol.70
, Issue.4
, pp. 329-337
-
-
Stiksrud, B.1
Nowak, P.2
Nwosu, F.C.3
Kvale, D.4
Thalme, A.5
Sonnerborg, A.6
-
92
-
-
84945545407
-
Probiotics reduce inflammation in antiretroviral treated, HIV-infected individuals: results of the “Probio-HIV” clinical trial
-
[92] d'Ettorre, G., Ceccarelli, G., Giustini, N., Serafino, S., Calantone, N., De, G.G., et al. Probiotics reduce inflammation in antiretroviral treated, HIV-infected individuals: results of the “Probio-HIV” clinical trial. PLoS One, 10(9), 2015, e0137200.
-
(2015)
PLoS One
, vol.10
, Issue.9
, pp. e0137200
-
-
d'Ettorre, G.1
Ceccarelli, G.2
Giustini, N.3
Serafino, S.4
Calantone, N.5
De, G.G.6
|