In silico screening of the protein structure repertoire and of protein families

Chemogenomics: Knowledge-Based Approaches to Drug Discovery

Volumn , Issue , 2006, Pages 109-132

  Rognan, Didier ^a  

^a CNRS   (France)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84967540989     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1142/9781860948114_0005     Document Type: Chapter

References (46)

1. Schoichet BK. (2004) Nature 862.
2. Bajorath J. (2002) Nat. Rev. Drug Discov. 882.
3. Kitchen DB, Decornez H, Furr JR, Bajorath J. (2004) Nat. Rev. Drug Discov. 935.
4. Lipinski C, Hopkins A. (2004) Nature 855.
5. Attwood TK, Bradley P, Flower DR, et al. (2003) Nucl. Acids Res. 400.
6. Lichtare O, Bourne H, Cohen F. (1996) J. Mol. Biol. 342.
7. Berman HM, Westbrook J, Feng Z, et al. (2000) Nucl. Acids Res. 235.
8. Hendlich M, Bergner A, Gunther J, Klebe G. (2003) J. Mol. Biol. 607.
9. Golovin A, Dimitropoulos D, Oldfield T, et al. (2005) 190.
10. Roche O, Kiyama R, Brooks CL. III. (2001) J. Med. Chem. 3592.
11. Kramer B, Rarey M, Lengauer T. (1999) Proteins 228.
12. Nissink WM, Murray C, Hartshorn M, et al. (2002) Proteins 457.
13. Kitajim K, Ahmad S, Selvaraj S. (2002) Genome Informatics 498.
14. Stuart AC, Ilyin VA, Sali A. (2002) Bioinformatics 18.
15. Paul N, Bret G, Kellenberger E, et al. (2004) Proteins 671.
16. Laskowski RA, Chistyakov VV, Thornton JM. (2005) Nucl. Acids Res. D26.
17. Apweiler R, Bairoch A, Wu CH, et al. (2004) Nucl. Acids Res. D115.
18. Bairoch A. (2000) Nucl. Acids Res. 304.
19. Schwalbe H, Wess G. (2002) Chem Bio Chem 915.
20. Wise A, Gearing K, Rees S. (2002) Drug Discov. Today 235.
21. Venter JC, et al. (2001) Science 291.
22. Palczewski K, Kumasaka T, Hori T. (2000) Science 289.
23. Petrel C, Kessler A, Maslah F. (2003) J. Biol. Chem. 49487.
24. Malherbe P, Kratochvwil N, Knoflach F. (2003) J. Biol. Chem. 8340.
25. Varady J, Wu X, Fang X, et al. (2003) J. Med. Chem. 4377.
26. Evers A, Klebe G. (2004) J. Med. Chem. 5381.
27. Becker OM, Marantz Y, Shacham S, et al. (2004) Proc. Natl. Acad. Sci. USA 11304.
28. Evers A, Klabunde T. (2005) J. Med. Chem. 1088.
29. Bissantz C, Logean A, Rognan D. (2004) J. Chem. Info. Comput. Sci. 1162.
30. Surgand JS, Rodrigo J, Kellenberger E, Rognan D. Proteins (in press).
31. Fredriksson R, Lagerstrom MC, Lundin LG, Schioth HB. (2003) Mol. Pharmacol. 1256.
32. Segalat L. (personal communication).
33. Bondensgaard K, Ankersen M, Thogersen H, et al. (2004) J. Med. Chem. 888.
34. http://www.ismc2004.dk/index.php/Session_3D__A_physicogenetic_m/121/0/
35. Ji H, Leung M, Zhang Y. (1994) J. Biol. Chem. 16533.
36. Smith RG, Cheng K, Schoen WR, et al. (1993) Science 1640.
37. Reiter LA, Koch K, Piscopio AD, et al. (1998) Bioorg. Med. Chem. Lett. 1781.
38. Halperin I, Ma B, Wolfson H, Nussinov R. (2002) Proteins 409.
39. Evers A, Klebe G. (2004) Angew. Chem. Intl. Ed. Engl. 248.
40. Verdonk ML, Cole JC, Hartshorn MJ, et al. (2003) Proteins 609.
41. Kellenberger E, Rodrigo J, Muller P, Rognan D. (2004) Proteins 225.
42. Muller P, Lena G, Bezzine S, et al. J. Med. Chem. (submitted).
43. Bissantz C, Bernard P, Hibert M, Rognan D. (2003) Proteins 5.
44. He W, Miao FJ, Lin DC. (2004) Nature 188.
45. Jambon M, Imberty A, Deleage G, Geourjon C. (2003) Proteins 137.
46. Weber A, Casini A, Heine A, et al. (2004) J. Med. Chem. 550.